mRNA_M-pyrifera_M_contig6748.16293.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig6748.16293.1
Unique NamemRNA_M-pyrifera_M_contig6748.16293.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig6748.16293.1 vs. uniprot
Match: K3WYT4_GLOUD (ADP-ribosylation factor n=30 Tax=Stramenopiles TaxID=33634 RepID=K3WYT4_GLOUD)

HSP 1 Score: 358 bits (919), Expect = 1.230e-123
Identity = 173/181 (95.58%), Postives = 180/181 (99.45%), Query Frame = 3
Query:  111 MGLAFSRLWERMFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELRESILLVFANKQDLPNAMSAAEMTDKLGLHGLRHRQWYIQACCATTGDGLYEGLDWLSATLSKRK 653
            MG+AFSR++ER+FGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELR+SILLVFANKQDLPNAMSAAEMTDKLGLHGLRHRQW+IQACCATTGDGLYEGLDWLSATL K+K
Sbjct:    1 MGMAFSRVFERLFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELRDSILLVFANKQDLPNAMSAAEMTDKLGLHGLRHRQWFIQACCATTGDGLYEGLDWLSATLQKKK 181          
BLAST of mRNA_M-pyrifera_M_contig6748.16293.1 vs. uniprot
Match: A0A0P1B1D9_PLAHL (Adp-ribosylation factor n=17 Tax=Peronosporaceae TaxID=4777 RepID=A0A0P1B1D9_PLAHL)

HSP 1 Score: 358 bits (918), Expect = 3.800e-123
Identity = 175/195 (89.74%), Postives = 185/195 (94.87%), Query Frame = 3
Query:  111 MGLAFSRLWERMFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELRESILLVFANKQDLPNAMSAAEMTDKLGLHGLRHRQWYIQACCATTGDGLYEGLDWLSATLSKRK*ACQGGRVLGLWED 695
            MG+AFSR++ER+FGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELR+S+LLVFANKQDLPNAMSAAEMTDKLGLHGLRHRQW+IQACCATTGDGLYEGLDWLSATL K+K   +GG      +D
Sbjct:    1 MGMAFSRVFERLFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELRDSVLLVFANKQDLPNAMSAAEMTDKLGLHGLRHRQWFIQACCATTGDGLYEGLDWLSATLQKQK--SRGGEEAEAMDD 193          
BLAST of mRNA_M-pyrifera_M_contig6748.16293.1 vs. uniprot
Match: M4BN95_HYAAE (ADP-ribosylation factor n=8 Tax=Oomycota TaxID=4762 RepID=M4BN95_HYAAE)

HSP 1 Score: 356 bits (914), Expect = 7.100e-123
Identity = 171/181 (94.48%), Postives = 180/181 (99.45%), Query Frame = 3
Query:  111 MGLAFSRLWERMFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELRESILLVFANKQDLPNAMSAAEMTDKLGLHGLRHRQWYIQACCATTGDGLYEGLDWLSATLSKRK 653
            MG+AFSR++ER+FGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELR+S+LLVFANKQDLPNAMSAAEMTDKLGLHGLRHRQW+IQACCATTGDGLYEGLDWLSATL K++
Sbjct:    1 MGMAFSRVFERLFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELRDSVLLVFANKQDLPNAMSAAEMTDKLGLHGLRHRQWFIQACCATTGDGLYEGLDWLSATLQKKQ 181          
BLAST of mRNA_M-pyrifera_M_contig6748.16293.1 vs. uniprot
Match: A0A7S2W572_9STRA (ADP-ribosylation factor n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W572_9STRA)

HSP 1 Score: 350 bits (899), Expect = 2.320e-120
Identity = 168/181 (92.82%), Postives = 176/181 (97.24%), Query Frame = 3
Query:  111 MGLAFSRLWERMFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELRESILLVFANKQDLPNAMSAAEMTDKLGLHGLRHRQWYIQACCATTGDGLYEGLDWLSATLSKRK 653
            MGL FSR+W+RMFG++EMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEY+NISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDR+DAARDELHRMLNEDELRESILLVFANKQDLPNAMSAAEMT+KLGLH LR R WYIQACCATTGDGLYEGLDWLSATL+K K
