mRNA_M-pyrifera_M_contig66106.16050.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig66106.16050.1
Unique NamemRNA_M-pyrifera_M_contig66106.16050.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig66106.16050.1 vs. uniprot
Match: A0A6H5L6Q6_9PHAE (Calx-beta domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6Q6_9PHAE)

HSP 1 Score: 340 bits (873), Expect = 1.210e-102
Identity = 184/331 (55.59%), Postives = 233/331 (70.39%), Query Frame = 1
Query:    1 VTLGSYIAGAEGSANVSFTISNPLPIDGHVVIEFPSNFTSINVTAVTVAGVDGGFNVSVGGDGYTVDVHRDGTGTEVEAGTNITATVVDGVTNQLFEGSSDVFPVVKTTLKDSTVSINEASSGVNSNDRAAAVVFTPGAFAVPPTVVLGSSVAGVEGAANLSFTTANPLPADGHVIIKFPSSFTAINSRAARATGIDGSFIVSVGADGF-TVDVWRDGSGTEVGSGVNVSVMLLDGVVNEQFEGPSDVFPMVKTTLAETDVSVDEASADFHDADRPAPAWFTPGVFAE-RPRVTLGSYIAGAEGSANISFTISNPLPIDGHVVIEFPSNFT 987
            V L +Y AG  G+ANVSF  SNP+P DGHV+I FPSN TS++ +    +G+DGG   +V   GYTVDV RDG G+ VE+G  ++ ++VD V NQLFEG SD FPV+KTTL D+++S++EASS  NS DR A V FTPGAF+ PPTV L S VAG EG AN++   +NPLPADG++ I+FPS F++IN     ATGIDG   V V +D F TV V R G+G  V +G +VS+ L+DG+ N+ FEG S  FP VKTTLA+ DV++DE SA+F+  D P    FTPG FA   P V L +Y AG  G+AN+SF  SNP+P DGHV+I FPSNFT
Sbjct:   50 VVLSTYAAGEVGTANVSFITSNPIPSDGHVIITFPSNVTSVDCSVALASGMDGGLVSNV--SGYTVDVERDGFGSPVESGAEVSVSLVDCVKNQLFEGESDSFPVLKTTLNDTSISVDEASSAHNSEDRPAGVSFTPGAFSEPPTVELDSLVAGHEGGANVTVALSNPLPADGNIFIEFPSEFSSINCSQVVATGIDGGVEVYVASDAFHTVRVHRAGNGGVVEAGASVSLALVDGITNQLFEGVSASFPSVKTTLADVDVAIDETSAEFNTPDLPPGVTFTPGAFAGVGPTVVLSTYAAGEVGTANVSFITSNPIPSDGHVIITFPSNFT 378          
BLAST of mRNA_M-pyrifera_M_contig66106.16050.1 vs. uniprot
Match: D7G5B0_ECTSI (Laminin IV type A domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5B0_ECTSI)

HSP 1 Score: 302 bits (773), Expect = 3.120e-89
Identity = 184/445 (41.35%), Postives = 233/445 (52.36%), Query Frame = 1
Query:    1 VTLGSYIAGAEGSANVSFTISNPLPIDGHVVIEFPSNFTSINVTAVTVAGVDGGFNVSVGGDGYTVDVHRDGTGTEVEAGTNITATVVDGVTNQLFEGSSDVFPVVKTTLKDSTVSINEASSGVNSNDRAAAVVFTPGAFAVPPTVVLGSSVAGVEGAANLSFTTANPLPADGHVIIKFPSSFTAINSRAARATGIDGSFIVSVGAD--------------------------------------------------------------------------------------------------------------------GFTVDVWRDGSGTEVGSGVNVSVMLLDGVVNEQFEGPSDVFPMVKTTLAETDVSVDEASADFHDADRPAPAWFTPGVFAERPRVTLGSYIAGAEGSANISFTISNPLPIDGHVVIEFPSNFT 987
            V L +Y AG  G+AN+SF  SNP+P DGHV+I FPSNFTS++ +    +G+DGG   +V   GYTVDV RDG G+ VE GT ++ ++VD V NQLFEG SD FPV+KTTL D+ + ++EASS   S DR A V+FTPGAF+ PPTV L S VAG EG AN++   +NPLPADG++ I+FPS F+ IN     ATGIDG   V V +D                                                                                                                    G+TVDV RDG G+ V  G  VSV L+D V N+ FEG SD FP++KTTL +T +SVDEAS+  +  DRPA   FTPG F+E P V L S +AG EG AN++  +SNPLP DG++ IEFPS F+
