mRNA_M-pyrifera_M_contig66812.16179.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig66812.16179.1
Unique NamemRNA_M-pyrifera_M_contig66812.16179.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig66812.16179.1 vs. uniprot
Match: A0A7C2CZY7_9BACT (Coagulation factor 5/8 type domain-containing protein n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A7C2CZY7_9BACT)

HSP 1 Score: 132 bits (331), Expect = 9.980e-31
Identity = 88/252 (34.92%), Postives = 128/252 (50.79%), Query Frame = 1
Query:    4 LFYMARKYNVPACAEFARIRSNTSPLLKSSVNILSRQLLWYTPQGSQDDLNALPLDKVYPDVAVLVSRSSWNYVEHEGEAFFGLKGGDNTWNHGHLSLGNFVFLFSGTAVAIDLGAGSYALPDYFGPKRWDYYRTNSSGHNVIQFDGK---NQDTSASASFVSTGLLGKDGAWGVLDMSKAWT---GGSMQRGGALISGRQQVVLRDEISPPSSAKKTTWSMHTPTNVTV--------LSSTAAKLEFVIAS 717
            +F++ARK+N P  A +AR  ++  PL           LLW+  QG+      LPLDK +    V+  R++WN        F G K GDN +NH HL +G FV    G   A+DLGA +Y LP YFG +RW YYR  + GHN +  +     +QD SA A  V   +   + A+ + D++ A+       + RG  L   R++VV++DE++    A    W MHTP  V +        L+   AKL+ V+ S
Sbjct:  310 MFWLARKFNRPVYAWYARSTASPHPL----------DLLWFDKQGNDPQTEGLPLDKYFRHGEVVTMRTAWN---DRNAIFVGFKAGDNKFNHSHLDIGTFVLDAMGHRWAVDLGADNYNLPGYFGRQRWTYYRLRAEGHNTLVINPSQEPDQDPSAEAKIVRF-VSQPNRAFAIADLTNAYAKHGAEKVMRGILLDRKRREVVVQDEVTLKQ-AGDVWWFMHTPAQVQLSEDGKTATLTQGTAKLQVVLLS 546          
BLAST of mRNA_M-pyrifera_M_contig66812.16179.1 vs. uniprot
Match: A0A7V3AH55_9BACT (DUF4962 domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7V3AH55_9BACT)

HSP 1 Score: 124 bits (311), Expect = 7.250e-28
Identity = 97/322 (30.12%), Postives = 152/322 (47.20%), Query Frame = 1
Query:    4 LFYMARKYNVPACAEFARIRSNTSPLLKSSVNILSRQLLWYTPQGSQDDLNALPLDKVYPDVAVLVSRSSWNYVEHEGEAFFGLKGGDNTWNHGHLSLGNFVFLFSGTAVAIDLGAGSYALPDYFGPKRWDYYRTNSSGHNVIQFDGKNQDTSASASFVSTGLLGKDGAWGVLDMSKAWTGGSMQR---GGALISGRQQVVLRDEISPPSSAKKTTWSMHTPTNVTVLSSTAAKLEFVIASDGRKITTYAWVVSSSSTCPGVKVEAFTPHLASPQKSLDGITKVQFSAPASTCTILSIAVGPME-PNSDLTVNPLNQWPKEG 957
            +F++A+ ++ PA A      ++  P  +   +     ++W   Q   +DL   P    +  + V+  RS+W   +     + G KGGDN  NH HL LG FV    G   A DLGA +Y LP+YFG KRW YYR  + GHN I  +G+NQD  A A  ++      D  + V D++ A+     QR   G AL++GRQ V + DE++    A+   W+MHT   +      A+    ++  +G K+T     +   +    V   A  P    PQ     +T++    P +T   L++ + P E P +   + PL +W   G
