mRNA_M-pyrifera_M_contig65793.15979.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig65793.15979.1
Unique NamemRNA_M-pyrifera_M_contig65793.15979.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig65793.15979.1 vs. uniprot
Match: A0A2D8GI67_9ACTN (Beta sliding clamp n=6 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D8GI67_9ACTN)

HSP 1 Score: 547 bits (1410), Expect = 6.650e-194
Identity = 289/361 (80.06%), Postives = 322/361 (89.20%), Query Frame = 1
Query:    1 CERDVLAKALADAGRAVTTRGGALPVLAGVXXXXXXXXXXXXXXXXDLTISVTIEVSGSEDGIAVLPSKLASDVVRSVRAGGVDVTVEDDDARIVASPSEFAIRIIPADEFPELAAPSGSAVTLDAAAFKAAIEQVEKAASSDDARPILTGVLMAAEEDGLRLVSTDSYRLSVRDLAGTSVLGEGQKVLVPSRALKELARVVGEEESITLRLGDRDAGFEVGSVSVTTRLIEGEFPNYRGLIPTNHPNQLTVDRTTLLDAVRRVRLLAQESTPVRMAMSADGLELVAVTQDVGQAHEAVEEATYNGEDLTVAFNPEYLIDGIEVAPGDEITLETVDELKPALLKSSEDPNFLYLLMPVRVS 1083
            CERD L +AL+ AGRAVTTRGGALPVLAGV                DLTI+V +EV G EDG AVLPSKL SDV RS+R G VD+ +ED+DARIV++PSEF+IR+IPADEFPEL++  G AVTLDA+AF+AAI+QVEKAASSDDARPILTGVLMAAE+DGLRLVSTDSYRLSVRDLAGT++LGEGQKVLVPSRALKEL+RVVG+ + ITLRLG+RDAGFEVG V VTTRLIEG+FPNYRGLIP+NHPN LTVDR TLLDAVRRVRLLAQESTPVR+AMS+DGLELVAVTQDVGQAHEAVE A+Y+G++LTVAFNPEYLIDGIEVAPGDEI LETVDELKPALLKSS+DPNFLYLLMPVRVS
Sbjct:    5 CERDTLVEALSAAGRAVTTRGGALPVLAGVRMELVGDRLTVTGSDLDLTITVEVEVVGGEDGAAVLPSKLISDVARSLRPGAVDIAIEDEDARIVSAPSEFSIRVIPADEFPELSSADGDAVTLDASAFRAAIDQVEKAASSDDARPILTGVLMAAEDDGLRLVSTDSYRLSVRDLAGTTILGEGQKVLVPSRALKELSRVVGDADEITLRLGERDAGFEVGPVKVTTRLIEGDFPNYRGLIPSNHPNALTVDRETLLDAVRRVRLLAQESTPVRLAMSSDGLELVAVTQDVGQAHEAVE-ASYSGDELTVAFNPEYLIDGIEVAPGDEIILETVDELKPALLKSSDDPNFLYLLMPVRVS 364          
BLAST of mRNA_M-pyrifera_M_contig65793.15979.1 vs. uniprot
Match: A0A3M2GJQ5_ACTSX (Beta sliding clamp n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2GJQ5_ACTSX)

HSP 1 Score: 495 bits (1274), Expect = 3.150e-173
Identity = 267/361 (73.96%), Postives = 301/361 (83.38%), Query Frame = 1