Sbjct:  630 VVLSTYAAGEVGTANISFITSNPIPSDGHVIITFPSNFTSVDCSVALASGMDGGLVSNV--SGYTVDVERDGFGSAVEPGTEVSVSLVDCVKNQLFEGESDSFPVLKTTLNDTGIPVDEASSAQTSEDRPAGVLFTPGAFSEPPTVELDSLVAGHEGGANVTLALSNPLPADGNIFIEFPSEFSPINCSQVVATGIDGGLEVYVASDAVHTLFEGMSASFPSVKTTLTDVDVAIDETSAEFNTPDRRPGVTFTPGAFAGVGPTVVLSTYAAGEVGTANISFITLNPIPSDGHVIITFPSNFTSVDCSVALASGMDGGLVSNVSGYTVDVERDGFGSAVEPGTEVSVSLVDCVKNQLFEGESDSFPVLKTTLNDTGISVDEASSAHNSEDRPAAVLFTPGAFSEPPTVELDSLVAGHEGGANVTLALSNPLPADGNIFIEFPSEFS 1072          
BLAST of mRNA_M-pyrifera_M_contig66106.16050.1 vs. uniprot
Match: A0A2D6N2R1_9CHLR (Uncharacterized protein n=1 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A2D6N2R1_9CHLR)

HSP 1 Score: 161 bits (407), Expect = 2.030e-40
Identity = 120/329 (36.47%), Postives = 169/329 (51.37%), Query Frame = 1
Query:    1 VTLGSYIAGAEGSANVSFTISNPLPIDGHVVIEFPSNFTSINVTAVTVAGVDGGFNVSVGGDGYTVDVHRDGTGTEVEAGTNITATVVDGVTNQLFEGSSDVFPVVKTTLKDSTVSINEASSGVNSNDRAAAVVFTPGAFAVPPTVVLGSSVAGVEGAANLSFTTANPLPADGHVIIKFPSSFTAINSRAARATGIDGSFIVSVGADGFTVDVWRDGSGTEVGSGVNVSVMLLDGVVNEQFEGPSDVFPMVKTTLAETDVSVDEASADFHDADRPAPAWFTPGVFAERPRVTLGSYIAGAEGSANISFTISNPLPIDGHVVIEFPSNFT 987
            VT  S  + A G+ + SFTI+NP+P DG V I FPS F+   V++ T + + GGF  SV   G TV V RD TG++V A T ++ T+   V N +  GS+  +          TV+   +S G      AA+   T G+ +   TV   S VAGV  +  +SFTTANPLPA+G V + FPS F+     +A ++ + G    SV   G TV V RD +G++V +   VS+ L   V N    G +  F +   T   T  S+D A+        PA +  T G  +           AGA G+  ++FTI+NPLP DG V + FPS F+
Sbjct:  203 VTPASLASNATGNVSASFTIANPIPADGRVEIVFPSGFSLTGVSSATSSTIGGGFTTSV--SGRTVTVQRDNTGSQVAASTAVSLTLAS-VQNPVVPGSTGTY----------TVTTQNSSGGGIDTVIAASNTITTGSLS-STTVAPASLVAGVTSSVTVSFTTANPLPANGRVEVVFPSGFSLTGLSSATSSTVGGGLTASV--SGQTVTVQRDNTGSQVAASTAVSLTLAS-VQNPAVSGSTGTFTLA--TQDSTGTSIDTAT--------PASSTITTGSLSSXXXXXXXXX-AGASGTVTLTFTIANPLPADGRVQVTFPSGFS 503          
BLAST of mRNA_M-pyrifera_M_contig66106.16050.1 vs. uniprot
Match: A0A835YKP8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKP8_9STRA)

HSP 1 Score: 160 bits (406), Expect = 3.280e-40
Identity = 113/333 (33.93%), Postives = 173/333 (51.95%), Query Frame = 1
Query:    1 VTLGSYIAGAEGSANVSFTISNPLPIDGHVVIEFPSNFTSINVTAVTVAG-VDGGFNVSVGGD----GYTVDVHRDGTGTEVEAGTNITATVVDGVTNQLFEGSSDVFPVVKTTLKDSTVSINEASSGVNSNDRAAAVVFTPGAFAVPPTVVLGSSVAGVEGAANLSFTTANPLPADGHVIIKFPSSFTAINSRAARATGIDGSFIVSVGADGFTVDVWRDGSGTEVGSGVNVSVMLLDGVVNEQFEGPSDVFPMVKTTLAETDVSVDEASADFHDADRPAPAWFTPGVFAERPRVTLGSYIAGAEGSANISFTISNPLPIDGHVVIEFPSNF 984
