mRNA_M-pyrifera_M_contig67621.16324.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig67621.16324.1
Unique NamemRNA_M-pyrifera_M_contig67621.16324.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig67621.16324.1 vs. uniprot
Match: UPI001804114C (integrase core domain-containing protein n=1 Tax=Roseospira marina TaxID=140057 RepID=UPI001804114C)

HSP 1 Score: 383 bits (984), Expect = 1.920e-128
Identity = 193/358 (53.91%), Postives = 237/358 (66.20%), Query Frame = 1
Query:   73 MPWEET--MDQRIRAVMNVINCGLSKVSVCEEFGISRPTLDKWLVRYESEGVEGLRDRSRARHHQANMVDAETVEKIVRFRRDHPDRGPRKIKVELERDFPETTWPASSTIAEILDRHGLTVHRKRNRRTEPYTEPFAGCDTPNDVWCIDFKGWFLTGDGKRCNPLTLTDANTRYLIRCDDVSTTGFEDVKPVVESAFREYGLPRAIRSDNGAPFASRAPRGLSKLSVWWIRLGITPERIEPGKPQQNGRHERMHLTLHQGVASPPKATLRAQQRALREFQRDYNFSRPHEALGQRPPAELYVPSARPYPRHLPEVTYPAEFIVRRVEKKGIISWHQSRIFISEALSGEPVGLLPLDD 1140
            M W+ET  MD+R+R V   +N   +K ++C  FGISR    KWL RY   G  GL DRSRA H  A  V    +E ++  RR H   GPRKIK  LE   P+  WPA+STI E+LDRHGLT  RKR RR  P +EPF  C  PNDVWC+DFKGWFLTGDG R  P T+TD  +RYL+ C  ++ T  EDV P++ES+FRE+GLP A+RSDNG PFA R   GLS+L+V  I+ G+ PERI PGKPQQNGRHERMHLTL Q  ASP   +LR Q +    F+  +N  RPHEALGQ+PPA ++ PSAR +   L    YPA+ +VRRV   G I W  + +F+SE L GEP+GL P+ D
Sbjct:    1 MVWKETCVMDERLRFVTACLNKDDTKAALCRRFGISRRVGYKWLERYARAGPAGLEDRSRAPHGNARSVSQAEIEAVISVRRCHGTWGPRKIKAWLEDHDPDRAWPAASTIGEVLDRHGLTHPRKRRRRVLPQSEPFQSCVAPNDVWCMDFKGWFLTGDGTRVEPFTVTDGFSRYLLVCQALNGTTTEDVWPMLESSFREHGLPVALRSDNGPPFAGRGVAGLSRLAVRLIKAGVRPERIAPGKPQQNGRHERMHLTLLQDTASPAARSLREQIQRFAVFREAFNEERPHEALGQKPPASVFRPSARAFDGVLRSPEYPADALVRRVRHNGEIKWRGTTLFVSEVLVGEPLGLFPIAD 358          
BLAST of mRNA_M-pyrifera_M_contig67621.16324.1 vs. uniprot
Match: UPI002010ECB5 (integrase core domain-containing protein n=1 Tax=Bradyrhizobium lablabi TaxID=722472 RepID=UPI002010ECB5)

HSP 1 Score: 384 bits (985), Expect = 3.110e-128
Identity = 193/353 (54.67%), Postives = 237/353 (67.14%), Query Frame = 1
Query:   73 MPWEET--MDQRIRAVMNVINCGLSKVSVCEEFGISRPTLDKWLVRYESEGVEGLRDRSRARHHQANMVDAETVEKIVRFRRDHPDRGPRKIKVELERDFPETTWPASSTIAEILDRHGLTVHRKRNRRTEPYTEPFAGCDTPNDVWCIDFKGWFLTGDGKRCNPLTLTDANTRYLIRCDDVSTTGFEDVKPVVESAFREYGLPRAIRSDNGAPFASRAPRGLSKLSVWWIRLGITPERIEPGKPQQNGRHERMHLTLHQGVASPPKATLRAQQRALREFQRDYNFSRPHEALGQRPPAELYVPSARPYPRHLPEVTYPAEFIVRRVEKKGIISWHQSRIFISEALSGEPVGL 1125
            M W ET  +D+R+R V+ +     S  + C +FG+SR    KWL RYE  GVEGL DRSRA  H  + +  E  E+ +  RR HP  GP K++  LER  P T WPA+STI  + DR GLTV RK  RR+ P + PFA C   N+VWCIDFKGWFLTG G+RC PLT+TDA +RYL+RC  +  T  + V PV+++AFRE+GLPR +RSDNG+PFASR   GLS+LSV  I+ G+ PERI PGKPQQNGRHERMHLTL Q  ASPP A+LR Q   LR FQR YN  RPH++LG   PA+ Y PS R Y   L +  Y A  +VRRV + G I W    +++SEAL GEPVGL