Sbjct:   15 MGLTFSRIWDRMFGRREMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYRNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRIDAARDELHRMLNEDELRESILLVFANKQDLPNAMSAAEMTEKLGLHNLRGRSWYIQACCATTGDGLYEGLDWLSATLTKNK 195          
BLAST of mRNA_M-pyrifera_M_contig6748.16293.1 vs. uniprot
Match: B8BS84_THAPS (ADP-ribosylation factor n=39 Tax=Eukaryota TaxID=2759 RepID=B8BS84_THAPS)

HSP 1 Score: 349 bits (896), Expect = 4.200e-120
Identity = 171/183 (93.44%), Postives = 178/183 (97.27%), Query Frame = 3
Query:  111 MGLAFSRLWERMFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELRESILLVFANKQDLPNAMSAAEMTDKLGLHGLR--HRQWYIQACCATTGDGLYEGLDWLSATLSKRK 653
            MGL FSRL+ERMFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSND DR+DAARDE+HRMLNEDELR+++LLVFANKQDLPNAMSAAEMTDKLGLHGLR  +RQWYIQACCATTGDGLYEGLDWLSATL KRK
Sbjct:    1 MGLTFSRLFERMFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDSDRIDAARDEMHRMLNEDELRDAVLLVFANKQDLPNAMSAAEMTDKLGLHGLRPSYRQWYIQACCATTGDGLYEGLDWLSATLVKRK 183          
BLAST of mRNA_M-pyrifera_M_contig6748.16293.1 vs. uniprot
Match: A0A7S1TNC0_9STRA (ADP-ribosylation factor n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TNC0_9STRA)

HSP 1 Score: 338 bits (867), Expect = 1.050e-115
Identity = 161/180 (89.44%), Postives = 171/180 (95.00%), Query Frame = 3
Query:  111 MGLAFSRLWERMFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELRESILLVFANKQDLPNAMSAAEMTDKLGLHGLRHRQWYIQACCATTGDGLYEGLDWLSATLSKR 650
            MGL+FS +W R  G +EMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQG+IFVVDSNDRDRVDAARDELHRM+ EDELRE+ LLVFANKQDLPNAM+AAE+T KLGLH +RHRQWYIQACCATTGDGLYEGLDWLSATL+KR
Sbjct:    1 MGLSFSAIWARFMGNREMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGVIFVVDSNDRDRVDAARDELHRMMGEDELREATLLVFANKQDLPNAMNAAELTQKLGLHDMRHRQWYIQACCATTGDGLYEGLDWLSATLNKR 180          
BLAST of mRNA_M-pyrifera_M_contig6748.16293.1 vs. uniprot
Match: A0A7S0J417_9EUKA (ADP-ribosylation factor n=2 Tax=Prymnesiophyceae TaxID=2608131 RepID=A0A7S0J417_9EUKA)

HSP 1 Score: 331 bits (849), Expect = 1.020e-112
Identity = 159/183 (86.89%), Postives = 172/183 (93.99%), Query Frame = 3
Query:  105 GTMGLAFSRLWERMFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELRESILLVFANKQDLPNAMSAAEMTDKLGLHGLRHRQWYIQACCATTGDGLYEGLDWLSATLSKRK 653
            GTMGL FS+++ ++FGKK++RILMVGLDAAGKTTILYKLKLGE+VTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQG+IFVVDSNDRDRV  ARDELHRMLNEDELRE+ILLVFANKQDLPNAM+AAE+TDKLGLH LR R WYIQ+ CATTGDGLYEGLDWLS  LSK K
Sbjct:   16 GTMGLTFSKVFGKLFGKKDVRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGVIFVVDSNDRDRVGEARDELHRMLNEDELREAILLVFANKQDLPNAMNAAEITDKLGLHSLRQRNWYIQSTCATTGDGLYEGLDWLSTALSKAK 198          
BLAST of mRNA_M-pyrifera_M_contig6748.16293.1 vs. uniprot
Match: A0A5D6YTC8_9STRA (ADP-ribosylation factor n=3 Tax=Stramenopiles TaxID=33634 RepID=A0A5D6YTC8_9STRA)

HSP 1 Score: 326 bits (836), Expect = 3.160e-111
Identity = 158/164 (96.34%), Postives = 164/164 (100.00%), Query Frame = 3
Query:  111 MGLAFSRLWERMFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELRESILLVFANKQDLPNAMSAAEMTDKLGLHGLRHRQWYIQACCATTGD 602