            + L S +AGA  +A V+  +SNPLP D  + + FP +F ++    +T++G VDGG  V+   D      TV+V R G     E  T      +DG+ NQ FEG S V     T L D    I+              V+FTP  + V P V L + VAG  G A ++F    PLPA+G ++I+FPS+F A+    A +  +DG  +++    G TV V RD SGTE+G G  +S+ L  GV N+++E PS  FP+++T L++   +++++SA    +                  VTL   +AG E  A ++FT++N +P   HV +  P++F
Sbjct:  495 LALSSALAGASVTAAVTLQLSNPLPTDARIFLGFPPSFYAVAPATITLSGSVDGGAAVAWTEDPASAAVTVEVARAGVTAVPELST--VTLELDGIVNQRFEGWSGVVQCW-TMLADGVRDIDRGDGNE--------VLFTPSDWQVDPVVTLNTYVAGETGGATITFMPRIPLPANGTIVIEFPSTFVAVACTEAVSAQLDG--LLTAVTSGHTVTVARDESGTEMGMGTLISIYLPSGVSNQRYEAPSGAFPLIRTALSDGVTAIEQSSAAADASAXXXXXXXXXXXXXVDAVVTLQYTVAGLETQATVTFTLANVMPAAAHVEVVPPADF 814          
BLAST of mRNA_M-pyrifera_M_contig66106.16050.1 vs. uniprot
Match: A0A2D6N2H7_9CHLR (Uncharacterized protein (Fragment) n=1 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A2D6N2H7_9CHLR)

HSP 1 Score: 143 bits (360), Expect = 1.480e-34
Identity = 114/332 (34.34%), Postives = 167/332 (50.30%), Query Frame = 1
Query:    1 VTLGSYIAGAEGSANVSFTISNPLPIDGHVVIEFPSNFTSINVTAVTVAGVDGGFNVSVGGDGYTVDVHRDGTGTEVEAGTNITATVVDGVTNQLFEGSSDVFPVVKTTLKDSTVSINEASSGVNSNDRAAAVVFTPGAFAVPPTVVLGSSVAGVEGAANLSFTTANPLPADGHVIIKFPSSFT--AINSRAARA-TGIDGSFIVSVGADGFTVDVWRDGSGTEVGSGVNVSVMLLDGVVNEQFEGPSDVFPMVKTTLAETDVSVDEASADFHDADRPAPAWFTPGVFAERPRVTLGSYIAG-AEGSANISFTISNPLPIDGHVVIEFPSNF 984
            VT  S +AGA G+  VSFT  NP+P DG + I FPS F+   V + T + + GG   SV     TV V RD TG++V A   ++ T+   V N +  GS+  + V  TT   S  SI+ A+   N+         T GA       +  ++ +  + AA  SFTTANPLPADG +++ FPS F+  AI+ + A   +G+DG+   SV   G T+ + R G GT++ +G  +S  +L  + N    G +  F +     + T++          DA   A      G     P V+L S  AG +E +A + FT  NPLP +G +V+  PS F
Sbjct:  185 VTPASLVAGATGNVAVSFTTDNPIPADGRMEIAFPSGFSLTGVNSATSSTIGGGLTASV--SSQTVTVQRDNTGSQVAADAAVSLTLAT-VQNPVVSGSTGTYTV--TTQDSSGASIDTATPAANT--------ITTGALTRASLSLSTTAPSQDDAAATFSFTTANPLPADGKIVLVFPSGFSLSAISGQTATGLSGVDGTLTASV--SGSTLTLTRSG-GTQLAAGTALS-FVLSSLQNPTTSGTTSTFSVTTENSSSTEI----------DAATLAGQTIAVGALTS-PEVSLSSTTAGRSEVAATVVFTTVNPLPANGRIVVTLPSGF 488          
BLAST of mRNA_M-pyrifera_M_contig66106.16050.1 vs. uniprot
Match: A0A496RNW1_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Candidatus Omnitrophica bacterium TaxID=2035772 RepID=A0A496RNW1_9BACT)

HSP 1 Score: 105 bits (263), Expect = 1.640e-21
