mRNA_M-pyrifera_M_contig67093.16235.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig67093.16235.1 vs. uniprot
Match: A0A2I6U1M4_SACJA (Tic20-like protein n=15 Tax=Saccharina japonica TaxID=88149 RepID=A0A2I6U1M4_SACJA) HSP 1 Score: 329 bits (843), Expect = 1.100e-108 Identity = 179/265 (67.55%), Postives = 203/265 (76.60%), Query Frame = 1
Query: 1 KLSSSQIEARIAQLPGGCLFPDDLARKLISTYDENGDGILQKSEFVPSDELRTRVENMFREQRDEERLARMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAP-TAADKALSALPYVLPLADSLAYAGHIFAAFPEQMAWAQPLAGALLALRSLPFATLVTFFGLSILSSLPQVNKLVRFNMQQAINLDIALILPGVLGALTSASLGQDAYKLVPFSQAGSDVVFVAMLVAVAYSVGASAGGVFPNKLPLLGRMNRENPDREQED 792
K +I+ARIA LPGG LFPDDLARKLI TYD+NGDG+LQ+SEF P++ELRTR+ENMFR+Q++ R AR+ P TAADKALSALPY+LPL D +++AGH+F AFPEQ AWAQPLA LLALRSLPFATLV FF LS LS PQVNKLVRFNMQQAINLDIALI+PGVLGAL S SLGQDAYKLVP ++AGSDVVFVAML AVAYSV S+ G FPNKLPLLGR+NRENPDRE+E+
Sbjct: 148 KPDREEIDARIAALPGGSLFPDDLARKLIDTYDQNGDGLLQRSEFAPTEELRTRLENMFRDQQETARQARVEERQRQMEDKLAAEVGTGAGAVVPAGGVNDGPATAADKALSALPYLLPLVDGISFAGHLFGAFPEQTAWAQPLAAVLLALRSLPFATLVGFFSLSALSGNPQVNKLVRFNMQQAINLDIALIVPGVLGALASVSLGQDAYKLVPLAEAGSDVVFVAMLAAVAYSVVTSSTGSFPNKLPLLGRLNRENPDREEEE 412
BLAST of mRNA_M-pyrifera_M_contig67093.16235.1 vs. uniprot
Match: D8LS19_ECTSI (EF-hand domain-containing protein n=7 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS19_ECTSI) HSP 1 Score: 312 bits (799), Expect = 4.990e-102 Identity = 176/262 (67.18%), Postives = 202/262 (77.10%), Query Frame = 1
Query: 1 KLSSSQIEARIAQLPGGCLFPDDLARKLISTYDENGDGILQKSEFVPSDELRTRVENMFREQRDEERLARMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPTAADKALSALPYVLPLADSLAYAGHIFAAFPEQMAWAQPLAGALLALRSLPFATLVTFFGLSILSSLPQVNKLVRFNMQQAINLDIALILPGVLGALTSASLGQDAYKLVPFSQAGSDVVFVAMLVAVAYSVGASAGGVFPNKLPLLGRMNRENPDREQ 786
K S +++ RIA LPGG LFPDDLA KLI TYD+NGDG+LQ+SEF P++ELRTR+EN+F +QR+EER+ARM XXXXXXX T ADKALSALPYVLPLAD + +A H+F AFPEQ AWAQPLA LLALRS+PFATL+ FF LSI SS PQ+NKLVRFNMQQAINLDIALILPGV+GA+T A LG DA KL P + A SDVVFVA+L AVAYSVG SA G FPNKLPLLGR+NRENPD ++
Sbjct: 150 KPSKEEVDDRIAGLPGGTLFPDDLALKLIQTYDQNGDGLLQQSEFAPTEELRTRLENLFSQQREEERVARMEXXXXXXXDRMRPDAGTVVVSPGDVNDGPA--TTADKALSALPYVLPLADGVVFAAHLFGAFPEQTAWAQPLAAVLLALRSVPFATLIGFFSLSIWSSNPQINKLVRFNMQQAINLDIALILPGVVGAITGAVLGSDASKLAPLANASSDVVFVALLAAVAYSVGTSATGSFPNKLPLLGRLNRENPDNQE 409
