mRNA_M-pyrifera_M_contig66579.16141.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig66579.16141.1
Unique NamemRNA_M-pyrifera_M_contig66579.16141.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig66579.16141.1 vs. uniprot
Match: A0A2P6TCB6_CHLSO (Endoglucanase n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TCB6_CHLSO)

HSP 1 Score: 88.6 bits (218), Expect = 4.370e-16
Identity = 78/272 (28.68%), Postives = 114/272 (41.91%), Query Frame = 1
Query:    4 WVCTSKALEESGLAKRVVIINDFQAIGYALPVALRLDLATPFLTPPTPAPRLPLTCLGPGTGLGACGVVRGSDGASLSI-CSESGMVEFAARSERELRLKQHVAKELEAEERASGPHVTVEDIVSGTGLPRIFRFVKQEQXXXXXXXXXXXXXXXXXXXLIGGAEVSRLAEEGDAVALEALSLFASVLTHELRRQALAFLAYGGAVIAGGLIVHAPVRKAVREAIEKEFVSGDPVMGSILAKMPVYALKTGDVGLLGARVKALQTLGRNVEE 816
            WV   KA  E     R  ++NDF+A+GY +PV    DL      P     + P   LGPGTGLG   +       +  +  SE     FA R  ++  L+ HV +E          H +VE +  G GL RI+ F++ ++                   + GGA       + D VA+EAL +F S++  E    AL  LA GG  + GG+      R      +E            +L  +P+Y +    VGLLG R  A++ +    EE
Sbjct:  703 WVI-DKAEVEKEFGIRCTVLNDFEAVGYGVPVLTDGDLVVLHDVPAVD--KGPKAVLGPGTGLGEAQLFWDDATGNYKVHASEGSHATFAPRGWKQRALQAHVEQER--------GHCSVERVACGDGLVRIYNFLRSDEPSQYPQDRMDRSKEVTPADITGGA-----LNKSDPVAVEALDMFLSIVGAEAGHMALRSLATGGVYVCGGIPPRVIERVKAGGMLEAFLWRASRFHDKVLKDIPLYVVTNDKVGLLGTRECAIRIVEAMREE 958          
BLAST of mRNA_M-pyrifera_M_contig66579.16141.1 vs. uniprot
Match: A0A0L0DLX5_THETB (Glucokinase n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DLX5_THETB)

HSP 1 Score: 85.1 bits (209), Expect = 1.660e-15
Identity = 72/212 (33.96%), Postives = 99/212 (46.70%), Query Frame = 1
Query:    4 WVCTSKALE-ESGLAKRVVIINDFQAIGYALPVALRLDLATPFLTPPTPAPRLPLTCLGPGTGLGACGVVR-GSDGASLSICSESGMVEFAARSERELRLKQHVAKELEAEERASGPHVTVEDIVSGTGLPRIFRFVKQEQXXXXXXXXXXXXXXXXXXXLIGGAEVSRLAEEGDAVALEALSLFASVLTHELRRQALAFLAYGGAVIAGGL 633
            W      LE E G+AK V++ NDF A+GY L      DL T  L    P P  P+ C+G GTGLG C +   G D   ++  SE G  EFA R+E EL +   +      + R     ++VE +VSG GL  I+ F++ +                       GA ++  A EGD +   AL +  S    E+   AL +L YGG  +AGGL
Sbjct:   98 WCFAEDVLETELGIAK-VLLANDFLALGYGLLTLGDSDLLT--LQDVAPRPGAPIACVGAGTGLGECFLAAAGPDADYVAFPSEGGHAEFAPRNELELEMLAFLKDRFSEKNR-----ISVERVVSGPGLANIYDFLRAKFPHAVCDAADARILAADAQR---GALIAEAAAEGDELCSRALDILFSAYGSEVGVAALKWLPYGGLYVAGGL 298          
BLAST of mRNA_M-pyrifera_M_contig66579.16141.1 vs. uniprot
Match: A0A2G1QLK4_9HYPH (Glucokinase n=1 Tax=Zhengella mangrovi TaxID=1982044 RepID=A0A2G1QLK4_9HYPH)

HSP 1 Score: 84.7 bits (208), Expect = 2.650e-15
