mRNA_M-pyrifera_M_contig658.15984.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig658.15984.1
Unique NamemRNA_M-pyrifera_M_contig658.15984.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig658.15984.1 vs. uniprot
Match: D7G6A4_ECTSI (Rad51 DNA recombinase 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6A4_ECTSI)

HSP 1 Score: 348 bits (892), Expect = 1.540e-117
Identity = 178/248 (71.77%), Postives = 216/248 (87.10%), Query Frame = 1
Query:    1 MASQQPLRRLGLDEGIVARMTSEGLHTVGDLFSKTELQLVQALNLNQFEVVNLLRSVAKRIAPE-TKTAGELLRERRETGSSFFVSTGLPTIDNSLQGGFPTGMITELVGPAGVGKTQACLMLAAQACLPSRLGGLGEDAGVVYLDTERKFSPDRLVEIASTRMPEQYGDFAPT--GLERLLNQVTVFTVDTSSALLERLESLQTRIIEGNVRLIILDSVAALARRDYAKEETINRQDLLTRQAAVLK 735
            MA QQPLRRLGLD+ +V+R+ S GLHT GD+FSKTELQLVQ+L+ ++ +VV LL  V+ RI PE  KTAG+LLRERRE G+SFFV+TG+  +D++LQGGFPTGMITELVGPAG+GKTQ CL +AAQACLP++LGGLGEDAGVVYLDTERKFSPDRLVEIAS R P  YG+F+     +ERLLNQVTVF VD S+AL++RLE+LQ R+IE NVRLI+LDS+AALARRD+A+E+T++RQ+LLTRQAAVLK
Sbjct:    1 MAGQQPLRRLGLDDDLVSRLASAGLHTAGDMFSKTELQLVQSLDASREKVVELLDYVSTRIVPEQAKTAGDLLRERREAGASFFVATGIQPLDDALQGGFPTGMITELVGPAGIGKTQTCLQVAAQACLPAKLGGLGEDAGVVYLDTERKFSPDRLVEIASERHPGHYGEFSTEKGSMERLLNQVTVFPVDNSAALVDRLETLQARMIESNVRLIVLDSIAALARRDFAREDTLSRQELLTRQAAVLK 248          
BLAST of mRNA_M-pyrifera_M_contig658.15984.1 vs. uniprot
Match: UPI0014581226 (DNA repair protein RAD51 homolog 2-like isoform X1 n=2 Tax=Pecten maximus TaxID=6579 RepID=UPI0014581226)

HSP 1 Score: 181 bits (460), Expect = 7.370e-52
Identity = 105/246 (42.68%), Postives = 157/246 (63.82%), Query Frame = 1
Query:    7 SQQPLRRLGLDEGIVARMTSEGLHTVGDLFSKTELQLVQALNLNQFEVVNLLRSVAKRIAPETKTAGELLRERRETGSSFFVSTGLPTIDNSLQGGFPTGMITELVGPAGVGKTQACLMLAAQACLPSRLGGLGEDAGVVYLDTERKFSPDRLVEIASTRMPEQYGDFAPTGLERLLNQVTVFTVDTSSALLERLESLQTRIIEGNVRLIILDSVAALARRDYAKE---ETINRQDLLTRQAAVLK 735
            S + LRR+GL + ++  ++   +++  DL SKT+L+L++ L L  F+V  +++  +K  AP+ +T  EL  +R+E G  FF  T LP +DN L GG PTG ITE+ GPAG GKTQ CLML  Q  LP  LGGL     V+Y+DTE  FS +RLVEIA  + P+    F    L  L +QV V T  T ++L+ERL++++  II+  V+L+I+DS+A+L R++Y+        +R + L++QAA+LK
Sbjct:    2 SSKRLRRVGLSKEVLDCLSKNSIYSCKDLLSKTKLELLKFLGLGIFKVDEVVQLCSKACAPKPQTCLELWNKRKEKGCHFF-QTSLPDLDNVLHGGIPTGTITEISGPAGCGKTQFCLMLTVQCTLPLELGGLA--GNVLYIDTESAFSAERLVEIAQAKHPDL---FVGDKLVELTSQVFVDTQQTCASLMERLQTIEEEIIQKRVKLVIVDSMASLVRKEYSTSLGRNLTDRTNFLSQQAALLK 241          
BLAST of mRNA_M-pyrifera_M_contig658.15984.1 vs. uniprot
Match: A0A1Y1ICX6_KLENI (Putative DNA repair protein RAD51 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1ICX6_KLENI)

HSP 1 Score: 176 bits (445), Expect = 1.920e-49
Identity = 104/242 (42.98%), Postives = 152/242 (62.81%), Query Frame = 1
