mRNA_M-pyrifera_M_contig6626.16081.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig6626.16081.1
Unique NamemRNA_M-pyrifera_M_contig6626.16081.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig6626.16081.1 vs. uniprot
Match: D7FUR1_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUR1_ECTSI)

HSP 1 Score: 319 bits (817), Expect = 7.650e-98
Identity = 187/296 (63.18%), Postives = 219/296 (73.99%), Query Frame = 1 
Query:  100 MRGMQLRSFDRACASGLRRLTVLSLSNNSLRDLDGFEHLVNLVELNLNFNAITSLHGLACPNLQRLYLSNNLITTTTGFT-AFPKLQTLCLFKNIVPDLVCALEPLR-SLAGLRELDLDGNPCAGSRGYKHRVIRCCLRLRELDGEEIVQLDRDLSSLFFEEEQKEIAWKIGGGVSPVSA-----TRPATAPA--MLRR--RAKRPLAASAAVEEXXXTETS-MGVGVAAQ----VGR-----GLLPLGNVRLLKSDRLNNDPQLLSYLAQGVIADPCGSPRDTIDSLRQEARARS 924
            MRGM+L SF+ +CA+ LR LTVLSLSNNSLRDL+ F  LVNLVE+N+NFNAITSLHGL CPNL+RLYLSNNLI +T  FT ++PKL+TLCLFKN++P+L  ALEPLR SLA LRELDLDGNPC+ SRGYKHRVIRCC RLRELDGEE+ QLDRDLS LFFEE++    W   GGV+          RPATAPA  + RR  R+K    + AA E     E     +G A Q    +G      G LP G  +LL+SDRLN DPQLLSYLAQGV+ADPCGSPRD ++SLR++A ARS
Sbjct:    1 MRGMRLTSFEPSCAARLRSLTVLSLSNNSLRDLESFRPLVNLVEVNVNFNAITSLHGLVCPNLRRLYLSNNLIASTERFTVSYPKLRTLCLFKNMLPNLASALEPLRRSLADLRELDLDGNPCSRSRGYKHRVIRCCPRLRELDGEELGQLDRDLSDLFFEEQRNNAVWDRMGGVNDDGEGSSRHCRPATAPATTVSRRWARSKGNNPSGAARENPKLLEEDGEDLGAALQGSLKLGELMDFAGCLPPGKTQLLRSDRLNKDPQLLSYLAQGVLADPCGSPRDAVESLRRKALARS 296
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BLAST of mRNA_M-pyrifera_M_contig6626.16081.1 vs. uniprot
Match: A0A6H5LCV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCV0_9PHAE)

HSP 1 Score: 312 bits (800), Expect = 7.100e-95
Identity = 187/344 (54.36%), Postives = 230/344 (66.86%), Query Frame = 1 
Query:   31 VIDESAVLDVTGENHLECVRQLIMRGMQLRSFDRACASGLRRLTVLSLSNNSLRDLDGFEHLVNLVELNLNFNAITSLHGLACPNLQRLYLSNNLITTTTGFT-AFPKLQTLCLFKNIVPDLVCALEPLRSLAGLRELDLDGNPCAGSRGYKHRVIRCCLRLRELDGEEIVQLDRDLSSLFFEEEQKEIAWKIGGGVSP-----VSATRPATAPA--MLRRRAKRP---LAASAAVEEXXXTETSMGVGVAAQVGRGL--------LPLGNVRLLKSDRLNNDPQLLSY---LAQ------------------------GVIADPCGSPRDTIDSLRQEARARS 924
            V+DE+A L  TG++ L  +RQLI+RGM+L SF+ +CA+ LR LTVLSLSNNSLRDL+ F  LVNLVE+N+NFNAITSL GL CPNL+RLYLSNN I +T   T ++PKL+TLCLFKN++P+L  ALEPLR L+ LRELDLDGNPC+ SRGYKHRVIRCC RLRELDGEE+ QLDRDLS LFFEE++ ++ W   GGV           RPATAPA  + RR A+R     + +A        E +  +G A Q    L        LP G  +LL+SDRLNNDPQ  SY   +A+                        GV+ADPCGSPRD ++SLR++A ARS
Sbjct:   42 VVDEAAALAATGDHRLGGIRQLIIRGMRLTSFEPSCAARLRSLTVLSLSNNSLRDLESFRPLVNLVEVNVNFNAITSLRGLVCPNLRRLYLSNNFIASTERLTVSYPKLRTLCLFKNMLPNLASALEPLRRLSDLRELDLDGNPCSRSRGYKHRVIRCCPRLRELDGEELGQLDRDLSDLFFEEQRNKVMWDRMGGVDDDREGSSRRHRPATAPATAVSRRWAQRKGNHPSGAARENSKLLEEDAEDLGAALQGSPKLGELMDFACLPPGKTQLLRSDRLNNDPQARSYPLFVAKHPADRRQAYGGSRVLLRCALDRNFGVLADPCGSPRDAVESLRRKALARS 385
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BLAST of mRNA_M-pyrifera_M_contig6626.16081.1 vs. uniprot
Match: A0A835YU35_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU35_9STRA)

HSP 1 Score: 186 bits (471), Expect = 9.350e-50
Identity = 118/278 (42.45%), Postives = 156/278 (56.12%), Query Frame = 1 