            MG+AFSR++ER+FGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELR+SILLVFANKQDLPNAMSAAEMTDKLGLHGLRHRQW+IQACCATTGD
Sbjct:    1 MGMAFSRVFERLFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELRDSILLVFANKQDLPNAMSAAEMTDKLGLHGLRHRQWFIQACCATTGD 164          
BLAST of mRNA_M-pyrifera_M_contig6748.16293.1 vs. uniprot
Match: K0RB38_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RB38_THAOC)

HSP 1 Score: 330 bits (845), Expect = 5.580e-111
Identity = 161/171 (94.15%), Postives = 167/171 (97.66%), Query Frame = 3
Query:  147 FGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELRESILLVFANKQDLPNAMSAAEMTDKLGLHGLR--HRQWYIQACCATTGDGLYEGLDWLSATLSKRK 653
            FGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSND DR+DAARDE+HRMLNEDELR+++LLVFANKQDLPNAMSAAEMTDKLGLHGLR  +RQWYIQACCATTGDGLYEGLDWLSATL KRK
Sbjct:  103 FGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDSDRIDAARDEMHRMLNEDELRDAVLLVFANKQDLPNAMSAAEMTDKLGLHGLRPSYRQWYIQACCATTGDGLYEGLDWLSATLVKRK 273          
BLAST of mRNA_M-pyrifera_M_contig6748.16293.1 vs. uniprot
Match: A0A7S2WSJ8_9STRA (Hypothetical protein n=3 Tax=Stramenopiles TaxID=33634 RepID=A0A7S2WSJ8_9STRA)

HSP 1 Score: 327 bits (839), Expect = 8.370e-111
Identity = 155/182 (85.16%), Postives = 172/182 (94.51%), Query Frame = 3
Query:  108 TMGLAFSRLWERMFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELRESILLVFANKQDLPNAMSAAEMTDKLGLHGLRHRQWYIQACCATTGDGLYEGLDWLSATLSKRK 653
            TMGL  S++ ER+FGK EMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETV+YKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDR++ AR+ELH+M+NEDELR++++LVFANKQDLPNAM+AAE+TDKLGLH LR R WYIQA CATTGDGLYEGLDWLSATL+K +
Sbjct:   41 TMGLHISKIMERLFGKTEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVDYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRIEPAREELHKMINEDELRDAVILVFANKQDLPNAMTAAEITDKLGLHSLRSRNWYIQATCATTGDGLYEGLDWLSATLTKNR 222          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig6748.16293.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
K3WYT4_GLOUD1.230e-12395.58ADP-ribosylation factor n=30 Tax=Stramenopiles Tax... [more]
A0A0P1B1D9_PLAHL3.800e-12389.74Adp-ribosylation factor n=17 Tax=Peronosporaceae T... [more]
M4BN95_HYAAE7.100e-12394.48ADP-ribosylation factor n=8 Tax=Oomycota TaxID=476... [more]
A0A7S2W572_9STRA2.320e-12092.82ADP-ribosylation factor n=2 Tax=Rhizochromulina ma... [more]
B8BS84_THAPS4.200e-12093.44ADP-ribosylation factor n=39 Tax=Eukaryota TaxID=2... [more]
A0A7S1TNC0_9STRA1.050e-11589.44ADP-ribosylation factor n=2 Tax=Phaeomonas parva T... [more]
A0A7S0J417_9EUKA1.020e-11286.89ADP-ribosylation factor n=2 Tax=Prymnesiophyceae T... [more]
A0A5D6YTC8_9STRA3.160e-11196.34ADP-ribosylation factor n=3 Tax=Stramenopiles TaxI... [more]
K0RB38_THAOC5.580e-11194.15Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
A0A7S2WSJ8_9STRA8.370e-11185.16Hypothetical protein n=3 Tax=Stramenopiles TaxID=3... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig6748contigM-pyrifera_M_contig6748:3312..12767 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score372.1
