mRNA_M-pyrifera_M_contig673.16267.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig673.16267.1 vs. uniprot
Match: D8LF01_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF01_ECTSI) HSP 1 Score: 1788 bits (4631), Expect = 0.000e+0 Identity = 1059/1883 (56.24%), Postives = 1257/1883 (66.76%), Query Frame = 1
Query: 19 GAPPEPWESAIGDTSERVGRQGRAVIDYAAKMQAMGIDERSLAGETNPVADHVATIGREKMRLLSGAPSATTAXXXXXXXXXXXXXXXXDTIAEVSSDDGXXXXXXXXXXXXXXXDKQTPVPPVEKPAAAGDPDDEASGGIELMDDPDIRNAVEDFDSRNWTMDQLEVSCQTLLEECYASEDRRRRLLSAGMLRKLVELYPSALRYTLPKQLAHYRKLPSAISTHKRMTLLMQGSELRARWRNVNADQSNGCLPPSLLHAYLSIILSLIDMETCPQYFRMNRVKVVGGSGLLALAVHFKSGDRSQRLACRILRELAREPLVIYELLKAGVAEYMSRLLPKLRMTSTDRLLEALDALDSMAFSAMRLCVLSCANPDRGQGNSALVAALVAEGSSIGGLESEIRVPTSDKLASTACYHSVLQELLAYAGRALELLVQGLQSQEEVVPEMALALFLQLCSRQEGREGIEASEGGAMLLPLVSGGQAQESPIFLRGLTCAIALARRGPHGPSPGSTTAAGGSLPPTAPAGLXXXXXGGVGLSGPPKPHPLDLEGKLYNDLVDVLDAPPPVPLEGVRGLVRMGFLEAVMRFLVREDDEGDGPDTADGKLSLSGGAKGGYSLEGRSGRRKRGRGGGINKQPQFRARGPYYFSLKQRHACLGAVALHGLVVLVGPHPAIFSGQTLRYLCYSIQVAYIDLTVGRLAPGMGYPLLFRSIQLACRALAFLAASDDSQXXXXXXXXXXXXXXXXXXXXXXXXQQVEEAP-KGGMVAEYGSLRRVVDSLFSTTAMKEVACMAQMPSRAAWDGDDGYMFRQLERTVSSAAILIAGVCPVPAGERDPFVRFDKPEDEQLSLKLWQALMERLVNAVGGPLCSTLLVADSLEIIAHTCRALSKLSAANSTAQMLLDSHGAMKAIIRLGPKVPANLPAV---EPEEQNAGTNISSSSSLHPGRTVDSYGDAMATGKQQPRTAARRTGDTAGVSGYREGRQQTRTGEGMQGVERRSREKENR--------GDLSCPSPCSGYDIREGEMADASTRKLCSLPFYYFRFVSNVARVPSGRAVVQSSGTLKRCLERLALDVSGSVAARLATLRCRSEICVLVARMAGTYDRDTGTANDFILSPRYRAVRVMLGVLATCPEDGARLGGSRALVEIARYNAACALAELCRDVLKAVPLMADAGGIHLACKIANDPRSPMPLLKQVLRILQAAGSFPDRVYASSLADPALLRSLHRIANNAYPGFRPPP-AGRET-PLSSVFPRKNAQTLARKQAAAATGGGGLANVRTEVPPPSAFGLLKPRSAEAQLISDLAREVAYLIGVTARPL--TKADRSPTNREENIQAGKEKTLLLVAPP----SKHAREVEPGKNTDPEGAEDSEKSVDATVLAKKQVPVGDGEEMEVPVVKVTVPTLLASREGTGDDTVLERPGTYLGCGVTTCSGLGVTGEHGDIIAGNVPHPDFVLRKIDDGHDARRDNSYINCDNKLEQETTTESLGSNSTEL----ANRGG-ALVSTGRRDKDYEKHVVGSIFLLNPRDVIVATPLALLSAREASFRAELIRRKEHYKLGGTGKEGKFNSEESEKLHLEGSEQLKAPAPLAQEDRQTCPLQAAKQESLTTPPRRALLGKSKHSPGHVDVSRSPLMASTRPTGAQPPVQPWRPLDEGSGNLRPRTAGMHPAFPNRVDERDRRKVDALDGTGSFLS---PLRPGKGEEFVSFARPAAHWSVTAGVGARGRGVSPDRVQGKGQSEGLRITNANAASGRGGGGRGGDVVGRFVCRGYLLDPTFADSNPIILHPRLPRISGG--RGFSQVVPESSTLADHIASQVAMRATDGTKGGIEPYRNVVDVLWHHVDVSGGRPAGAHRYFSEQGRPLSPVNFQ 5577
