mRNA_M-pyrifera_M_contig67846.16369.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig67846.16369.1 vs. uniprot
Match: A0A7S0A9Q9_9DINO (Hypothetical protein n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0A9Q9_9DINO) HSP 1 Score: 250 bits (639), Expect = 2.140e-79 Identity = 135/234 (57.69%), Postives = 167/234 (71.37%), Query Frame = 1
Query: 100 WTNDNWLKSLFHFSFAEWRAGPPNFGVLRVLNDDLVQPKRGFGTHGHSNMEIFTLIVSGHLTHQDSMGSAESLGRGSVQFMSAGTGVQHSEFNHSEEVPLRFLQLWIIPDKL-VQPRYGSYCGSSVEAIAERSNRWAHLASSVTSNAATPIKLQQDVSIRVAELHQ---PQTLEFSLSAGRQAYFVSVEGTASVFAEGSGELELDEQDAAELKGPLALRFTSAAAG-MWLLVEM 786
WTN+NWLKS FHFSFAE+ GP NFGVLRV+NDDLVQP RGFGTH H +MEI T +V G LTH+DSMG E+LGRGS+QFMSAGTGV+HSE N E LRF+Q WI+P K ++P YGS G + A A R ++WAHL S + +A TP+++ QD ++ VAEL + P T F L GRQAY + VEG AS+ + +G L DAAELKGPL+LR+T+ + G M LL EM
Sbjct: 60 WTNENWLKSRFHFSFAEYDYGPSNFGVLRVMNDDLVQPYRGFGTHPHRDMEIITFVVDGELTHKDSMGEDETLGRGSIQFMSAGTGVRHSEHNWHREKDLRFIQSWIVPRKRGLRPNYGSMLGGAA-AEAARRDQWAHLVSDASGSAKTPVQISQDCNVFVAELSRGASPGT--FELEPGRQAYVLCVEGEASLEGDAAG---LRRHDAAELKGPLSLRWTAGSTGAMLLLFEM 287
BLAST of mRNA_M-pyrifera_M_contig67846.16369.1 vs. uniprot
Match: A0A7S3YCF3_9EUKA (Hypothetical protein n=3 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YCF3_9EUKA) HSP 1 Score: 240 bits (612), Expect = 3.200e-75 Identity = 131/254 (51.57%), Postives = 173/254 (68.11%), Query Frame = 1
Query: 49 AEPAHVW--KRCKPKRDTHWTNDNWLKSLFHFSFAEW-RAGPPNFGVLRVLNDDLVQPKRGFGTHGHSNMEIFTLIVSGHLTHQDSMGSAESLGRGSVQFMSAGTGVQHSEFNHSEEVPLRFLQLWIIPDKL-VQPRYGSYCGSSVEAIAERSNRWAHLASSVTSNAATPIKLQQDVSIRVAELHQPQ-TLEFSLSAGRQAYFVSVEGTASVFAEGSGELELDEQDAAELKGPLALRFTSAAAGMWLLVEMKAE 795
+EP +W + + WTN NWLKS FHFSFAE+ NFGVLRV+NDDLVQP+RGFG+H H N EI T +V G LTHQDSMG+ ESLGRGS+QFM+AGTGV HSE N +E PLRF+Q+W+ P++ ++P YGS CGS +++ NRW HL SS +S A+TP+K+ D +I AEL + TL+ L+ GRQAYF++VEG+ ++ + G +L + DAAEL G + + T G LLVEMK +
Sbjct: 47 SEPNPMWFGNKANEPNNPKWTNKNWLKSRFHFSFAEYSNYENTNFGVLRVMNDDLVQPRRGFGSHPHRNAEIVTYVVQGKLTHQDSMGTKESLGRGSIQFMTAGTGVVHSEHNLDDE-PLRFIQMWLTPERSGLKPNYGSMCGSKIDS----KNRWGHLVSSTSSKASTPVKIHCDANIFSAELSDEKATLDLDLAEGRQAYFLAVEGSPTISGK-FGSQKLVQHDAAELSGGESFKITGP--GHVLLVEMKDD 292
BLAST of mRNA_M-pyrifera_M_contig67846.16369.1 vs. uniprot