BLAST of mRNA_M-pyrifera_M_contig67093.16235.1 vs. uniprot
Match: A0A6H5KUU9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUU9_9PHAE) HSP 1 Score: 278 bits (712), Expect = 9.230e-91 Identity = 159/235 (67.66%), Postives = 184/235 (78.30%), Query Frame = 1
Query: 82 LISTYDENGDGILQKSEFVPSDELRTRVENMFREQRDEERLARMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPTAADKALSALPYVLPLADSLAYAGHIFAAFPEQMAWAQPLAGALLALRSLPFATLVTFFGLSILSSLPQVNKLVRFNMQQAINLDIALILPGVLGALTSASLGQDAYKLVPFSQAGSDVVFVAMLVAVAYSVGASAGGVFPNKLPLLGRMNRENPDREQ 786
L+ +YD+NGDG+LQ+SEF P++ELRTR+EN+F +QR+EER+ARM XXXXXXXX T ADKALSALPYVLPLAD + +A H+F AFPEQ AWAQPLA LLALRS+PFATLV FF LS+ SS PQ+NKLVRFNMQQAINLDIALILPGV+GA+T A LG DA KL P + AGSDVVFVA+L AVAYSVG SA G FPNKLPLLGR+NRENPD ++
Sbjct: 40 LVRSYDQNGDGLLQQSEFAPTEELRTRLENLFSQQREEERVARMEXXXXXXXXKMRPDAGAVEVSPGDVNDGPA--TTADKALSALPYVLPLADGVVFAAHLFGAFPEQTAWAQPLAAVLLALRSVPFATLVGFFSLSVGSSNPQINKLVRFNMQQAINLDIALILPGVVGAITGAVLGSDASKLAPLANAGSDVVFVALLAAVAYSVGTSATGSFPNKLPLLGRLNRENPDNQE 272
BLAST of mRNA_M-pyrifera_M_contig67093.16235.1 vs. uniprot
Match: D7FRG5_ECTSI (EF-hand domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRG5_ECTSI) HSP 1 Score: 269 bits (688), Expect = 1.870e-85 Identity = 150/241 (62.24%), Postives = 174/241 (72.20%), Query Frame = 1
Query: 1 KLSSSQIEARIAQLPGGCLFPDDLARKLISTYDENGDGILQKSEFVPSDELRTRVENMFREQRDEERLARMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPTAADKALSALPYVLPLADSLAYAGHIFAAFPEQMAWAQPLAGALLALRSLPFATLVTFFGLSILSSLPQVNKLVRFNMQQAINLDIALILPGVLGALTSASLGQDAYKLVPFSQAGSDVVFVAMLVAVAYSVGASAGG 723
K S +++ RIA LPGG LFPD+LA KLI TYD+NGDG+LQ+SEF P++ELRTR+EN+ +QR++ERLAR+ T ADKALSALPY+LPL D + +A H+F AFPEQ AWAQPLA LLALRSLPFATL+ FF LSI SS P+VNKLVRFNMQQAINLDIALILPGV+GA+T LG DA KL P S AGSDVVFVA+L AVAYSVG SA G
Sbjct: 150 KPSKEEVDERIAGLPGGTLFPDELALKLIQTYDQNGDGLLQQSEFAPTEELRTRLENLLSQQREDERLARLEERQRQMDDKMRPDTGAVVVSPGDVNDGPA--TTADKALSALPYLLPLVDGILFAAHLFGAFPEQTAWAQPLAAVLLALRSLPFATLIGFFSLSIGSSNPRVNKLVRFNMQQAINLDIALILPGVVGAITGGMLGADAVKLAPLSNAGSDVVFVALLAAVAYSVGTSATG 388
BLAST of mRNA_M-pyrifera_M_contig67093.16235.1 vs. uniprot
Match: A0A6H5JY95_9PHAE (EF-hand domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JY95_9PHAE) HSP 1 Score: 248 bits (633), Expect = 4.120e-77 Identity = 130/259 (50.19%), Postives = 177/259 (68.34%), Query Frame = 1