Query:   31 VIDESAVLDVTGENHLECVRQLIMRGMQLRSFDRACASGLRR-LTVLSLSNNSLRDLDGFEHLVNLVELNLNFNAITSLHGLACPNLQRLYLSNNLITTTTGFTA-FPKLQTLCLFKNIVPDLVCALEPLRSLAGLRELDLDGNPCAGSRGYKHRVIRCCLRLRELDGEEIVQLDRDLSSLFFEEEQKEIAWKIGGGVSPVSATRPATAPAMLRRRAKRPLAASAAVEEXXXTETSMGVGVAAQVGRGLLPLGNVRLLKSDRLNNDPQLLSYLAQGVI 858
            ++ E+  L+ TG++ LE + QLI+R   +   D ACA+ +   LT LSLSNNS+R L     LV L++LNLNFN++ SL GLACP L+RLYLSNN +T+  G  A  P+L TLCL+ N + D   AL PLR L  LRELDLDGNPC  +  Y+H  +R   RL  LDGE +  LD DLS+L+F E    +   + GG  P    RP+TAPA   R                X       G AA            RLL+ ++L+ +P +L YLAQ  +
Sbjct:   37 MLTEALALEATGDDCLETISQLILRSRGITGLDGACAARMATTLTTLSLSNNSIRSLTALSPLVALLDLNLNFNSVFSLQGLACPGLRRLYLSNNRLTSVAGVAAALPRLTTLCLYSNYLADRAAALAPLRQLPRLRELDLDGNPCCAAASYRHHAVRALPRLTLLDGEPVTPLDLDLSALYFAERGASV---VEGGGYPQQ--RPSTAPAAAFRPGXX------------XXXXXPQRGAAA------------RLLQCEQLDENPVVLDYLAQAAL 285
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BLAST of mRNA_M-pyrifera_M_contig6626.16081.1 vs. uniprot
Match: D0NFX6_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NFX6_PHYIT)

HSP 1 Score: 171 bits (434), Expect = 3.220e-45
Identity = 113/299 (37.79%), Postives = 152/299 (50.84%), Query Frame = 1 
Query:    4 MTTTRISRTVIDESAVLDVTGENHLECVRQLIMRGMQLRSFDRACASGLRRLTVLSLSNNSLRDLDGFEHLVNLVELNLNFNAITSLHGLACPNLQRLYLSNNLITTTTGFTAFPKLQTLCLFKNIVPDLVCALEPLRSLAGLRELDLDGNPCAGSR-GYKHRVIRCCLRLRELDGEEIVQLDRDLSSLFFEEEQKEIAWKIGGGVSPVSATRPATAPAMLRRRAKRPLAASAAVEEXXXTETSMGVGVAAQVGRGLLPLGNVRLLKSDRLNNDPQLLSYLAQGVIADPCGSPRDTIDS 897
            M T R S    D   V++  G   L  +++LI+R  +L   D  CA  L  L +LSLS+N L  LD F++LVNL+ELN+NFN I  L  L C  L++L+++N+ +   +      KL TL ++ N + DL  AL   RSL  L+ LDL GNPC+    GYK RV+R   RL++LDG+ I QLD+DL+  FF    K     I G +      RP TAPA                              A   G  L+P GNVRL + D LNN+P LL YL+Q   + P      T+ S
Sbjct:    1 MATPRTSTLTAD--VVMNRAGVYDLLALKELILRDEELTEVDETCAQSLASLEILSLSHNRLTSLDNFQYLVNLIELNVNFNQIERLDSLQCSGLEKLFIANSQVVDISPLRKLLKLNTLSVYGNRITDLDSALHTCRSLPRLQSLDLGGNPCSHDVVGYKFRVVRALSRLKKLDGDHITQLDKDLTEEFFATMHKSARPSINGFIG----ARPFTAPA------------------------------AGVRGSSLMPRGNVRLFRDDFLNNNPILLEYLSQDAGSAPVNEGNTTLSS 263
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BLAST of mRNA_M-pyrifera_M_contig6626.16081.1 vs. uniprot
Match: W2RD13_PHYPN (Uncharacterized protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2RD13_PHYPN)

HSP 1 Score: 170 bits (431), Expect = 1.150e-44
Identity = 113/287 (39.37%), Postives = 159/287 (55.40%), Query Frame = 1 
Query:   49 VLDVTGENHLECVRQLIMRGMQLRSFDRACASGLRRLTVLSLSNNSLRDLDGFEHLVNLVELNLNFNAITSLHGLACPNLQRLYLSNNLITTTTGFTAFPKLQTLCLFKNIVPDLVCALEPLRSLAGLRELDLDGNPCAGS-RGYKHRVIRCCLRLRELDGEEIVQLDRDLSSLFFEEEQKEIAWKIGGGVSPVSATRPATAPAMLRRRAKRPLAASAAVEEXXXTETSMGVGVAAQVGRGLLPLGNVRLLKSDRLNNDPQLLSYLAQ---GVIADPCGSPRDTIDS 897
            V++  G   L  +++LI+R  +L   D  CA  L  L +LSLS+N L  L+ F++LVNL+ELN+NFN I  L  L C  L++L+++NN I   +     P+L TL ++ N + DL  AL   RSL  LR LDL GNPC+    GYK RV++   RL+ LDG+ I QLD++L+  FF    +    +  G +      RP TAPA   R +   LAA+         ET++  G        L+P GNVRL + D LNN+P LL YL+Q   GV A    +   T++S