Identity = 97/334 (29.04%), Postives = 156/334 (46.71%), Query Frame = 1
Query:    1 VTLGSYIAGAEGSANVSFTISNPLPIDGHVVIEFPSNFTSINVTAVTVAGVDGGFNVSVGGDGYTVDVHRDGTGTEVEAGTNITATVVDGVTNQLFEGSSDVFPVVKTTLKDSTVSINEASSGVNSNDRAAAVVFTPGAFAVPPTVVLGSSVAGVEGAANLSFTTANPLPADGHVIIKFPSS------FTAINSRAARATGIDGSFIVSVGADGFTVDVWRDGSGTEVGSGVNVSVMLLDGVVNEQFEGPSDVFPMVKTTLAETDVSVDEASADFHDADRPAPAWFTPGVFAERPRVTLGSYIAGAEGSANISFTISNPLPIDGHVVIEFPSNF 984
            VT  SY AGA  +  ++FT  N +P++G V + F S F   ++++      + G +VSV     T+++     GT+V A   ++  V+ G+ N    GS+  + +     +D  +    AS+             T GA +    V   S  AG  G   +SFTTANP+PA G +++ FP+S      F +  + AA +  +DG+  +SVG     + + R G G E  +G     + L  + N    G +  +  +KTT A ++  +DE S+   D         T G     P VT  SY+AGA  +  I+FT +N +  +G V + F S F
Sbjct:  107 VTHASYAAGAASNTTIAFTTVNAVPVNGDVQVTFGSGF---DISSAAYVSGNTGASVSVNSQVLTINL-----GTQVSAAEAVSI-VISGIINPAVTGSTGTYAIETQDAEDIAIDTGTASANT----------ITVGALS-STNVEPASLAAGASGNVTVSFTTANPIPATGKIVVTFPTSLDSGFSFNSGGTSAATSATMDGT--LSVGIASNVITLTRSG-GAEQAAGAET--ITLTYIKNPALTGSTGAY-QIKTTNA-SNADIDEDSSVGADT-------ITTGSLTS-PTVTHASYLAGATSNTTIAFTTANAVEQNGDVQVTFGSGF 405          
BLAST of mRNA_M-pyrifera_M_contig66106.16050.1 vs. uniprot
Match: A0A410P3E8_9BACT (Uncharacterized protein n=1 Tax=Candidatus Velamenicoccus archaeovorus TaxID=1930593 RepID=A0A410P3E8_9BACT)

HSP 1 Score: 94.7 bits (234), Expect = 1.280e-17
Identity = 75/218 (34.40%), Postives = 105/218 (48.17%), Query Frame = 1
Query:   19 IAGAEGSANVSFTISNPLPIDGHVVIEFPSNFTSINVTAVTVA---GVDGGFNVSVGGDGYTVDVHRDGTGTEVEAGTNITATVVDGVTNQLFEGSSDVFPVVKTTLKDSTVSINEASSGV--NSNDRAAAVVFTPGAFAVPPTVVLGSSVAGVEGAANLSFTTANPLPADGHVIIKFPSSFTAINSRAARATG--IDGSFIVSVGADGFTVDVWRDG 651
            +AG  G+  VSFT +NPL  DG + + FP+ F+  +  A  V+   G+DG F+V V G   TV   R G  + V    +IT T +    N    GS+  + +             + +SGV  +S++  +A   T G       V   S  AG  G   +SFTT NP+PADG + + FPS F   N     AT   +DGSF VS+  +G  V V R G
Sbjct:  512 VAGITGTVTVSFTTANPLSSDGKIKVTFPAGFSFSSGGATVVSSSSGIDGSFSVGVAGQAITVT--RSGGSSSVPGAKSITLTNIKNPDNT---GSTGTYAIE-----------TQNASGVVFDSDNSVSADTITNGGTLTSTNVEPASLYAGASGNVTVSFTTVNPIPADGKIEVTFPSGFVISNGGTTAATSGSMDGSFAVSI--NGQVVTVTRSG 711          
BLAST of mRNA_M-pyrifera_M_contig66106.16050.1 vs. uniprot
Match: A0A432JG40_9CHLR (Uncharacterized protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A432JG40_9CHLR)

HSP 1 Score: 92.8 bits (229), Expect = 1.590e-17
Identity = 87/266 (32.71%), Postives = 124/266 (46.62%), Query Frame = 1