Sbjct:  315 MFWLAKAFHQPAYA------AHEMPFAERRADWW--HIVWAPEQSRPEDLLKAPTAAAFKRIHVVFMRSAWADPK---AVYVGFKGGDNKANHSHLDLGTFVLDALGKRWAEDLGADNYNLPEYFGRKRWTYYRLRTEGHNTITLNGENQDPKAEAPLLAF-QHAPDRTFAVADLTAAYKAQKAQRVWRGMALLNGRQVVTI-DEVALGEPAE-VAWTMHTKAKIE-----ASGARALLTLEGEKLTAE---ILEPADAKFVTASANPPE---PQAQQKDVTRLMVKLPNATQARLAVCLTPGEAPAAKPGLVPLAKWAAAG 611          
BLAST of mRNA_M-pyrifera_M_contig66812.16179.1 vs. uniprot
Match: A0A7V6DQS8_9DELT (Uncharacterized protein n=1 Tax=Desulfobacca acetoxidans TaxID=60893 RepID=A0A7V6DQS8_9DELT)

HSP 1 Score: 123 bits (308), Expect = 1.350e-27
Identity = 87/230 (37.83%), Postives = 118/230 (51.30%), Query Frame = 1
Query:    4 LFYMARKYNVPACAEFARIRSNTSPLLKSSVNILSRQLLWYTPQGSQDDLNALPLDKVYPDVAVLVSRSSWNYVEHEGEAFFGLKGGDNTWNHGHLSLGNFVFLFSGTAVAIDLGAGSYALPDYFGPKRWDYYRTNSSGHNVIQFD---GKNQDTSASAS---FVSTGLLGKDGAWGVLDMSKAWTGGSMQ--RGGALISGRQQVVLRDEISPPSSAKKTTWSMHTPTNV 669
            LF++ARKY+ P  A  A       PL           L+W     S    N+LPLD+ +  + V   RSSW   + +   F  LK GDN   H HL LG FV    G   A+DLG   Y LP YFGP+RWDYYRT + GHN +  +   G +Q+ +ASA    F S+  L    AW + D++ A+   + +  RG AL++ R+QV++ DEI     A    W +HTP  V
Sbjct:  323 LFWLARKYDQPLFALPACGSPRPHPL----------GLVWRDFAASPKPDNSLPLDRYFRGIEVAAMRSSW---QDDQGTFVALKAGDNRAGHAHLDLGTFVLDAQGQRWALDLGPDDYNLPGYFGPERWDYYRTRAEGHNTLVINPGRGPDQNPAASARISRFYSSPQL----AWAIADLTPAYAHAASKVWRGLALVN-RRQVLIEDEIETRQPAA-IWWFLHTPAMV 533          
BLAST of mRNA_M-pyrifera_M_contig66812.16179.1 vs. uniprot
Match: A0A7C3N778_9BACT (DUF4962 domain-containing protein n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A7C3N778_9BACT)

HSP 1 Score: 122 bits (307), Expect = 1.800e-27
Identity = 80/227 (35.24%), Postives = 116/227 (51.10%), Query Frame = 1
Query:    4 LFYMARKYNVPACAEFARIRSNTSPLLKSSVNILSRQLLWYTPQGSQDDLNALPLDKVYPDVAVLVSRSSWNYVEHEGEAFFGLKGGDNTWNHGHLSLGNFVFLFSGTAVAIDLGAGSYALPDYFGPKRWDYYRTNSSGHNVIQFDGK---NQDTSASASFVSTGLLGKDGAWGVLDMSKAWT--GGSMQRGGALISGRQQVVLRDEISPPSSAKKTTWSMHTPTNV 669
            +F++ARK+N P  A +AR  +   PL           LLW+  +G+      LPLDK +  V V   RS+WN        F G K GDN +NH HL +G FV    G   AIDLGA +Y LP +FG +RW YYR  + GHN +  +     +QD SA+A  +    L + G + + D++ A+      + RG  L   R+ V+++DE++     +   W MHT   V
Sbjct:  316 MFWLARKFNRPVYAWYARTTATPHPL----------DLLWFDERGNDPATEKLPLDKYFRYVEVATMRSAWN---DRNAIFVGFKAGDNKFNHSHLDIGTFVLDALGYRWAIDLGADNYNLPGFFGRQRWTYYRLRAEGHNTLVINPSQEPDQDPSAAAKIIRFVSLPEKG-FAIADLTPAYARHAEKVLRGVMLDRKREFVLVQDELTLKQPGE-IWWFMHTTAEV 527          