Seed ortholog evalue1.5e-100
Seed eggNOG ortholog2880.D7FGX4
Preferred nameArf1
KEGG koko:K07937,ko:K07977
KEGG Pathwayko04072,ko04144,ko05110,ko05134,map04072,map04144,map05110,map05134
Hectar predicted targeting categoryother localisation
EggNOG free text desc.GTP binding
EggNOG OGsCOG1100@1,KOG0070@2759
Ec32 ortholog descriptionArf1, ARF family GTPase
Ec32 orthologEc-11_000980.2
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04031,ko04131,ko04147
Exons5
Model size801
Cds size546
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816565.0176387-UTR-M-pyrifera_M_contig6748:3311..34131622816565.0176387-UTR-M-pyrifera_M_contig6748:3311..3413Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig6748 3312..3413 +
1692278049.7014306-UTR-M-pyrifera_M_contig6748:3311..34131692278049.7014306-UTR-M-pyrifera_M_contig6748:3311..3413Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig6748 3312..3413 +
1622816565.0320876-UTR-M-pyrifera_M_contig6748:4408..44161622816565.0320876-UTR-M-pyrifera_M_contig6748:4408..4416Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig6748 4409..4416 +
1692278049.7174966-UTR-M-pyrifera_M_contig6748:4408..44161692278049.7174966-UTR-M-pyrifera_M_contig6748:4408..4416Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig6748 4409..4416 +
1622816565.090947-UTR-M-pyrifera_M_contig6748:12622..127671622816565.090947-UTR-M-pyrifera_M_contig6748:12622..12767Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig6748 12623..12767 +
1692278049.7717314-UTR-M-pyrifera_M_contig6748:12622..127671692278049.7717314-UTR-M-pyrifera_M_contig6748:12622..12767Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig6748 12623..12767 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816565.0441577-CDS-M-pyrifera_M_contig6748:4416..44821622816565.0441577-CDS-M-pyrifera_M_contig6748:4416..4482Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig6748 4417..4482 +
1692278049.7279496-CDS-M-pyrifera_M_contig6748:4416..44821692278049.7279496-CDS-M-pyrifera_M_contig6748:4416..4482Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig6748 4417..4482 +
1622816565.054885-CDS-M-pyrifera_M_contig6748:6049..61761622816565.054885-CDS-M-pyrifera_M_contig6748:6049..6176Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig6748 6050..6176 +
1692278049.7366543-CDS-M-pyrifera_M_contig6748:6049..61761692278049.7366543-CDS-M-pyrifera_M_contig6748:6049..6176Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig6748 6050..6176 +
1622816565.0658858-CDS-M-pyrifera_M_contig6748:9495..96861622816565.0658858-CDS-M-pyrifera_M_contig6748:9495..9686Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig6748 9496..9686 +
1692278049.7473316-CDS-M-pyrifera_M_contig6748:9495..96861692278049.7473316-CDS-M-pyrifera_M_contig6748:9495..9686Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig6748 9496..9686 +
1622816565.0806863-CDS-M-pyrifera_M_contig6748:12460..126221622816565.0806863-CDS-M-pyrifera_M_contig6748:12460..12622Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig6748 12461..12622 +