Query:    1 CERDVLAKALADAGRAVTTRGGALPVLAGVXXXXXXXXXXXXXXXXDLTISVTIEVSGSEDGIAVLPSKLASDVVRSVRAGGVDVTVEDDDARIVASPSEFAIRIIPADEFPELAAPSGSAVTLDAAAFKAAIEQVEKAASSDDARPILTGVLMAAEEDGLRLVSTDSYRLSVRDLAGTSVLGEGQKVLVPSRALKELARVVGEEESITLRLGDRDAGFEVGSVSVTTRLIEGEFPNYRGLIPTNHPNQLTVDRTTLLDAVRRVRLLAQESTPVRMAMSADGLELVAVTQDVGQAHEAVEEATYNGEDLTVAFNPEYLIDGIEVAPGDEITLETVDELKPALLKSSEDPNFLYLLMPVRVS 1083
            CERDVL +AL  AGRAVTTRG ALPVL GV                DLTISVT  V+G+ DG+AVLP+KL +DVVRS+R G VDV+V+DDDARIVA+PSEFAIR++PAD+FP+L  P G AVTLDAAAF+ A+ QV  AASSDDARPILTGVLMAAE DGLRLV+TDSYRL+VRDL GTSVLGEGQ VLVPSRAL EL RV+G+   +TLRLGDRDA FEVG V+V TRLIEG+FPNYRGLIP NHPN+LTV R  LL+AV+RVRLLAQESTPVR+AMSADGLELVAVTQD+GQAHE+V  A Y G DLTVAFNPEYL+DGIE A GDEITLETVDELKPAL++S  D ++LYLLMPVRVS
Sbjct:    5 CERDVLVEALGAAGRAVTTRG-ALPVLQGVHLELSGDRLRVTGSDLDLTISVTATVAGNSDGVAVLPAKLVTDVVRSLRPGAVDVSVDDDDARIVAAPSEFAIRVVPADDFPQLPEPDGDAVTLDAAAFREALRQVVPAASSDDARPILTGVLMAAEADGLRLVATDSYRLAVRDLPGTSVLGEGQHVLVPSRALTELGRVIGDGTDLTLRLGDRDARFEVGDVTVATRLIEGDFPNYRGLIPQNHPNRLTVPRDDLLEAVKRVRLLAQESTPVRLAMSADGLELVAVTQDIGQAHESVP-ARYEGTDLTVAFNPEYLLDGIEAAGGDEITLETVDELKPALIRSVGDDSYLYLLMPVRVS 363          
BLAST of mRNA_M-pyrifera_M_contig65793.15979.1 vs. uniprot
Match: A0A6B1B0Y2_9ACTN (Beta sliding clamp n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1B0Y2_9ACTN)

HSP 1 Score: 458 bits (1179), Expect = 8.730e-159
Identity = 250/361 (69.25%), Postives = 285/361 (78.95%), Query Frame = 1
Query:    1 CERDVLAKALADAGRAVTTRGGALPVLAGVXXXXXXXXXXXXXXXXDLTISVTIEVSGSEDGIAVLPSKLASDVVRSVRAGGVDVTVEDDDARIVASPSEFAIRIIPADEFPELAAPSGSAVTLDAAAFKAAIEQVEKAASSDDARPILTGVLMAAEEDGLRLVSTDSYRLSVRDLAGTSVLGEGQKVLVPSRALKELARVVGEEESITLRLGDRDAGFEVGSVSVTTRLIEGEFPNYRGLIPTNHPNQLTVDRTTLLDAVRRVRLLAQESTPVRMAMSADGLELVAVTQDVGQAHEAVEEATYNGEDLTVAFNPEYLIDGIEVAPGDEITLETVDELKPALLKSSEDPNFLYLLMPVRVS 1083
            CERDVL+ AL  AGR V  RGG   V+ GV                DLTIS         DG+ V+ SKL +DVVRS+R G VDV +ED DARIVA+PSEF+IR+I  D+FPE+  P+G  VTLDA+ FKAAIEQV KAASSDDARPILTGVLMAAE  GLRLVSTDSYRL+V D+ G SVLGEGQKVLVPSRALKELAR+VGEEE ITL LG+ +A F VGSV++TTRLIEG+FPNY  LIP  H N+LT+DR  LLDA+RRVRLLAQESTP+RM+MSA+GLE+ AVTQ+VG+AHEA+E A Y GE L VAFNPEYLIDGIEV+PG E+ LET+ ELKPALLKSSEDPNFLYLLMPVRVS