Identity = 80/276 (28.99%), Postives = 123/276 (44.57%), Query Frame = 1
Query:    4 WVCTSKALEESGLAKRVVIINDFQAIGYALPVALRLDLATPFLTPPTP--APRLPLTCLGPGTGLGACGVVRGSDGASLSICSESGMVEFAARSERELRLKQHVAKELEAEERASGPHVTVEDIVSGTGLPRIFRFVKQEQXXXXXXXXXXXXXXXXXXXLIGGAEVSRLAEEGDAVALEALSLFASVLTHELRRQALAFLAYGGAVIAGGLIVHAPVRKAVREAIEKEFVSGDPVMGSILAKMPVYALKTGDVGLLGARVKALQTLGRNVEEEIH 825
            WV    A++ +    +V ++NDF A G A   +L LD        P    APR+    +GPGTGLG   ++R   G  + I  E G ++   R+ERE  L  H+           G  + VE  VSG GL  ++R +++                      +  A+V+  A  G+A+A+EA++LF ++L       AL  LA+GG  +AGG+  H  +   VR    ++     P    I+A++P+Y +  G   L G    A       VE  IH
Sbjct:   80 WVIDPAAVKAALGLSQVHVMNDFMAQGLAC-ASLPLDTMQQIGGHPREEAAPRV---VVGPGTGLGVAQLIRAC-GKWIVIPGEGGHLDLGPRTEREFALWPHLEMR--------GCRLEVEMAVSGQGLENLYRGLRR------------LDRHPDREEAVSAAQVTERAHSGEALAVEAVTLFTTILARFCGDLALLTLAHGGVYLAGGMTAH--LIDLVRGPAFRQAFEDKPPFSGIMAEIPLYLMPGGTPALDGIAAYAADPQAFEVERAIH 328          
BLAST of mRNA_M-pyrifera_M_contig66579.16141.1 vs. uniprot
Match: A0A4Q9TJX9_9GAMM (Glucokinase n=7 Tax=Pseudoxanthomonas winnipegensis TaxID=2480810 RepID=A0A4Q9TJX9_9GAMM)

HSP 1 Score: 84.0 bits (206), Expect = 5.600e-15
Identity = 80/257 (31.13%), Postives = 121/257 (47.08%), Query Frame = 1
Query:    4 WVCTSKALEESGLAKRVVIINDFQAIGYALPVALRLDLATPFLTPPTPAPRLPLTCLGPGTGLGACGVVRGSDGASLSICSESGMVEFAARSERELRLKQHVAKELEAEERASGPHVTVEDIVSGTGLPRIFRFVKQEQXXXXXXXXXXXXXXXXXXXLIGGAEVSRLAEEGDAVALEALSLFASVLTHELRRQALAFLAYGGAVIAGGLIVHAPVRKAVREAIEKEFVSGDPVMGSILAKMPVYALKTGDVGLLGA 774
            W   + AL ++   + V ++NDF+A+GYAL    +       L  PT A   P+  +GPGTGLGA   + G+ G  + + +E+G + FAA S RE  +   +A +        G +V VE IVSG GL  ++  +                        +   E    A + DA A EA+S+F + L       ALAF+A GG  +AGG +       A R A    F+ G     ++LA +PV+ ++ G  G+LGA
Sbjct:   97 WPIGTGALRQALGLEHVAVLNDFEALGYALEGFAQQRR---HLCGPTVAGDGPVLVIGPGTGLGAVVHLPGAAG-GVVLTTEAGQMAFAAHSLRERAVLSELAPQ--------GGYVEVERIVSGRGLLTLYTAL---------------CALDGVAPRLQAPEAVTAAAQDDAQAAEAVSMFCAALGGLAGDLALAFMATGGVYLAGGFLSSMQAELA-RSAFHPRFLHGRSAR-TLLAPVPVWVVEHGRNGVLGA 324          
BLAST of mRNA_M-pyrifera_M_contig66579.16141.1 vs. uniprot
Match: UPI0018D1A40F (glucokinase n=1 Tax=Methylobrevis albus TaxID=2793297 RepID=UPI0018D1A40F)

HSP 1 Score: 83.2 bits (204), Expect = 9.830e-15
Identity = 64/210 (30.48%), Postives = 102/210 (48.57%), Query Frame = 1
Query:    4 WVCTSKALEESGLAKRVVIINDFQAIGYALPVALRLDLATPFLTPPTPAPRLPLTCLGPGTGLGACGVVRGSDGASLSICSESGMVEFAARSERELRLKQHVAKELEAEERASGPHVTVEDIVSGTGLPRIFRFVKQEQXXXXXXXXXXXXXXXXXXXLIGGAEVSRLAEEGDAVALEALSLFASVLTHELRRQALAFLAYGGAVIAGGL 633