Match: A0A7S3EBV2_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EBV2_9RHOD) HSP 1 Score: 238 bits (608), Expect = 1.330e-74 Identity = 124/238 (52.10%), Postives = 162/238 (68.07%), Query Frame = 1
Query: 100 WTNDNWLKSLFHFSFAEWRAGPPNFGVLRVLNDDLVQPKRGFGTHGHSNMEIFTLIVSGHLTHQDSMGSAESLGRGSVQFMSAGTGVQHSEFNHSEEVPLRFLQLWIIPDKL-VQPRYGSYCGSSVEAIAERSNRWAHLASSVTSNAATPIKLQQDVSIRVAELHQP-QTLEFSLSAGRQAYFVSVEGTASVFAEGSGELELDEQDAAELKGPLA----LRFTSAAAGMWLLVEMKAE 795
WTN NWLKS FHFSFAE G P FGVLRVLNDDLVQP RGFGTH HSNMEI T +V G LTH+DSMG++ESLGRGS+QFM+AGTGV HSE+N +E PLRF+Q+WI+P K ++P YGSY G S E + ++W H+ SSV S A ++ QDV+I EL + + L+ RQAY +++EG+ ++ +G+ E +L++QDAAE+ A L F++ +LV A
Sbjct: 70 WTNANWLKSRFHFSFAENMNGKPKFGVLRVLNDDLVQPSRGFGTHPHSNMEIVTYVVDGELTHKDSMGTSESLGRGSIQFMTAGTGVMHSEYNDHDEKPLRFIQMWILPKKRGLKPNYGSYRGGSCE---DAKDKWMHMVSSVESEADAKARVNQDVNIYATELSEAGKKLDLDFGPDRQAYVLAIEGSLTIDLDGASEAKLNQQDAAEIVSKSAKTEKLEFSAVEGPAHVLVVEMAR 304
BLAST of mRNA_M-pyrifera_M_contig67846.16369.1 vs. uniprot
Match: A0A7S4UAQ4_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4UAQ4_9DINO) HSP 1 Score: 237 bits (604), Expect = 4.300e-74 Identity = 127/236 (53.81%), Postives = 158/236 (66.95%), Query Frame = 1
Query: 100 WTNDNWLKSLFHFSFAEWRAGPPNFGVLRVLNDDLVQPKRGFGTHGHSNMEIFTLIVSGHLTHQDSMGSAESLGRGSVQFMSAGTGVQHSEFNHSEEVPLRFLQLWIIPDKL-VQPRYGSYCGSSVEAIAERSNRWAHLASSVTSNAATPIKLQQDVSIRVAELH---QPQTLEFSLSAGRQAYFVSVEGTASVFAEGSGELELDEQDAAELKGPLALRFTSAAAGMWLLVEMKAE 795
WT NWLKS FHF+FAE+ GP NFGVLRV+NDD+VQP RGFG H H +MEI T +V G LTHQDSMG E+LGRGS+QFMSAGTGV+HSE N E PLRF+Q W++P K + P YGS G + + A R +RWAHL S V S P+++ QD ++ V EL P LE LS+GRQAY + VEG AS+ E+ L DAAEL GP +L++++ G LLV A+
Sbjct: 60 WTEKNWLKSRFHFNFAEYGDGPDNFGVLRVMNDDVVQPMRGFGKHPHRDMEIITFVVDGQLTHQDSMGEHETLGRGSIQFMSAGTGVRHSEHNWDGEQPLRFIQSWVVPRKRGLTPNYGSMVGDAAASAARR-DRWAHLVSDVNSRIKAPVQICQDCNVYVTELSPGASPGPLE--LSSGRQAYLLCVEGEASL---AGSEVALRRHDAAELTGPQSLQWSAGGDGAMLLVFEMAQ 289
BLAST of mRNA_M-pyrifera_M_contig67846.16369.1 vs. uniprot
Match: A0A7S0BEU9_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BEU9_9RHOD) HSP 1 Score: 237 bits (605), Expect = 5.610e-74 Identity = 128/238 (53.78%), Postives = 159/238 (66.81%), Query Frame = 1
Query: 100 WTNDNWLKSLFHFSFAEWRAGPPNFGVLRVLNDDLVQPKRGFGTHGHSNMEIFTLIVSGHLTHQDSMGSAESLGRGSVQFMSAGTGVQHSEFNHSEEVPLRFLQLWIIPDKL-VQPRYGSYCGSSVEAIAERSNRWAHLASSVTSNAATPIKLQQDVSIRVAELHQP-QTLEFSLSAGRQAYFVSVEGTASVFAEGSGELELDEQDAAELKGPL----ALRFTSAAAGMWLLVEMKAE 795