Sbjct:    5 CERDVLSDALNVAGRGVAARGGTA-VIGGVRLELAGDQLTATGSDGDLTISXXXXXXXXGDGVTVMRSKLMADVVRSLRPGAVDVMIEDQDARIVANPSEFSIRVIATDDFPEIPEPAGDVVTLDASVFKAAIEQVGKAASSDDARPILTGVLMAAESGGLRLVSTDSYRLAVCDIEGLSVLGEGQKVLVPSRALKELARIVGEEEEITLSLGEHNASFSVGSVTITTRLIEGDFPNYNRLIPDIHENRLTIDREKLLDALRRVRLLAQESTPIRMSMSAEGLEVAAVTQEVGEAHEALE-AEYQGESLMVAFNPEYLIDGIEVSPGSEVMLETLGELKPALLKSSEDPNFLYLLMPVRVS 363          
BLAST of mRNA_M-pyrifera_M_contig65793.15979.1 vs. uniprot
Match: A0A432JIK0_9ACTN (Beta sliding clamp n=3 Tax=Bacteria TaxID=2 RepID=A0A432JIK0_9ACTN)

HSP 1 Score: 433 bits (1113), Expect = 9.610e-149
Identity = 222/361 (61.50%), Postives = 282/361 (78.12%), Query Frame = 1
Query:    1 CERDVLAKALADAGRAVTTRGGALPVLAGVXXXXXXXXXXXXXXXXDLTISVTIEVSGSEDGIAVLPSKLASDVVRSVRAGGVDVTVEDDDARIVASPSEFAIRIIPADEFPELAAPSGSAVTLDAAAFKAAIEQVEKAASSDDARPILTGVLMAAEEDGLRLVSTDSYRLSVRDLAGTSVLGEGQKVLVPSRALKELARVVGEEESITLRLGDRDAGFEVGSVSVTTRLIEGEFPNYRGLIPTNHPNQLTVDRTTLLDAVRRVRLLAQESTPVRMAMSADGLELVAVTQDVGQAHEAVEEATYNGEDLTVAFNPEYLIDGIEVAPGDEITLETVDELKPALLKSSEDPNFLYLLMPVRVS 1083
            CERDVL +A +   RAV++RGG  PVL+G+                DLTI V   V G EDG AVLP+KLA+D+VR++ +G V++ V+++ ARI +  S+F++R++ ADEFP   AP G AVTLDA +   A+EQV KAAS DD+RPILTGVL+AAE+DGLR V+TDSYRL+VRDL GTS+LG  Q VLVPSRAL+   R++G+ + +T+RL +R+A FEVG V++ TRLIEGEFPNYRGLIPT+HPN L VDRT L+DAVRRV LLA+++TPVR+AM+ DGLEL+A+TQDVGQAHE V+ ATY G DLTVAFNP YL+DG+EV+PGDE+ LET+D LKPA+++S  D  FLYLLMPVRVS
Sbjct:    5 CERDVLDRAFSITSRAVSSRGGVQPVLSGLHLELTGNRLSVVGSDLDLTIRVDAAVGGHEDGAAVLPAKLATDIVRALDSGQVEIAVDEEGARITSGRSDFSLRVMAADEFPRFEAPGGEAVTLDAESVATALEQVVKAASGDDSRPILTGVLLAAEDDGLRFVATDSYRLAVRDLPGTSILGRDQTVLVPSRALEVTGRLLGDADELTIRLDEREASFEVGDVTIVTRLIEGEFPNYRGLIPTDHPNALVVDRTALIDAVRRVGLLAKDATPVRLAMTGDGLELIAITQDVGQAHETVD-ATYEGSDLTVAFNPGYLLDGLEVSPGDEVRLETIDSLKPAVIRSVGDDGFLYLLMPVRVS 364          
BLAST of mRNA_M-pyrifera_M_contig65793.15979.1 vs. uniprot
Match: A0A6G0A443_9ACTN (Beta sliding clamp n=2 Tax=Bacteria TaxID=2 RepID=A0A6G0A443_9ACTN)

HSP 1 Score: 431 bits (1107), Expect = 7.830e-148