            W+   +AL ++    +V++ NDF+A+  ALP     DLA   + P  P P      +GPGTGLGA G++    G+ + +  E G ++ A  ++R+  +  HV +        +G  ++ E +V G+GL R++R +                       L   A V+  AE G+  A EA+ LFA  L   +   AL FLA+GG  +AGG+
Sbjct:   87 WIIEPRALIDAFGLDQVLLFNDFEALSLALPTLAGDDLAP--IGPQVPPPTGNRIVVGPGTGLGAAGLLN-VGGSWVPVAGEGGHIDLAPMTDRDNAIWPHVER--------TGGRISGETLVCGSGLLRLYRAIAATDGLPAP--------------LDTPAAVTAAAEAGEPAAREAVELFAEYLGRTVGNLALVFLAHGGVYLAGGI 271          
BLAST of mRNA_M-pyrifera_M_contig66579.16141.1 vs. uniprot
Match: C0N6V2_9GAMM (Glucokinase n=2 Tax=Methylophaga thiooxydans TaxID=392484 RepID=C0N6V2_9GAMM)

HSP 1 Score: 81.6 bits (200), Expect = 3.140e-14
Identity = 73/254 (28.74%), Postives = 119/254 (46.85%), Query Frame = 1
Query:   49 RVVIINDFQAIGYALPVALRLDLATPFLTPPTPAPRLPLTCLGPGTGLGACGVVRGSDGASLSICSESGMVEFAARSERELRLKQHVAKELEAEERASGPHVTVEDIVSGTGLPRIFRFVKQEQXXXXXXXXXXXXXXXXXXXLIGGAEVSRLAEEGDAVALEALSLFASVLTHELRRQALAFLAYGGAVIAGGLIVHAPVRKAVREAIEK-EFVSG---DPVMGSILAKMPVYALKTGDVGLLGARVKALQTL 798
            RV++ NDF+A+GY +      DL T     P P PR     +G GTGLG   +V+ +D   +   +E G  +FA     ++RL +H+ +           HV+ E +VSG+GL  I+ F++  +                   +I     S  A +G+ +A EA++LF S+   +    AL  +   G  IAGG+           E +EK EF++       M ++L ++PV  +   +VGL GAR+ A + +
Sbjct:   94 RVILCNDFEAVGYGVEALEEHDLLTLHAGQPAPGPR---ALIGAGTGLGQAYLVQQADEWQV-FATEGGHTDFAPTDRTQVRLLEHLFERF--------GHVSYERLVSGSGLETIYHFLRDYRQYEEDSDCRLAMMKADAASVI-----SEFARKGEPLAKEAMNLFFSIYGAQAGNLALTVMPKAGLYIAGGIAAKN------LELLEKAEFMTAFLNKGRMQALLERIPVKVILDPEVGLNGARLLASKAM 324          
BLAST of mRNA_M-pyrifera_M_contig66579.16141.1 vs. uniprot
Match: A0A1I4RRS8_9HYPH (Glucokinase n=5 Tax=Pleomorphomonas TaxID=261933 RepID=A0A1I4RRS8_9HYPH)

HSP 1 Score: 81.6 bits (200), Expect = 3.520e-14
Identity = 74/231 (32.03%), Postives = 107/231 (46.32%), Query Frame = 1
Query:    4 WVCTSKALEESGLAKRVVIINDFQAIGYALPVALRLDLATPFLTPPTPAPRLPLTCLGPGTGLGACGVVRGSDGASLSICSESGMVEFAARSERELRLKQHVAKELEAEERASGPHVTVEDIVSGTGLPRIFRFVKQEQXXXXXXXXXXXXXXXXXXXLIGGAEVSRLAEEGDAVALEALSLFASVLTHELRRQALAFLAYGGAVIAGGL---IVHAPVRKAVREAIEKEF 687
            WV T + L E    + V++ NDF+A+G  LP     DL    +    P  R     +GPGTGLGA G+V  + G  + +  E G ++ A  + R+  +  H+       ERA G  VT E I+ G+GL R++R V                           A V+  AE GD +A+E ++LFA  L       AL FLA+GG  +AGG+   IV    +   R A E ++