Query:   40 EGIVA-RMTSEGLHTVGDLFSKTELQLVQALNLNQFEVVNLLRSVAKRIAPETKTAGELLRERRETGSSFF---------VSTGLPTIDNSLQGGFPTGMITELVGPAGVGKTQACLMLAAQACLPSRLGGLGEDAGVVYLDTERKFSPDRLVEIASTRMPEQYGDFAPTGLERLLNQVTVFTVDTSSALLERLESLQTRIIEGNVRLIILDSVAALARRDYAKEETINRQDLLTRQAAVLK 735
            EG+VA R+ S  L T  D+  KTEL LV+ L+L    V   + ++++ +AP  +T  E+  ++++ G             + T LP++D++L+GG P G ITELVGPAGVGKTQ CLML+  A LP+ +GGL  D   VY+DTE KFS  RL+EIA+ R+P+ + D     ++ L ++V V   +++  LL RL+ L+  +I    +LI+LDSVAAL R +Y  ++   RQDLL RQAA+LK
Sbjct:   12 EGLVAHRLKSRRLETAKDVLCKTELDLVELLDLPADVVAKAVAAISQNVAPTRRTVLEMYMDQQQPGDIQGGHLHTDLPKLPTNLPSLDDALRGGVPLGSITELVGPAGVGKTQLCLMLSIFATLPTDIGGL--DGKCVYIDTENKFSAKRLIEIATMRLPDSFPD--EQAVQHLTSRVLVLRPNSAIDLLTRLQKLEEAMIREKAKLIVLDSVAALVRSEYGHDQLQQRQDLLGRQAALLK 249          
BLAST of mRNA_M-pyrifera_M_contig658.15984.1 vs. uniprot
Match: UPI000B45859F (LOW QUALITY PROTEIN: DNA repair protein RAD51 homolog 2-like n=1 Tax=Mizuhopecten yessoensis TaxID=6573 RepID=UPI000B45859F)

HSP 1 Score: 172 bits (436), Expect = 7.730e-48
Identity = 103/246 (41.87%), Postives = 156/246 (63.41%), Query Frame = 1
Query:    7 SQQPLRRLGLDEGIVARMTSEGLHTVGDLFSKTELQLVQALNLNQFEVVNLLRSVAKRIAPETKTAGELLRERRETGSSFFVSTGLPTIDNSLQGGFPTGMITELVGPAGVGKTQACLMLAAQACLPSRLGGLGEDAGVVYLDTERKFSPDRLVEIASTRMPEQYGDFAPTGLERLLNQVTVFTVDTSSALLERLESLQTRIIEGNVRLIILDSVAALARRDYAKE---ETINRQDLLTRQAAVLK 735
            S + LRR+GL +G++  ++   ++T  DL SKT+L+L++ L L+ ++V  ++   +K  AP+ +T+ EL  +R++ G  FF  T LP +D  L GG P G ITE+ GPAG GKTQ CLML+ Q  LP  LGGL     V+Y+DTE  FS +RLVEIA  +  +    F    L  L +QV V T  T ++L++RLE+++  II   V+LII+DS+A+L R++Y+        +R + L++QAA+LK
Sbjct:    2 SSKRLRRVGLGKGVLDCLSKNNIYTCKDLLSKTKLELLKFLGLSIYKVDEVVELCSKACAPKPRTSLELWNKRKQ-GCHFF-QTSLPDLDKVLHGGIPMGTITEISGPAGCGKTQFCLMLSVQCTLPLELGGLA--GNVLYIDTESAFSAERLVEIAQAKHRDL---FVEDKLVELTSQVYVDTQQTCASLMDRLETIEEDIIXKKVKLIIVDSIASLVRKEYSTSLGRNLTDRTNFLSKQAALLK 240          
BLAST of mRNA_M-pyrifera_M_contig658.15984.1 vs. uniprot
Match: UPI0014555572 (DNA repair protein RAD51 homolog 2-like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI0014555572)

HSP 1 Score: 168 bits (425), Expect = 9.370e-48
Identity = 99/248 (39.92%), Postives = 145/248 (58.47%), Query Frame = 1
Query:    1 MASQQPLRRLGLDEGIVARMTSEGLHTVGDLFSKTELQLVQALNLNQFEVVNLLRSVAKRIAPETKTAGELLRERRETGSSFFVSTGLPTIDNSLQGGFPTGMITELVGPAGVGKTQACLMLAAQACLPSRLGGLGEDAGVVYLDTERKFSPDRLVEIASTRMPEQYGDFAPTGLERLLNQVTVFTVDTSSALLERLESLQTRIIEGNVRLIILDSVAALARRDYAKEETIN---RQDLLTRQAAVLK 735
            MAS++ ++RLGL+  +V R+    + T  DL SKT L+L++   + +  V+N+L+  ++   P   TA  +L    E     F  T L  +D+ L GG P G ITE+ GP G GKTQ C+MLA  A LP  +GGL  D  V Y+DTE  F+ +RLVE+A  R P  +   A      L ++V ++   T S+LL RL+ L+  +I   +RLIILDSVA+L R+++      N   R +LL++QAA+LK