Identity = 224/361 (62.05%), Postives = 281/361 (77.84%), Query Frame = 1
Query:    1 CERDVLAKALADAGRAVTTRGGALPVLAGVXXXXXXXXXXXXXXXXDLTISVTIEVSGSEDGIAVLPSKLASDVVRSVRAGGVDVTVEDDDARIVASPSEFAIRIIPADEFPELAAPSGSAVTLDAAAFKAAIEQVEKAASSDDARPILTGVLMAAEEDGLRLVSTDSYRLSVRDLAGTSVLGEGQKVLVPSRALKELARVVGEEESITLRLGDRDAGFEVGSVSVTTRLIEGEFPNYRGLIPTNHPNQLTVDRTTLLDAVRRVRLLAQESTPVRMAMSADGLELVAVTQDVGQAHEAVEEATYNGEDLTVAFNPEYLIDGIEVAPGDEITLETVDELKPALLKSSEDPNFLYLLMPVRVS 1083
            CERDVL  AL   GRAV+ RGGALPVL+G+                DLTISV++ V+GS DG AV+P+KLA+D+ R++  G V +  +D++A I A  SEF++ + PA+EFP LA P+G +VTL+AA F   + QV  AAS+DD+RPILTGVL+AAE DGLRLV+TDSYRL+VRDL G SVL EGQ+VLVPSRAL EL R +G+   + L LG+RDA F++G+  +TTRLIEGEFPNY GLIPT+ PN+LTV RT L+DA+RRV+LLA+E+TPVR+ M  D LEL+A+TQDVGQAHE ++ A Y G DLTVAFNPEYL+DG+EV PGDE+TLETVD LKPAL++S+E  +FLYLLMPVRVS
Sbjct:    5 CERDVLVDALTTTGRAVSGRGGALPVLSGIRFALEDDALVMTGSDLDLTISVSLTVAGSTDGSAVIPAKLAADIARALEPGAVQIEAKDNEAIITAGRSEFSVHLAPAEEFPHLAGPTGKSVTLNAAEFSEGLRQVVPAASADDSRPILTGVLLAAEADGLRLVATDSYRLAVRDLPGASVLEEGQEVLVPSRALGELTRALGDAAEVVLVLGERDATFDIGATRLTTRLIEGEFPNYTGLIPTSQPNRLTVGRTPLIDAMRRVKLLAREATPVRLVMQPDRLELIAITQDVGQAHEELD-AKYEGSDLTVAFNPEYLLDGLEVTPGDEVTLETVDALKPALIRSAEAVDFLYLLMPVRVS 364          
BLAST of mRNA_M-pyrifera_M_contig65793.15979.1 vs. uniprot
Match: UPI001E580B45 (DNA polymerase III subunit beta n=2 Tax=Rhabdothermincola sp. EGI L10124 TaxID=2903142 RepID=UPI001E580B45)

HSP 1 Score: 430 bits (1105), Expect = 1.580e-147
Identity = 231/361 (63.99%), Postives = 282/361 (78.12%), Query Frame = 1
Query:    1 CERDVLAKALADAGRAVTTRGGALPVLAGVXXXXXXXXXXXXXXXXDLTISVTIEVSGSEDGIAVLPSKLASDVVRSVRAGGVDVTVEDDDARIVASPSEFAIRIIPADEFPELAAPSGSAVTLDAAAFKAAIEQVEKAASSDDARPILTGVLMAAEEDGLRLVSTDSYRLSVRDLAGTSVLGEGQKVLVPSRALKELARVVGEEESITLRLGDRDAGFEVGSVSVTTRLIEGEFPNYRGLIPTNHPNQLTVDRTTLLDAVRRVRLLAQESTPVRMAMSADGLELVAVTQDVGQAHEAVEEATYNGEDLTVAFNPEYLIDGIEVAPGDEITLETVDELKPALLKSSEDPNFLYLLMPVRVS 1083