Query:   34 GSANVSFTISNPLPIDGHVVIEFPSNFTSINVTAVTVAGVDGGF---NVSVGGDGYTVDVHRDGTGTEVEAGTNITATVVDGVTNQLFEGSSDVFPVVKTTLKDSTVSINEASSGVNSNDRAAAVVFTPGAFAVPPTVVLGSSVAGVEGAANLSFTTANPLPADGHVIIKFPSSFTAINSRAARATGIDGSFIVSVGADGFTVDVWRDGS-------GTEVGSGVNVSVMLLDGVVNEQFEGPSDVFPMVKTTLAETDVSVDEASA 801
            G   V+F IS+PLP DG + I FPS F  +N  + T  G DG       SV   G    + R G G  ++A T +T T+   + N    GSS  + +  TT  D+T+ ++ A   V  +      + TPG       V   S VA   G   +SFTTANPLP +G ++I FPS F  I S      G DG  I     DG T  V  + S       G+ V +   V  ++L+G+ N    GP+  + +   T A   V +D+A++
Sbjct:    2 GDVGVTFIISDPLPTDGKIAITFPSGFR-LNSGSATAMGDDGASFDGTTSVSVSGQIATITRVGDGDSIDADTVVTLTLTS-IKNPPVSGSSKSYIIKTTTSLDTTLDVDTA---VRPD------IITPGVLGFTD-VEPASLVAKAVGRVTVSFTTANPLPGNGDIVITFPSGFGLIGSEVMSLAG-DGPSI-----DGMTTVVLSEHSVIISRLEGSLVEADTKV-FLVLNGIKNPPVSGPTGTYSVKTKTSA--GVPIDQATS 246          
BLAST of mRNA_M-pyrifera_M_contig66106.16050.1 vs. uniprot
Match: A0A2A5FEC8_9CHLR (Uncharacterized protein n=5 Tax=Chloroflexi TaxID=200795 RepID=A0A2A5FEC8_9CHLR)

HSP 1 Score: 90.5 bits (223), Expect = 1.580e-16
Identity = 86/262 (32.82%), Postives = 123/262 (46.95%), Query Frame = 1
Query:   46 VSFTISNPLPIDGHVVIEFPSNFTSINVTAVTVAGVDGGF---NVSVGGDGYTVDVHRDGTGTEVEAGTNITATVVDGVTNQLFEGSSDVFPVVKTTLKDSTVSINEASSGVNSNDRAAAVVFTPGAFAVPPTVVLGSSVAGVEGAANLSFTTANPLPADGHVIIKFPSSFTAINSRAARATGIDGSFIVSVGADGFTVDVWRDGS-------GTEVGSGVNVSVMLLDGVVNEQFEGPSDVFPMVKTTLAETDVSVDEASA 801
            V+F IS+PLP DG + I FPS F  +N  + T  G DG       SV   G    + R G G  ++A T +T T+   + N    GSS  + +  TT  D+T+ ++ A   V  +      + TPG       V   S VA   G   +SFTTANPLP +G ++I FPS F  I S      G DG  I     DG T  V  + S       G+ V +   V  ++L+G+ N    GP+  + +   T A   V +D+A++
Sbjct:    3 VTFIISDPLPTDGKIAITFPSGFR-LNSGSATAMGDDGASFDGTTSVSVSGQIATITRVGDGDSIDADTVVTLTLTS-IKNPPVSGSSKSYIIKTTTSLDTTLDVDTA---VRPD------IITPGVLGFTD-VEPASLVAKAVGRVTVSFTTANPLPGNGDIVITFPSGFGLIGSEVMSLAG-DGPSI-----DGMTTVVLSEHSVIISRLEGSLVEADTKV-FLVLNGIKNPPVSGPTGTYSVKTKTSA--GVPIDQATS 243          
BLAST of mRNA_M-pyrifera_M_contig66106.16050.1 vs. uniprot
Match: A0A2N1PPW2_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Candidatus Wallbacteria bacterium HGW-Wallbacteria-1 TaxID=2013854 RepID=A0A2N1PPW2_9BACT)

HSP 1 Score: 74.3 bits (181), Expect = 7.580e-11
Identity = 86/326 (26.38%), Postives = 142/326 (43.56%), Query Frame = 1
Query:   22 AGAEGSANVSFTISNPLPIDGHVVIEFPSNFTSINVTAVTVAGVDGGFNV---SVGGDGYTVDVHRDGTGTEVEAGTNITATVVDGVTNQLFEGSSDVFPVVKTTLKDSTVSINEASSGVNSNDRAAAVVFTPGAFAVPPTVVLGSSVAGVEGAANLSFTTANPLPADGHVIIKFPSSFTAINSRAARATGIDGSFIVS-VGADGFTVDVWRDGSGTEVGSGVNVSVMLLDGVVNEQFEGPSDVFPMVKTTL-AETDVSVDEASADFHDADRPAPAWFTPGVFAERPRVTLGSYIAGAEGSANISFTISNPLPIDGHVVIEFPSNF 984