1692278049.7613893-CDS-M-pyrifera_M_contig6748:12460..126221692278049.7613893-CDS-M-pyrifera_M_contig6748:12460..12622Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig6748 12461..12622 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig6748.16293.1prot_M-pyrifera_M_contig6748.16293.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig6748 4417..12622 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig6748.16293.1

>prot_M-pyrifera_M_contig6748.16293.1 ID=prot_M-pyrifera_M_contig6748.16293.1|Name=mRNA_M-pyrifera_M_contig6748.16293.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=182bp
MGLAFSRLWERMFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIG
FNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRV
DAARDELHRMLNEDELRESILLVFANKQDLPNAMSAAEMTDKLGLHGLRH
RQWYIQACCATTGDGLYEGLDWLSATLSKRK*
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mRNA from alignment at M-pyrifera_M_contig6748:3312..12767+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig6748.16293.1 ID=mRNA_M-pyrifera_M_contig6748.16293.1|Name=mRNA_M-pyrifera_M_contig6748.16293.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=9456bp|location=Sequence derived from alignment at M-pyrifera_M_contig6748:3312..12767+ (Macrocystis pyrifera P11B4 male)
CCCACCGAAAACTGAGAACATCCGCGCTCCCGAGCCCCTGCCAAGTCGAA CAGGAGCCCGTACAGTGCACAAGAGACAGGAATCCGTGTCTGGTGGGGGT AGGTGAGTAAGCCGCTGGTCGCACTCACGGACACGGGCGGCTTTTTGGCG ACTTTTTCTTCTGTAGACGAGTGATGCCGAAGAGTATATATACCTGGTAG GCATTCCTGGAGGGATGGTCAGAGAGAGCCCTCGGCGGAAACCAGCGGGA TGTCCATTCCCTGCAGGGCCAACGTGGCGTAGCCGTGCCATAAGCGTGAC TGCTGCAGCTAGGCATGTAGATGCGGGATGGGACCGGGACCGGGATCGTC ATTATTCTCGTGCTCGACCCATTTTGTTGAGCTCTCGCTTTGGTTTATCA GACCCTCGTCTGTGCTCCGCAGAGATCTTGGAATTGGCGCGAAGCCAAGG CAGGAGGAGGGCTAGAGCGGGACGCCAGGGGCTTTACGCCTGCTGCGGCA TAGCACATCCGAAGGCTTTTGAAATTGGCGGCAGGGGGGTGTTTCGCCCC ATTTCCGCCGCGAATGGAACAACTCGTGTTTTTGTTGTTGGAAAGTGCGA AAAACAACACACCCGAAAGCGTATTCGTAGACGTGTAGTTTGTTCGAGGG GCTGCTCTCTCTACATTTTCCGAGCTGCGAAAGAAAGTGAATCAGAACAT ACCTAAGAAACTAAAGCAGAAAACAGGGGGAACCCTTCCGGCATTGCGCA GGCAAGCAATCCCGACGACACTCCCTATGTGTGGTGTACGTCACCCTCCA ACGGCCGACAACAGTCAGTTCGCAGGATTTTGCAGGGGCTATGCTCGCCC TGGGCAGGGGGTCTGGCCCCCAGGGGCGGGGCTGGTCGCCCCCCCCCCCC CCTGTACCTTCTGATTTTTGTGCGGAGAGTCCGCTAATGGTTTTAATCCC TCCGTTCTCTCGCCACTACTGCTGTACGTACGAGTATATTCGTGCGTCGT GCGGCCGTCCTGCCCAAAACTTACTATTAATAATGTATGGTACCAGTGCT TGACTAGACTTGATTGTTCTGCGTGCTGCGCGCTTGCTCCTCATTAGGCG GAACCATGGGGCTCGCATTCTCGAGACTGTGGGAGCGTATGTTCGGGAAA AAGGAGATGCGTATCCTCATGGTGAGTGGGGAGGGCTGCGAGGCGGCTAT GTAAGGAACAACACTTACGTACTGCTGCTCTATGTACGCAGTGGCCTCGT CGTGTTTCTGCGTTTTTGTTCTTCTGGACTATATGTACAAGTAACTTGCG TGAAAAGTGCTGCGATCGCTGTGGTTTGTGATTGTTGTACGATACGTGCA GGTAGGTACTGGTCTGTCTGTATTTATAGCCTGTATAGCGCATTACGCTC GGGGGACAAGCGACTGCTGGGTTTTGTTTGTCTGCGTTGTTTTCGCAAAC TTTCGAAACTTCGGTTTGGTCGTCCGTTAGCTTGACCCAGTCGGTATACC TAGTATCTGTAAAAGACAGCTGGTACGTACAGCTATTATATGTTGCCTAC TGCTGTGCCCCGGCTGGCCTCGGTTGAGTTGCTCAGGCTGGTGTACAATA TTTGTGCCCGGTTCTTTGACAATACATGGTATTAATAGTAAGTAATGTAC ACACAGCAGTACCAGGTGGGTTATATTCCAATCCAAGCCTGCAGAAGTAG TTTTTTATATGAACGTACAGCTGGCCGCTGTTTTCATTTCTCGAACTGCG TGTTTTTTCGTAGCGGTGTGTCGAACCCTACATCGTGAAGACCTCTGATA AAATCGGTTTGTTGTTGGACAAGGGGAGGAAGGACACGAGGACGTCATCA