BLAST of mRNA_M-pyrifera_M_contig66812.16179.1 vs. uniprot
Match: A0A7C5YB45_9BACT (DUF4962 domain-containing protein n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A7C5YB45_9BACT)

HSP 1 Score: 120 bits (300), Expect = 1.510e-26
Identity = 82/232 (35.34%), Postives = 116/232 (50.00%), Query Frame = 1
Query:    4 LFYMARKYNVPACAEFARIRSNTSPLLKSSVNILSRQLLWYTPQGSQDDLNALPLDKVYPDVAVLVSRSSWNYVEHEGEAFFGLKGGDNTWNHGHLSLGNFVFLFSGTAVAIDLGAGSYALPDYFGPKRWDYYRTNSSGHNVIQFDGK---NQDTSASAS---FVSTGLLGKDGAWGVLDMSKAWTGG--SMQRGGALISGRQQVVLRDEIS--PPSSAKKTTWSMHTPTNV 669
            +F++ARK+N P  A +AR  + + PL           ++W+   G       LPLDK +  V V   R+SWN  E     F   K GDN  NH +L +G FV    G   A+DLGA +Y LP YFG  RW YYR  + GHN +  +     +QD  A+A    F S   L    A+ + D++ A++    S++RG  L+    QV+++DE+    P S     W MHTP  V
Sbjct:  310 MFWLARKFNRPIYAWYARTTTVSHPL----------DIIWFNEGGGDPIAEKLPLDKYFRKVEVATMRTSWNDRE---ATFVAFKAGDNKANHSNLDIGTFVLDALGYRWALDLGADNYNLPGYFGALRWSYYRMRAEGHNTLVINPSKEPDQDPRAAAKIIRFFSDANL----AFAIADLTPAYSAHAVSIKRGLMLLRDANQVIIQDEVELKRPGSVY---WFMHTPAQV 521          
BLAST of mRNA_M-pyrifera_M_contig66812.16179.1 vs. uniprot
Match: A0A832HUE7_9BACT (DUF4962 domain-containing protein n=1 Tax=Verrucomicrobia subdivision 3 bacterium TaxID=2052186 RepID=A0A832HUE7_9BACT)

HSP 1 Score: 117 bits (293), Expect = 1.300e-25
Identity = 78/227 (34.36%), Postives = 119/227 (52.42%), Query Frame = 1
Query:    1 NLFYMARKYNVPACAEFARIRSNTSPLLKSSVNILSRQLLWYTPQGSQDDLNALPLDKVYPDVAVLVSRSSWNYVEHEGEAFFGLKGGDNTWNHGHLSLGNFVFLFSGTAVAIDLGAGSYALPDYFGPKRWDYYRTNSSGHNVIQFDGK---NQDTSASASFVSTGLLGKDGAWGVLDMSKAWTGGSMQR-GGALISGRQQVVLRDEISPPSSAKKTTWSMHTPTNV 669
            +L++MAR++N PA A +    ++ SPL           ++W+   G++  + + PLDK Y    V   RS+W   + +   F G K GDN  NH +L LG+FV    G   A DLG+  Y LPDYFG KRW YYR  + GHN I  +     +QD  A+A  V       + A+ + D++ A+   + +   G  + GR+QV+++DEI+    A+   W MHT   +
Sbjct:  308 HLYWMARQFNRPAYAWYQDQVASGSPL----------DIIWHNDLGARYSVESEPLDKYYRGAEVASFRSAW---KDKNALFIGFKAGDNKANHSNLDLGSFVLDALGVRWAEDLGSDDYNLPDYFGNKRWTYYRLRAEGHNTIVLNPDMQPDQDPRAAARIVRFESR-PERAFAIADLTAAYVRNAAKAMRGITMLGRRQVLVQDEITAKQPAELW-WFMHTQAKI 519          
BLAST of mRNA_M-pyrifera_M_contig66812.16179.1 vs. uniprot
Match: A0A3D5YYY4_9BACT (Heparinase n=2 Tax=Bacteroidetes TaxID=976 RepID=A0A3D5YYY4_9BACT)