Sbjct:    1 MASRK-VQRLGLEPTVVERLKKHNVFTCQDLLSKTRLELLKITGMTEPRVINILQVSSEACLPRRTTALSMLTRTNEDECPAFFQTSLRQLDDVLHGGLPAGTITEIAGPPGCGKTQFCIMLALLATLPRAMGGL--DGAVAYIDTESAFTAERLVEVARCRFPNHFNQDA--SFVSLTSRVHIYLESTCSSLLSRLQHLEEELITKGIRLIILDSVASLVRKEFDSSHLSNLAARTNLLSKQAAILK 243          
BLAST of mRNA_M-pyrifera_M_contig658.15984.1 vs. uniprot
Match: A0A2K1IF00_PHYPA (RECA_2 domain-containing protein n=3 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1IF00_PHYPA)

HSP 1 Score: 171 bits (433), Expect = 2.540e-47
Identity = 98/246 (39.84%), Postives = 156/246 (63.41%), Query Frame = 1
Query:    1 MASQQPLRRLGLDEGIVARMTSEGLHTVGDLFSKTELQLVQALNLNQFEVVNLLRSVAKRIAPETKTAGELLRERRETGSSF-FVSTGLPTIDNSLQGGFPTGMITELVGPAGVGKTQACLMLAAQACLPSRLGGLGEDAGVVYLDTERKFSPDRLVEIASTRMPEQYGDFAPTGLERLLNQVTVFTVDTSSALLERLESLQTRIIEGNVRLIILDSVAALARRDYAKEETINRQDLLTRQAAVLK 735
            MAS   L  +GL++ I     +  + T  +   KTEL+LV+ L++   EV + L  ++ ++ P   +   +L ER +  ++F  + TGL  +D SL GG P G++TE+VGPAG+GKTQ C+ L+  A +P  LGGL  D  V+Y+DTE+KF P+RL++IA +R P+ +   +   L++L  +V +   DT S L+ RL+ L+  I +  VRL+++DSVAAL + +Y +++ I RQ+LL RQA++LK
Sbjct:    1 MASMS-LSSMGLNDSIAHIFRARNILTAKEALFKTELELVELLDVPFGEVQSALAIISAKVCPPCHSVFNILSERAKKEAAFGHLPTGLGALDESLWGGIPFGVMTEIVGPAGIGKTQFCITLSVLAAMPVELGGL--DGRVIYIDTEKKFRPERLLQIAKSRFPDHFT--SDQVLQQLAARVLMVQPDTVSELMLRLQGLEEAIRQHGVRLLVVDSVAALLQSEYGRDDIIRRQELLGRQASILK 241          
BLAST of mRNA_M-pyrifera_M_contig658.15984.1 vs. uniprot
Match: A0A6P4YVG7_BRABE (DNA repair protein RAD51 homolog 2-like isoform X7 n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4YVG7_BRABE)

HSP 1 Score: 167 bits (423), Expect = 8.830e-47
Identity = 99/247 (40.08%), Postives = 146/247 (59.11%), Query Frame = 1
Query:    7 SQQPLRRLGLDEGIVARMTS-EGLHTVGDLFSKTELQLVQALNLNQFEVVNLLRSVAKRIAPETKTAGELLRERRETGSSFFVSTGLPTIDNSLQGGFPTGMITELVGPAGVGKTQACLMLAAQACLPSRLGGLGEDAGVVYLDTERKFSPDRLVEIASTRMPEQYGDFAPTGLERLLNQVTVFTVDTSSALLERLESLQTRIIEGNVRLIILDSVAALARRDY---AKEETINRQDLLTRQAAVLK 735
            S + LRRLGL+  +V R+   + L +  D+  K  L+L    NLN  +V  ++ + ++  AP   TA ++ +    +GS+ F ST LP +D +L GG P G +TE+ GPAG GKTQ C+ML+  A LP  +GGLG    VVY+DTE  FS +RLVE+A  R P  + +       +L +QV V    T S L  RL+SL+  +IE  VRL++LDSVA++ R+++    +     R  LL ++AA+LK
Sbjct:    2 SLRKLRRLGLEPELVDRLERHKKLSSCQDILVKVHLELQHLTNLNHSDVQKIVTATSRACAPTPTTALQMKQAGLSSGSAPFFSTSLPGLDQALHGGIPAGSVTEIAGPAGCGKTQFCIMLSVLATLPCEMGGLG--GAVVYIDTESAFSAERLVEVAQDRCPHHFSN--DDAFYKLTSQVYVHKTPTCSDLWNRLQSLEEELIEKRVRLVVLDSVASVVRKEFDNSLRGNLAQRVKLLAKEAALLK 244          
BLAST of mRNA_M-pyrifera_M_contig658.15984.1 vs. uniprot
Match: A0A388L439_CHABU (RECA_2 domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388L439_CHABU)

HSP 1 Score: 167 bits (423), Expect = 2.720e-46
Identity = 102/247 (41.30%), Postives = 145/247 (58.70%), Query Frame = 1