Sbjct:   88 WVVTPRRLVERFALEHVILFNDFEALGLCLPGLKPKDLVA--VGGALPPERGTKVVIGPGTGLGAAGLVDAA-GLWVPVPGEGGHIDLAPVTARDYDIWPHI-------ERAGG-RVTGETIICGSGLLRLYRAVAAAGKSFAACDTP--------------AAVTAAAEAGDPLAVETVALFAEHLGRIAGNLALTFLAHGGVYLAGGIAPRIVKVLQQGGFRAAFEDKY 293          
BLAST of mRNA_M-pyrifera_M_contig66579.16141.1 vs. uniprot
Match: UPI0015EE6967 (glucokinase n=2 Tax=Pleomorphomonadaceae TaxID=2843308 RepID=UPI0015EE6967)

HSP 1 Score: 81.3 bits (199), Expect = 4.980e-14
Identity = 81/267 (30.34%), Postives = 122/267 (45.69%), Query Frame = 1
Query:    4 WVCTSKALEESGLAKRVVIINDFQAIGYALPVALRLDLATPFLTPPTPAPRLPLTCLGPGTGLGACGVVRGSDGASLSICSESGMVEFAARSERELRLKQHVAKELEAEERASGPHVTVEDIVSGTGLPRIFRFVKQEQXXXXXXXXXXXXXXXXXXXLIGGAEVSRLAEEGDAVALEALSLFASVLTHELRRQALAFLAYGGAVIAGGLI--VHAPVRKA-VREAIEKEFVSGDPVMGSILAKMPVYALKTGDVGLLGARVKALQT 795
            WV   +AL +      V++ NDF+A+  +LP     DL    + P  P        +GPGTGLGA G+V  +  + + +  E G ++ A  + R+L++  H+ +         G  V+ E IV G+G+ R++R +                           AEV+  AE GD +A E L LFA  L       ALAFLA GG  +AGG+   + A +RK   R A E ++  G     ++LA +P  A+ T D   L   V   +T
Sbjct:   92 WVVEPRALLDRFDLDHVILFNDFEALALSLPALEAKDLVA--IGPALPPDDGTKIVVGPGTGLGAAGLVHAAH-SWIPVPGEGGHIDLAPVTARDLQIWPHIDR--------VGERVSGETIVCGSGMVRLYRAIAAADGLPAVCTTP--------------AEVTAAAEAGDPLAAETLDLFAVHLGRVAGSLALAFLAKGGVYLAGGIPPRIAATLRKGGFRAAFEDKWPHG-----ALLASIPT-AIITHDRPALAGLVAFART 327          
BLAST of mRNA_M-pyrifera_M_contig66579.16141.1 vs. uniprot
Match: A0A2P6VAW4_9CHLO (Glucokinase n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VAW4_9CHLO)

HSP 1 Score: 81.3 bits (199), Expect = 5.400e-14
Identity = 71/250 (28.40%), Postives = 108/250 (43.20%), Query Frame = 1
Query:   49 RVVIINDFQAIGYALPVALRLDLATPFLTPPTPAPRLPLTCLGPGTGLGACGVVRGSDGASLSI-CSESGMVEFAARSERELRLKQHVAKELEAEERASGPHVTVEDIVSGTGLPRIFRFVKQEQXXXXXXXXXXXXXXXXXXXLIGGAEVSRLA-EEGDAVALEALSLFASVLTHELRRQALAFLAYGGAVIAGGLIVHAPVRKAVREAIEKEFVSGDPVMGSILAKMPVYALKTGDVGLLGARVKALQ 792
            R  ++NDF+AIGY +PV    DL    L       + P   LGPGTGLG   +          +  SE     FA R  ++  L+ HV         A   H +VE +  G+GL RI+ F++ ++                    +  A+V+    ++ DAVA+EAL +F S++  E    AL  L  GG  I GG+      R      +E            +L  +P+Y +    +GLLG R +A++
Sbjct:  106 RCTVLNDFEAIGYGVPVLTDNDLVV--LNDVPAEDKGPKAVLGPGTGLGEAQLFWDDRSNGYKVHASEGAHATFAPRGWKQRALQAHVE--------AERGHCSVERVACGSGLVRIYDFLRSDEPSQYPQDRMDRGKQ------VTPADVTNSGLDKSDAVAVEALDMFLSIVGAEAGHMALRGLTSGGVYICGGIFPKVIERVKAGGVLEAFLWRASRFYEKVLKDIPLYVVTEEKLGLLGTREQAIR 339          
BLAST of mRNA_M-pyrifera_M_contig66579.16141.1 vs. uniprot
Match: A0A2E1Y190_9HYPH (Glucokinase n=1 Tax=Phyllobacteriaceae bacterium TaxID=1871068 RepID=A0A2E1Y190_9HYPH)

