mRNA_M-pyrifera_M_contig67255.16258.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig67255.16258.1 vs. uniprot
Match: A0A2S6I6K5_9BACT (Putative secreted protein (Por secretion system target) n=2 Tax=Lewinella xylanilytica TaxID=1514080 RepID=A0A2S6I6K5_9BACT) HSP 1 Score: 65.9 bits (159), Expect = 1.730e-10 Identity = 30/89 (33.71%), Postives = 50/89 (56.18%), Query Frame = 1
Query: 22 SVDFSQTHVYMVNDYVDTTRTYDTAKAI-AYAKPSFIGEMGFSDPGTSNYDDPTAIYLLNALVAPLFALGAQSGNTWWWDNWIDPHDLF 285
++D +QTH Y+ + ++ + + +AKP+ +GE G DP +Y+ N+L A LF GA + +WWWDN+IDP +L+
Sbjct: 356 NIDLTQTHFYVNSGNIERALVGGVRRYLDTFAKPTLVGEFGLGSDRDLVRTDPDGVYVHNSLWAGLFGGGAGTAMSWWWDNYIDPQNLY 444
BLAST of mRNA_M-pyrifera_M_contig67255.16258.1 vs. uniprot
Match: A0A7V2UCW3_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7V2UCW3_9BACT) HSP 1 Score: 63.9 bits (154), Expect = 8.050e-10 Identity = 36/99 (36.36%), Postives = 52/99 (52.53%), Query Frame = 1
Query: 22 SVDFSQTHVYMVNDYVDTTRTYDTAKAIA--------YAKPSFIGEMGFSDPGTSNYD---DPTAIYLLNALVAPLFALGAQSGNTWWWDNWIDPHDLF 285
++DF Q H Y+ D+ T + YD A + + KP I E GF G+ N D TAI+L NAL A + A + WWWDN+++P+DL+
Sbjct: 337 ALDFVQLHSYIQPDWEPTPKQYDAAALVLDQAEDFYQFRKPFLIAEYGFHPSGSENRLNRLDRTAIHLHNALWASCLSGAAGAPMLWWWDNYVEPNDLY 435
BLAST of mRNA_M-pyrifera_M_contig67255.16258.1 vs. uniprot
Match: A0A7V4YUX2_9BACT (DUF5060 domain-containing protein n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A7V4YUX2_9BACT) HSP 1 Score: 59.7 bits (143), Expect = 2.550e-8 Identity = 32/98 (32.65%), Postives = 50/98 (51.02%), Query Frame = 1
Query: 1 PLIDGTDSVDFSQTHVYMVNDYVDTTRTYDTAKAIA-YAKPSFIGEMGFSDPGTSNYD--DPTAIYLLNALVAPLFALGAQSGNTWWWDNWIDPHDLF 285
P + +DF+QTH Y+ V+ +A + KP+ GE G PG DP I++ N++ LF G +G +WWWDN+I+P +L+
Sbjct: 365 PALWNQPDIDFTQTHFYVNTPNVERVLANGVRDYLADFEKPTLTGEFGLG-PGGGELSTLDPDGIHIHNSVWGSLFGGGMGAGMSWWWDNYIEPKNLY 461
BLAST of mRNA_M-pyrifera_M_contig67255.16258.1 vs. uniprot
Match: A0A7C3EQZ6_9BACT (DUF5060 domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C3EQZ6_9BACT) HSP 1 Score: 59.3 bits (142), Expect = 3.430e-8 Identity = 34/98 (34.69%), Postives = 47/98 (47.96%), Query Frame = 1
Query: 25 VDFSQTHVYMVNDYVDTTRTYDTAKAIA--------YAKPSFIGEMGFSDPGTSNYD---DPTAIYLLNALVAPLFALGAQSGNTWWWDNWIDPHDLF 285
+DF Q H Y+ + T + YD A + + KP I E GF G N D T I+L NAL A A + WWWDN+++P+DL+
Sbjct: 427 LDFVQLHSYIHEGWEPTPKQYDAAALVLDQAQDFEQFRKPYLIAEFGFHPTGADNRLNALDRTGIHLHNALWASCLGGAAGAPMLWWWDNYVEPNDLY 524
BLAST of mRNA_M-pyrifera_M_contig67255.16258.1 vs. uniprot
Match: A0A7X7LQQ0_9MOLU (DUF5060 domain-containing protein n=1 Tax=Acholeplasmataceae bacterium TaxID=1898209 RepID=A0A7X7LQQ0_9MOLU) HSP 1 Score: 57.4 bits (137), Expect = 1.620e-7 Identity = 38/95 (40.00%), Postives = 45/95 (47.37%), Query Frame = 1
Query: 22 SVDFSQTHVYMVNDYVDTTRTYDTAKAI-----AYAKPSFIGEMGFS-DPGTSNY-DDPTAIYLLNALVAPLFALGAQSGNTWWWDNWIDPHDLF 285
S+DF H Y +Y DT A I Y KP F GE+G G + Y DPT I L L A + GA WWWD+WID HDL+