Sbjct:    1 MGWTETCAVDERMRFVIALEKREASFAATCRQFGVSRRVGYKWLARYEEAGVEGLCDRSRAPRHHPHAIAEEVAEQCLAVRRAHPTWGPLKVRAWLERRSPATDWPAASTIGTLFDREGLTVKRKLRRRSPPSSAPFAQCAAANEVWCIDFKGWFLTGGGRRCEPLTITDAYSRYLLRCLALKRTDTDHVWPVLDAAFREFGLPRYMRSDNGSPFASRGAGGLSRLSVMLIKAGVIPERIAPGKPQQNGRHERMHLTLLQDTASPPAASLRQQIERLRNFQRLYNEERPHQSLGDATPADHYAPSPRRYEGILRQPEYDAGHVVRRVRRNGDIRWRGRTVYVSEALIGEPVGL 353          
BLAST of mRNA_M-pyrifera_M_contig67621.16324.1 vs. uniprot
Match: A0A0F9ILC1_9ZZZZ (Integrase catalytic domain-containing protein n=1 Tax=marine sediment metagenome TaxID=412755 RepID=A0A0F9ILC1_9ZZZZ)

HSP 1 Score: 380 bits (975), Expect = 7.790e-127
Identity = 191/357 (53.50%), Postives = 236/357 (66.11%), Query Frame = 1
Query:   73 MPWEETM--DQRIRAVMNVINCGLSKVSVCEEFGISRPTLDKWLVRYESEGVEGLRDRSRARHHQANMVDAETVEKIVRFRRDHPDRGPRKIKVELERDFPETTWPASSTIAEILDRHGLTVHRKRNRRTEPYTEPFAGCDTPNDVWCIDFKGWFLTGDGKRCNPLTLTDANTRYLIRCDDVSTTGFEDVKPVVESAFREYGLPRAIRSDNGAPFASRAPRGLSKLSVWWIRLGITPERIEPGKPQQNGRHERMHLTLHQGVASPPKATLRAQQRALREFQRDYNFSRPHEALGQRPPAELYVPSARPYPRHLPEVTYPAEFIVRRVEKKGIISWHQSRIFISEALSGEPVGLLPLD 1137
            MPW ET   DQR+R +  +     S    C ++ ISR +  KWL R+++EG  GL DRSRA  H  N V  E VE I+  R D    GP+K++V+L R  PE  WPA ST+ +IL  +G  + RK+ RR  P + P A CD PN VWC DFKG F TGDG+RC+PLT+TD  +R+L+RC ++  T     +P+ E+AFREYGLPRAIRSDNGAPFASRA  GLS LSVWWI+LGI PERI+PGKPQQNGRHERMHLTL Q  A PP +T   QQR    F++ YN  RPHEALG   PA +Y  S R YP   PEV+YP ++  R+V+  G   W    +F+SE L GEPVGL P+D
Sbjct:    1 MPWMETRMPDQRMRFIAELEFSQSSMAQACRKYRISRKSGYKWLARWKAEGPSGLVDRSRAPRHHPNEVLPEVVEAILTLR-DEMGWGPKKLRVDLIRQQPEVAWPAISTMEQILKDNGRVIPRKKRRRVPPQSAPLAHCDGPNTVWCCDFKGHFKTGDGRRCDPLTITDGFSRFLLRCQNLRGTSGRAARPIFEAAFREYGLPRAIRSDNGAPFASRAVAGLSGLSVWWIKLGILPERIQPGKPQQNGRHERMHLTLKQETARPPASTFGKQQRRFDTFRQIYNERRPHEALGMATPASVYEASPRQYPAWEPEVSYPEDWETRKVQCDGDFHWRSQPVFLSEVLWGEPVGLEPVD 356          
BLAST of mRNA_M-pyrifera_M_contig67621.16324.1 vs. uniprot
Match: UPI001CE2D24A (integrase core domain-containing protein n=2 Tax=Bradyrhizobium sp. WSM 1738 TaxID=2821405 RepID=UPI001CE2D24A)

HSP 1 Score: 374 bits (959), Expect = 6.640e-125
Identity = 186/345 (53.91%), Postives = 232/345 (67.25%), Query Frame = 1
Query:   91 MDQRIRAVMNVINCGLSKVSVCEEFGISRPTLDKWLVRYESEGVEGLRDRSRARHHQANMVDAETVEKIVRFRRDHPDRGPRKIKVELERDFPETTWPASSTIAEILDRHGLTVHRKRNRRTEPYTEPFAGCDTPNDVWCIDFKGWFLTGDGKRCNPLTLTDANTRYLIRCDDVSTTGFEDVKPVVESAFREYGLPRAIRSDNGAPFASRAPRGLSKLSVWWIRLGITPERIEPGKPQQNGRHERMHLTLHQGVASPPKATLRAQQRALREFQRDYNFSRPHEALGQRPPAELYVPSARPYPRHLPEVTYPAEFIVRRVEKKGIISWHQSRIFISEALSGEPVGL 1125