HSP 1 Score: 80.1 bits (196), Expect = 1.310e-13
Identity = 80/277 (28.88%), Postives = 123/277 (44.40%), Query Frame = 1
Query:    4 WVCTSKALEESGLAKRVVIINDFQAIGYA---LPVALRLDLATPFLTPPTPAPRLPLTCLGPGTGLGACGVVRGSDGASLSICSESGMVEFAARSERELRLKQHVAKELEAEERASGPHVTVEDIVSGTGLPRIFRFVKQEQXXXXXXXXXXXXXXXXXXXLIGGAEVSRLAEEGDAVALEALSLFASVLTHELRRQALAFLAYGGAVIAGGLIVHAPVRKAVREAIEKEFVSGDPVMGSILAKMPVYALKTGDVGLLGARVKALQTLGRNVEEEIH 825
            W+    A+ ++   ++V ++NDF A G A   LP+ +   +          APR+    +GPGTGLG   VVR   G  + I  E G ++   R+ RE  L  H+           G  + VE  VSG GL  + R +++ +                    +  A ++ LA +GDA+A+EA++LF ++L       AL  LA GG  +AGG+  H  +   VR    +      P   SI+A++P+Y +  G   L G    A       VE  IH
Sbjct:   95 WIIDPAAIRKALGLEQVRVMNDFLAQGLACASLPLGVMQQIGGHARE--EEAPRV---VIGPGTGLGVAQVVRAC-GKWVVIPGEGGHLDLGPRTAREFSLWPHLDMR--------GCRLEVEMAVSGQGLENLHRGLRRLEGRADSEEA------------VCAAAITALAHDGDALAVEAVTLFTTILARFSGDLALLTLARGGVYLAGGMTAH--LIDLVRGPAFRAAFEDKPPFSSIMAEIPMYLMPGGTPALDGISAYAANPHAFEVESAIH 343          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig66579.16141.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2P6TCB6_CHLSO4.370e-1628.68Endoglucanase n=1 Tax=Chlorella sorokiniana TaxID=... [more]
A0A0L0DLX5_THETB1.660e-1533.96Glucokinase n=1 Tax=Thecamonas trahens ATCC 50062 ... [more]
A0A2G1QLK4_9HYPH2.650e-1528.99Glucokinase n=1 Tax=Zhengella mangrovi TaxID=19820... [more]
A0A4Q9TJX9_9GAMM5.600e-1531.13Glucokinase n=7 Tax=Pseudoxanthomonas winnipegensi... [more]
UPI0018D1A40F9.830e-1530.48glucokinase n=1 Tax=Methylobrevis albus TaxID=2793... [more]
C0N6V2_9GAMM3.140e-1428.74Glucokinase n=2 Tax=Methylophaga thiooxydans TaxID... [more]
A0A1I4RRS8_9HYPH3.520e-1432.03Glucokinase n=5 Tax=Pleomorphomonas TaxID=261933 R... [more]
UPI0015EE69674.980e-1430.34glucokinase n=2 Tax=Pleomorphomonadaceae TaxID=284... [more]
A0A2P6VAW4_9CHLO5.400e-1428.40Glucokinase n=1 Tax=Micractinium conductrix TaxID=... [more]
A0A2E1Y190_9HYPH1.310e-1328.88Glucokinase n=1 Tax=Phyllobacteriaceae bacterium T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig66579contigM-pyrifera_M_contig66579:9..836 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score102.4
Seed ortholog evalue3.4e-19
Seed eggNOG ortholog43989.cce_0595
Preferred nameglk
KEGG rclassRC00002,RC00017
KEGG koko:K00845
KEGG ReactionR00299,R01600,R01786
KEGG Pathwayko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200
KEGG ModuleM00001,M00549