Sbjct:   21 VMNRAGVYDLVALKELILRDEELTHVDETCAQTLASLEILSLSHNRLASLEHFQYLVNLIELNVNFNQIERLDNLQCSGLEKLFIANNKIVDISPLRKLPELNTLSVYGNCITDLDSALHTCRSLPRLRSLDLGGNPCSRDVEGYKFRVVKALSRLKMLDGDHITQLDKELTEEFFASMHRGSKQRNNGFIG----ARPFTAPAAGVRGS---LAAT-------IPETTVSNGT-DPFASNLMPRGNVRLFRDDFLNNNPILLEYLSQDAGGVSASVENTSNSTLES 292
[Close]
BLAST of mRNA_M-pyrifera_M_contig6626.16081.1 vs. uniprot
Match: G4Z149_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4Z149_PHYSP)

HSP 1 Score: 166 bits (419), Expect = 5.470e-43
Identity = 108/267 (40.45%), Postives = 141/267 (52.81%), Query Frame = 1 
Query:   49 VLDVTGENHLECVRQLIMRGMQLRSFDRACASGLRRLTVLSLSNNSLRDLDGFEHLVNLVELNLNFNAITSLHGLACPNLQRLYLSNNLITTTTGFTAFPKLQTLCLFKNIVPDLVCALEPLRSLAGLRELDLDGNPCAGS-RGYKHRVIRCCLRLRELDGEEIVQLDRDLSSLFFEEEQKEIAWKIGGGVSPVSATRPATAPAMLRRRAKRPLAASAAVEEXXXTETSMGVGVAAQVGRGLLPLGNVRLLKSDRLNNDPQLLSYLA 846
            V++  G   L  +++LIMR  +L   D +CA  L  L +LSLS+N L  L  F+H VNL+ELN+NFN I +L  L C  L++L++SNN I   +      KL TL ++ N + D   AL   R L  LR LDL GNPC+    GYK RV+R   RL+ LDG+ I QLD+DL+  FF    K          +     RP TAPA    R  R       V     T  S+          GL+P GNVRL + D LNN+P LL Y+A
Sbjct:   14 VMNCAGVYDLLTLKELIMRDEELAQVDESCAQSLASLEILSLSHNHLTSLQHFQHFVNLIELNINFNQIKTLDNLQCAGLEKLFVSNNQIVDISPLQKLLKLNTLSVYGNRIADFDSALHICRGLPKLRSLDLGGNPCSRDVEGYKFRVVRVLSRLKTLDGDHITQLDKDLTEEFFASIHKNRQSN-----NRFIGARPYTAPAAPGARGGR-------VATGTLTPNSVD-----PFASGLMPRGNVRLFRDDFLNNNPILLEYMA 263
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BLAST of mRNA_M-pyrifera_M_contig6626.16081.1 vs. uniprot
Match: A0A225WYD8_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WYD8_9STRA)

HSP 1 Score: 164 bits (415), Expect = 2.050e-42
Identity = 106/265 (40.00%), Postives = 144/265 (54.34%), Query Frame = 1 
Query:   64 GENHLECVRQLIMRGMQLRSFDRACASGLRRLTVLSLSNNSLRDLDGFEHLVNLVELNLNFNAITSLHGLACPNLQRLYLSNNLITTTTGFTAFPKLQTLCLFKNIVPDLVCALEPLRSLAGLRELDLDGNPCAGSRG-YKHRVIRCCLRLRELDGEEIVQLDRDLSSLFFEEEQKEIAWKIGGGVSPVSATRPATAPAMLRRRAKRPLAASAAVEEXXXTETSMGVGVAAQVGRGLLPLGNVRLLKSDRLNNDPQLLSYLAQGV 855
            G   L  +++LI+R  +L   D  CA  L  L +LSLS+N L  L+ F++ VNL+E+NLNFN I +L  L C  L++L+++NN +   +      +L T+ ++ N + DL  AL   R L  LR LDL GNPC+   G YK RV+R   RL  LDG++I QLD+DL+  FF    K       G +     TRP TAPA   R       +  AV+     +T M   V       L+P GNVRL + D LNN P LL Y+AQG 
Sbjct:    5 GVYDLLTLKELILRDEELTQVDETCAQNLSSLEILSLSHNRLASLEYFQYFVNLIEINLNFNQIETLDNLQCAGLEKLFIANNQVVDMSPLRKLLRLNTISVYGNRIADLDSALHTCRGLPKLRSLDLGGNPCSRDVGEYKFRVVRALSRLDTLDGDQITQLDKDLTEEFFASIHKRSRQNSNGFIG----TRPFTAPAAGAR------GSLTAVKP----DTKMPNDV-DPFASNLMPRGNVRLFRDDFLNNSPILLEYMAQGA 254
[Close]
BLAST of mRNA_M-pyrifera_M_contig6626.16081.1 vs. uniprot
Match: T0RWJ6_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0RWJ6_SAPDV)

HSP 1 Score: 153 bits (387), Expect = 7.620e-39
Identity = 82/165 (49.70%), Postives = 103/165 (62.42%), Query Frame = 1 
Query:   64 GENHLECVRQLIMRGMQLRSFDRACASGLRRLTVLSLSNNSLRDLDGFEHLVNLVELNLNFNAITSLHGLACPNLQRLYLSNNLITTTTGFTAFPKLQTLCLFKNIVPDLVCALEPLRSLAGLRELDLDGNPCAGSRGYKHRVIRCCLRLRELDGEEIVQLDRDL 558