CATGCGTCGTTATTCAATGTTGGGCAGGAACCGTCTTTGGTTCCCACGCC CCCTCTGTCTATATTCGATGTATCGACGTGCAGATATTAAATAAATGTTT TCGCCCTCGCCCCCCCCCCCGGCATATTGACAGGTATTCATGGTACGTGG TCATAGGCTGGATATTGCTCTTTTTGACCAGAAAGCTATTATACGTATAT ATGACACGAGCAGAGCAGTATTAATGAGTAAGATTCATATTCCTCGTCAT ACCGGTGACTCCTCTCTCCTCTCACCGAAGTATTATGTCCATGCATGTCG TACGTAAGGCACTGCTCGTGCGAATTGGTGGGTGAATTTTGCCGGGCATT CTCTGCTGATTTCGTAAGGGTTTTAACTTGCTGTGTTTTTTTCGTTAGGC AAAGGGAACTCGTTGCTTGATTTTTTGTTGAGACAGCTGGCTGCCACGTA CGCACTACGTAGGTGACATGCTTTGCTTAACATTGTTAGCTCTGAGTGCA GCAAAACAGTTCTACCTGAAGGGCTGCCTATATATGTGTATTCTGAAAGT AAGCTGTGGCTCAGCATCTCAGAATGCTTCGTCTACTATTTTTTTGGACA GATTTGCTGACAAGTGCCGCATTTTTCAAGTCCGTATAATGGTACAAACG TCGTTCGGATGTATGGTACCAGTATATGTTACTGGAGTACCATTTCCAGA CCTTGCGTTTTGTGTTGCGTATTTCGTTTTCTCGTTTTATTTTGTGATTT TGACCCCCGTCTGGTGTTACGTACCTCGTTCGTCTGTATAAGATGCACGT CAGTCGCATATAATATTTTTTGGTCGTGTCTCGTTTTGAATCATTTTGTT TTCACTTGAAATTGTTGTTCATATGACGCTGAAAATAGGTGGGTCTGGAC GCAGCCGGTAAGACCACTATCCTGTACAAGCTGAAGCTCGGGGAGGTGGT GACGACTATTCCCACCATCGGGTTCAACGTGGAGACTGTAGAATACAAGA ACATTAGCTTCACAGGTCAGTGCGAGAGGGTGGGTGGATGGGTGGGTGGG TGCATCGTACTCTTGGAAGTCTGTAAGTGTTGGTGCTCGCTCGTATTGTT GCTATTAAATAGAACGTACTCTTCGAAGTGAAAAAAGTGTTGATGCTTGC TCGTGTTGTTGCTGTTAGTAGAACATGGTGGTTTGTGTACGCATGCCCCG CTGTACGTACATGGAAGCCACAATCAACATTCAGTCGTTGCAAAGAGATC TCTGAAACAACTGCCGCCACGATGGCCTCCTCAGGGGGTCAGTCTGGCCC CCAAGATAGGACCAGGTCGTGGGTGTCCTGGACTAAAGGTGTGCGGAAGA ACGCTGTGGAGATCCTCTTTGTGCATGCCGCTATGCCATGACTTCCATGC CCTTGCCGTCTTTTTTCGGACGAGATTGGTTGTCATACGAGGCCATCGTG GAGGCAGGAAAGCGTTCTTCCGCATGCCCTTTGTCTTGGATACATACTTA TACTATCCACGCCCTGGCCGTCTTTTCTGGGATCAGATTGATATGGAGGC CATCATGCTATATAGGTGTCTCTGAAGTTTCTTTACAACGATCGACAGTT GATTGTTTTCTTGCACTTTACAGCGGGGGTTGCGTTTGGGTGTGTGTGGC GAGTGGTTGAAACTTTCCTGATTGGACGATGCAGAGATCATTCCGCACGA AATGCCGAGCATAGACGCCTTGTACTAAAAGGAGGTGGTAGCCCGAAAAT ACCACACGATGAACCACCAGCATCTGTTATCCGGTTTAAATCCTAAATGC ACAACGACAAACATTTTGACGGCTATGGGACATACCAGGTACACCGTAGT TCCCGCACATTCTCCGTCAGATGGGACAACGCAAATACAAGACGATTAAA ACTGGACGGGACGATTTGTTTGCAGTTTTTAACCCTTTTGGTGTGTACTG CAGTCCCGTTTCTGAACAAACCACTCAAATTGTAAGTAGTTTGTCCCCAA AGCGGGACTGTGGTCCTAAAAGGGTTCACCATCTGTGCGTAAGGGTGGCT GTATTGTTTGTTTCGGTGTGTGGTGCTTGGTACTGCTGTCCCTCTTATAT TTTAGGGTAGGACGATTTTACTGTGCTATCAATGCAAAACATGTTTTTGA CGTCTTGGCCGCCGACATTCTCCAGTTGTGGAGATGTGAAATGTGAACGG CGGATAAACGTGACGGACTGCAGGTCCTTAAAATATTGATTTGATGCAAA GACTCGCGTGTATATCTTACGGCAGTCTATATACAGGGAGTACGTTTTGT GTTTGGAGTCGTATGTGTGCTATTAATATTAGTGATGCCTAGTATTTTGA AAATTGAAGGGCATCTAAGTGTCACACCTCCCAGTGTTGGCCGCACACGT TTGTTTGTGTTGAGAGTCAAGAATCGTCGCGCCTCGCCTGCACCTTGCTC GAATAGTATACATGGTACCAGTAACCAGTACCAGGTACTTGATTATGGTC ATACCGCATACTTAGTGCCCACGTATCGTGCTGTTCTCGTGTGCCCTCAA AAATAGACTATTAATACCAGGCACCAGGTACACGAGAAACATTTTGGTGG ATATCTTGAACCCCACACCTGTCGTAATGCTGTTGCTGTAGTTTTTCCGC GCAAGATGCTGTACACTCAAAGCTCAAAAAGCAGCAGCATCTAGAGCTTG TCGTACGTACTAGAAATACTTCAGCAGTAGTACGTGGTACGTTGTTTATT TTTGAATATTAAATTAGTACGGTAGTTGGTATGATAAGTTAGTTACTGTT GAATGGGCGGATCGTAGTCTAAGTAGGAGACGAAGTTGTACCAAAAATGT CAACTTGATGTTACACTATCTAATCGATGCTAAAGCTACAATCGCCTGGT ACTGTTTGTTGTACTGTTATTATTGGTTGGCTTGGCCAGTGTGACATTGG CTTCTGAGCCGTCGGATTTTCCAGTTTGTGACGGTAGGGTAGGGTAGGGT AGAACTCTGTCAACGACGGCTACCTGTGACTGTTATGTTGGTATTGGAGT