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004340,GO:0004396,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016052,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017144,GO:0018130,GO:0019200,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046835,GO:0046939,GO:0051156,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576
EggNOG free text desc.Belongs to the bacterial glucokinase family
EggNOG OGs1G1TJ@1117,3KHBA@43988,COG0837@1,COG0837@2
EC2.7.1.2
COG Functional cat.F
Best tax levelCyanothece
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons1
Model size828
Cds size828
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816556.268265-CDS-M-pyrifera_M_contig66579:8..8361622816556.268265-CDS-M-pyrifera_M_contig66579:8..836Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig66579 9..836 +
1692278044.7507343-CDS-M-pyrifera_M_contig66579:8..8361692278044.7507343-CDS-M-pyrifera_M_contig66579:8..836Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig66579 9..836 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig66579.16141.1prot_M-pyrifera_M_contig66579.16141.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig66579 9..836 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig66579.16141.1

>prot_M-pyrifera_M_contig66579.16141.1 ID=prot_M-pyrifera_M_contig66579.16141.1|Name=mRNA_M-pyrifera_M_contig66579.16141.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=276bp
MWVCTSKALEESGLAKRVVIINDFQAIGYALPVALRLDLATPFLTPPTPA
PRLPLTCLGPGTGLGACGVVRGSDGASLSICSESGMVEFAARSERELRLK
QHVAKELEAEERASGPHVTVEDIVSGTGLPRIFRFVKQEQEEKSGGEEGG
GEEKDGGGGLIGGAEVSRLAEEGDAVALEALSLFASVLTHELRRQALAFL
AYGGAVIAGGLIVHAPVRKAVREAIEKEFVSGDPVMGSILAKMPVYALKT
GDVGLLGARVKALQTLGRNVEEEIH*
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mRNA from alignment at M-pyrifera_M_contig66579:9..836+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig66579.16141.1 ID=mRNA_M-pyrifera_M_contig66579.16141.1|Name=mRNA_M-pyrifera_M_contig66579.16141.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=828bp|location=Sequence derived from alignment at M-pyrifera_M_contig66579:9..836+ (Macrocystis pyrifera P11B4 male)
ATGTGGGTGTGTACTTCAAAGGCGCTGGAAGAAAGTGGCCTAGCGAAGCG TGTGGTGATCATAAACGATTTCCAAGCAATTGGCTACGCTCTCCCCGTGG CTCTTCGCCTTGATCTCGCCACTCCCTTCCTCACTCCCCCCACGCCGGCT CCTCGACTACCCCTTACTTGTCTGGGCCCAGGAACGGGTCTGGGAGCGTG TGGGGTGGTGCGAGGAAGCGATGGCGCTTCTCTGTCGATTTGCAGCGAGA GTGGGATGGTTGAGTTTGCCGCGAGGAGCGAGAGGGAGCTGCGACTCAAG CAGCACGTGGCCAAGGAGCTGGAAGCCGAGGAAAGAGCCAGCGGGCCGCA TGTCACCGTCGAAGACATCGTCAGTGGCACAGGACTCCCTCGCATCTTTC