            G   L   ++LI+R   L   D ACA  L  L +LSLS+N+L  L GF HLVNLVELN+NFN +TSL  L C  LQ+LY +NN I +     AFPKL  + +F N + DL  AL   + L  L+ +DLDGNPCA   GYK+ V+R   RLR LDG+ +  LDRDL
Sbjct:   17 GLYDLGSTKELILRQEGLAEIDDACAQELSALELLSLSHNALTSLQGFAHLVNLVELNINFNQVTSLESLQCFGLQKLYAANNCIASLAPLRAFPKLSHISIFGNAILDLDAALHTCKHLLKLKSIDLDGNPCARLPGYKYHVLRALPRLRALDGDVVQALDRDL 181
[Close]
BLAST of mRNA_M-pyrifera_M_contig6626.16081.1 vs. uniprot
Match: A0A067CW58_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CW58_SAPPC)

HSP 1 Score: 152 bits (385), Expect = 1.730e-38
Identity = 82/165 (49.70%), Postives = 103/165 (62.42%), Query Frame = 1 
Query:   64 GENHLECVRQLIMRGMQLRSFDRACASGLRRLTVLSLSNNSLRDLDGFEHLVNLVELNLNFNAITSLHGLACPNLQRLYLSNNLITTTTGFTAFPKLQTLCLFKNIVPDLVCALEPLRSLAGLRELDLDGNPCAGSRGYKHRVIRCCLRLRELDGEEIVQLDRDL 558
            G   L   ++LI+R   L   D ACA  L  L +LSLS+N+L  L GF HLVNLVELN+NFN +TSL  L C  LQ+LY +NN I +     AFPKL  + +F N + DL  AL   + L  L+ +DLDGNPCA   GYK+ V+R   RLR LDG+ +  LDRDL
Sbjct:   17 GIYDLGSTKELILRQEGLAEVDDACAQELSALELLSLSHNALTSLHGFAHLVNLVELNINFNQVTSLESLQCFGLQKLYAANNCIASLAPLRAFPKLSHISVFGNAILDLDAALHTCKHLLKLKSIDLDGNPCARLHGYKYHVLRALPRLRALDGDVLQALDRDL 181
[Close]
BLAST of mRNA_M-pyrifera_M_contig6626.16081.1 vs. uniprot
Match: A0A6G0W9F8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W9F8_9STRA)

HSP 1 Score: 145 bits (366), Expect = 5.150e-36
Identity = 78/177 (44.07%), Postives = 110/177 (62.15%), Query Frame = 1 
Query:   28 TVIDESAVLDVTGENHLECVRQLIMRGMQLRSFDRACASGLRRLTVLSLSNNSLRDLDGFEHLVNLVELNLNFNAITSLHGLACPNLQRLYLSNNLITTTTGFTAFPKLQTLCLFKNIVPDLVCALEPLRSLAGLRELDLDGNPCAGSRGYKHRVIRCCLRLRELDGEEIVQLDRDL 558
            T +  S +L+  G   +   ++LI+R   +   +  CA  L  L +LSLS+N+LR L  FEHL NL+ELN+NFN + SL GL C  LQ+LY +NN +T+     AF KL  + ++ N + DL  AL   R L  LR +DLDGNPCA ++ YK++V+R   R+ ELDGE I  LDR++
Sbjct:    2 TRVTASLLLERAGIYEVLGTKELILRDEAIDELEETCAKDLVSLELLSLSHNALRTLTHFEHLTNLIELNINFNHVESLDGLQCYGLQKLYAANNKLTSIAPLRAFSKLVHVSVYGNELSDLDAALHTCRQLVKLRSVDLDGNPCARTKHYKYQVLRLLPRINELDGETIHALDREM 178
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig6626.16081.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUR1_ECTSI7.650e-9863.18Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5LCV0_9PHAE7.100e-9554.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YU35_9STRA9.350e-5042.45Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D0NFX6_PHYIT3.220e-4537.79Uncharacterized protein n=2 Tax=Phytophthora infes... [more]
W2RD13_PHYPN1.150e-4439.37Uncharacterized protein n=10 Tax=Phytophthora TaxI... [more]
G4Z149_PHYSP5.470e-4340.45Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]
A0A225WYD8_9STRA2.050e-4240.00Uncharacterized protein n=1 Tax=Phytophthora megak... [more]
T0RWJ6_SAPDV7.620e-3949.70Uncharacterized protein n=1 Tax=Saprolegnia diclin... [more]
A0A067CW58_SAPPC1.730e-3849.70Uncharacterized protein n=1 Tax=Saprolegnia parasi... [more]
A0A6G0W9F8_9STRA5.150e-3644.07Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig6626contigM-pyrifera_M_contig6626:125..6627 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score324.3
Seed ortholog evalue6.2e-86
Seed eggNOG ortholog2880.D7FUR1