HSP 1 Score: 107 bits (266), Expect = 5.040e-22
Identity = 97/323 (30.03%), Postives = 154/323 (47.68%), Query Frame = 1
Query:    7 FYMARKYNVPACAEFARIRSNTSPLLKSSVNILSRQLLWYTPQGSQDDLNALPLDKVYP-DVAVLVSRSSWNYVEHEGEAFFGLKGGDNTWNHGHLSLGNFVFLFSGTAVAIDLGAGSYALPDYFGPKRWDYYRTNSSGHNVIQFDGKNQDTSASASFVSTGLLGKDGA--WGVLDMSKAWT--GGSMQRGGALISGRQQVVLRDEISPPSSAKKTTWSMHTPTNVTVLSSTAAKLEFVIASDGRKITTYAWVVSSSSTCPGVKVEAFTPHLASPQKSLDGITKVQFSAPASTCTI-LSIAVGPMEP----NSDLTVNPLNQW 945
            F++A  YN    ++F   +  T      + N+    ++W+ P  +        LDK +   V++  SRSSW         + G+K G N  NH HL LGNF     G   A DLG+  Y LPDYFG KR+ YYR  S  HNV   +G+NQ   A++ F+  G   +D A  + VLD S A+     S  RG  +I  R+  +++DE     SA+   W M T   + +++   A+L       G+K+T  A ++S  +       ++ +    +PQK   G++++    PA+T  + +S+ + P  P    N    + PL +W
Sbjct:  327 FWLAGVYNNNHFSDFVIEQLETR-----TANVFD--VIWFRPYANSAAKR--DLDKFFDGSVSLYFSRSSWT---DPNALWIGIKAGYNKVNHAHLDLGNFELDALGVRWARDLGSDDYNLPDYFGSKRYTYYRLQSVSHNVPLLNGQNQREDATSKFIKHG---EDIAEPFSVLDFSGAYKDFASSALRGMKVIENRKSALIQDEFILTKSAE-VVWGMTTDATIQIINPQQAELTL----GGQKMT--AKILSPENAV----FKSESALQVAPQKLNTGVSRLLAKVPATTGNVTVSVLLSPQWPGITSNYSGEILPLEKW 623          
BLAST of mRNA_M-pyrifera_M_contig66812.16179.1 vs. uniprot
Match: A0A3M1IIF5_9BACT (Uncharacterized protein n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A3M1IIF5_9BACT)

HSP 1 Score: 106 bits (265), Expect = 9.800e-22
Identity = 102/348 (29.31%), Postives = 141/348 (40.52%), Query Frame = 1
Query:    4 LFYMARKYNVPACAEFARIRSNTSPLLKSSVNILSRQLLWYTPQGSQDDLNALPLDKV---------YPDVAVLVSRSSWNYVEHEGEAFF-GLKGGDNTWNHGHLSLGNFVFLFSGTAVAIDLGAGSYALPDYFGPKRWDYYRTNSSGHNVIQFD-GKNQDTSASASFVSTGLLGK-DGAWGVLDMSKAWTGGS-MQRGGALISGRQQVVLRDEISPPSSAKKTTWS-MHTPTNVTVLSSTAAKLEFVIASDGRKITTYA---------------WVVSSSSTCPGVKVEAFTPHLASPQKSLDGITKVQFSAPASTCTILSIAVGPMEPNSDLTVNP-----LNQW 945
            LF++AR++  PA A   R  +    L           LLWY            P D           Y    V   RS W     + EA F G KGGD   +HGHL  G  V    G    +DLG  SYALP YFG KRW YYR  + GHN +    G + D    A         + D AW + D++ A+     + RG  L +GR+  +++DEI    +  + TWS +H  T V          E  +ASDGR+    A               W V  ++  PG      +P+ A  Q   +G  K+    PA     L++ + P+ P     V P     L++W