Query:   28 LGLDEGIVARMTSEGLHTVGDLFSKTELQLVQALNLNQFEVVNLLRSVAKRIAPETKTAGELLRERRET---GSSFFVSTGLPTIDNSLQGGFPTGMITELVGPAGVGKTQACLMLAAQACLPSRLGGLGEDAGVVYLDTERKFSPDRLVEIASTRMP------EQYGDFAPTG--LERLLNQVTVFTVDTSSALLERLESLQTRIIEGNVRLIILDSVAALARRDYAKEETINRQDLLTRQAAVLK 735
            +GLD+ I+ R+T+  LHT  D+  + EL L++ ++L        L  V++ + P  +T  EL+RE  E    G    + T L  +D++L GG P G ITELVGPAG+GKTQ C ML+  A LP   GGLG    V+Y+DTE KFS +RL EIA   +       E  G     G  ++ L  +V V    +S  ++ERL+ L+  +IE  V+L+++DSVA+L R +Y  E  + RQ+LL RQAAVLK
Sbjct:    1 MGLDDAILRRLTARDLHTARDVLCRPELDLMEIVDLPADVQSQTLMHVSRAVCPPCRTVLELVREEDEASKAGRPRSLKTRLRAVDHALLGGIPLGAITELVGPAGIGKTQFCFMLSVFAILPVEWGGLG--GSVIYIDTENKFSSERLFEIAQHHIAAASPGEELSGSSDRLGGMMDHLGAKVVVVKPTSSGEVIERLQGLEEAVIERQVKLLVVDSVASLVRSEYGCENIVKRQELLGRQAAVLK 245          
BLAST of mRNA_M-pyrifera_M_contig658.15984.1 vs. uniprot
Match: A0A6J8ED53_MYTCO (RAD51L1 n=1 Tax=Mytilus coruscus TaxID=42192 RepID=A0A6J8ED53_MYTCO)

HSP 1 Score: 167 bits (422), Expect = 2.900e-46
Identity = 96/246 (39.02%), Postives = 146/246 (59.35%), Query Frame = 1
Query:    7 SQQPLRRLGLDEGIVARMTSEGLHTVGDLFSKTELQLVQALNLNQFEVVNLLRSVAKRIAPETKTAGELLRERRETGSSFFVSTGLPTIDNSLQGGFPTGMITELVGPAGVGKTQACLMLAAQACLPSRLGGLGEDAGVVYLDTERKFSPDRLVEIASTRMPEQYGDFAPTGLERLLNQVTVFTVDTSSALLERLESLQTRIIEGNVRLIILDSVAALARRDYAK---EETINRQDLLTRQAAVLK 735
            S + LRR GL + I  R+    + T  D  SK  L+L++ L L  + + N++++  K   PE  TA ELL  R+   S  F  T LP +D  L GG P G +TE+ GP+G GKTQ C+ML+  A LP+ +G L  D  V+Y+DTE  FS +RLV++A  + PE +       L +L   + V    T S+L++RL SL+  II   ++LI++DS+A+L R++Y+    +  I+R + L++QAA+LK
Sbjct:    2 SNKKLRRAGLSKDITERLAVNNVFTCKDFLSKNNLELLKLLGLGYYSLQNVVKTCCKACVPEPVTALELLERRK---SKNFFKTTLPDLDIVLHGGIPMGTVTEIAGPSGCGKTQFCVMLSVVATLPANMGSL--DGCVMYIDTESAFSAERLVQVAQCKYPEYFSQ--EDSLLQLTRSIFVDVQQTCSSLIKRLTSLEEEIISKKIKLIVVDSIASLVRKEYSGSGGKSLIDRTNFLSQQAAILK 240          
BLAST of mRNA_M-pyrifera_M_contig658.15984.1 vs. uniprot
Match: A0A6P4Z3S1_BRABE (DNA repair protein RAD51 homolog 2-like isoform X1 n=6 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4Z3S1_BRABE)

HSP 1 Score: 167 bits (423), Expect = 6.940e-46
Identity = 99/247 (40.08%), Postives = 146/247 (59.11%), Query Frame = 1
Query:    7 SQQPLRRLGLDEGIVARMTS-EGLHTVGDLFSKTELQLVQALNLNQFEVVNLLRSVAKRIAPETKTAGELLRERRETGSSFFVSTGLPTIDNSLQGGFPTGMITELVGPAGVGKTQACLMLAAQACLPSRLGGLGEDAGVVYLDTERKFSPDRLVEIASTRMPEQYGDFAPTGLERLLNQVTVFTVDTSSALLERLESLQTRIIEGNVRLIILDSVAALARRDY---AKEETINRQDLLTRQAAVLK 735
            S + LRRLGL+  +V R+   + L +  D+  K  L+L    NLN  +V  ++ + ++  AP   TA ++ +    +GS+ F ST LP +D +L GG P G +TE+ GPAG GKTQ C+ML+  A LP  +GGLG    VVY+DTE  FS +RLVE+A  R P  + +       +L +QV V    T S L  RL+SL+  +IE  VRL++LDSVA++ R+++    +     R  LL ++AA+LK