            AG      V+F ++N LP +G +V+EFP  +  I+  A+    +  G N    S+G  G  + + R G G ++ AG  +     D V N    G S  F V  T+     + ++    G+    +A++V  T  + AV P  + G  V G  G   ++F T+  +PAD  + I   + F       A  TGI+G+  +S VG     V V +  +G+   +G  V++++  GV N      +   P  +  +    D  V+  S+         PA  T G  +    V L S +     +A IS    + +P DG + + FP+ F
Sbjct:  990 AGVGQQYQVTFFVTNTLPKNGIIVLEFPQGY-DISRAALGAFAISPGLNFGGGSIGRSGTILSMIRAGDGDDIPAGNGLQLVFTD-VVNPPAVGGSGSFTVRTTSSAGDEIDVSHPIPGIPI--QASSVTMT--SLAVTPPSIGGKHVVGQVGNLVVTFVTSEEMPADAVIKISCATDFDLEKITGASGTGINGTLELSRVG----NVVVLKRNAGSFRAAGTTVNLVIA-GVKNPSNTSAAGTLPPFQVAVYTSADALVETRSSV-------VPAVETGGTISSA-LVKLESVLPDTYTNAIISLFPDHQIPSDGSIQVNFPTGF 1296          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig66106.16050.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
A0A6H5L6Q6_9PHAE1.210e-10255.59Calx-beta domain-containing protein n=1 Tax=Ectoca... [more]
D7G5B0_ECTSI3.120e-8941.35Laminin IV type A domain-containing protein n=1 Ta... [more]
A0A2D6N2R1_9CHLR2.030e-4036.47Uncharacterized protein n=1 Tax=Dehalococcoidia ba... [more]
A0A835YKP8_9STRA3.280e-4033.93Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A2D6N2H7_9CHLR1.480e-3434.34Uncharacterized protein (Fragment) n=1 Tax=Dehaloc... [more]
A0A496RNW1_9BACT1.640e-2129.04Uncharacterized protein (Fragment) n=1 Tax=Candida... [more]
A0A410P3E8_9BACT1.280e-1734.40Uncharacterized protein n=1 Tax=Candidatus Velamen... [more]
A0A432JG40_9CHLR1.590e-1732.71Uncharacterized protein n=1 Tax=Chloroflexi bacter... [more]
A0A2A5FEC8_9CHLR1.580e-1632.82Uncharacterized protein n=5 Tax=Chloroflexi TaxID=... [more]
A0A2N1PPW2_9BACT7.580e-1126.38Uncharacterized protein (Fragment) n=1 Tax=Candida... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig66106contigM-pyrifera_M_contig66106:302..1288 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score346.3
Seed ortholog evalue1.6e-92
Seed eggNOG ortholog2880.D7G5B0
KEGG koko:K05849
KEGG TC2.A.19.3
KEGG Pathwayko04020,ko04022,ko04371,ko04740,ko04974,map04020,map04022,map04371,map04740,map04974
Hectar predicted targeting categoryother localisation
EggNOG free text desc.calcium:sodium antiporter activity
EggNOG OGsKOG1306@1,KOG1306@2759
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00536,ko02000
Exons1
Model size987
Cds size987