Hectar predicted targeting categoryother localisation
EggNOG OGs2E022@1,2S7HV@2759
Ec32 ortholog descriptionHypothetical leucine rich repeat protein
Ec32 orthologEc-19_004250.1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons4
Model size945
Cds size942
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig6626.16081.1prot_M-pyrifera_M_contig6626.16081.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig6626 125..6624 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816552.4887247-CDS-M-pyrifera_M_contig6626:124..2411622816552.4887247-CDS-M-pyrifera_M_contig6626:124..241Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig6626 125..241 -
1692278042.5436027-CDS-M-pyrifera_M_contig6626:124..2411692278042.5436027-CDS-M-pyrifera_M_contig6626:124..241Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig6626 125..241 -
1622816552.5014298-CDS-M-pyrifera_M_contig6626:2669..30811622816552.5014298-CDS-M-pyrifera_M_contig6626:2669..3081Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig6626 2670..3081 -
1692278042.5553885-CDS-M-pyrifera_M_contig6626:2669..30811692278042.5553885-CDS-M-pyrifera_M_contig6626:2669..3081Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig6626 2670..3081 -
1622816552.5122468-CDS-M-pyrifera_M_contig6626:5254..55081622816552.5122468-CDS-M-pyrifera_M_contig6626:5254..5508Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig6626 5255..5508 -
1692278042.5653987-CDS-M-pyrifera_M_contig6626:5254..55081692278042.5653987-CDS-M-pyrifera_M_contig6626:5254..5508Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig6626 5255..5508 -
1622816552.522732-CDS-M-pyrifera_M_contig6626:6465..66241622816552.522732-CDS-M-pyrifera_M_contig6626:6465..6624Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig6626 6466..6624 -
1692278042.5754797-CDS-M-pyrifera_M_contig6626:6465..66241692278042.5754797-CDS-M-pyrifera_M_contig6626:6465..6624Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig6626 6466..6624 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816552.533379-UTR-M-pyrifera_M_contig6626:6624..66271622816552.533379-UTR-M-pyrifera_M_contig6626:6624..6627Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig6626 6625..6627 -
1692278042.5876837-UTR-M-pyrifera_M_contig6626:6624..66271692278042.5876837-UTR-M-pyrifera_M_contig6626:6624..6627Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig6626 6625..6627 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig6626.16081.1

>prot_M-pyrifera_M_contig6626.16081.1 ID=prot_M-pyrifera_M_contig6626.16081.1|Name=mRNA_M-pyrifera_M_contig6626.16081.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=314bp
MTTTRISRTVIDESAVLDVTGENHLECVRQLIMRGMQLRSFDRACASGLR
RLTVLSLSNNSLRDLDGFEHLVNLVELNLNFNAITSLHGLACPNLQRLYL
SNNLITTTTGFTAFPKLQTLCLFKNIVPDLVCALEPLRSLAGLRELDLDG
NPCAGSRGYKHRVIRCCLRLRELDGEEIVQLDRDLSSLFFEEEQKEIAWK
IGGGVSPVSATRPATAPAMLRRRAKRPLAASAAVEEEEDTETSMGVGVAA
QVGRGLLPLGNVRLLKSDRLNNDPQLLSYLAQGVIADPCGSPRDTIDSLR
QEARARSAASKPRS