            +++R+R VM V     S  ++C  F +SR T  KWL RYE EG+ GL DR+RA HH  + +  + +E+ +  R+ HP  GP K++  LER  P   WP +STI  + DR GLTV RK  RR+ P + PFA C   NDVWCIDFKGWFLTGDG RC PLTL+DA +RYL+RC  ++ T  E V P++++AFRE+GLP  +RSDNG+PFASR   GLS+LSV  I+ G+TPERI PGKPQQNGRHERMHLTL Q  A+PP  TLR Q + L+ FQR YN  RPH+AL    PA+ Y  S R Y   L E  Y  +  VRRV   G I W+ S I+I+EAL GEPVGL
Sbjct:    9 VEERMRFVMAVEERQESFAAICRRFAVSRKTGYKWLERYEEEGIAGLSDRTRAPHHHPHAIAEDVLEQCLAVRQAHPSWGPVKVRAYLERRHPSKGWPVASTIGALFDREGLTVKRKLRRRSPPSSAPFAHCGAANDVWCIDFKGWFLTGDGSRCEPLTLSDACSRYLLRCQALARTDTEHVWPILDAAFREFGLPLYLRSDNGSPFASRGAGGLSRLSVKLIKAGVTPERIAPGKPQQNGRHERMHLTLLQDTANPPARTLREQIKRLQAFQRLYNEQRPHQALDNATPADRYAASPRRYDGVLREPGYGVDHRVRRVRHNGEIKWNGSTIYINEALVGEPVGL 353          
BLAST of mRNA_M-pyrifera_M_contig67621.16324.1 vs. uniprot
Match: UPI00201345DD (integrase core domain-containing protein n=3 Tax=Bradyrhizobium TaxID=374 RepID=UPI00201345DD)

HSP 1 Score: 369 bits (948), Expect = 8.050e-123
Identity = 193/358 (53.91%), Postives = 237/358 (66.20%), Query Frame = 1
Query:   73 MPWEET--MDQRIRAVMNVINCGLSKVSVCEEFGISRPTLDKWLVRYESEGVEGLRDRSRARHHQANMVDAETVEKIVRFRRDHPDRGPRKIKVELERDFPETTWPASSTIAEILDRHGLTVHRKRNRRTEPYTEPFAGCDTPNDVWCIDFKGWFLTGDGKRCNPLTLTDANTRYLIRCDDVSTTGFEDVKPVVESAFREYGLPRAIRSDNGAPFASRAPRGLSKLSVWWIRLGITPERIEPGKPQQNGRHERMHLTLHQGVASPPKATLRAQQRALREFQRDYNFSRPHEALGQRPPAELYVPSARPYPRHLPEVTYPAEFIVRRVEKKGIISWHQSRIFISEALSGEPVGLLPLDD 1140
            M W+ET  +D+R+R ++ V     S  ++C  F +SR    KWL R+E EGV GL DRSRA       +  +  E+ +  RR HP  GP K++  LER  P+T WPA+STI E+ DR GLTV RK  RR+ P + PFA C+  NDVWCIDFKGWFLTGDGKRC PLTLTDA++RYL+RC  +  T  E V PV+++AFRE+GLPR IRSDNG+PFAS    GLS+LSV  I+ G+TPERI PGKPQQNGRHERMHLTL Q VA+PP  ++R Q R LR FQR YN  RPH+AL    PAE Y  S R +   L    Y  +  VRRV   G I      I+I+ AL+GEPVGL   +D
Sbjct:    1 MGWKETCAVDERMRFMVAVEKGEESFAAICRRFDVSRRIGYKWLARFEEEGVAGLLDRSRAPRRHPQAIVPKIAERCLEVRRAHPTWGPMKVRAYLERAAPKTDWPATSTIGELFDREGLTVKRKLRRRSPPSSAPFAHCEAANDVWCIDFKGWFLTGDGKRCEPLTLTDAHSRYLLRCQALPRTDTEHVWPVLDAAFREFGLPRYIRSDNGSPFASCGAGGLSQLSVKLIKAGVTPERIAPGKPQQNGRHERMHLTLLQEVANPPAHSMREQLRRLRSFQRLYNEERPHQALDDATPAECYQASVRRFDGILRSPVY-GDQEVRRVRHNGEIKLDGKFIYITAALAGEPVGLAGSED 357          
BLAST of mRNA_M-pyrifera_M_contig67621.16324.1 vs. uniprot
Match: A0A2V8X894_9BACT (IS481 family transposase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8X894_9BACT)

HSP 1 Score: 369 bits (947), Expect = 1.430e-122
Identity = 180/350 (51.43%), Postives = 230/350 (65.71%), Query Frame = 1
Query:   91 MDQRIRAVMNVINCGLSKVSVCEEFGISRPTLDKWLVRYESEGVEGLRDRSRARHHQANMVDAETVEKIVRFRRDHPDRGPRKIKVELERDFPETTWPASSTIAEILDRHGLTVHRKRNRRTEPYTEPFAGCDTPNDVWCIDFKGWFLTGDGKRCNPLTLTDANTRYLIRCDDVSTTGFEDVKPVVESAFREYGLPRAIRSDNGAPFASRAPRGLSKLSVWWIRLGITPERIEPGKPQQNGRHERMHLTLHQGVASPPKATLRAQQRALREFQRDYNFSRPHEALGQRPPAELYVPSARPYPRHLPEVTYPAEFIVRRVEKKGIISWHQSRIFISEALSGEPVGLLPLDD 1140