GGTTCGTCAAGCAAGAACAAGAGGAAAAGAGTGGAGGAGAGGAAGGAGGT GGGGAGGAGAAGGATGGAGGTGGTGGGTTGATTGGGGGTGCTGAGGTGTC GCGGTTGGCTGAGGAAGGGGATGCAGTTGCATTGGAAGCACTGTCACTCT TTGCTTCGGTCTTGACACACGAGTTGAGGAGACAGGCATTGGCATTCTTG GCGTACGGTGGTGCTGTCATCGCAGGAGGGTTGATCGTGCATGCTCCAGT GCGAAAGGCAGTTCGAGAAGCAATTGAGAAGGAATTCGTCAGCGGAGATC CAGTGATGGGCAGTATTCTTGCAAAAATGCCCGTGTACGCGCTCAAGACT GGAGATGTCGGACTGCTGGGAGCTCGAGTCAAGGCACTCCAAACACTCGG AAGAAACGTAGAAGAAGAAATCCACTGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig66579:9..836+

>mRNA_M-pyrifera_M_contig66579.16141.1 ID=mRNA_M-pyrifera_M_contig66579.16141.1|Name=mRNA_M-pyrifera_M_contig66579.16141.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1656bp|location=Sequence derived from alignment at M-pyrifera_M_contig66579:9..836+ (Macrocystis pyrifera P11B4 male)
ATGTGGGTGTGTACTTCAAAGGCGCTGGAAGAAAGTGGCCTAGCGAAGCG
TGTGGTGATCATAAACGATTTCCAAGCAATTGGCTACGCTCTCCCCGTGG
CTCTTCGCCTTGATCTCGCCACTCCCTTCCTCACTCCCCCCACGCCGGCT
CCTCGACTACCCCTTACTTGTCTGGGCCCAGGAACGGGTCTGGGAGCGTG
TGGGGTGGTGCGAGGAAGCGATGGCGCTTCTCTGTCGATTTGCAGCGAGA
GTGGGATGGTTGAGTTTGCCGCGAGGAGCGAGAGGGAGCTGCGACTCAAG
CAGCACGTGGCCAAGGAGCTGGAAGCCGAGGAAAGAGCCAGCGGGCCGCA
TGTCACCGTCGAAGACATCGTCAGTGGCACAGGACTCCCTCGCATCTTTC
GGTTCGTCAAGCAAGAACAAGAGGAAAAGAGTGGAGGAGAGGAAGGAGGT
GGGGAGGAGAAGGATGGAGGTGGTGGGTTGATTGGGGGTGCTGAGGTGTC
GCGGTTGGCTGAGGAAGGGGATGCAGTTGCATTGGAAGCACTGTCACTCT
TTGCTTCGGTCTTGACACACGAGTTGAGGAGACAGGCATTGGCATTCTTG
GCGTACGGTGGTGCTGTCATCGCAGGAGGGTTGATCGTGCATGCTCCAGT
GCGAAAGGCAGTTCGAGAAGCAATTGAGAAGGAATTCGTCAGCGGAGATC
CAGTGATGGGCAGTATTCTTGCAAAAATGCCCGTGTACGCGCTCAAGACT
GGAGATGTCGGACTGCTGGGAGCTCGAGTCAAGGCACTCCAAACACTCGG
AAGAAACGTAGAAGAAGAAATCCACTGAATGTGGGTGTGTACTTCAAAGG
CGCTGGAAGAAAGTGGCCTAGCGAAGCGTGTGGTGATCATAAACGATTTC
CAAGCAATTGGCTACGCTCTCCCCGTGGCTCTTCGCCTTGATCTCGCCAC
TCCCTTCCTCACTCCCCCCACGCCGGCTCCTCGACTACCCCTTACTTGTC
TGGGCCCAGGAACGGGTCTGGGAGCGTGTGGGGTGGTGCGAGGAAGCGAT
GGCGCTTCTCTGTCGATTTGCAGCGAGAGTGGGATGGTTGAGTTTGCCGC
GAGGAGCGAGAGGGAGCTGCGACTCAAGCAGCACGTGGCCAAGGAGCTGG
AAGCCGAGGAAAGAGCCAGCGGGCCGCATGTCACCGTCGAAGACATCGTC
AGTGGCACAGGACTCCCTCGCATCTTTCGGTTCGTCAAGCAAGAACAAGA
GGAAAAGAGTGGAGGAGAGGAAGGAGGTGGGGAGGAGAAGGATGGAGGTG
GTGGGTTGATTGGGGGTGCTGAGGTGTCGCGGTTGGCTGAGGAAGGGGAT
GCAGTTGCATTGGAAGCACTGTCACTCTTTGCTTCGGTCTTGACACACGA
GTTGAGGAGACAGGCATTGGCATTCTTGGCGTACGGTGGTGCTGTCATCG
CAGGAGGGTTGATCGTGCATGCTCCAGTGCGAAAGGCAGTTCGAGAAGCA
ATTGAGAAGGAATTCGTCAGCGGAGATCCAGTGATGGGCAGTATTCTTGC
AAAAATGCCCGTGTACGCGCTCAAGACTGGAGATGTCGGACTGCTGGGAG
CTCGAGTCAAGGCACTCCAAACACTCGGAAGAAACGTAGAAGAAGAAATC
CACTGA
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