Sbjct:    2 SLRKLRRLGLEPELVDRLERHKKLSSCQDILVKVHLELQHLTNLNHSDVQKIVTATSRACAPTPTTALQMKQAGLSSGSAPFFSTSLPGLDQALHGGIPAGSVTEIAGPAGCGKTQFCIMLSVLATLPCEMGGLG--GAVVYIDTESAFSAERLVEVAQDRCPHHFSN--DDAFYKLTSQVYVHKTPTCSDLWNRLQSLEEELIEKRVRLVVLDSVASVVRKEFDNSLRGNLAQRVKLLAKEAALLK 244          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig658.15984.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6A4_ECTSI1.540e-11771.77Rad51 DNA recombinase 2 n=1 Tax=Ectocarpus silicul... [more]
UPI00145812267.370e-5242.68DNA repair protein RAD51 homolog 2-like isoform X1... [more]
A0A1Y1ICX6_KLENI1.920e-4942.98Putative DNA repair protein RAD51 n=1 Tax=Klebsorm... [more]
UPI000B45859F7.730e-4841.87LOW QUALITY PROTEIN: DNA repair protein RAD51 homo... [more]
UPI00145555729.370e-4839.92DNA repair protein RAD51 homolog 2-like n=1 Tax=As... [more]
A0A2K1IF00_PHYPA2.540e-4739.84RECA_2 domain-containing protein n=3 Tax=Physcomit... [more]
A0A6P4YVG7_BRABE8.830e-4740.08DNA repair protein RAD51 homolog 2-like isoform X7... [more]
A0A388L439_CHABU2.720e-4641.30RECA_2 domain-containing protein n=1 Tax=Chara bra... [more]
A0A6J8ED53_MYTCO2.900e-4639.02RAD51L1 n=1 Tax=Mytilus coruscus TaxID=42192 RepID... [more]
A0A6P4Z3S1_BRABE6.940e-4640.08DNA repair protein RAD51 homolog 2-like isoform X1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig658contigM-pyrifera_M_contig658:21514..24468 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score346.7
Seed ortholog evalue9.1e-93
Seed eggNOG ortholog2880.D7G6A4
Preferred nameRAD51B
KEGG koko:K10869
KEGG Pathwayko03440,map03440
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000150,GO:0000217,GO:0000280,GO:0000400,GO:0000707,GO:0000724,GO:0000725,GO:0000730,GO:0001701,GO:0001824,GO:0001832,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005657,GO:0005694,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006312,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007049,GO:0007127,GO:0007131,GO:0007275,GO:0007346,GO:0007596,GO:0007599,GO:0008094,GO:0008150,GO:0008152,GO:0008284,GO:0009314,GO:0009611,GO:0009628,GO:0009790,GO:0009792,GO:0009888,GO:0009987,GO:0010212,GO:0010389,GO:0010564,GO:0010971,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022402,GO:0022414,GO:0022607,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032991,GO:0033061,GO:0033063,GO:0033554,GO:0034622,GO:0034641,GO:0035825,GO:0040007,GO:0042060,GO:0042127,GO:0042148,GO:0042623,GO:0043009,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044464,GO:0045003,GO:0045787,GO:0045931,GO:0046483,GO:0048285,GO:0048518,GO:0048522,GO:0048589,GO:0048856,GO:0050789,GO:0050794,GO:0050817,GO:0050878,GO:0050896,GO:0051321,GO:0051716,GO:0051726,GO:0060429,GO:0061053,GO:0061982,GO:0065003,GO:0065004,GO:0065007,GO:0065008,GO:0070013,GO:0071704,GO:0071824,GO:0071840,GO:0090068,GO:0090304,GO:0090735,GO:0097159,GO:0140013,GO:0140097,GO:1901360,GO:1901363,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902749,GO:1902751,GO:1903046