            M++++R V    +   +   +C+++ I+R T   WL RY   GV GL +RSRA H   N    E    ++  R+ H   GPRK++  LERD P   WPA+STI E+L R GL V RK+  RT PY+EP A  D  N VWC DFKGWF TGDG+R +PLT++DA++RYL+RC  V  T    V+ + E+AFREYG+P AIR+DNG PFAS A  GLS+L+VWWI+LGI PERI  G P+QNGRHERMH TL Q VA PP A  R QQRAL  F+++YN  RPHEAL  R PA +Y  S R +P  +PE  YP   +VR V ++G   W +  +F+SE L GE VGLLP+DD
Sbjct:    1 MEEKLRFVFEFESGEHTMTELCQQYEIARQTGYVWLWRYRQAGVPGLVERSRAAHRHRNQTPEEIERMVLELRQAHMRWGPRKLQRVLERDEPGRAWPATSTIGELLKREGLVVARKKRLRTAPYSEPLAHADGANRVWCADFKGWFRTGDGERIDPLTISDAHSRYLLRCQAVEKTDTARVQAIFEAAFREYGVPAAIRTDNGVPFASSAVAGLSRLAVWWIKLGIVPERIAAGHPEQNGRHERMHRTLKQEVAQPPAANRRKQQRALHRFRQEYNQVRPHEALQMRTPASVYEASERKFPASVPEPEYPESMLVRSVRRRGHFRWQKYEVFLSEVLWGERVGLLPVDD 350          
BLAST of mRNA_M-pyrifera_M_contig67621.16324.1 vs. uniprot
Match: A0A523IB73_9CHLR (IS481 family transposase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A523IB73_9CHLR)

HSP 1 Score: 367 bits (941), Expect = 5.260e-122
Identity = 184/355 (51.83%), Postives = 226/355 (63.66%), Query Frame = 1
Query:   73 MPWEE--TMDQRIRAVMNVINCGLSKVSVCEEFGISRPTLDKWLVRYESEGVEGLRDRSRARHHQANMVDAETVEKIVRFRRDHPDRGPRKIKVELERDFPETTWPASSTIAEILDRHGLTVHRKRNRRTEPYTEPFAGCDTPNDVWCIDFKGWFLTGDGKRCNPLTLTDANTRYLIRCDDVSTTGFEDVKPVVESAFREYGLPRAIRSDNGAPFASRAPRGLSKLSVWWIRLGITPERIEPGKPQQNGRHERMHLTLHQGVASPPKATLRAQQRALREFQRDYNFSRPHEALGQRPPAELYVPSARPYPRHLPEVTYPAEFIVRRVEKKGIISWHQSRIFISEALSGEPVGLLP 1131
            MPW++   +DQR+  ++       S  +VC  FG+SR T  KW+ RY   G+EGL DRSRA H   N V AE V  ++  + +HP  GPRK+   L R  PE   PA ST  EIL RH L   RKR RRT+P+T PF  C  PN+ WCIDFKGWF T DG RC+PLT+TDA +R L+ C  + +     V+  +E  FREYGLP  IRSDNG PFAS AP GLS+LSV+WI+LGI PERI PG P++NGRHERMH TL       P   + AQQ+    F+ ++N  RPHEALGQ PPA LY PS R YP  + E+ Y +E  VRRV   G I W    I++SEAL GEPVGL+P
Sbjct:    1 MPWKDIQVLDQRMSFIVAYRRGEDSLAAVCRRFGVSRKTGRKWVERYCESGLEGLLDRSRAPHRHPNAVSAEIVRLVIMAKHEHPAWGPRKLIPWLRRRHPEIELPAPSTAGEILWRHDLVQPRKRVRRTDPWTRPFEDCTAPNETWCIDFKGWFRTLDGVRCDPLTITDAYSRMLLCCRGLESQNGRLVRRAMERVFREYGLPATIRSDNGTPFASTAPGGLSRLSVYWIKLGIMPERIRPGHPEENGRHERMHRTLKAETIVRPMPNMPAQQKVFDSFRLEFNEERPHEALGQNPPASLYRPSERSYPSRIREIEYASEMTVRRVRTSGEIKWKGGLIYLSEALVGEPVGLVP 355          
BLAST of mRNA_M-pyrifera_M_contig67621.16324.1 vs. uniprot
Match: A0A7S7NKH8_9BACT (IS481 family transposase n=2 Tax=Paludibaculum fermentans TaxID=1473598 RepID=A0A7S7NKH8_9BACT)

HSP 1 Score: 364 bits (934), Expect = 8.950e-121
Identity = 185/359 (51.53%), Postives = 238/359 (66.30%), Query Frame = 1
Query:   73 MPWEET--MDQRIRAVMNVINCGLSKVSVCEEFGISRPTLDKWLVRYESEGVEGLRDRSRARHHQANMVDAETVEKIVRFRRDHPDRGPRKIKVELERDFPETT-WPASSTIAEILDRHGLTVHRKRNRRTEPYTEPFAGCDTPNDVWCIDFKGWFLTGDGKRCNPLTLTDANTRYLIRCDDVSTTGFEDVKPVVESAFREYGLPRAIRSDNGAPFASRAPRGLSKLSVWWIRLGITPERIEPGKPQQNGRHERMHLTLHQGVASPPKATLRAQQRALREFQRDYNFSRPHEALGQRPPAELYVPSARPYPRHLPEVTYPAEFIVRRVEKKGIISWHQSRIFISEALSGEPVGLLPLDD 1140