            CERD L  AL  AGRAVT+RG +LPVL+G+                DLTISV   VSG  DG+AV+PSKL  D+ R++  G V V V D++ARI +  S+FA+R IPA EFP+L  P+  +V LDAA F  A+ QV  AAS+D++RPILTGVL+AAE DGLRLV+TDSYRL+VRDL GTSVL EGQ+VLVPS ALKEL+R++G  E++TLRLG+RD  FEVG V VT+RLIEG+FPNYRGLIP++ PNQL V R  LL+A+RRVRLLA+E+TPVR+ MSAD LEL+A+TQDVGQA E ++ A Y+G +LTVAFNPEYLI GIEV PGDEITLET+D LKPAL+K+ + P+FLYLLMPVRVS
Sbjct:    5 CERDPLVDALNAAGRAVTSRGSSLPVLSGLRLEVKGDQLSVTGSDLDLTISVRAAVSGETDGVAVVPSKLLGDISRALPPGAVTVEVTDEEARISSGRSQFAVRTIPAQEFPQLPEPAERSVDLDAAGFADALRQVVSAASNDESRPILTGVLLAAEGDGLRLVATDSYRLAVRDLPGTSVLDEGQQVLVPSTALKELSRLLGSAETVTLRLGERDVAFEVGDVRVTSRLIEGDFPNYRGLIPSSQPNQLRVGRDALLEALRRVRLLAREATPVRLVMSADTLELLAITQDVGQAREELD-AKYSGNELTVAFNPEYLIAGIEVTPGDEITLETIDALKPALVKAVDSPDFLYLLMPVRVS 364          
BLAST of mRNA_M-pyrifera_M_contig65793.15979.1 vs. uniprot
Match: A0A7W0KPY2_9ACTN (Beta sliding clamp n=2 Tax=Acidimicrobiia TaxID=84992 RepID=A0A7W0KPY2_9ACTN)

HSP 1 Score: 429 bits (1102), Expect = 4.660e-147
Identity = 246/362 (67.96%), Postives = 294/362 (81.22%), Query Frame = 1
Query:    1 CERDVLAKALADAGRAVTTRGGALPVLAGVXXXXXXXXXXXXXXXXDLTISVTIEVSGSEDGIAVLPSKLASDVVRSVRAGGVDVTVEDDDARIVASPSEFAIRIIPADEFPELAAPSGSAVTLDAAAFKAAIEQVEKAASSDDARPILTGVLMAAEEDGLRLVSTDSYRLSVRDLAGTSVLGEGQKVLVPSRALKELARVVGEEESITLRLGDRDAGFEVGSVSVTTRLIEGEFPNYRGLIPTNHPNQLTVDRTTLLDAVRRVRLLAQE-STPVRMAMSADGLELVAVTQDVGQAHEAVEEATYNGEDLTVAFNPEYLIDGIEVAPGDEITLETVDELKPALLKSSEDPNFLYLLMPVRVS 1083
            CERD L +AL  AGRAV  RGGALPVL+GV  XXXXXXXXXXXXXX  TI V ++V+G  DG+AVLPS++ASD+VRS+    V+V VE D+A I A   E ++R++PADEFP LA P+  AVTL A  F AA+ QV  AAS+DDARPILTGVL+AAE DGLRLV+TDSYRL+VRDL GT+VL EGQ VLVPSRAL+EL R++G  E ITLRLGDR+A FEV    +TTRLIEGEFPNYRGLIP +HPN+LTV R  L++AVRRV+L+A+E +TPVR+AMS DGLELVA+TQDVGQAHE ++ A Y GEDLTVAFNP+YL+ G+EV PGDEITL+TVD  KPA+++S+    FLYLLMPVRVS
Sbjct:    5 CERDTLVEALGAAGRAVANRGGALPVLSGVRAXXXXXXXXXXXXXXXXTIEVELDVAGERDGVAVLPSRIASDLVRSLGDPRVEVVVEGDEANITAGRFESSLRLLPADEFPRLAMPADDAVTLVAKDFAAALHQVVPAASADDARPILTGVLLAAEGDGLRLVATDSYRLAVRDLPGTTVLREGQSVLVPSRALRELERLLGSAEEITLRLGDREAAFEVDQTRLTTRLIEGEFPNYRGLIPASHPNRLTVGREALVEAVRRVKLMAREPNTPVRLAMSGDGLELVAITQDVGQAHEQLD-AGYEGEDLTVAFNPDYLLSGVEVTPGDEITLDTVDAQKPAVIRSAGAQEFLYLLMPVRVS 365          