Query: 1 KLSSSQIEARIAQLPGGCLFPDDLARKLISTYDENGDGILQKSEFVPSDELRTRVENMFREQRDEERLARMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPTAADKALSALPYVLPLADSLAYAGHIFAAFPEQMAWAQPLAGALLALRSLPFATLVTFFGLSILSSLPQVNKLVRFNMQQAINLDIALILPGVLGALTSASLGQDAYKLVPFSQAGSDVVFVAMLVAVAYSVGASAGGVFPNKLPLLGRMNRENPD 777
K + ++EA+I +LPG LFPDDLA +LI YD+NGDG+LQ+SEF P++ELR R+E++FRE+R+EE AR A T+ +KAL ALPY+LPL+D + YA HI++ FP+QMAW++PL L+A+ +LPFATLV FFG+SILSS +NKL+RFNM QAIN DIALI+P V G L + SLG DAYK+ P + +D++ V++++AVAYS+ ASA G PNK+P G++NR D
Sbjct: 145 KPTPEEVEAKILELPGRALFPDDLAERLIKLYDQNGDGVLQQSEFAPTEELRARLESIFRERREEELEARQAERKREMDAKTTGKGKMLSSVADSDREAASA-TSLEKALCALPYILPLSDGIVYAQHIYSTFPQQMAWSEPLVAILIAVNNLPFATLVAFFGMSILSSNQNINKLLRFNMLQAINFDIALIVPSVFGPLLTWSLGSDAYKISPVTDIATDILSVSLVLAVAYSIAASATGAIPNKIPFFGKINRVTRD 402
BLAST of mRNA_M-pyrifera_M_contig67093.16235.1 vs. uniprot
Match: A0A6H5JBJ0_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBJ0_9PHAE) HSP 1 Score: 235 bits (599), Expect = 3.110e-73 Identity = 142/265 (53.58%), Postives = 170/265 (64.15%), Query Frame = 1
Query: 1 KLSSSQIEARIAQLPGGCLFPDDLARKLISTYDENGDGILQKSEFVPSDELRTRVENMFREQRDEERLARMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPTAADKALSALPYVLPLADSLAYAGHIFAAFPEQMAWAQPLAGALLALRSLPFATLVTFFGLSI--LSSLPQVNKLVRFNMQQAINLDIALILPGVLGALTSASLGQDAYKLVPFSQAGSDVVFVAMLVAVAYSVGASAGGVFPNKLPLLGRMNRENPDREQE 789
K S +++ RIA LPGG LFPD+LA KLI TYD+NGDG+LQ SEF P++ELRTR+E++F +QR++ER+ARM DK V+ AWAQPLA LLALRS+PFATL+ FF LS+ L + PQVNKLVRFN QQAIN+DIALILPGV+GA+ A LG DA KL P + AGSDVVFVA+L AVAYSVG SA G FPNKLPLLGR+NRENP+ +QE
Sbjct: 86 KPSKEEVDERIAGLPGGTLFPDELALKLIQTYDQNGDGLLQLSEFAPTEELRTRLEDLFSQQREDERVARMEERQRRMD---------------------------DKMRPDTGAVV-------------------TAWAQPLAAVLLALRSVPFATLIGFFSLSVHRLRN-PQVNKLVRFNTQQAINVDIALILPGVVGAIAGAVLGADAVKLAPLANAGSDVVFVALLAAVAYSVGTSATGSFPNKLPLLGRLNRENPENQQE 303
BLAST of mRNA_M-pyrifera_M_contig67093.16235.1 vs. uniprot
Match: A0A6H5KVD7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVD7_9PHAE) HSP 1 Score: 230 bits (587), Expect = 5.500e-73 Identity = 119/159 (74.84%), Postives = 134/159 (84.28%), Query Frame = 1
Query: 310 TAADKALSALPYVLPLADSLAYAGHIFAAFPEQMAWAQPLAGALLALRSLPFATLVTFFGLSILSSLPQVNKLVRFNMQQAINLDIALILPGVLGALTSASLGQDAYKLVPFSQAGSDVVFVAMLVAVAYSVGASAGGVFPNKLPLLGRMNRENPDREQ 786