EggNOG free text desc.recombinase activity
EggNOG OGsCOG0468@1,KOG1433@2759
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03400
Exons5
Model size738
Cds size738
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig658.15984.1prot_M-pyrifera_M_contig658.15984.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig658 21514..24468 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816546.693184-CDS-M-pyrifera_M_contig658:21513..218011622816546.693184-CDS-M-pyrifera_M_contig658:21513..21801Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig658 21514..21801 +
1692278039.267329-CDS-M-pyrifera_M_contig658:21513..218011692278039.267329-CDS-M-pyrifera_M_contig658:21513..21801Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig658 21514..21801 +
1622816546.7038126-CDS-M-pyrifera_M_contig658:22636..227951622816546.7038126-CDS-M-pyrifera_M_contig658:22636..22795Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig658 22637..22795 +
1692278039.281588-CDS-M-pyrifera_M_contig658:22636..227951692278039.281588-CDS-M-pyrifera_M_contig658:22636..22795Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig658 22637..22795 +
1622816546.7163885-CDS-M-pyrifera_M_contig658:23552..236481622816546.7163885-CDS-M-pyrifera_M_contig658:23552..23648Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig658 23553..23648 +
1692278039.2912948-CDS-M-pyrifera_M_contig658:23552..236481692278039.2912948-CDS-M-pyrifera_M_contig658:23552..23648Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig658 23553..23648 +
1622816546.7276666-CDS-M-pyrifera_M_contig658:23929..240551622816546.7276666-CDS-M-pyrifera_M_contig658:23929..24055Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig658 23930..24055 +
1692278039.2988665-CDS-M-pyrifera_M_contig658:23929..240551692278039.2988665-CDS-M-pyrifera_M_contig658:23929..24055Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig658 23930..24055 +
1622816546.740584-CDS-M-pyrifera_M_contig658:24399..244681622816546.740584-CDS-M-pyrifera_M_contig658:24399..24468Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig658 24400..24468 +
1692278039.3071353-CDS-M-pyrifera_M_contig658:24399..244681692278039.3071353-CDS-M-pyrifera_M_contig658:24399..24468Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig658 24400..24468 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig658.15984.1

>prot_M-pyrifera_M_contig658.15984.1 ID=prot_M-pyrifera_M_contig658.15984.1|Name=mRNA_M-pyrifera_M_contig658.15984.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=246bp
MASQQPLRRLGLDEGIVARMTSEGLHTVGDLFSKTELQLVQALNLNQFEV
VNLLRSVAKRIAPETKTAGELLRERRETGSSFFVSTGLPTIDNSLQGGFP