Sbjct:  649 LFWLARRFAAPAYAAHQRDHAAREAL----------DLLWYVDAAEAPPAGEPPRDIAFLGPTGTAPYAPAEVATLRSGW-----DSEALFVGFKGGDLGASHGHLDAGTLVLDALGRRWLVDLGGDSYALPSYFGSKRWTYYRLRAEGHNTLVIGAGSDPDQRVGAHAPLIAFESREDRAWAIADLTPAYVDARRLWRGVMLFNGRRDALVQDEIEL--AGPRDTWSFLHLNTGV----------EVQLASDGRRALLTAGGDRLWAEIVSAEGRWEVLPAAPLPG------SPNPAG-QNPNEGYRKLAMHLPALEHATLAVWLHPLLPGEPPPVEPPALRPLDRW 962          
BLAST of mRNA_M-pyrifera_M_contig66812.16179.1 vs. uniprot
Match: UPI0019B9B71D (Heparinase II/III family protein n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=UPI0019B9B71D)

HSP 1 Score: 105 bits (262), Expect = 1.690e-21
Identity = 88/284 (30.99%), Postives = 137/284 (48.24%), Query Frame = 1
Query:  115 LLWYTPQGSQDDLNALPLDKVYPD-VAVLVSRSSWNYVEHEGEAFFGLKGGDNTWNHGHLSLGNFVFLFSGTAVAIDLGAGSYALPDYFGPKRWDYYRTNSSGHNVIQFDGKNQDTSASASFVSTGLLGKDGAWGVLDMSKAWT--GGSMQRGGALISGRQQVVLRDEISPPSSAKKTTWSMHTPTNVTVLSSTAAKLEFVIASDGRKITTYAWVVSSSSTCPGVKVEAFTPHLASPQKSLDGITKVQFSAPASTCTI-LSIAVGPMEPNSDLT---VNPLNQW 945
            ++W+ P          PLD  +   V++  SRSSW         + G K G N  NH HL LGNF     G   A DLG+  Y LPDYFG KR+ YYR  S  HNV   +G+NQ    ++ F+  G  G    + V+D + A+       QRG  L+  R+ ++++DE     SA+   W M T  ++ ++ S  A+L      +G+K+   A +++ S+    V+    +   A PQK    ++++    P +  +I  +I + P  P S  T   V PL++W
Sbjct:  356 IIWFQPYAHSAANR--PLDIFFDGKVSLYFSRSSWI---DPNALWIGFKAGYNKVNHAHLDLGNFELDALGVRWARDLGSDDYNLPDYFGSKRYTYYRLQSISHNVPVLNGQNQRQDGTSQFIKHGE-GISEPYAVIDFTSAYKDFASLAQRGIKLLDNRKSILIQDEFILTKSAEYM-WGMTTDASIQIIGSKEAELTL----NGQKMK--ARILAPSNAVFTVE----SAQQAKPQKENRDVSRLLAKVPETIGSITFAIQLSPQWPGSVATTTIVEPLSEW 622          
BLAST of mRNA_M-pyrifera_M_contig66812.16179.1 vs. uniprot
Match: A0A386PLT1_CLOSE (DUF4962 domain-containing protein n=2 Tax=Clostridium septicum TaxID=1504 RepID=A0A386PLT1_CLOSE)

HSP 1 Score: 100 bits (249), Expect = 1.130e-19
Identity = 76/221 (34.39%), Postives = 111/221 (50.23%), Query Frame = 1
Query:   88 SSVNILSRQLLWYTPQGSQDDLNALPLDKVYPDVAVLVSRSSWNYVEHEGEAFFGLKGGDNTWNHGHLSLGNFVFLFSGTAVAIDLGAGSYALPDYF----GPKRWDYYRTNSSGHNVIQFDGK---NQDTSASASFVSTGLLGKDGAWGVLDMSKAWTGGSMQ--RGGALISGRQQVVLRDEISPPSSAKKTTWSMHTPTNVTVLSSTAAKLEFVIASDG 723
            S VN+    LLWY P   + D     LDK+Y + +V+  R  W   E    +F G KGG N   HG L +G+FV+   G   A+DLG  +Y L  Y+      KRW YYR N+ GHN +  +     NQ   A +  +   L GKDG +GVLD++ A+   +++  RG   I+ R ++++RDE       +   W MHT  +  ++ +  A    VI  DG