WTN NWLKS FHFSFAE G P FGVLRVLNDDLVQP RGFGTH HSNMEI T +V G LTH+DSMG++ESLGRGSVQFM+AGTGV HSE+N ++ PLRF+Q+WI+P K ++P YGSY G + ++ W HL SSV S A K+ QDV+I V EL + + L+ L RQAY ++VEG +V EG+ +L++QDAAE+ L FT+ +LV A
Sbjct: 83 WTNANWLKSRFHFSFAEHTNGKPKFGVLRVLNDDLVQPSRGFGTHPHSNMEIVTYVVDGELTHKDSMGTSESLGRGSVQFMTAGTGVMHSEYNDDDKNPLRFIQMWILPRKRGLKPNYGSYRGGGCDNARDK---WVHLVSSVESQADAKAKVDQDVNIYVTELSEAGRKLDLDLEPDRQAYVLAVEGMLTVDLEGASTEKLNQQDAAEIVSKSDRTEQLEFTAVGGTAHVLVVEMAN 317
BLAST of mRNA_M-pyrifera_M_contig67846.16369.1 vs. uniprot
Match: A0A7S4LMU9_OXYMA (Hypothetical protein n=1 Tax=Oxyrrhis marina TaxID=2969 RepID=A0A7S4LMU9_OXYMA) HSP 1 Score: 234 bits (597), Expect = 2.250e-73 Identity = 129/245 (52.65%), Postives = 161/245 (65.71%), Query Frame = 1
Query: 43 VGAEPAHVWKRCKPKRDTHWTNDNWLKSLFHFSFAEW----RAGPPNFGVLRVLNDDLVQPKRGFGTHGHSNMEIFTLIVSGHLTHQDSMGSAESLGRGSVQFMSAGTGVQHSEFNHSEEVPLRFLQLWIIPDKL-VQPRYGSYCGSSVEAIAERSNRWAHLASSVTSNAAT--PIKLQQDVSIRVAELHQPQTLEFSLSAGRQAYFVSVEGTASVFAEGSGELELDEQDAAELKGPLALRFTSA 756
V P H++ ++ WTN NWLKS FHFSFAE+ R+G FGVLRV+NDDLVQP RGFGTH H NMEI T IVSG LTH+DSMG+ E+LGRGSVQFM+AGTGV+HSEFNH E PLRF+Q+W++P++ ++P YG G A ER RWAHLA V+S + P+ + D +I AE+ + LEF + AGRQAY + VEG+A V G G+L D + GP L FT A
Sbjct: 12 VSEPPPHLFGNAGNEKKATWTNGNWLKSRFHFSFAEYSDSKRSG---FGVLRVMNDDLVQPARGFGTHPHRNMEIVTYIVSGQLTHKDSMGTEETLGRGSVQFMTAGTGVRHSEFNHDPEKPLRFVQMWLMPNRSGLKPNYG---GREPAAPTERDGRWAHLAMPVSSKCSPDKPVPINCDANIYAAEIQPGKGLEFQVEAGRQAYVLCVEGSARVGGLGGGKLV--RHDGMQAVGPGVLSFTDA 248
BLAST of mRNA_M-pyrifera_M_contig67846.16369.1 vs. uniprot
Match: A0A812JRB7_9DINO (Hypothetical protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812JRB7_9DINO) HSP 1 Score: 233 bits (595), Expect = 7.440e-73 Identity = 128/253 (50.59%), Postives = 169/253 (66.80%), Query Frame = 1
Query: 49 AEPAHVW---KRCKPKRDTHWTNDNWLKSLFHFSFAEWRAGPPNFGVLRVLNDDLVQPKRGFGTHGHSNMEIFTLIVSGHLTHQDSMGSAESLGRGSVQFMSAGTGVQHSEFNHSEEVPLRFLQLWIIPDKL-VQPRYGSYCGSSVEAIAERSNRWAHLASSVTSNAATPIKLQQDVSIRVAELHQPQTL-EFSLSAGRQAYFVSVEGTASVFAEGSGELELDEQDAAELKGPLALRFTSAAAG-MWLLVEMK 789
