mRNA_M-pyrifera_M_contig68733.16524.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig68733.16524.1 vs. uniprot
Match: A0A7S0PFY5_CAFRO (Hypothetical protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0PFY5_CAFRO) HSP 1 Score: 117 bits (292), Expect = 7.070e-31 Identity = 55/83 (66.27%), Postives = 72/83 (86.75%), Query Frame = 1
Query: 1 LVRLIPLNCPGLRVELVVALFPKIVDLPEFDRVLFALTGPERRIVVRRLGRLNFFDPRRADGDYDLDLSVWEDRVLASILAQL 249
+VR +PL+ PGLRVE+ V+LFP+++DL EFDRVLFAL+GPER+ VVRRLG LN ++P R DGDY LDL VWE+R++A++LAQL
Sbjct: 75 IVRALPLSVPGLRVEVAVSLFPRVLDLAEFDRVLFALSGPERKRVVRRLGWLNLWNPMRPDGDYVLDLRVWEERMMATLLAQL 157
BLAST of mRNA_M-pyrifera_M_contig68733.16524.1 vs. uniprot
Match: A0A7S0PGY1_CAFRO (Hypothetical protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0PGY1_CAFRO) HSP 1 Score: 117 bits (292), Expect = 7.440e-30 Identity = 55/83 (66.27%), Postives = 72/83 (86.75%), Query Frame = 1
Query: 1 LVRLIPLNCPGLRVELVVALFPKIVDLPEFDRVLFALTGPERRIVVRRLGRLNFFDPRRADGDYDLDLSVWEDRVLASILAQL 249
+VR +PL+ PGLRVE+ V+LFP+++DL EFDRVLFAL+GPER+ VVRRLG LN ++P R DGDY LDL VWE+R++A++LAQL
Sbjct: 187 IVRALPLSVPGLRVEVAVSLFPRVLDLAEFDRVLFALSGPERKRVVRRLGWLNLWNPMRPDGDYVLDLRVWEERMMATLLAQL 269
BLAST of mRNA_M-pyrifera_M_contig68733.16524.1 vs. uniprot
Match: A0A5A8CDT9_CAFRO (Uncharacterized protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CDT9_CAFRO) HSP 1 Score: 117 bits (292), Expect = 1.130e-28 Identity = 55/83 (66.27%), Postives = 72/83 (86.75%), Query Frame = 1
Query: 1 LVRLIPLNCPGLRVELVVALFPKIVDLPEFDRVLFALTGPERRIVVRRLGRLNFFDPRRADGDYDLDLSVWEDRVLASILAQL 249
+VR +PL+ PGLRVE+ V+LFP+++DL EFDRVLFAL+GPER+ VVRRLG LN ++P R DGDY LDL VWE+R++A++LAQL
Sbjct: 805 IVRALPLSVPGLRVEVAVSLFPRVLDLAEFDRVLFALSGPERKRVVRRLGWLNLWNPMRPDGDYVLDLRVWEERMMATLLAQL 887
BLAST of mRNA_M-pyrifera_M_contig68733.16524.1 vs. uniprot
Match: A0A7S3HRF6_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HRF6_9STRA) HSP 1 Score: 62.0 bits (149), Expect = 2.360e-9 Identity = 32/71 (45.07%), Postives = 41/71 (57.75%), Query Frame = 1
Query: 37 RVELVVALFPKIVDLPEFDRVLFALTGPERRIVVRRLGRLNFFDPRRADGDYDLDLSVWEDRVLASILAQL 249
RVELVV LF +I+DL F VL L E + R+G LNFF+P G LD+S W++R L +L L
Sbjct: 40 RVELVVKLFDRIIDLHNFQFVLMHLNAHEHAAICARIGYLNFFNPSFVTGGIQLDISRWDERQLVKMLIHL 110
BLAST of mRNA_M-pyrifera_M_contig68733.16524.1 vs. uniprot
Match: A0A7S3GN99_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GN99_9STRA) HSP 1 Score: 56.6 bits (135), Expect = 2.360e-8 Identity = 30/71 (42.25%), Postives = 46/71 (64.79%), Query Frame = 1
Query: 37 RVELVVALFPKIVDLPEFDRVLFALTGPERRIVVRRLGRLNFFDPRRADGDYDLDLSVWEDRVLASILAQL 249
RV+L+VALF ++VDL F+ V+ L E + RLG LN ++P + +G ++LD+S E+RV+A L L
Sbjct: 34 RVDLIVALFGRVVDLHNFEFVMKVLAPSEVACLYCRLGWLNLYNPCKPEGAWELDMSRREERVIAKTLCVL 104
BLAST of mRNA_M-pyrifera_M_contig68733.16524.1 vs. uniprot
Match: A0A482T4Q9_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T4Q9_9ARCH) HSP 1 Score: 58.9 bits (141), Expect = 2.890e-8 Identity = 28/76 (36.84%), Postives = 43/76 (56.58%), Query Frame = 1
Query: 22 NCPGLRVELVVALFPKIVDLPEFDRVLFALTGPERRIVVRRLGRLNFFDPRRADGDYDLDLSVWEDRVLASILAQL 249
N RVELVV +F +I+DL F+ +L L E+ + R+G LN F+P + +G DL+ WE+R L + +