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mRNA from alignment at M-pyrifera_M_contig6626:125..6627-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig6626.16081.1 ID=mRNA_M-pyrifera_M_contig6626.16081.1|Name=mRNA_M-pyrifera_M_contig6626.16081.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=6503bp|location=Sequence derived from alignment at M-pyrifera_M_contig6626:125..6627- (Macrocystis pyrifera P11B4 male)
ACCATGACGACGACAAGGATATCGAGGACGGTGATCGACGAGTCCGCCGT
GCTTGACGTCACTGGAGAGAACCACCTCGAGTGTGTTCGTCAGCTCATCA
TGAGGGGCATGCAGCTAAGATCGTTTGACCGTGCATGTGCAAGCGGGCTT
CGAAGGCTCACGGTGCGCGTGGGAAACGGCTGCTTGCTAAGATACTGCCG
TACAATTTCCCATCGATACTCGTACGTGTACGACGTATCTTGTGTGCACT
ACTCTGTGGTTGGTATATTTCGTCTTTCGACGGAGGTTGTGCCGCGCATT
GACTGATCGCAAAACTACGAACTGCCCTACCAAGTAGATATCAAGTATGT
TGCTCGTATGAGCAGGCTGTACGAAGGTGGTTAGCCTGTACGTGGCTTGA
GTGACTACAGGTGGGTAGAACTCTGTGTACGTATTTTTGTGGTCTGATCC
TCCCATCAACACCCAAAAATTGTGTTGATATTATTATGGCGGAGGCGCTG
GTCGACATACAGCTAGACGTACCTGGTGTACGTTATGATAGAAGGAACGA
AACTTATCGCTTTCAGTACTGCAGTCCCGTTTGGGGGACAAACTACTGAG
AATCTGGCTTATTTGTCCCTAAAACGGGACTGCAGTACTCAAAGGGTCAA
AATGCCAAAAACTCTTCCTATTCGAGGTACGTATGATACGATTAGACGGG
ATGGCAGGATGGTCAAAACGCCTGACGACGCACTTGCTGACTGAATTATT
CTTCCAAACATCGGACAGACCACCGATCCGCACTTCATGATCCGGAAACT
TCAGGGAAGATCAATCAGATTCACGTTCTGCATGATCTAGCCCATGTTGC
CGCGTGCGGGCCGTATAATCTGCATGGTCTACAGTTTTACGCGTCTCCTC
GGTTGGATCTGTACAAAGTTCATACAGATCCTTCACAACATCTCTAAACG
GCAGCTCAGGATATACGGTAGATCATTTACGTACTCGTAGATCGTGATCT
GTCAGGTGTGTGCATTGTTCACGAGCATTCGCAAGGAAATTGGGACAATT
TTGTGTAAGATTGAGCATAGTCTGCGCAACTGATTAACCCAACACCTACC
CACCCACACCCACGCGCAGGTTCTTTCTCTCTCTAACAACTCCCTGCGAG
ATCTTGATGGCTTCGAGCACCTGGTCAACCTCGTGGAGCTCAACTTGAAC
TTCAACGCCATAACCTCGCTGCATGGACTGGCTTGTCCGAACCTCCAGAG
GTTGTATCTTTCGAACAACCTTATCACAACTACAACGGGATTCACCGCGT
TCCCGAAGCTCCAGACCTTGTGCTTGTTCAAGAATATCGTCCCCGACCTC
GTCTGCGCTCTCGAGCCATTGCGGTAACTTTTTGTTCGTCACCATGACAA
TAACTGGAAGCGTTAGTAAGGAGGGTGTACATAGGGAGGTGTCGGTTAGT
CGTTTGTTGGTTCTGGTTCTTGCCTAGCGAAAGGGCTTGCATACTACCAA
CAGCCCTTACCGCATACATACTTGGTAGACCTACATTTTCGCAAATCGGG
CTCGGCTACCGCAGCGTTGCAGGTGCAATCAAAGAGAGGGTGTAGAGACA
TTCCAGTAGACCTCGTCCAGCAGTAAGTGCACGGTACGAGGGCAGAAGTA
CCATCGATGGCGAATAATACGAAATACTACCACGTACTGGCAGGCATTTT
CCAGGGCTGTTCACGGGTCGGGGCAAACCTCGCGGGTCAGGTCAGGTCGG
GTCGGGTCGGGCAAGGGTAACCCAACCCGATCCGAGATAGTTTGAAAACC
TCCTGACTCAACGTGACCCGAACGGACTCGCGATATTAAAAAAAAACTTC
CTGAGCCGACCCGCGGGCTGGGTCATGACCCGTGAGGATCGCTGGTATTG
TTATTTTGGTATAGCCGTGAACAAATGCATCAGAAGGTGTAACACTGCTT
GCCCTGAGAAAAGGTACCAAAATGTCGGCCCAGAGTCCCATCTTCCACTG
TTTCACCAACTTCTCACACCCGCACGGACTAAGGAAGACCAAACCGAGTG
AGACCCGCCAAACAGCACCCGTCGATATCGATTCGACCTGTCGGATGTAA
CGACGGTATATCTATGTGCCGCCTCGTCCAATTCCGGGCCTATAAGAGGG
TATCGCCTCCTTGCATTTTTTGTGTGAGATCTCGCAAGCACTATTCAGCG
TCGGACATATCAGGCCTTAGAGCTTGGGTCGCCCCCCCACCCACTCGACC
ACCTCATTCGTCGCTGTCCTTCATACGGCCATGCGTAACACGAGTATATT
TTTGTGTCAGCTTTCGCAATACTGTGCGTACCGCGGAAAAGAGGAAACGA
TCATTGACGTAGTTATGTGTGGGAATGGCATTTGCACTGTTGTGCATCTG
TACATTGACCCAGGAAGTATTTTAATAGAGCTGTGAGTTCGCTAGCAGTA
CTCGCCGCCGAATTTGTTATGAGTTGGCTACGTAGGCACTTACAGTTACT
GAGGGTAATTCCTTTCGATAATTTGCAAAAACGTTCTGCTTTTTGTTGTT
GTTGTTGTCTGGCTGGCGCGTTTGTTTGTGGCTTCGGGAATGTGTTTCTA
TGTCGAGAGAAAATACGCCCAGATTGCTGACAATTTTTTCCCGCCCAACG
AACGGCTATAGCCATCAAACCCAGCCAAGGCATTATGCCGTGCTCACATC
CCTGAAAAATGACACACCATACAATATAGCACGTTCGATAAGATAACACT