            MPW+ET  MDQR++ ++   + G +  ++ E +G+SR T+ KW+ R E EGV GL+DRSRA H     V  E +E+I+  RR   + GPRK+  +L    PE   WPA STIA IL R GL+V RKR  RT P+ +PFA  D PN  WC DFKGWF TGDG RC+PLT+TDA++RYL+RC     T  +    + E+AFREYGLP  IR+DNG PF++RAP GLS+LS+ W+RLGI PER  P  PQ+NGRHERMH TL Q   +PP A  R QQ+   +FQR YN  RPHEAL    PA+ Y PS RP PR +PEV YPA  ++RR++  G + +   RIFISE  + + +GL  +DD
Sbjct:    1 MPWKETRAMDQRVQ-LLQEYDEGETVTALAEAYGVSRKTVHKWIKRREEEGVAGLQDRSRAPHTSPQEVSQEVIERILAERRKW-NWGPRKLLRKLAEAEPERKHWPAPSTIAMILKRAGLSVTRKRRLRTPPFGQPFASVDGPNRTWCADFKGWFRTGDGVRCDPLTITDAHSRYLLRCQITPKTDGKHAAAIFEAAFREYGLPEVIRTDNGTPFSTRAPGGLSRLSMRWVRLGILPERTAPASPQENGRHERMHRTLKQDTLNPPAANPRQQQKRFHDFQRIYNEQRPHEALDYDTPAKHYQPSLRPMPRRIPEVEYPAGLVLRRIQNHGDLYYKDQRIFISEIFARQLLGLRQVDD 357          
BLAST of mRNA_M-pyrifera_M_contig67621.16324.1 vs. uniprot
Match: A0A0F9DEW8_9ZZZZ (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=marine sediment metagenome TaxID=412755 RepID=A0A0F9DEW8_9ZZZZ)

HSP 1 Score: 363 bits (933), Expect = 1.190e-120
Identity = 173/333 (51.95%), Postives = 223/333 (66.97%), Query Frame = 1
Query:  139 SKVSVCEEFGISRPTLDKWLVRYESEGVEGLRDRSRARHHQANMVDAETVEKIVRFRRDHPDRGPRKIKVELERDFPETTWPASSTIAEILDRHGLTVHRKRNRRTEPYTEPFAGCDTPNDVWCIDFKGWFLTGDGKRCNPLTLTDANTRYLIRCDDVSTTGFEDVKPVVESAFREYGLPRAIRSDNGAPFASRAPRGLSKLSVWWIRLGITPERIEPGKPQQNGRHERMHLTLHQGVASPPKATLRAQQRALREFQRDYNFSRPHEALGQRPPAELYVPSARPYPRHLPEVTYPAEFIVRRVEKKGIISWHQSRIFISEALSGEPVGLLPLD 1137
            S  ++C  +G+SR T  KW+ R+   G  GL D  R  H  +N V  + V+ I+  RR HP+ GP+K++V L R      WPA+STI EIL RHGLT  RKR  RT P+T+PF  CD PN +WC DFKGWF T DG+RC+PLT+TD  +RYL+RC  +S T    V+P+ E+AFR+YGLP AIR+DNGAPFASR   GLS+LSVWWI+LGI PERI+PG P+QNGRHERMHLTL Q  A PP    R QQ     F+ ++N  RPHEAL  R P+++Y PS R  P  + + +Y +E I RRV+ +G   W   ++F+S+ L GE +G  PLD
Sbjct:    3 SMAALCRAYGVSRKTGYKWIGRFAESGPLGLDDLPRTPHRHSNEVSEQVVQAILGGRRAHPNWGPKKLRVILLRKDGNIRWPAASTIGEILKRHGLTGRRKRRHRTPPHTQPFGACDGPNAIWCADFKGWFRTSDGRRCDPLTITDGYSRYLLRCQAMSKTDGLSVRPLFEAAFRQYGLPAAIRTDNGAPFASRGILGLSRLSVWWIKLGIRPERIKPGHPEQNGRHERMHLTLKQETACPPAKNHRRQQELFDAFRAEFNQERPHEALEMRTPSDVYAPSCRCCPERVDDFSY-SELITRRVQDRGEFMWRHHKVFLSKVLWGELIGFEPLD 334          
BLAST of mRNA_M-pyrifera_M_contig67621.16324.1 vs. uniprot
Match: A0A176YEQ8_9BRAD (Integrase catalytic domain-containing protein n=2 Tax=Bradyrhizobium centrolobii TaxID=1505087 RepID=A0A176YEQ8_9BRAD)

HSP 1 Score: 363 bits (933), Expect = 1.400e-120
Identity = 185/350 (52.86%), Postives = 229/350 (65.43%), Query Frame = 1