Sbjct: 105 NIGSYRVELVVMVFDRILDLQNFELILMMLNAEEQAALYARIGVLNVFNPSKPEGARSFDLTRWEERQLVKMFVHM 180
BLAST of mRNA_M-pyrifera_M_contig68733.16524.1 vs. uniprot
Match: A0A7S1XZJ5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XZJ5_9STRA) HSP 1 Score: 58.5 bits (140), Expect = 4.110e-8 Identity = 31/71 (43.66%), Postives = 43/71 (60.56%), Query Frame = 1
Query: 37 RVELVVALFPKIVDLPEFDRVLFALTGPERRIVVRRLGRLNFFDPRRADGDYDLDLSVWEDRVLASILAQL 249
RV+L++ LF +IVDL FD ++ L E R ++ RLG LN +P + DG Y LDL E R L +L +L
Sbjct: 651 RVQLIINLFSRIVDLENFDVIMTTLDDDEERELLHRLGGLNLKNPMKPDGFYFLDLRSREQRELCKMLVRL 721
BLAST of mRNA_M-pyrifera_M_contig68733.16524.1 vs. uniprot
Match: A0A7S3HDS8_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HDS8_9STRA) HSP 1 Score: 53.9 bits (128), Expect = 1.770e-6 Identity = 31/71 (43.66%), Postives = 46/71 (64.79%), Query Frame = 1
Query: 37 RVELVVALFPKIVDLPEFDRVLFALTGPERRIVVRRLGRLNFFDPRRADGDYDLDLSVWEDRVLASILAQL 249
RVEL+V+L+ ++VD+ D VL L E +++ RLG LN ++P +A+G LDLS E+R LA I+ L
Sbjct: 890 RVELIVSLYTRVVDVINMDFVLKELESTEYAMLLFRLGWLNIWNPIKAEGRVCLDLSRREERQLARIMLVL 960
BLAST of mRNA_M-pyrifera_M_contig68733.16524.1 vs. uniprot
Match: A0A329RPJ7_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329RPJ7_9STRA) HSP 1 Score: 52.8 bits (125), Expect = 4.540e-6 Identity = 29/77 (37.66%), Postives = 44/77 (57.14%), Query Frame = 1
Query: 22 NCPGLRVELVVALFPKIVDLPEFDRVLFALTGPERRIVVRRLGRLNFFDPRRADGDYD-LDLSVWEDRVLASILAQL 249
N R +F +I+DL F ++ L+ ++ V+RLG LN FDP + D Y L+LS+++DR + ILAQL
Sbjct: 1116 NAVRARARAACLVFSRIIDLENFIQIYDGLSLEDQEECVKRLGWLNIFDPLQPDRQYPPLNLSIYDDREIVQILAQL 1192
BLAST of mRNA_M-pyrifera_M_contig68733.16524.1 vs. uniprot
Match: F0YFV2_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YFV2_AURAN) HSP 1 Score: 52.4 bits (124), Expect = 6.240e-6 Identity = 33/83 (39.76%), Postives = 49/83 (59.04%), Query Frame = 1
Query: 1 LVRLIPLNCPGLRVELVVALFPKIVDLPEFDRVLFALTGPERRIVVRRLGRLNFFDPRRADGDYDLDLSVWEDRVLASILAQL 249
LV P N LRVE+++A+F ++VDL F V+ L E +V RLG +N ++P AD Y L L V ++R +A +L +L
Sbjct: 1403 LVARFPRNAQQLRVEVLMAVFGRVVDLDNFYTVVDELDEEEIDELVFRLGYMNVYNPVFADRMYKLCLKVPDERQMAIVLVRL 1485 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig68733.16524.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig68733.16524.1 >prot_M-pyrifera_M_contig68733.16524.1 ID=prot_M-pyrifera_M_contig68733.16524.1|Name=mRNA_M-pyrifera_M_contig68733.16524.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=83bp LVRLIPLNCPGLRVELVVALFPKIVDLPEFDRVLFALTGPERRIVVRRLGback to top mRNA from alignment at M-pyrifera_M_contig68733:67..315- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig68733.16524.1 ID=mRNA_M-pyrifera_M_contig68733.16524.1|Name=mRNA_M-pyrifera_M_contig68733.16524.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=249bp|location=Sequence derived from alignment at M-pyrifera_M_contig68733:67..315- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig68733:67..315- >mRNA_M-pyrifera_M_contig68733.16524.1 ID=mRNA_M-pyrifera_M_contig68733.16524.1|Name=mRNA_M-pyrifera_M_contig68733.16524.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=498bp|location=Sequence derived from alignment at M-pyrifera_M_contig68733:67..315- (Macrocystis pyrifera P11B4 male)back to top |