TCTTCTGTATCACACGGGTGATAAGCTACCACACTACCGTATCGCACGCA
TGATAAGATAACACCACCGTATCACACGGGGGATAAGATAACACCACCGT
ATCACACGGGTGATAAGATACCACTACCGTATCACACGGGTGATAAGATA
CCACCCTACCGTATCGTACGGGTGATAACATAACACCACCGGATCACACG
GGTGATAAGATACAACACTACCGTATCGCACGGGTGATAAGATCACACTA
CCGAATCACACGGGCTATAAGATAACACTATCGTATCACACGGGTTATAA
GATAACACTACCGTATCACACGGGCGATAAGATAACACTACCGTATCACA
TGGGTTATTAAGATAACACTCCGTATCACACGGGTGATAACATAACACTG
CCGTACCATACGAGTGATAACGTAACACCCCGTATCACACGGGTGGTAAG
ATATCACTAACGTGTCACACGGGCGATAAGATAACACTACCGTATCACAC
GGGTGATAACATAATACTACCGTATCACACGGGTGATAACATAACACTGC
CGTATCACATGGGTTATTAAGATAACACTACAGTAGTAGTATCACACGGG
TGATACATAACATACACCCTCGGACGGATTCCAACGCCGATTTTCTGGAC
AGAGGGGAGAGAGCAGAAGCTGTCCCGTAAAGCCAAAAAAATTCGTTGGG
TGTGCCCTCTCTGGTCTTGGAGGAAATCGGCTCTTAAATTATCCCCAGGG
GATGTCTCATCTTGGGTTTCTTCTGCTTCCGTTTCTCGGCCCGCAGGAGC
TTGGCAGGCTTGAGGGAGCTCGATCTAGACGGGAACCCTTGCGCCGGAAG
CCGCGGCTACAAACACCGCGTCATCCGATGCTGCCTGCGCCTGCGAGAGC
TCGACGGAGAGGAAATAGTGCAGCTCGACCGCGACCTGTCGTCTCTTTTT
TTCGAGGAGGAGCAAAAGGAAATCGCTTGGAAAATTGGCGGGGGGGTGTC
CCCAGTATCTGCGACGCGCCCAGCTACTGCTCCTGCAATGTTGAGGAGAC
GCGCGAAGCGACCACTTGCGGCGTCTGCCGCAGTAGAAGAAGAAGAGGAC
ACAGAGACAAGCATGGGTGTAGGCGTGGCGGCGCAAGTTGGACGCGGTCT
CCTGCCCCTGGGCAACGTGCGATTGCTCAAATCTGACCGGCTTAACAACG
ATCCCCAGGTGAAAAATTTACTGTCCACAACCCATACCAGGTACCAGATA
TCCACCTGTAAATACTATGATTAATTCGTGTTTTAGATAGCGTATCACAC
GGGCGATAGCGGATCACACGGGTGACAATATAGCACACCCCATGAGATTC
ATTTTCAGGGCTGATTCTCTCCAAAATACAGAATAAGGAAGGCGCACGCA
ACGAGAACGGCAGCTTTTGGGAAGAGCTCGTTGATATGTTCCCATAGACG
CGTCGTTTTTAAGTTTGCACTCTCTCCGTTTTCGAGAAAAACAGTTTTGA
AGTTCGTCCATCGGTGTGTGCTGTCTTGCGTGTTAGGCCGATATTGTCGG
AGTTGTTGTTCCTCCAATTTTTTATCCAACGTTTGTTTTTTATTTTTAAG
TTGTATCAAGGTACGGAGGCGTTCTGTCACCATTTGTGGAATTCTTCAGA
AGAAAAAATGACCGGAAAGTTATAGTTTCTATTTTCGGGAAAAAAAGCAA
CAGGAAAATCTGGAAGATAAAAAAGCAAATGTGCGAAAAAATCCCTCATA
CGCGAGGTAATCATATGTAAGTATTCGTCTCTGGATATTCACGTATACGA
TGTGGATGTTTATATACGAGAGCACGGCAAAAATGCGGAGTGAGCACGCA
ATGGTCCATTCTATCGGTCGTGCAAGTGTTGTAGATGCCGAGGTTTAGCT
ATTAATAGGTAACACAATGCGACTAGGCAGTACGGGACGTGTCCGACTAC
TGTGCAGGTTGGCTCTGGTTGCTCTTCACCACTCACTCGTGTTGGTACCA
TTTTATCTCTGCCTTGACCCTCCCGATGATTCTGAGGGGGAGGGCAAGTA
CACTTCTTTCATGAGGAAATAATATATAGTAACGCAATCACACCAATGCA
GGGGAAACGGGGATACCTTCACAATATAAACTATCGAAATTTGTGAGAGG
GGATGAGCCATGCCTGGACAGTGCTGTGCCTCTACAGTCCCCATGTCTCT
ACAGTGTGGTTCCTCTTGCATTGCGGTACCTCTACAGTGCGGTGGTAGGC
GAGTAGCTACCCAGGATATTTTGAGACCCCCAAAAAACTGTTTTACCTTT
TTTGTGCGTTCATCGTGGTAGCAAGTCCATCATTCTCAATAAGGGAACGA
GTACTGGGTGAGGTATTGGTGCCTCCTCTTGTAAGGAGCCTAAGACAAAA
CAGGCACCCCCACAGCAGCATGCCTCCTTCTACTCATACCTCGTATCAGT
TCTCCGGCAGTCCTTGCCCCCCCCCCACCCCCCTCCCTGACTCCAGCACT
CGTTCTCTTGCACCCAGCGGAATGGCATAATTCGGCAAGATACCGGTATG
CCGAACTTCGTGCAAAACCACGTTTCGGCCCTAACAGCCATGACGTTAAG
CAAGAAAAAAAAAAAAAAAGCGCGCGCGGCGCCGGTTTGCGCGTCGATAT
ATCAAACGTAACGGTTTTGAACGCACCAACTAGATGATGCGCGGTATACA
CATCGGGGGGGGGGGGGAATCTGAGCCACCACGGCGTCCTTACCGAGGGG
GCGGTAGTTGAAAGAAGGGGGTACAGTACCACAGTCAGTTCGTGGGGATA
GCTGTATGTATATACTTAAGGTGATATGAGTGGAGTACTCATGGGCTATG
GATATAGATAGTATGTTGCAGTATTGTAGTCTCACGAACACGAGAATAAT
CCGAAGAACGGATTAACCCGGCGGATTCTCCGTTAGTCGAGAGTAACGTT
CGTTTAGGAATGTCCCCTAGGGCGGATAACCCGTTGGACGAGAGTAATGT