Query:   91 MDQRIRAVMNVINCGLSKVSVCEEFGISRPTLDKWLVRYESEGVEGLRDRSRARHHQANMVDAETVEKIVRFRRDHPDRGPRKIKVELERDFPETTWPASSTIAEILDRHGLTVHRKRNRRTEPYTEPFAGCDTPNDVWCIDFKGWFLTGDGKRCNPLTLTDANTRYLIRCDDVSTTGFEDVKPVVESAFREYGLPRAIRSDNGAPFASRAPRGLSKLSVWWIRLGITPERIEPGKPQQNGRHERMHLTLHQGVASPPKATLRAQQRALREFQRDYNFSRPHEALGQRPPAELYVPSARPYPRHLPEVTYPAEFIVRRVEKKGIISWHQSRIFISEALSGEPVGLLPLDD 1140
            +D+R+R ++ +     +  S C  F ISR T  KWL RY   G  GL D+SRA  H    +     E+ +  RR HP  GP K++  LER +P T WPA+STI  + DR GLTV RK  RR+ P + PFA C+  NDVWCIDFKGWFLTGDGKRC PLTLTDA++RYL+RC  +     E V PV+++AFRE+GLP  +RSDNG+PFASR   GLS+LSV  I+ G+TPERI PGKPQQNGRHERMHLTL Q VASPP  ++R Q + LREFQR YN  RPH+AL    PA+ Y  S R +   L E  Y  +  VRRV   G I  + + I+IS AL GEP+ L   +D
Sbjct:    6 VDERMRFMLAIERGDETIASACRRFNISRKTGYKWLGRYREAGFAGLLDQSRAPLHHPRAISGRIAERCLEVRRAHPTWGPVKVRARLERRWPGTDWPAASTIGALFDREGLTVKRKMRRRSPPSSAPFAHCEAANDVWCIDFKGWFLTGDGKRCEPLTLTDAHSRYLLRCQALPRADTEHVWPVLDAAFREFGLPYHMRSDNGSPFASRGAGGLSRLSVLLIKAGVTPERIAPGKPQQNGRHERMHLTLLQEVASPPARSMREQLKRLREFQRLYNDERPHQALENATPADCYQASTRRFDGILREPEYDDDHEVRRVRHNGEIKLNGNMIYISAALVGEPIVLAENED 355          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig67621.16324.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001804114C1.920e-12853.91integrase core domain-containing protein n=1 Tax=R... [more]
UPI002010ECB53.110e-12854.67integrase core domain-containing protein n=1 Tax=B... [more]
A0A0F9ILC1_9ZZZZ7.790e-12753.50Integrase catalytic domain-containing protein n=1 ... [more]
UPI001CE2D24A6.640e-12553.91integrase core domain-containing protein n=2 Tax=B... [more]
UPI00201345DD8.050e-12353.91integrase core domain-containing protein n=3 Tax=B... [more]
A0A2V8X894_9BACT1.430e-12251.43IS481 family transposase n=1 Tax=Acidobacteria bac... [more]
A0A523IB73_9CHLR5.260e-12251.83IS481 family transposase n=1 Tax=Chloroflexi bacte... [more]
A0A7S7NKH8_9BACT8.950e-12151.53IS481 family transposase n=2 Tax=Paludibaculum fer... [more]
A0A0F9DEW8_9ZZZZ1.190e-12051.95Integrase catalytic domain-containing protein (Fra... [more]
A0A176YEQ8_9BRAD1.400e-12052.86Integrase catalytic domain-containing protein n=2 ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig67621contigM-pyrifera_M_contig67621:1..1140 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score355.1
Seed ortholog evalue4e-95
Seed eggNOG ortholog1038860.AXAP01000005_gene8167
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Integrase core domain
EggNOG OGs1N207@1224,2U1EH@28211,3K65K@41294,COG2801@1,COG2801@2
COG Functional cat.L
Best tax levelBradyrhizobiaceae
Best eggNOG OGNA|NA|NA
Exons1
Model size1140
Cds size1140
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816566.910299-CDS-M-pyrifera_M_contig67621:0..11401622816566.910299-CDS-M-pyrifera_M_contig67621:0..1140Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig67621 1..1140 -