GAGTGTGTGTGTGTGTGTTCTTCACATTAGACCGTTCTTTCTATTGTACC CGTCTACATCCAGCACAACAAGTGCCCTTGCCGATTCTTCGATCCTGTAG AGTTACAAGTTCTGTGGTCACAAAACTACACAAGAGATTCTACATTGTTA CCTGGTACGCGGTAAGCAGAGTAGACAACGCAATGCGATGCCATCGTACT ACTGCTGTAGATACGACAGACACGAACGACATACACATTCTATGAAAGAG ATGACAAAGAAAACAAACAAGAACAAAAAAAACAGAGAGCAAAGAAACAA ATCAAAGAGAAGAAGGAAGTACGTACTGGTAGTCGTAGACTAGTCTGGTC CTTCAGCTACTATCATACTTTCCCACCCCGAATAAGCGGTATCGGTGCTG TCCATGGTTGGACTCGGTGTTGATGCGATAGAGCGTGGAGACGTGCGCAA ACGCGGGGTTTCCAAGTCGTCCGGAAGGCCTTTGACACCGTCAGTGTGTG CAACACGTACGCGGCTAATTCTAACCTTTCTATTTATAATCCGTGAAGGA CTGCAGTCCCGTTTTGGGGACAAACTACTTGAAGTTTGAGTGGTTGTCCT CAAAACGGGACGTCAGTCCGAAAAGTGCAAGTCACGACCTCTTGTCATTG CGTGCTCGAATACCTCGCCCAGAGCTGAGCTATCTTTAGGAGCGCCACTT CTTCAGTTCCGTCTTCTACTACAGCAATGCGAAAACAGTACCACTCTTTC TTCAGACATGGAGCTATGAGTTAAATTTGCACACGACACCAAATCTGAAC GTGGAAGTGTGATGCGCTTGAGCTTTATTTTATCCTTTCCGCGGAGGATT TTAAAAAAAAAAATGTAACTTTTTTGTCCTTGGTAATGAACTAAGAACAA CCCTTCCCTTTGTATCCATTGATTTCTTTGCACCTCCGAGGCACGCGATA TGTATATATAATATTAATGGCAACATACATACCAGGTATGTAACTATACT GGTATATACCGAATCAACATATTTTCTGGAGTCTGGAGCCATGACACAAC GCTCAATTTTCGTTTTGGTGTATGTTTCCGTGTATGCTATCCCCCTCCCT CTCTTGGCTTGGTTTGACTCGGCTCGCATTTGGGGTATACCTGGGTGTCT TTATTTTCAGGAGTCTGGAGCTCCTGACACAACGCTCAATTGCATTTGTT CCGCGTTTGTTCACGCTTGTGCCTGTGTTTTTCCCTCTGACTTGGCTTGG TCCGGCTCGGCTTGATGCGGCTTGCTGTGAGCAGTTTGGGACGTCGGAGG GCAGGACAAGATCCGTCCGCTGTGGAGGCACTACTACCAGAACACGCAGG GACTGATTTTCGTGGTGGACTCTAACGACAGAGACCGCGTCGACGCCGCA CGGGATGAGCTGCACCGTATGCTCAACGAGGACGAACTGCGCGAGTCGAT TCTACTGGTGTTCGCTAATAAACAGGTGAGTTACCAAATTACGCTGAACT TTGTTGGGGTGTTGGTTATTGATATCATAGCTGTTTTCTCTCACAGCAAC CAACCATTGTTGACATTTTCCATGAACGACCTGCACGGCGGCATGTATGC CTACCTACCTGTACTAACGGACAACTCCGCTGTTTTCGGGGGGGCTTAGC AATCAGCGCGCACGATGACCCCAAAACCTTGGATGTCCCTATGTTTGTTG CCGTAGTGATCATTTTTGGTTCTGAGCATTTTTGGTTCTGACTACTGTTA TTAATATTAATAATACGATATGACATGGTCCCTCGTCATTTAACAGTCCA TGCTTCTCCTGTTGGCTATTAATGGGCCAGGAACAGGCGGAGGGGGTGTG GCTGGTTGTATGGCTGGTTTCACGTTTAGCTTATTATATATTAATAGCTG TTTTCCCTCGCCCACAACTCAAATATCGTTGGAATTGTTTTGTGGACATG ATTAGGAGACGGGGCGCTTGGAATTGGGGTTGGAAAATCATGAAAGTAGT GGTTGGGGTTCAGACATTAGCTTGGAAAATTATTGTAGTTGAAGGATAAC ACTCTGCTTACTGGATAACAATGTATTTCAGTATCTCTGTGGCGTAGTTT CGTGACCACAGAACTTGTACGTATCATCTAGGCTTCAGGAATCAAGGACA CTGGTTGTGCTGGATGTCGACGAGTAGAAGTAACGGTTTATTGTGGAGAA CGCACAATTAACCCTTGGAACAGCGACGCTTGCAGTATCGGACTCCGAAT TGCAGTACGACAGCAGTTTGTCCCCGGTGCATGCTTTTCACGAGAGGTTC AGTTTAATTTACAATAGATGCACTACCAACAACAGTTGCTGTTACAAAAG GGTTATCCTCCTTTTTCGTACCAGGTACACCCGTACGTTCCAACCTTTGG AGAAGTAGCCGACGGTTGTACACTCGGCATACGTTGTAGGTCGTACTGCC TATGATCGAAGAGTTCCGCCCAAAGTTTTGAACTTGTTCACGTACCTGTA TTGGAGTAGGTTTTGCAGTCTGGGAGAAAGGATCTCTAGGGGTGTTTTTG ACTTGAAAATTGCGCAGCGCGGTCTGCACTTCGGAATCGGCGTCCGCAGT TGAGAAGATTCCCGGTTCGATGCAAACGCGGCGTTTCGCCGCGTTTGTGG CAAGTTTTGGCCCGTTTTGGCTGCGGTTTGGGGTTAGGGTTAGAGTCAGG AGTTGGGTTGGGTCTTCGCCGTACCTTGATCCCAACAGAAACCAAAATAC CTGAACAGCCTGCCAACCTAAAGATCTAAAGATCCTTTCTCCCAGATTGT AACGGGACCTCCTTTATTGAGGGGAAAGCCATAGCCGTAACCGGTTCTGA CTCTTAATATCGTAATCTGTCCCAGAAATCGCAGGTGGGCATCAATCACA TGCCGTCTTTGACCAAATTGGCGCAGCTGTCGCTGTCGCCAATATTGATG TATTTGTGGTAGTGGACCCAATAACATTGCTCGTTTTTCAGCACCTGCGT GCATGCATATCTTGATCAAGCAGCCTTTGTGCTTGCGTATTGTATGCTCG