+EP W + P + WTN NWLKS FHF+FAE+ GP NFGVLRV+NDDLVQPKRGFG H H +MEI T I+ GHLTH+DSMG+ E+LGRG VQFM+AGTG+QHSE N + LRF+Q W++P + ++PRYGS G S EA A R N+WAH+A P+++ QD ++ ++E+ TL + L AGRQ Y + VEG SV +G +L + DAAELKGP+ L+ ++ G + LL EM+
Sbjct: 36 SEPNPAWFGNRPNPPPGEPGWTNRNWLKSRFHFNFAEYDGGPDNFGVLRVMNDDLVQPKRGFGMHPHRDMEILTFIIQGHLTHRDSMGTEETLGRGGVQFMTAGTGIQHSEHN-LQSTALRFVQCWVVPRRRGLRPRYGSMTGGS-EAEALRRNQWAHIACDAEGGHKAPVRIYQDCNVFLSEVSPHTTLPKLDLEAGRQGYLLCVEG--SVQLDGK---QLQQHDAAELKGPMGLQPRASDTGALLLLFEME 281
BLAST of mRNA_M-pyrifera_M_contig67846.16369.1 vs. uniprot
Match: A0A813B5S6_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813B5S6_9DINO) HSP 1 Score: 233 bits (594), Expect = 1.950e-72 Identity = 124/234 (52.99%), Postives = 164/234 (70.09%), Query Frame = 1
Query: 100 WTNDNWLKSLFHFSFAEWRAGPPNFGVLRVLNDDLVQPKRGFGTHGHSNMEIFTLIVSGHLTHQDSMGSAESLGRGSVQFMSAGTGVQHSEFNHSEEVPLRFLQLWIIPDKL-VQPRYGSYCGSSVEAIAERSNRWAHLASSVTSNAATPIKLQQDVSIRVAELHQPQTLE-FSLSAGRQAYFVSVEGTASVFAEGSGEL-ELDEQDAAELKGPLALRFTSAAAG-MWLLVEMK 789
WTN+NWLKS FHF+FAE+ AGP +FGVLRV+NDDLVQP+RGFG H H +MEI T I+ G LTH+DSMG+ E+LGRGSVQFM+AGTG++HSE N +E PLRF+Q W++P + P YGS G EA A R ++WAH+ S +++QQD ++ + EL ++ +L AGRQ Y + VEG+A + +GSG++ +L D ELKGPL L T+ AAG M LL EM+
Sbjct: 69 WTNENWLKSRFHFNFAEYHAGPSSFGVLRVMNDDLVQPRRGFGAHPHRDMEIMTFIIDGFLTHKDSMGTEETLGRGSVQFMTAGTGIRHSEHNLKDE-PLRFVQCWVVPRRRGFPPNYGSMSGGG-EAEAARRDQWAHVVSDAEGPTKAAVQIQQDCNVFLTELSPSKSPPALALDAGRQGYMLCVEGSAKL-TDGSGKVHDLQRHDGIELKGPLTLDPTAGAAGSMLLLFEMQ 299
BLAST of mRNA_M-pyrifera_M_contig67846.16369.1 vs. uniprot
Match: C1EAB9_MICCC (Uncharacterized protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1EAB9_MICCC) HSP 1 Score: 231 bits (590), Expect = 2.490e-72 Identity = 129/238 (54.20%), Postives = 161/238 (67.65%), Query Frame = 1
Query: 100 WTNDNWLKSLFHFSFAEWRAGP-PNFGVLRVLNDDLVQPKRGFGTHGHSNMEIFTLIVSGHLTHQDSMGSAESLGRGSVQFMSAGTGVQHSEFNHSEEVPLRFLQLWIIPDKL-VQPRYGSYCGSSVEAIAERSNRWAHLASSVT---SNAAT-PIKLQQDVSIRVAELHQPQTLEFSLSAGRQAYFVSVEGTASVFAEGSGELELDEQDAAELKGPLALRFTSAAAGMWLLVEMKAE 795
WTN+NWLKS FHFSFAE+ ++GVLRV+NDDLVQP RGFGTHGH+NMEI T IV G LTH+DSMG++ESLGRGS+QFM+AGTGV+HSE N + PLRF+Q+WI P+ + P YGS+ S ER NRW L V +NA T P+++ QD I VAE+ QTL S+ AGRQAY + +EG+A A+G+G L+ DAAEL+ L T+ G LLV AE
Sbjct: 33 WTNENWLKSRFHFSFAEYNTHKNADYGVLRVMNDDLVQPGRGFGTHGHANMEIVTYIVEGSLTHKDSMGTSESLGRGSIQFMTAGTGVRHSEHNLDKSNPLRFIQMWITPNAGGLAPNYGSHETSP----DERKNRWCRLVGPVPGAGANAGTAPVQINQDAGISVAEIDAGQTLPLSVPAGRQAYLLCMEGSA---ADGAGGESLERHDAAELEAGTELNLTAGEEGAHLLVVEMAE 263