T ADKALSALPYVLPLAD + +A H+F AFPEQ AWA+PL LLALRS+PFATL+ FF LS+ SS PQ+NKLVRFNMQQAINLDIALILPGV+GA+T A LG DA KL P + AGSDVVFVA+L AVAYSVG SA G FPNKLPLLGR+NRENPD ++
Sbjct: 32 TTADKALSALPYVLPLADGVVFAAHLFGAFPEQTAWAEPLVAVLLALRSVPFATLIGFFSLSVGSSNPQINKLVRFNMQQAINLDIALILPGVVGAITGAVLGSDASKLAPLANAGSDVVFVALLAAVAYSVGTSATGSFPNKLPLLGRLNRENPDNQE 190
BLAST of mRNA_M-pyrifera_M_contig67093.16235.1 vs. uniprot
Match: A0A6H5KCI4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCI4_9PHAE) HSP 1 Score: 224 bits (572), Expect = 4.590e-70 Identity = 131/256 (51.17%), Postives = 154/256 (60.16%), Query Frame = 1
Query: 22 EARIAQLPGGCLFPDDLARKLISTYDENGDGILQKSEFVPSDELRTRVENMFREQRDEERLARMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPTAADKALSALPYVLPLADSLAYAGHIFAAFPEQMAWAQPLAGALLALRSLPFATLVTFFGLSILSSLPQVNKLVRFNMQQAINLDIALILPGVLGALTSASLGQDAYKLVPFSQAGSDVVFVAMLVAVAYSVGASAGGVFPNKLPLLGRMNRENPDREQE 789
+ RIA LPGG LFPD+LA KLI TYD NG+G+LQ+SEF P++ELRTR+EN+F +QR+E+RLARM AD ALSALPY+LPLAD + +A H+F FPEQ AWAQPLA AIN+DIALILPGV+GA+ A LG DA KL P + AGSDVVFVA+L AVAYSVG SA G FP+KLPLLGR+NRENP EQE
Sbjct: 21 DERIAGLPGGTLFPDELALKLIQTYDHNGNGLLQQSEFAPTEELRTRLENLFSQQREEKRLARMEERQRQMDDNMRPDAGAVVVSPGDVNDGLV--NTADNALSALPYLLPLADGIVFAAHLFGVFPEQTAWAQPLAA--------------------------------------AINVDIALILPGVVGAIAGAVLGADAVKLAPLANAGSDVVFVALLAAVAYSVGTSATGSFPSKLPLLGRLNRENPGNEQE 236
BLAST of mRNA_M-pyrifera_M_contig67093.16235.1 vs. uniprot
Match: D8LS20_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS20_ECTSI) HSP 1 Score: 220 bits (560), Expect = 3.300e-66 Identity = 130/198 (65.66%), Postives = 150/198 (75.76%), Query Frame = 1
Query: 1 KLSSSQIEARIAQLPGGCLFPDDLARKLISTYDENGDGILQKSEFVPSDELRTRVENMFREQRDEERLARMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPTAADKALSALPYVLPLADSLAYAGHIFAAFPEQMAWAQPLAGALLALRSLPFATLVTFFGLSILSSLPQVNKLVRFNMQQAINLDIALILPGVLG 594
K S +++ RIA LPGG LFPDDLA KLI TYD+NGDG+LQ+SEF P++ELRTR+EN+F +QR+EER+ARM XXXXXXX T ADKALSALPYVLPLAD + +A H+F AF EQ AWAQPLA LLALRS+PFATL+ FF LSI SS PQ+NKLVRFNMQQAINLDIALILPGV+G
Sbjct: 150 KPSKEEVDDRIAGLPGGTLFPDDLALKLIQTYDQNGDGLLQQSEFAPTEELRTRLENLFSQQREEERVARMEXXXXXXXDRMRPDAGTVVVSPGDVNDGPA--TTADKALSALPYVLPLADGVVFAAHLFGAFLEQTAWAQPLAAVLLALRSVPFATLIGFFSLSIGSSNPQINKLVRFNMQQAINLDIALILPGVVG 345