Sbjct:  959 SIVNVYD--LLWYDPNLYKGDAPK-ELDKMYKNQSVITMRKDWGNKE---SSFLGFKGGLNGAPHGDLDIGSFVYDSLGVRWAMDLGKENYNLQGYWENTENGKRWSYYRKNAEGHNTLVINPSKEINQVVPAYSEVIDKKLNGKDGGYGVLDLTSAYENYAVKVNRGFNFIN-RNELLMRDEFLLKREGE-VIWQMHTKADADIVENGKA----VILKDG 1167          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig66812.16179.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
A0A7C2CZY7_9BACT9.980e-3134.92Coagulation factor 5/8 type domain-containing prot... [more]
A0A7V3AH55_9BACT7.250e-2830.12DUF4962 domain-containing protein n=1 Tax=Planctom... [more]
A0A7V6DQS8_9DELT1.350e-2737.83Uncharacterized protein n=1 Tax=Desulfobacca aceto... [more]
A0A7C3N778_9BACT1.800e-2735.24DUF4962 domain-containing protein n=1 Tax=Armatimo... [more]
A0A7C5YB45_9BACT1.510e-2635.34DUF4962 domain-containing protein n=1 Tax=Armatimo... [more]
A0A832HUE7_9BACT1.300e-2534.36DUF4962 domain-containing protein n=1 Tax=Verrucom... [more]
A0A3D5YYY4_9BACT5.040e-2230.03Heparinase n=2 Tax=Bacteroidetes TaxID=976 RepID=A... [more]
A0A3M1IIF5_9BACT9.800e-2229.31Uncharacterized protein n=1 Tax=Verrucomicrobia ba... [more]
UPI0019B9B71D1.690e-2130.99Heparinase II/III family protein n=1 Tax=Verrucomi... [more]
A0A386PLT1_CLOSE1.130e-1934.39DUF4962 domain-containing protein n=2 Tax=Clostrid... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig66812contigM-pyrifera_M_contig66812:2..970 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score115.5
Seed ortholog evalue4.4e-23
Seed eggNOG ortholog471853.Bcav_3391
Hectar predicted targeting categoryother localisation
EggNOG free text desc.unsaturated chondroitin disaccharide hydrolase activity
EggNOG OGsCOG4225@1,COG4225@2
COG Functional cat.S
Best tax levelBacteria
Best eggNOG OGNA|NA|NA
Exons1
Model size969
Cds size957
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816558.4223962-UTR-M-pyrifera_M_contig66812:1..131622816558.4223962-UTR-M-pyrifera_M_contig66812:1..13Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig66812 2..13 +
1692278045.9718425-UTR-M-pyrifera_M_contig66812:1..131692278045.9718425-UTR-M-pyrifera_M_contig66812:1..13Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig66812 2..13 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816558.4338772-CDS-M-pyrifera_M_contig66812:13..9701622816558.4338772-CDS-M-pyrifera_M_contig66812:13..970Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig66812 14..970 +