BLAST of mRNA_M-pyrifera_M_contig67846.16369.1 vs. uniprot
Match: A0A7S4DIK7_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DIK7_9EUKA) HSP 1 Score: 232 bits (592), Expect = 1.530e-71 Identity = 131/259 (50.58%), Postives = 171/259 (66.02%), Query Frame = 1
Query: 49 AEPAHVW--KRCKPKRDTHWTNDNWLKSLFHFSFAEW-RAGPPNFGVLRVLNDDLVQPKRGFGTHGHSNMEIFTLIVSGHLTHQDSMGSAESLGRGSVQFMSAGTGVQHSEFNHSEEVPLRFLQLWIIPDKL-VQPRYGSYCGSSVEAIAERSNRWAHLASSVTSNAA-TPIKLQQDVSIRVAELHQPQT-LEFSLSAGRQAYFVSVEGTASVFAEGSGELE-LDEQDAAEL---KGPLALRFTSAAAGMWLLVEMKAE 795
+EP +W R+ WTN NWLKS FHFSFAE+ G NFGVLRV+NDDLVQPKRGFG H HSN EI T +V+G LTH+DSMG+ ESLGRGS+QFM+AG GV HSE N +E PLRF+Q+W+ P + ++P YGS CG+ +++ N+ H+ SSVT++AA TP+K+ D +I EL ++ + L GRQAY ++VEG +V A SGE + + DAAEL GP +F + G L+VEMK E
Sbjct: 94 SEPNPLWFGNASNEPRNPKWTNPNWLKSRFHFSFAEYSNPGNTNFGVLRVMNDDLVQPKRGFGAHPHSNAEIVTYVVNGKLTHEDSMGTKESLGRGSIQFMTAGRGVTHSEHNLEDE-PLRFIQMWLTPSQYGLKPNYGSMCGTQIDS----KNKLGHMVSSVTNHAAQTPVKIHCDANIYATELSDSKSSVALKLGKGRQAYLLAVEGAPTVTAASSGESQKFAQHDAAELYPGTGPTGEQFEISGPGHVLVVEMKQE 347 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig67846.16369.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig67846.16369.1 >prot_M-pyrifera_M_contig67846.16369.1 ID=prot_M-pyrifera_M_contig67846.16369.1|Name=mRNA_M-pyrifera_M_contig67846.16369.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=266bp SSDEEGFHAQRRIRVGAEPAHVWKRCKPKRDTHWTNDNWLKSLFHFSFAEback to top mRNA from alignment at M-pyrifera_M_contig67846:61..858+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig67846.16369.1 ID=mRNA_M-pyrifera_M_contig67846.16369.1|Name=mRNA_M-pyrifera_M_contig67846.16369.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=798bp|location=Sequence derived from alignment at M-pyrifera_M_contig67846:61..858+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig67846:61..858+ >mRNA_M-pyrifera_M_contig67846.16369.1 ID=mRNA_M-pyrifera_M_contig67846.16369.1|Name=mRNA_M-pyrifera_M_contig67846.16369.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1596bp|location=Sequence derived from alignment at M-pyrifera_M_contig67846:61..858+ (Macrocystis pyrifera P11B4 male)back to top |