1692278050.8947947-CDS-M-pyrifera_M_contig67621:0..11401692278050.8947947-CDS-M-pyrifera_M_contig67621:0..1140Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig67621 1..1140 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig67621.16324.1prot_M-pyrifera_M_contig67621.16324.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig67621 1..1140 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig67621.16324.1

>prot_M-pyrifera_M_contig67621.16324.1 ID=prot_M-pyrifera_M_contig67621.16324.1|Name=mRNA_M-pyrifera_M_contig67621.16324.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=380bp
MAYRSIRAHGLRFLVLKDFERRLSMPWEETMDQRIRAVMNVINCGLSKVS
VCEEFGISRPTLDKWLVRYESEGVEGLRDRSRARHHQANMVDAETVEKIV
RFRRDHPDRGPRKIKVELERDFPETTWPASSTIAEILDRHGLTVHRKRNR
RTEPYTEPFAGCDTPNDVWCIDFKGWFLTGDGKRCNPLTLTDANTRYLIR
CDDVSTTGFEDVKPVVESAFREYGLPRAIRSDNGAPFASRAPRGLSKLSV
WWIRLGITPERIEPGKPQQNGRHERMHLTLHQGVASPPKATLRAQQRALR
EFQRDYNFSRPHEALGQRPPAELYVPSARPYPRHLPEVTYPAEFIVRRVE
KKGIISWHQSRIFISEALSGEPVGLLPLDD
back to top

mRNA from alignment at M-pyrifera_M_contig67621:1..1140-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig67621.16324.1 ID=mRNA_M-pyrifera_M_contig67621.16324.1|Name=mRNA_M-pyrifera_M_contig67621.16324.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1140bp|location=Sequence derived from alignment at M-pyrifera_M_contig67621:1..1140- (Macrocystis pyrifera P11B4 male)
ATGGCTTACAGATCAATCCGGGCACATGGTTTACGTTTTCTGGTATTGAA AGACTTCGAAAGGAGGCTTTCTATGCCTTGGGAGGAAACGATGGATCAAC GAATCCGTGCGGTCATGAATGTCATAAATTGTGGATTGTCGAAGGTGAGT GTGTGCGAGGAGTTTGGTATCAGCCGACCTACATTGGATAAGTGGCTCGT GCGCTACGAGTCAGAAGGCGTTGAAGGTCTTCGTGATCGGTCGCGTGCTC GGCATCACCAGGCAAATATGGTTGATGCTGAGACGGTCGAAAAGATCGTT AGATTTCGACGCGACCACCCAGACCGTGGTCCGCGTAAAATCAAAGTTGA ACTCGAACGAGATTTTCCTGAGACCACGTGGCCCGCAAGTAGTACTATCG CTGAAATACTCGACCGCCACGGGCTAACAGTCCACCGCAAGAGGAATCGT CGGACGGAGCCTTACACCGAACCTTTCGCGGGCTGCGACACGCCAAACGA TGTATGGTGCATTGATTTCAAGGGGTGGTTTTTAACCGGCGACGGGAAAC GATGTAATCCTTTGACGTTGACGGACGCCAATACTCGGTACCTGATACGG TGTGATGATGTTTCCACCACGGGTTTTGAAGATGTAAAGCCCGTGGTGGA GTCTGCCTTTCGTGAGTATGGCCTGCCACGTGCGATACGTAGTGATAACG GAGCTCCGTTTGCGTCTCGCGCCCCTCGTGGGCTGTCAAAACTCTCGGTG TGGTGGATACGACTCGGCATTACTCCAGAACGTATCGAACCGGGAAAGCC GCAACAAAATGGCCGTCACGAGCGGATGCATCTCACACTGCATCAAGGTG TAGCCTCGCCGCCTAAAGCGACGCTTCGGGCGCAGCAGCGCGCTCTACGT GAGTTCCAGCGAGACTACAATTTCAGCCGTCCACATGAAGCACTGGGACA ACGCCCTCCCGCTGAGCTGTATGTACCTTCGGCGCGCCCCTATCCTCGCC ACCTCCCGGAAGTTACTTACCCAGCAGAATTCATTGTGCGCCGCGTGGAG AAGAAAGGAATAATATCCTGGCACCAAAGTCGAATATTCATTAGCGAAGC GCTGAGTGGCGAACCAGTGGGCTTGCTCCCCCTGGATGAT