BLAST of mRNA_M-pyrifera_M_contig67093.16235.1 vs. uniprot
Match: D8LTM8_ECTSI (TIC 20 related, plastid import n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTM8_ECTSI) HSP 1 Score: 204 bits (520), Expect = 7.900e-60 Identity = 110/267 (41.20%), Postives = 162/267 (60.67%), Query Frame = 1
Query: 1 KLSSSQIEARIAQLPGGCLFPDDLARKLISTYDENGDGILQKSEFVPSDELRTRVENMFREQRDEERL---ARMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPTAADKALSALPYVLPLADSLAYAGHIFAAFPEQMAWAQPLAGALLALRSLPFATLVTFFGLSILSSLPQVNKLVRFNMQQAINLDIALILPGVLGALTSASLGQDAYKLVPFSQAGSDVVFVAMLVAVAYSVGASAGGVFPNKLPLLGRMNRENPDREQED 792
K S ++++ RI+++PGG L P +LA+KLI +YD NGDG+LQ SEF ++R R++++F ++ E RL A PT DK LS LPY LPL DSL + HIF FP Q+++ +PL LL RSLPF+ L+ FFGL ++ P+VNKLVRFN++QA+ LDIA+ P + + ++ LG+D+ KL P + +DV+FV ++ V YS+ +SA GV P LP+LG+MNRE+ +++D
Sbjct: 160 KPSPAEVDERISEMPGGSLLPMELAQKLIESYDTNGDGVLQPSEFASKADMRVRLDSLFADRAQEARLEAAAAREREIENRGADKARQEAKARGLALPEDFNDGPPTITDKLLSVLPYTLPLMDSLVFGAHIFQTFPTQLSFLEPLVAILLIYRSLPFSGLILFFGLQWFAAKPEVNKLVRFNLRQAVILDIAMFFPSIFAFIITSVLGEDSAKLAPLATVCNDVIFVTVVACVLYSIASSAIGVLPESLPILGKMNRESTRAKEDD 426 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig67093.16235.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig67093.16235.1 >prot_M-pyrifera_M_contig67093.16235.1 ID=prot_M-pyrifera_M_contig67093.16235.1|Name=mRNA_M-pyrifera_M_contig67093.16235.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=265bp KLSSSQIEARIAQLPGGCLFPDDLARKLISTYDENGDGILQKSEFVPSDEback to top mRNA from alignment at M-pyrifera_M_contig67093:220..1014+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig67093.16235.1 ID=mRNA_M-pyrifera_M_contig67093.16235.1|Name=mRNA_M-pyrifera_M_contig67093.16235.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=795bp|location=Sequence derived from alignment at M-pyrifera_M_contig67093:220..1014+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig67093:220..1014+ >mRNA_M-pyrifera_M_contig67093.16235.1 ID=mRNA_M-pyrifera_M_contig67093.16235.1|Name=mRNA_M-pyrifera_M_contig67093.16235.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1590bp|location=Sequence derived from alignment at M-pyrifera_M_contig67093:220..1014+ (Macrocystis pyrifera P11B4 male)back to top |