TTAAAGTCGAGTTTGTTTCTTGCGGTTCGTGTAGCCAATACGAGGAGTTA CTCGGTGCGCTTTTTTTTTGTACATTTCGCATTGCCCACAATTTGTGGCA ATCAAACCGTACTATTACGGAGGACCATAGTTAATAGGACCTACGGTGTA CATAAAAACCTATATATTTACATATTTTTACTAACAATATTTGGTCCTAT TTACTGTGGCCCCCCGTAATACCAGGTATGTCTCTAAAGACCAGTGCCAT GAAGGACGCCTTTGCGGTGCATGACATGTTGCGCAGTAACCGTAACATGC AGATCCCATCGGGCGAACAGAGCCGTGTGAGCCGTGTCGTATCATCAGAG ATACCTGTGATCCGTGTCGAATAGCTTGACGTGCGTGCAGATCTATCACA TACTTTACCCTGAAATACCTGCTGGGTATCAGTCAGGTGTCGGGTGTAGT GGGATGTGCGTGGCTCACGACCCAAAGGCCTCAGATCTCTCTAGCGTGTC ACTCGTGGCCATATTGGAATGTTCGATCGTTTGGGTTAGGCACCAAACAG CATGAGTACTCGTTATGCACAAATAGAGGCCGGTGTTCATAGAGGGATCG ACAAATGTTGTGACGTTTACGTTTTGTTTCTGAACTTTATCGGTTGCATC TTGCACTGCTGAGGATATTTCGGTACATTTTTGCGACCATCATGTCAAGG ATTCACCCGTTATTATTTAAGTGATGGATGTCTCGCTTCGGGGGATATTT CAAAAGCCACTATTTTGGCTGTGTGTGCCCCCCTTGGTTTGGAATCATTC GCCTCGGTAATTCGTCCCAGGGGGTGTGTTATCTTATCACCCCCCTGTGA TGCGGTAAAACACTGTACCAGGTATAAACAGTGGCGATACCAATTTCTTT TTGAACGAAAATTGCTCTTGGGTTCGCGTTTCTGGAGCAATGATGTACTG TATGTGTCTGCCGACGGTGGCACGGTTGCACAAACTTTCTTTTACCCAGC AACACGTAATCCACAAAATGGTGTCAAGTCTCGGGCATGTCTTCGCTATA CGTTTTTTTCTTCTCCGGTATTCGATGCGTCATTTGGCCTGGTTATGTAG CATGAGAACAACCAGTAACGCCCCGCCCCACCGCACCCCGCCCTCTGCTT GGCTTGATTGACCCCTCGTGTTGCTCCGCCTGTCTCTTCGAATATTTAGG ACCTCCCCAACGCGATGTCTGCAGCGGAGATGACCGATAAGTTGGGCCTT CACGGTCTGCGCCACCGGCAATGGTATATCCAGGCATGCTGTGCCACAAC GGGCGACGGTCTTTACGAGGGCCTTGATTGGCTCTCGGCCACCCTCTCGA AGAGGAAGTGAGCTTGCCAAGGGGGAAGAGTCTTGGGGCTGTGGGAGGAT GTAGGGAGGGAGGGCTGTGGATCACCCTCGTTGTTCCTAGTTGCTTGCGG TGCACTCGGGCTGCTGGGAGAAAGAATAATTCGCTTTTGGGGGTGGACCA TATTGT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig6748:3312..12767+

>mRNA_M-pyrifera_M_contig6748.16293.1 ID=mRNA_M-pyrifera_M_contig6748.16293.1|Name=mRNA_M-pyrifera_M_contig6748.16293.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1092bp|location=Sequence derived from alignment at M-pyrifera_M_contig6748:3312..12767+ (Macrocystis pyrifera P11B4 male)
ATGGGGCTCGCATTCTCGAGACTGTGGGAGCGTATGTTCGGGAAAAAGGA
GATGCGTATCCTCATGATGGGGCTCGCATTCTCGAGACTGTGGGAGCGTA
TGTTCGGGAAAAAGGAGATGCGTATCCTCATGGTGGGTCTGGACGCAGCC
GGTAAGACCACTATCCTGTACAAGCTGAAGCTCGGGGAGGTGGTGACGAC
TATTCCCACCATCGGGTTCAACGTGGAGACTGTAGAATACAAGAACATTA
GCTTCACAGGTGGGTCTGGACGCAGCCGGTAAGACCACTATCCTGTACAA
GCTGAAGCTCGGGGAGGTGGTGACGACTATTCCCACCATCGGGTTCAACG
TGGAGACTGTAGAATACAAGAACATTAGCTTCACAGTTTGGGACGTCGGA
GGGCAGGACAAGATCCGTCCGCTGTGGAGGCACTACTACCAGAACACGCA
GGGACTGATTTTCGTGGTGGACTCTAACGACAGAGACCGCGTCGACGCCG
CACGGGATGAGCTGCACCGTATGCTCAACGAGGACGAACTGCGCGAGTCG
ATTCTACTGGTGTTCGCTAATAAACAGTTTGGGACGTCGGAGGGCAGGAC
AAGATCCGTCCGCTGTGGAGGCACTACTACCAGAACACGCAGGGACTGAT
TTTCGTGGTGGACTCTAACGACAGAGACCGCGTCGACGCCGCACGGGATG
AGCTGCACCGTATGCTCAACGAGGACGAACTGCGCGAGTCGATTCTACTG
GTGTTCGCTAATAAACAGGACCTCCCCAACGCGATGTCTGCAGCGGAGAT
GACCGATAAGTTGGGCCTTCACGGTCTGCGCCACCGGCAATGGTATATCC
AGGCATGCTGTGCCACAACGGGCGACGGTCTTTACGAGGGCCTTGATTGG
CTCTCGGCCACCCTCTCGAAGAGGAAGTGAGACCTCCCCAACGCGATGTC
TGCAGCGGAGATGACCGATAAGTTGGGCCTTCACGGTCTGCGCCACCGGC
AATGGTATATCCAGGCATGCTGTGCCACAACGGGCGACGGTCTTTACGAG
GGCCTTGATTGGCTCTCGGCCACCCTCTCGAAGAGGAAGTGA
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