TGMITELVGPAGVGKTQACLMLAAQACLPSRLGGLGEDAGVVYLDTERKF
SPDRLVEIASTRMPEQYGDFAPTGLERLLNQVTVFTVDTSSALLERLESL
QTRIIEGNVRLIILDSVAALARRDYAKEETINRQDLLTRQAAVLK*
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mRNA from alignment at M-pyrifera_M_contig658:21514..24468+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig658.15984.1 ID=mRNA_M-pyrifera_M_contig658.15984.1|Name=mRNA_M-pyrifera_M_contig658.15984.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=2955bp|location=Sequence derived from alignment at M-pyrifera_M_contig658:21514..24468+ (Macrocystis pyrifera P11B4 male)
ATGGCTAGCCAACAACCTCTCCGACGGCTCGGCCTAGACGAAGGGATCGT CGCCCGTATGACCTCCGAGGGGTTGCATACGGTGGGCGATCTATTCTCGA AGACGGAGCTGCAGCTGGTCCAGGCTTTGAATTTAAACCAATTTGAGGTT GTGAACCTGTTGCGTTCCGTTGCCAAGAGGATAGCACCAGAAACCAAGAC GGCTGGCGAACTGCTGAGAGAAAGAAGAGAGACCGGCAGCAGCTTCTTCG TGTCTACAGGCCTCCCGACCATAGACAACTCATTGCAGGTGCAACTACTT TACTCTGTAGTACTGCAGATACGGTGCCTGTAGCATTTCGGTGTTCTGTA CACGGTAAAGCCCTGCTGCACCTTATCTCTGCACGAAGCCTGTACCACGT AATTGAGAAATCGGCACCCCAGATTCGTTTTTAGTACTTTCCGCTGCACG ATGCAGACTGCTTTTGAAAATTTGAAAATTTGAAATTCGAAAATCGCTCG TTTTGTCGTTTTTTCGATACGAGCAGCAGCATCAAATCAGGACTGATTCG AGTGCTGGGTATTTCACACCAATATCTCCTGGTACCATCGATATCGAGCA TTGTACTCACATAACCTATTATTAATATGCGAGTGGAGATGCACCATTGC ACCAGGAGACCTAACGTTCTCTGTATTTAGAGCTGAATTTTCATGGCCGT CCAAATCCATATGATATCCGGAGCAGTACCTTCAAATTTCACGAGAAACA GGGGCACTTACCATACACATACCTATATGTCGAGTACTGTATCTTTGCAT CTGAAACGGAATGGTGTTGGTGTTGGTTCAGTGTCTCACTTGGTCAGGGA ATGCGCCGTTGATGAAGGTTTTGGCCCCGGGTTTCGGTGTAAGCCGGGGG GTGGGTGGTGCGATGGGCGAAAAGTGTCGTCTCTTGCTGCAGCTGTCGCC TTACCTCCTTGCTCCTTACCATATCGACTTACCGACCAGAGGCACAAATT GACAGGGAACGTCCAATTCCTGTTCGTCTTTTCGTCCATTCCGTCAGTTT TTCTCCCTGGAACGGATGAGCAGAATATGATGCGAGCGTTGCCCTCGATT AATTGCCCCTGGGTCGCTCTCAGGGTGGCTTCCCCACGGGCATGATCACC GAGCTCGTCGGACCTGCAGGGGTCGGCAAGACTCAGGCTTGCCTGATGCT GGCGGCCCAAGCATGTCTACCGTCGAGATTAGGTGGCCTCGGCGAGGATG CTGGCGTGGTGTATTTAGATACCGAGCGCAAGGTGCGCAATGAGGGTGGA CGTAGGTAACAAGATTATGGCGGCAATCCCAAAACCGAGAAGTACTGTAC AACACGTGTGATGACACAACACCCCCCCCCTCGGACGGATTTTCAAGCTA TATTTCTCCATCACGGGGAGTGTCCAAAAATCGAGCGATGCATCTGTCGA AACATCTCGACCATATCTTGCCAAAGCCGCCATTTTTCGTGTGTGTACCA CCCTTGAGTTGGGGGGACTCGGCTCGGATATTCATCCCAGGGGTAGGCGG TGTCAAGGTATCGTGCGTGTTGTACGGTACACCGAAACGTGACAGCTACT TTGTGGATGCAAAATAGACGAACCCGGTGCGTTACCCTTTCGTTTTCCTA CCTCAATCAATTCGCAACGCATTGGGTTTTCTGTTTCACAGTTCTGACCA CAGAATTTTTCATGTCTCTTGGATTACGAATGAGTGCGGACAGTGGGTGT GCTGTCGCCTGCCGTGGGGTGAAAATAACGGTTCAGTGTGGAGACAAGAC ACACACGCGCGATAGGGGCTAGCATAGCGTAGAGCGAGACGTGCGTGAAT GATCGCGGTGTCGGCACGAGGCGCAGGCCTCGACCATACCATGTTTCGCT ATTATGGTTGACGGCGGTTGTTGTGATCTTTGATGGTCAGGACTGTTTTT TCGTAGTGGATGCTGCGGCAGGTTATGCCATGTGTTGCTCTGTGAGACAC CAAAACACGCTGTTTATGCCCGCCTGTATGCCGTTGCAGTTCAGCCCAGA TCGGCTCGTGGAGATCGCGAGCACACGGATGCCAGAGCAATACGGCGATT TTGCCCCCACCGGGTTGGAGCGGTTGCTAAATCAGGTGGGCTGGGCGTGG