TCCGCACCGCTTCACACTTAAGGTGCGCGCCCCACACACCCCAAGCCTGA
ATCAGTCGTATTCGTATGGTTTTCCCCGTTGAATTCCGCATTTTAATGGG
GGGGACAGGGCAGCCCCAGAAAAAGTAGGGTGAACCCCTATGGAAGAACG
CCTCTGGTGTGCGGTATGCACATGGCCAGATATTGTGGATAGATAGACGT
TTAAGCCTCTCGGGCCTTCAGACAGGGAGGGGGGGAATATGACGATAAAA
AAAAAGTGACGGTCGTAGCGGGTAGGGCCAGGGCGTGGTTGGGGCGTGAT
ACGAATTGGTGTCCGAAGACACAATGGTTGAATGCAAGGAGGCGTATAAG
GTACAGGCACGACACGATCCCACCCCTACATACTGCTGGGCACTCTCGCT
ATATACTCGTAGACGGTGGATATCACCAAAGTTTCCGACCATTCTTGTGT
CGCTATCTCGGGGCCCCAAAGGGACGAACCCGCGCTATATTGGAGCAGAC
TACTCTGAATTAGAGTTAGATTGAGATTTCAGTGCTGAGAGGGTTAACCT
CCTGGCCTTCCCCCCCCCCCGCTTCCCTTCGACGAACCACCTCCTTTTCG
TGACTTTTTTCGCCGGCCGGGCTCGTAACGGCAAAGCTCCTGAGTTACTT
GGCTCAAGGAGTTATTGCCGACCCTTGCGGCTCGCCTCGAGACACGATCG
ACAGCCTGAGACAGGAAGCGCGCGCTCGGTCGGCGGCGAGCAAACCGCGA
AGC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig6626:125..6627-

>mRNA_M-pyrifera_M_contig6626.16081.1 ID=mRNA_M-pyrifera_M_contig6626.16081.1|Name=mRNA_M-pyrifera_M_contig6626.16081.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1884bp|location=Sequence derived from alignment at M-pyrifera_M_contig6626:125..6627- (Macrocystis pyrifera P11B4 male)
ATGACGACGACAAGGATATCGAGGACGGTGATCGACGAGTCCGCCGTGCT
TGACGTCACTGGAGAGAACCACCTCGAGTGTGTTCGTCAGCTCATCATGA
GGGGCATGCAGCTAAGATCGTTTGACCGTGCATGTGCAAGCGGGCTTCGA
AGGCTCACGATGACGACGACAAGGATATCGAGGACGGTGATCGACGAGTC
CGCCGTGCTTGACGTCACTGGAGAGAACCACCTCGAGTGTGTTCGTCAGC
TCATCATGAGGGGCATGCAGCTAAGATCGTTTGACCGTGCATGTGCAAGC
GGGCTTCGAAGGCTCACGGTTCTTTCTCTCTCTAACAACTCCCTGCGAGA
TCTTGATGGCTTCGAGCACCTGGTCAACCTCGTGGAGCTCAACTTGAACT
TCAACGCCATAACCTCGCTGCATGGACTGGCTTGTCCGAACCTCCAGAGG
TTGTATCTTTCGAACAACCTTATCACAACTACAACGGGATTCACCGCGTT
CCCGAAGCTCCAGACCTTGTGCTTGTTCAAGAATATCGTCCCCGACCTCG
TCTGCGCTCTCGAGCCATTGCGGTTCTTTCTCTCTCTAACAACTCCCTGC
GAGATCTTGATGGCTTCGAGCACCTGGTCAACCTCGTGGAGCTCAACTTG
AACTTCAACGCCATAACCTCGCTGCATGGACTGGCTTGTCCGAACCTCCA
GAGGTTGTATCTTTCGAACAACCTTATCACAACTACAACGGGATTCACCG
CGTTCCCGAAGCTCCAGACCTTGTGCTTGTTCAAGAATATCGTCCCCGAC
CTCGTCTGCGCTCTCGAGCCATTGCGGAGCTTGGCAGGCTTGAGGGAGCT
CGATCTAGACGGGAACCCTTGCGCCGGAAGCCGCGGCTACAAACACCGCG
TCATCCGATGCTGCCTGCGCCTGCGAGAGCTCGACGGAGAGGAAATAGTG
CAGCTCGACCGCGACCTGTCGTCTCTTTTTTTCGAGGAGGAGCAAAAGGA
AATCGCTTGGAAAATTGGCGGGGGGGTGTCCCCAGTATCTGCGACGCGCC
CAGCTACTGCTCCTGCAATGTTGAGGAGACGCGCGAAGCGACCACTTGCG
GCGTCTGCCGCAGTAGAAGAAGAAGAGGACACAGAGACAAGCATGGGTGT
AGGCGTGGCGGCGCAAGTTGGACGCGGTCTCCTGCCCCTGGGCAACGTGC
GATTGCTCAAATCTGACCGGCTTAACAACGATCCCCAGGAGCTTGGCAGG
CTTGAGGGAGCTCGATCTAGACGGGAACCCTTGCGCCGGAAGCCGCGGCT
ACAAACACCGCGTCATCCGATGCTGCCTGCGCCTGCGAGAGCTCGACGGA
GAGGAAATAGTGCAGCTCGACCGCGACCTGTCGTCTCTTTTTTTCGAGGA
GGAGCAAAAGGAAATCGCTTGGAAAATTGGCGGGGGGGTGTCCCCAGTAT
CTGCGACGCGCCCAGCTACTGCTCCTGCAATGTTGAGGAGACGCGCGAAG
CGACCACTTGCGGCGTCTGCCGCAGTAGAAGAAGAAGAGGACACAGAGAC
AAGCATGGGTGTAGGCGTGGCGGCGCAAGTTGGACGCGGTCTCCTGCCCC
TGGGCAACGTGCGATTGCTCAAATCTGACCGGCTTAACAACGATCCCCAG
CTCCTGAGTTACTTGGCTCAAGGAGTTATTGCCGACCCTTGCGGCTCGCC
TCGAGACACGATCGACAGCCTGAGACAGGAAGCGCGCGCTCGGTCGGCGG
CGAGCAAACCGCGAAGCCTCCTGAGTTACTTGGCTCAAGGAGTTATTGCC
GACCCTTGCGGCTCGCCTCGAGACACGATCGACAGCCTGAGACAGGAAGC
GCGCGCTCGGTCGGCGGCGAGCAAACCGCGAAGC
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