1692278045.9846148-CDS-M-pyrifera_M_contig66812:13..9701692278045.9846148-CDS-M-pyrifera_M_contig66812:13..970Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig66812 14..970 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig66812.16179.1prot_M-pyrifera_M_contig66812.16179.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig66812 14..970 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig66812.16179.1

>prot_M-pyrifera_M_contig66812.16179.1 ID=prot_M-pyrifera_M_contig66812.16179.1|Name=mRNA_M-pyrifera_M_contig66812.16179.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=319bp
MARKYNVPACAEFARIRSNTSPLLKSSVNILSRQLLWYTPQGSQDDLNAL
PLDKVYPDVAVLVSRSSWNYVEHEGEAFFGLKGGDNTWNHGHLSLGNFVF
LFSGTAVAIDLGAGSYALPDYFGPKRWDYYRTNSSGHNVIQFDGKNQDTS
ASASFVSTGLLGKDGAWGVLDMSKAWTGGSMQRGGALISGRQQVVLRDEI
SPPSSAKKTTWSMHTPTNVTVLSSTAAKLEFVIASDGRKITTYAWVVSSS
STCPGVKVEAFTPHLASPQKSLDGITKVQFSAPASTCTILSIAVGPMEPN
SDLTVNPLNQWPKEGPTK*
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mRNA from alignment at M-pyrifera_M_contig66812:2..970+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig66812.16179.1 ID=mRNA_M-pyrifera_M_contig66812.16179.1|Name=mRNA_M-pyrifera_M_contig66812.16179.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=969bp|location=Sequence derived from alignment at M-pyrifera_M_contig66812:2..970+ (Macrocystis pyrifera P11B4 male)
AATTTGTTCTACATGGCGAGGAAGTACAACGTTCCAGCTTGTGCAGAATT TGCTCGTATTCGATCCAATACTTCACCACTCCTCAAGTCTTCAGTAAACA TTTTATCTCGACAATTGCTTTGGTACACACCTCAGGGGTCTCAAGATGAC TTGAATGCTCTGCCTTTGGACAAGGTTTATCCTGATGTTGCGGTGTTGGT GTCTCGATCATCCTGGAACTATGTGGAACACGAGGGGGAAGCATTCTTTG GGTTGAAGGGTGGTGACAACACTTGGAATCACGGCCATCTCTCGCTGGGC AACTTTGTCTTCCTCTTCTCTGGAACTGCGGTTGCCATTGATTTGGGGGC TGGAAGTTATGCGTTGCCTGATTACTTTGGCCCCAAGAGGTGGGATTACT ACAGGACGAATTCCTCTGGCCATAATGTCATTCAATTTGACGGGAAGAAT CAAGACACCTCCGCTAGTGCTTCATTCGTCTCCACTGGTTTACTTGGAAA AGATGGAGCATGGGGAGTGTTGGATATGTCAAAGGCTTGGACAGGGGGAT CTATGCAACGTGGTGGTGCTCTCATTAGCGGACGGCAACAAGTTGTACTT CGTGATGAAATATCACCACCTTCCTCTGCCAAGAAAACAACTTGGTCGAT GCACACACCCACAAACGTCACTGTACTGTCGAGCACAGCTGCAAAGTTGG AGTTTGTCATCGCATCTGATGGGCGCAAAATTACAACATATGCTTGGGTG GTATCATCCTCGTCAACATGTCCTGGTGTGAAAGTGGAAGCGTTCACTCC ACACCTCGCATCTCCACAAAAGTCGTTGGATGGAATCACCAAAGTCCAAT TCTCTGCACCAGCTTCCACTTGCACAATCCTTTCCATCGCAGTCGGTCCC ATGGAACCCAATTCAGACCTAACCGTAAATCCGCTGAACCAATGGCCAAA AGAAGGCCCTACGAAGTGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig66812:2..970+