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig67621:1..1140-

>mRNA_M-pyrifera_M_contig67621.16324.1 ID=mRNA_M-pyrifera_M_contig67621.16324.1|Name=mRNA_M-pyrifera_M_contig67621.16324.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2280bp|location=Sequence derived from alignment at M-pyrifera_M_contig67621:1..1140- (Macrocystis pyrifera P11B4 male)
ATGGCTTACAGATCAATCCGGGCACATGGTTTACGTTTTCTGGTATTGAA
AGACTTCGAAAGGAGGCTTTCTATGCCTTGGGAGGAAACGATGGATCAAC
GAATCCGTGCGGTCATGAATGTCATAAATTGTGGATTGTCGAAGGTGAGT
GTGTGCGAGGAGTTTGGTATCAGCCGACCTACATTGGATAAGTGGCTCGT
GCGCTACGAGTCAGAAGGCGTTGAAGGTCTTCGTGATCGGTCGCGTGCTC
GGCATCACCAGGCAAATATGGTTGATGCTGAGACGGTCGAAAAGATCGTT
AGATTTCGACGCGACCACCCAGACCGTGGTCCGCGTAAAATCAAAGTTGA
ACTCGAACGAGATTTTCCTGAGACCACGTGGCCCGCAAGTAGTACTATCG
CTGAAATACTCGACCGCCACGGGCTAACAGTCCACCGCAAGAGGAATCGT
CGGACGGAGCCTTACACCGAACCTTTCGCGGGCTGCGACACGCCAAACGA
TGTATGGTGCATTGATTTCAAGGGGTGGTTTTTAACCGGCGACGGGAAAC
GATGTAATCCTTTGACGTTGACGGACGCCAATACTCGGTACCTGATACGG
TGTGATGATGTTTCCACCACGGGTTTTGAAGATGTAAAGCCCGTGGTGGA
GTCTGCCTTTCGTGAGTATGGCCTGCCACGTGCGATACGTAGTGATAACG
GAGCTCCGTTTGCGTCTCGCGCCCCTCGTGGGCTGTCAAAACTCTCGGTG
TGGTGGATACGACTCGGCATTACTCCAGAACGTATCGAACCGGGAAAGCC
GCAACAAAATGGCCGTCACGAGCGGATGCATCTCACACTGCATCAAGGTG
TAGCCTCGCCGCCTAAAGCGACGCTTCGGGCGCAGCAGCGCGCTCTACGT
GAGTTCCAGCGAGACTACAATTTCAGCCGTCCACATGAAGCACTGGGACA
ACGCCCTCCCGCTGAGCTGTATGTACCTTCGGCGCGCCCCTATCCTCGCC
ACCTCCCGGAAGTTACTTACCCAGCAGAATTCATTGTGCGCCGCGTGGAG
AAGAAAGGAATAATATCCTGGCACCAAAGTCGAATATTCATTAGCGAAGC
GCTGAGTGGCGAACCAGTGGGCTTGCTCCCCCTGGATGATATGGCTTACA
GATCAATCCGGGCACATGGTTTACGTTTTCTGGTATTGAAAGACTTCGAA
AGGAGGCTTTCTATGCCTTGGGAGGAAACGATGGATCAACGAATCCGTGC
GGTCATGAATGTCATAAATTGTGGATTGTCGAAGGTGAGTGTGTGCGAGG
AGTTTGGTATCAGCCGACCTACATTGGATAAGTGGCTCGTGCGCTACGAG
TCAGAAGGCGTTGAAGGTCTTCGTGATCGGTCGCGTGCTCGGCATCACCA
GGCAAATATGGTTGATGCTGAGACGGTCGAAAAGATCGTTAGATTTCGAC
GCGACCACCCAGACCGTGGTCCGCGTAAAATCAAAGTTGAACTCGAACGA
GATTTTCCTGAGACCACGTGGCCCGCAAGTAGTACTATCGCTGAAATACT
CGACCGCCACGGGCTAACAGTCCACCGCAAGAGGAATCGTCGGACGGAGC
CTTACACCGAACCTTTCGCGGGCTGCGACACGCCAAACGATGTATGGTGC
ATTGATTTCAAGGGGTGGTTTTTAACCGGCGACGGGAAACGATGTAATCC
TTTGACGTTGACGGACGCCAATACTCGGTACCTGATACGGTGTGATGATG
TTTCCACCACGGGTTTTGAAGATGTAAAGCCCGTGGTGGAGTCTGCCTTT
CGTGAGTATGGCCTGCCACGTGCGATACGTAGTGATAACGGAGCTCCGTT
TGCGTCTCGCGCCCCTCGTGGGCTGTCAAAACTCTCGGTGTGGTGGATAC
GACTCGGCATTACTCCAGAACGTATCGAACCGGGAAAGCCGCAACAAAAT
GGCCGTCACGAGCGGATGCATCTCACACTGCATCAAGGTGTAGCCTCGCC
GCCTAAAGCGACGCTTCGGGCGCAGCAGCGCGCTCTACGTGAGTTCCAGC
GAGACTACAATTTCAGCCGTCCACATGAAGCACTGGGACAACGCCCTCCC
GCTGAGCTGTATGTACCTTCGGCGCGCCCCTATCCTCGCCACCTCCCGGA
AGTTACTTACCCAGCAGAATTCATTGTGCGCCGCGTGGAGAAGAAAGGAA
TAATATCCTGGCACCAAAGTCGAATATTCATTAGCGAAGCGCTGAGTGGC
GAACCAGTGGGCTTGCTCCCCCTGGATGAT
back to top