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816550.5130768-CDS-M-pyrifera_M_contig66106:301..12881622816550.5130768-CDS-M-pyrifera_M_contig66106:301..1288Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig66106 302..1288 +
1692278041.4200497-CDS-M-pyrifera_M_contig66106:301..12881692278041.4200497-CDS-M-pyrifera_M_contig66106:301..1288Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig66106 302..1288 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig66106.16050.1prot_M-pyrifera_M_contig66106.16050.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig66106 302..1288 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig66106.16050.1

>prot_M-pyrifera_M_contig66106.16050.1 ID=prot_M-pyrifera_M_contig66106.16050.1|Name=mRNA_M-pyrifera_M_contig66106.16050.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=329bp
VTLGSYIAGAEGSANVSFTISNPLPIDGHVVIEFPSNFTSINVTAVTVAG
VDGGFNVSVGGDGYTVDVHRDGTGTEVEAGTNITATVVDGVTNQLFEGSS
DVFPVVKTTLKDSTVSINEASSGVNSNDRAAAVVFTPGAFAVPPTVVLGS
SVAGVEGAANLSFTTANPLPADGHVIIKFPSSFTAINSRAARATGIDGSF
IVSVGADGFTVDVWRDGSGTEVGSGVNVSVMLLDGVVNEQFEGPSDVFPM
VKTTLAETDVSVDEASADFHDADRPAPAWFTPGVFAERPRVTLGSYIAGA
EGSANISFTISNPLPIDGHVVIEFPSNFT
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mRNA from alignment at M-pyrifera_M_contig66106:302..1288+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig66106.16050.1 ID=mRNA_M-pyrifera_M_contig66106.16050.1|Name=mRNA_M-pyrifera_M_contig66106.16050.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=987bp|location=Sequence derived from alignment at M-pyrifera_M_contig66106:302..1288+ (Macrocystis pyrifera P11B4 male)
GTGACACTAGGCAGCTACATCGCAGGTGCCGAGGGCTCGGCCAATGTCAG CTTCACCATCTCGAATCCGCTCCCGATAGATGGCCACGTGGTGATCGAGT TCCCCTCGAATTTCACGTCGATCAACGTCACAGCGGTCACGGTCGCCGGT GTTGACGGGGGATTCAATGTCTCTGTCGGCGGTGATGGCTACACCGTGGA CGTCCATCGCGATGGGACGGGCACCGAGGTGGAAGCGGGGACGAACATCA CTGCGACCGTGGTCGATGGTGTCACGAATCAGCTGTTCGAGGGGTCCAGC GACGTATTTCCTGTGGTGAAGACGACGCTGAAGGACTCCACGGTGTCGAT TAACGAGGCCAGCTCGGGCGTCAACAGCAACGATCGGGCTGCGGCCGTGG TGTTCACCCCAGGTGCCTTCGCCGTGCCGCCGACGGTAGTGCTTGGCAGC TCAGTGGCAGGGGTCGAGGGTGCAGCCAACCTCAGCTTCACAACCGCCAA TCCGTTGCCTGCGGATGGGCATGTGATAATCAAGTTCCCCTCAAGCTTCA CGGCCATCAATAGCAGGGCGGCCCGTGCGACAGGCATCGACGGAAGTTTC ATTGTTTCGGTGGGTGCTGATGGCTTCACGGTCGACGTTTGGCGTGACGG GTCGGGAACCGAGGTCGGCAGCGGGGTCAATGTGTCGGTGATGCTGCTGG ACGGTGTGGTCAACGAGCAGTTCGAGGGACCGAGCGACGTATTTCCGATG GTGAAGACCACGCTGGCTGAGACGGACGTTTCCGTCGACGAAGCGAGCGC CGACTTTCACGATGCAGACCGACCCGCCCCTGCGTGGTTCACCCCTGGCG TATTCGCCGAGCGACCACGCGTGACACTAGGCAGCTACATCGCAGGTGCC GAGGGTTCCGCCAATATCAGCTTCACCATCTCGAATCCGCTCCCGATAGA TGGCCACGTGGTTATCGAGTTCCCCTCGAATTTCACG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig66106:302..1288+