>mRNA_M-pyrifera_M_contig66812.16179.1 ID=mRNA_M-pyrifera_M_contig66812.16179.1|Name=mRNA_M-pyrifera_M_contig66812.16179.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1914bp|location=Sequence derived from alignment at M-pyrifera_M_contig66812:2..970+ (Macrocystis pyrifera P11B4 male)
ATGGCGAGGAAGTACAACGTTCCAGCTTGTGCAGAATTTGCTCGTATTCG
ATCCAATACTTCACCACTCCTCAAGTCTTCAGTAAACATTTTATCTCGAC
AATTGCTTTGGTACACACCTCAGGGGTCTCAAGATGACTTGAATGCTCTG
CCTTTGGACAAGGTTTATCCTGATGTTGCGGTGTTGGTGTCTCGATCATC
CTGGAACTATGTGGAACACGAGGGGGAAGCATTCTTTGGGTTGAAGGGTG
GTGACAACACTTGGAATCACGGCCATCTCTCGCTGGGCAACTTTGTCTTC
CTCTTCTCTGGAACTGCGGTTGCCATTGATTTGGGGGCTGGAAGTTATGC
GTTGCCTGATTACTTTGGCCCCAAGAGGTGGGATTACTACAGGACGAATT
CCTCTGGCCATAATGTCATTCAATTTGACGGGAAGAATCAAGACACCTCC
GCTAGTGCTTCATTCGTCTCCACTGGTTTACTTGGAAAAGATGGAGCATG
GGGAGTGTTGGATATGTCAAAGGCTTGGACAGGGGGATCTATGCAACGTG
GTGGTGCTCTCATTAGCGGACGGCAACAAGTTGTACTTCGTGATGAAATA
TCACCACCTTCCTCTGCCAAGAAAACAACTTGGTCGATGCACACACCCAC
AAACGTCACTGTACTGTCGAGCACAGCTGCAAAGTTGGAGTTTGTCATCG
CATCTGATGGGCGCAAAATTACAACATATGCTTGGGTGGTATCATCCTCG
TCAACATGTCCTGGTGTGAAAGTGGAAGCGTTCACTCCACACCTCGCATC
TCCACAAAAGTCGTTGGATGGAATCACCAAAGTCCAATTCTCTGCACCAG
CTTCCACTTGCACAATCCTTTCCATCGCAGTCGGTCCCATGGAACCCAAT
TCAGACCTAACCGTAAATCCGCTGAACCAATGGCCAAAAGAAGGCCCTAC
GAAGTGAATGGCGAGGAAGTACAACGTTCCAGCTTGTGCAGAATTTGCTC
GTATTCGATCCAATACTTCACCACTCCTCAAGTCTTCAGTAAACATTTTA
TCTCGACAATTGCTTTGGTACACACCTCAGGGGTCTCAAGATGACTTGAA
TGCTCTGCCTTTGGACAAGGTTTATCCTGATGTTGCGGTGTTGGTGTCTC
GATCATCCTGGAACTATGTGGAACACGAGGGGGAAGCATTCTTTGGGTTG
AAGGGTGGTGACAACACTTGGAATCACGGCCATCTCTCGCTGGGCAACTT
TGTCTTCCTCTTCTCTGGAACTGCGGTTGCCATTGATTTGGGGGCTGGAA
GTTATGCGTTGCCTGATTACTTTGGCCCCAAGAGGTGGGATTACTACAGG
ACGAATTCCTCTGGCCATAATGTCATTCAATTTGACGGGAAGAATCAAGA
CACCTCCGCTAGTGCTTCATTCGTCTCCACTGGTTTACTTGGAAAAGATG
GAGCATGGGGAGTGTTGGATATGTCAAAGGCTTGGACAGGGGGATCTATG
CAACGTGGTGGTGCTCTCATTAGCGGACGGCAACAAGTTGTACTTCGTGA
TGAAATATCACCACCTTCCTCTGCCAAGAAAACAACTTGGTCGATGCACA
CACCCACAAACGTCACTGTACTGTCGAGCACAGCTGCAAAGTTGGAGTTT
GTCATCGCATCTGATGGGCGCAAAATTACAACATATGCTTGGGTGGTATC
ATCCTCGTCAACATGTCCTGGTGTGAAAGTGGAAGCGTTCACTCCACACC
TCGCATCTCCACAAAAGTCGTTGGATGGAATCACCAAAGTCCAATTCTCT
GCACCAGCTTCCACTTGCACAATCCTTTCCATCGCAGTCGGTCCCATGGA
ACCCAATTCAGACCTAACCGTAAATCCGCTGAACCAATGGCCAAAAGAAG
GCCCTACGAAGTGA
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