Sbjct: 370 SIDFGAVHSY---EYYDTNFIQKLATEIDTLSAKYDKPIFFGEIGIDWQNGANTYAKDPTGITLHQGLWAGIMT-GAGGAMQWWWDSWIDLHDLW 460
BLAST of mRNA_M-pyrifera_M_contig67255.16258.1 vs. uniprot
Match: A0A3N9MW96_9BACT (Uncharacterized protein n=1 Tax=Calditrichaeota bacterium TaxID=2212469 RepID=A0A3N9MW96_9BACT) HSP 1 Score: 57.4 bits (137), Expect = 1.650e-7 Identity = 34/90 (37.78%), Postives = 43/90 (47.78%), Query Frame = 1
Query: 22 SVDFSQTHVYMVNDYVDTTRTYDTAKAIAYAKPSFIGEMG--FSDPGTSNYDDPTAIYLLNALVAPLFALGAQSGNTWWWDNWIDPHDLF 285
++DFSQTH Y D R + + KP +GE G + P + DDP I N L A FA TWWW+N IDP DL+
Sbjct: 369 NLDFSQTHTYDAPDIPTVIRQMIGMNSPVFNKPHVVGEYGINYRGPKETLQDDPEHIGFHNGLWAGFFAETPVIPLTWWWNNVIDPCDLY 458
BLAST of mRNA_M-pyrifera_M_contig67255.16258.1 vs. uniprot
Match: A0A3N5LZG3_9CHLR (DUF5060 domain-containing protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3N5LZG3_9CHLR) HSP 1 Score: 53.5 bits (127), Expect = 3.670e-6 Identity = 32/86 (37.21%), Postives = 45/86 (52.33%), Query Frame = 1
Query: 31 FSQTHVYMVNDYVDTT-RTYDTAKAIAYAKPSFIGEMGFSDPGTSNYDDPTAIYLLNALVAPLFALGAQSGNTWWWDNWIDPHDLF 285
FSQ H Y D V+T +Y + KP +GE+G+S G + + I L N L A F+ A + WWWDN+IDP +L+
Sbjct: 388 FSQIHDYTARDPVETFGSSYRQTREAGPGKPVVMGELGYSWVGENYPFNVDGIQLHNGLWAAPFSGYAGTAMYWWWDNYIDPLNLW 473
BLAST of mRNA_M-pyrifera_M_contig67255.16258.1 vs. uniprot
Match: A0A3S0D2X0_9SPHI (DUF5060 domain-containing protein n=6 Tax=Bacteroidetes TaxID=976 RepID=A0A3S0D2X0_9SPHI) HSP 1 Score: 52.8 bits (125), Expect = 7.040e-6 Identity = 27/90 (30.00%), Postives = 48/90 (53.33%), Query Frame = 1
Query: 22 SVDFSQTHVYMVNDYVDTTRTYDTAKAIA-YAKPSFIGEMGFSDPGTS-NYDDPTAIYLLNALVAPLFALGAQSGNTWWWDNWIDPHDLF 285
++DF+QTH Y+ +++ + I + KP+ GE G + + + DP +Y+ N L A + + +WWWDN+IDP +L+
Sbjct: 366 NIDFTQTHYYVGAPNLESILAAGSRSYIQQFKKPTLNGEFGINSGNVALSSIDPNGMYIHNTLWATALSGAMGTAMSWWWDNYIDPKNLY 455 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig67255.16258.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig67255.16258.1 >prot_M-pyrifera_M_contig67255.16258.1 ID=prot_M-pyrifera_M_contig67255.16258.1|Name=mRNA_M-pyrifera_M_contig67255.16258.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=95bp PLIDGTDSVDFSQTHVYMVNDYVDTTRTYDTAKAIAYAKPSFIGEMGFSDback to top mRNA from alignment at M-pyrifera_M_contig67255:720..1264- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig67255.16258.1 ID=mRNA_M-pyrifera_M_contig67255.16258.1|Name=mRNA_M-pyrifera_M_contig67255.16258.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=545bp|location=Sequence derived from alignment at M-pyrifera_M_contig67255:720..1264- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig67255:720..1264- >mRNA_M-pyrifera_M_contig67255.16258.1 ID=mRNA_M-pyrifera_M_contig67255.16258.1|Name=mRNA_M-pyrifera_M_contig67255.16258.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=570bp|location=Sequence derived from alignment at M-pyrifera_M_contig67255:720..1264- (Macrocystis pyrifera P11B4 male)back to top |