TTGATGTTCCAAGCGGAGTGAAACGCTTAAGGTACTGTTTTGCCTGCGGG AACAGGCGACCCAACTTTGCTGTTGGGGTACAGCCTCAGATGCTGACAGC TGGTGTTGTTTTGCCTGCGGAAACAGACCATGAAAAATTGCAGTCGGGGT ACAAACTCTGATGCTGATTAAAACAGAGATTGCGACCCTGACCTGTCATT TGGCTTGCCTGTGTATACTGATGTGTGTCTCTTATGTTGATGTTTATGAA CAATGTCCTCCTGCAGGTGACCGTTTTTACCGTCGACACCTCCTCTGCCC TGCTGGAGCGCCTGGAGTCTCTCCAGACACGCATAATCGAGGGGAACGTG CGCCTCATTATCCTGGACTCCGTTGCAGCTTTGGCGCGAAGGGTGGGCAC GTCCAAATCAATACCTGCTGTATACTGCTGTACGTCGCTCGTAAGCCCGA ACATAGCCGAGGGTCTACTTGGCGGGAAAATAAAAAACGACGTCGTGCTT TTCGTATGCCTACTTTAGTAGTCACGTCGTGTTTATTATAATAGTAACAA CAGGGTAGTTTTTTGCTGTGAGTGAAGTGCACATTGCAATATTCATTGGT TGATATTATATTTCATTAGTGAGTCTGCAGAGGAGTCATGGGCCAACGCT TCCGCGATCGCATATCCGCCCACGCACACGCAGCATTAACCTGGTGCCTG CACGTTTTTTTGTTTTTCCTTTTGTCGGCCGCGCAGGATTACGCGAAGGA AGAGACGATCAACAGACAGGACCTGCTGACCCGGCAAGCTGCAGTCCTTA AGTAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig658:21514..24468+

>mRNA_M-pyrifera_M_contig658.15984.1 ID=mRNA_M-pyrifera_M_contig658.15984.1|Name=mRNA_M-pyrifera_M_contig658.15984.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1476bp|location=Sequence derived from alignment at M-pyrifera_M_contig658:21514..24468+ (Macrocystis pyrifera P11B4 male)
ATGGCTAGCCAACAACCTCTCCGACGGCTCGGCCTAGACGAAGGGATCGT
CGCCCGTATGACCTCCGAGGGGTTGCATACGGTGGGCGATCTATTCTCGA
AGACGGAGCTGCAGCTGGTCCAGGCTTTGAATTTAAACCAATTTGAGGTT
GTGAACCTGTTGCGTTCCGTTGCCAAGAGGATAGCACCAGAAACCAAGAC
GGCTGGCGAACTGCTGAGAGAAAGAAGAGAGACCGGCAGCAGCTTCTTCG
TGTCTACAGGCCTCCCGACCATAGACAACTCATTGCAGATGGCTAGCCAA
CAACCTCTCCGACGGCTCGGCCTAGACGAAGGGATCGTCGCCCGTATGAC
CTCCGAGGGGTTGCATACGGTGGGCGATCTATTCTCGAAGACGGAGCTGC
AGCTGGTCCAGGCTTTGAATTTAAACCAATTTGAGGTTGTGAACCTGTTG
CGTTCCGTTGCCAAGAGGATAGCACCAGAAACCAAGACGGCTGGCGAACT
GCTGAGAGAAAGAAGAGAGACCGGCAGCAGCTTCTTCGTGTCTACAGGCC
TCCCGACCATAGACAACTCATTGCAGGGTGGCTTCCCCACGGGCATGATC
ACCGAGCTCGTCGGACCTGCAGGGGTCGGCAAGACTCAGGCTTGCCTGAT
GCTGGCGGCCCAAGCATGTCTACCGTCGAGATTAGGTGGCCTCGGCGAGG
ATGCTGGCGTGGTGTATTTAGATACCGAGCGCAAGGGTGGCTTCCCCACG
GGCATGATCACCGAGCTCGTCGGACCTGCAGGGGTCGGCAAGACTCAGGC
TTGCCTGATGCTGGCGGCCCAAGCATGTCTACCGTCGAGATTAGGTGGCC
TCGGCGAGGATGCTGGCGTGGTGTATTTAGATACCGAGCGCAAGTTCAGC
CCAGATCGGCTCGTGGAGATCGCGAGCACACGGATGCCAGAGCAATACGG
CGATTTTGCCCCCACCGGGTTGGAGCGGTTGCTAAATCAGTTCAGCCCAG
ATCGGCTCGTGGAGATCGCGAGCACACGGATGCCAGAGCAATACGGCGAT
TTTGCCCCCACCGGGTTGGAGCGGTTGCTAAATCAGGTGACCGTTTTTAC
CGTCGACACCTCCTCTGCCCTGCTGGAGCGCCTGGAGTCTCTCCAGACAC
GCATAATCGAGGGGAACGTGCGCCTCATTATCCTGGACTCCGTTGCAGCT
TTGGCGCGAAGGGTGACCGTTTTTACCGTCGACACCTCCTCTGCCCTGCT
GGAGCGCCTGGAGTCTCTCCAGACACGCATAATCGAGGGGAACGTGCGCC
TCATTATCCTGGACTCCGTTGCAGCTTTGGCGCGAAGGGATTACGCGAAG
GAAGAGACGATCAACAGACAGGACCTGCTGACCCGGCAAGCTGCAGTCCT
TAAGTAAGATTACGCGAAGGAAGAGACGATCAACAGACAGGACCTGCTGA
CCCGGCAAGCTGCAGTCCTTAAGTAA
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