G PPEPWE+A+GDT ERVGRQGR V++YAAKM AMGI+E+SLAG+ NP+ADHVAT+G++KMRLLS P + VS G + + +G+ +D + G++L+DDPDIRNAVEDFDSRNWTMDQLEVSCQTLLEECYASEDRRRRLLSAGMLRKLVE+YPSALRYT P+ +A YR+LP AI+THKRMTLLMQG+ELR RWR +NAD+ +G LPPSLLHAYL IIL+LID +TCP++ RMNRVKVVGG GLLAL+VHFK+GDRSQRLACRILRELAREPL+IYELL AGVAEY+SRLLPKLR TS DRLLEALDA+DSMAFSAMR C L ANP RGQGNSAL+AALVA+GSSIGGLESEIR+P +KLA+T CYHSVLQE+LAYAGRALELLVQG+QSQEE+ P+M+LALFLQLCSRQEGR+GIEA++G AML PL+SG QAQ SP+FLRGL CA+A+AR+G G +PGST G + TAP GL GGVG SGPPKPHPLD EGKLY+DLV +LDAPPP PL VRGLVRMG LEAVMRFLVREDD + D +SLSGG G +GR +R +P R+ GP+YF LKQRHACLGAVALHGL VL GPHPAI +G TLRYLCYSIQ+AYIDLTVG LAPG+ YPL+FRSIQLACRALAFLA S + Q E+A ++ ++G LRRV DSL STTA+ EVAC+AQMPSRAAW GD+G+M+R LERTVSSAAIL+AGVCPVPAGERDPF RFD+PEDE LSL+L Q LMERLV VGG LCSTL+VA+SLEIIAH CRAL+KLS AN+T QMLLD+H MKA+IRLGP+ PA LP E EE G + S S S R+ G + + P++ G+ A + E R+ + EG + RR ++ R G + PCSGY +REGEMADASTRKLCSLPF YFR V+N+ARVPSGRAVVQSSGTLKRCLERLALDVSG AARLATLRCRSEICVL+ RMAGTYDR TG AN+FIL PRY+ + V+LG+LAT E G +R +E+AR+NAA AL +C D +++VP++ADAGGIHLAC +AND SPMPLLKQVLRIL AGSFPD VYAS +A+P +LRSL+RIANNAYPGFRP +GR++ P SS RK AQT A G GG + R +P S LKPRSAE++LISDLA EVAYL+G A + SP EE+ AG+ + +AP + AR K + EG S + A V + G G + T +L S D V +PGTY GCGVT+C GLG TGEHGDI AGN PH FV+R D G +Y +++T LGS++ ++RG A G E V+ ATPLALLSAREASFR ELI RKEHY LGGT K+G +E L+ ++ P + + ++ ++A+++ + R L G+S P VD+ +SPL+ASTRPTG PP RP E ++ D R VD + + LS PG G+EFV+FARPAAHWSVT + A SP R + S+G+RI N+ A G G VVGRF RGYLLDPTF D NP+ILHPRLP I GG RGFSQV P+ STLA+ + S A GT EPYRN V+VL H V VSG R AG F E+G PLSP Q
Sbjct: 33 GGPPEPWETALGDTGERVGRQGRTVVEYAAKMNAMGINEKSLAGQNNPIADHVATMGQDKMRLLSSNPVVHAPTMGDLGGAPTSDAVAEEEEDAVSVSSGWSEDSDESTAAPSQAQRDSATAAAASGRDSGESEDVSCDGLDLIDDPDIRNAVEDFDSRNWTMDQLEVSCQTLLEECYASEDRRRRLLSAGMLRKLVEIYPSALRYTFPRWIAQYRELPGAIATHKRMTLLMQGAELRTRWRRINADEKHGSLPPSLLHAYLCIILALIDTDTCPRFCRMNRVKVVGGGGLLALSVHFKAGDRSQRLACRILRELAREPLLIYELLNAGVAEYLSRLLPKLRETSIDRLLEALDAVDSMAFSAMRFCKLRSANPSRGQGNSALIAALVADGSSIGGLESEIRLPDGNKLATTVCYHSVLQEMLAYAGRALELLVQGVQSQEEIAPDMSLALFLQLCSRQEGRDGIEATDGMAMLRPLISGAQAQNSPVFLRGLACAVAIARQGAPGSAPGST-GEGATPSATAPPGLSLPKAGGVGRSGPPKPHPLDFEGKLYDDLVGILDAPPPAPLNAVRGLVRMGSLEAVMRFLVREDDGEEYGTDDDESVSLSGG--------GGTGRTRR--------KPDGRSSGPHYFRLKQRHACLGAVALHGLAVLAGPHPAIMTGPTLRYLCYSIQIAYIDLTVGTLAPGVDYPLMFRSIQLACRALAFLATSGATGAPPLGDGQRENVTVDVGRG------QAEDAQDSSSVIVDHGPLRRVADSLLSTTAINEVACLAQMPSRAAWAGDEGHMYRHLERTVSSAAILVAGVCPVPAGERDPFTRFDEPEDESLSLQLCQPLMERLVTTVGGSLCSTLMVAESLEIIAHACRALAKLSDANTTVQMLLDTHDVMKAVIRLGPRAPAVLPVAAHSEREEARRGGSFSPSRSA---RSNHGEGRLLPASPEPPKSTINPGGEQAQTTAT-ETRESSVASEGGENKPRRRGDRVGRKGFGGCSDGHSAPQPPCSGYGVREGEMADASTRKLCSLPFDYFRLVANIARVPSGRAVVQSSGTLKRCLERLALDVSGCPAARLATLRCRSEICVLIGRMAGTYDRKTGAANEFILHPRYQTLTVLLGMLATPAEHRRLFGATRVHIELARHNAAYALGAICTDTVRSVPMVADAGGIHLACSVANDVNSPMPLLKQVLRILHGAGSFPDGVYASLIAEPPVLRSLNRIANNAYPGFRPETTSGRDSRPTSSASARKGAQT-APAMKPRGDGAGGKVDARERMPVNSMPSFLKPRSAESRLISDLATEVAYLVGARANKCGSPRIPASPPGPEESAMAGQHQKARFLAPKDTAEATEARLETGQKRVEAEGNHLSLTNPAAAVES------GGGHAR----IGKTSHSLSTSTTP-ADKAVSGKPGTYSGCGVTSCKGLGFTGEHGDI-AGNTPHAAFVVRNDDRGKRGGESEAY----GTAKKQTPVVHLGSDNAGAQVHNSSRGSIAEAEPGAESIAEEXXXXXXXXXXXXPGVVTATPLALLSAREASFRDELIHRKEHYSLGGTRKKGVGQGKEEGGGSLQALATVERPGGMPEAGKRGRSIEASRRSQSSN---RKLRGRS---PAPVDIVQSPLIASTRPTGF-PPGSECRPGPER----------------DKADRGCRHGVDRQEPVKTALSFGTKCAPG-GKEFVTFARPAAHWSVTNSLSA-----SPGRTR----SKGVRIPNSTEAGGVG-------VVGRFASRGYLLDPTFQDHNPVILHPRLPLIGGGAGRGFSQV-PDGSTLAELVTSPAAKGGAKGT----EPYRNSVEVLRHRVGVSGERKAGKQSCFDEKGLPLSPGKLQ 1826 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig673.16267.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig673.16267.1 >prot_M-pyrifera_M_contig673.16267.1 ID=prot_M-pyrifera_M_contig673.16267.1|Name=mRNA_M-pyrifera_M_contig673.16267.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=1859bp MFWPVQGAPPEPWESAIGDTSERVGRQGRAVIDYAAKMQAMGIDERSLAGback to top mRNA from alignment at M-pyrifera_M_contig673:16565..34200- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig673.16267.1 ID=mRNA_M-pyrifera_M_contig673.16267.1|Name=mRNA_M-pyrifera_M_contig673.16267.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=17636bp|location=Sequence derived from alignment at M-pyrifera_M_contig673:16565..34200- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig673:16565..34200- >mRNA_M-pyrifera_M_contig673.16267.1 ID=mRNA_M-pyrifera_M_contig673.16267.1|Name=mRNA_M-pyrifera_M_contig673.16267.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=11154bp|location=Sequence derived from alignment at M-pyrifera_M_contig673:16565..34200- (Macrocystis pyrifera P11B4 male)back to top |