>mRNA_M-pyrifera_M_contig66106.16050.1 ID=mRNA_M-pyrifera_M_contig66106.16050.1|Name=mRNA_M-pyrifera_M_contig66106.16050.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1974bp|location=Sequence derived from alignment at M-pyrifera_M_contig66106:302..1288+ (Macrocystis pyrifera P11B4 male)
GTGACACTAGGCAGCTACATCGCAGGTGCCGAGGGCTCGGCCAATGTCAG
CTTCACCATCTCGAATCCGCTCCCGATAGATGGCCACGTGGTGATCGAGT
TCCCCTCGAATTTCACGTCGATCAACGTCACAGCGGTCACGGTCGCCGGT
GTTGACGGGGGATTCAATGTCTCTGTCGGCGGTGATGGCTACACCGTGGA
CGTCCATCGCGATGGGACGGGCACCGAGGTGGAAGCGGGGACGAACATCA
CTGCGACCGTGGTCGATGGTGTCACGAATCAGCTGTTCGAGGGGTCCAGC
GACGTATTTCCTGTGGTGAAGACGACGCTGAAGGACTCCACGGTGTCGAT
TAACGAGGCCAGCTCGGGCGTCAACAGCAACGATCGGGCTGCGGCCGTGG
TGTTCACCCCAGGTGCCTTCGCCGTGCCGCCGACGGTAGTGCTTGGCAGC
TCAGTGGCAGGGGTCGAGGGTGCAGCCAACCTCAGCTTCACAACCGCCAA
TCCGTTGCCTGCGGATGGGCATGTGATAATCAAGTTCCCCTCAAGCTTCA
CGGCCATCAATAGCAGGGCGGCCCGTGCGACAGGCATCGACGGAAGTTTC
ATTGTTTCGGTGGGTGCTGATGGCTTCACGGTCGACGTTTGGCGTGACGG
GTCGGGAACCGAGGTCGGCAGCGGGGTCAATGTGTCGGTGATGCTGCTGG
ACGGTGTGGTCAACGAGCAGTTCGAGGGACCGAGCGACGTATTTCCGATG
GTGAAGACCACGCTGGCTGAGACGGACGTTTCCGTCGACGAAGCGAGCGC
CGACTTTCACGATGCAGACCGACCCGCCCCTGCGTGGTTCACCCCTGGCG
TATTCGCCGAGCGACCACGCGTGACACTAGGCAGCTACATCGCAGGTGCC
GAGGGTTCCGCCAATATCAGCTTCACCATCTCGAATCCGCTCCCGATAGA
TGGCCACGTGGTTATCGAGTTCCCCTCGAATTTCACGGTGACACTAGGCA
GCTACATCGCAGGTGCCGAGGGCTCGGCCAATGTCAGCTTCACCATCTCG
AATCCGCTCCCGATAGATGGCCACGTGGTGATCGAGTTCCCCTCGAATTT
CACGTCGATCAACGTCACAGCGGTCACGGTCGCCGGTGTTGACGGGGGAT
TCAATGTCTCTGTCGGCGGTGATGGCTACACCGTGGACGTCCATCGCGAT
GGGACGGGCACCGAGGTGGAAGCGGGGACGAACATCACTGCGACCGTGGT
CGATGGTGTCACGAATCAGCTGTTCGAGGGGTCCAGCGACGTATTTCCTG
TGGTGAAGACGACGCTGAAGGACTCCACGGTGTCGATTAACGAGGCCAGC
TCGGGCGTCAACAGCAACGATCGGGCTGCGGCCGTGGTGTTCACCCCAGG
TGCCTTCGCCGTGCCGCCGACGGTAGTGCTTGGCAGCTCAGTGGCAGGGG
TCGAGGGTGCAGCCAACCTCAGCTTCACAACCGCCAATCCGTTGCCTGCG
GATGGGCATGTGATAATCAAGTTCCCCTCAAGCTTCACGGCCATCAATAG
CAGGGCGGCCCGTGCGACAGGCATCGACGGAAGTTTCATTGTTTCGGTGG
GTGCTGATGGCTTCACGGTCGACGTTTGGCGTGACGGGTCGGGAACCGAG
GTCGGCAGCGGGGTCAATGTGTCGGTGATGCTGCTGGACGGTGTGGTCAA
CGAGCAGTTCGAGGGACCGAGCGACGTATTTCCGATGGTGAAGACCACGC
TGGCTGAGACGGACGTTTCCGTCGACGAAGCGAGCGCCGACTTTCACGAT
GCAGACCGACCCGCCCCTGCGTGGTTCACCCCTGGCGTATTCGCCGAGCG
ACCACGCGTGACACTAGGCAGCTACATCGCAGGTGCCGAGGGTTCCGCCA
ATATCAGCTTCACCATCTCGAATCCGCTCCCGATAGATGGCCACGTGGTT
ATCGAGTTCCCCTCGAATTTCACG
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