BLAST of mRNA_M-pyrifera_M_contig65793.15979.1 vs. uniprot
Match: A0A7X7HR44_9ACTN (Beta sliding clamp n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7X7HR44_9ACTN)

HSP 1 Score: 426 bits (1095), Expect = 5.380e-146
Identity = 246/362 (67.96%), Postives = 293/362 (80.94%), Query Frame = 1
Query:    1 CERDVLAKALADAGRAVTTRGGALPVLAGVXXXXXXXXXXXXXXXXDLTISVTIEVSGSEDGIAVLPSKLASDVVRSVRAGGVDVTVEDDDARIVASPSEFAIRIIPADEFPELAAPSGSAVTLDAAAFKAAIEQVEKAASSDDARPILTGVLMAAEEDGLRLVSTDSYRLSVRDLAGTSVLGEGQKVLVPSRALKELARVVGEEESITLRLGDRDAGFEVGSVSVTTRLIEGEFPNYRGLIPTNHPNQLTVDRTTLLDAVRRVRLLAQE-STPVRMAMSADGLELVAVTQDVGQAHEAVEEATYNGEDLTVAFNPEYLIDGIEVAPGDEITLETVDELKPALLKSSEDPNFLYLLMPVRVS 1083
            CERD L  AL  AGRAV  RGGALPVLAGV   XXXXXXXXXXXXX LTI   IEV+G  DG+AVLPS++A DV +S+    V+V+ E D+A I A   E +IR++PADEFP LA P+  AVTL A  F +A+ QV  AAS+DDARPILTGVL+AAE  GLRLV+TDSYRL+VRDL G SV+GEGQ VLVPSRALKEL R++G  E ITLRLG+R+A FEVG + +TTRLIEGEFPNYRGLIP +HPNQLTV R  L++AVRRV+L+A+E +TPVR+AMSADGLELVA+TQDVGQAHE V+ A Y+GE+LTVAFNP+YL+ G+EV+PGDEITL TVD  KPA++++    +FLYLLMPVRVS
Sbjct:    5 CERDTLVDALGAAGRAVANRGGALPVLAGVRAEXXXXXXXXXXXXXXLTIETEIEVAGDVDGVAVLPSRIALDVTKSLGDPRVEVSCEGDEAHIRAGRFESSIRLLPADEFPRLAMPADDAVTLAANDFASALHQVVPAASADDARPILTGVLLAAEAGGLRLVATDSYRLAVRDLPGASVMGEGQSVLVPSRALKELERLLGSAEEITLRLGEREASFEVGGLRLTTRLIEGEFPNYRGLIPASHPNQLTVGREVLVEAVRRVKLMAREPNTPVRLAMSADGLELVAITQDVGQAHEQVD-AGYSGEELTVAFNPDYLLSGVEVSPGDEITLFTVDAQKPAVIRAQGAEDFLYLLMPVRVS 365          
BLAST of mRNA_M-pyrifera_M_contig65793.15979.1 vs. uniprot
Match: A0A2E9W2I3_9ACTN (Beta sliding clamp n=5 Tax=Actinobacteria TaxID=201174 RepID=A0A2E9W2I3_9ACTN)

HSP 1 Score: 425 bits (1092), Expect = 1.480e-145
Identity = 219/361 (60.66%), Postives = 281/361 (77.84%), Query Frame = 1
Query:    1 CERDVLAKALADAGRAVTTRGGALPVLAGVXXXXXXXXXXXXXXXXDLTISVTIEVSGSEDGIAVLPSKLASDVVRSVRAGGVDVTVEDDDARIVASPSEFAIRIIPADEFPELAAPSGSAVTLDAAAFKAAIEQVEKAASSDDARPILTGVLMAAEEDGLRLVSTDSYRLSVRDLAGTSVLGEGQKVLVPSRALKELARVVGEEESITLRLGDRDAGFEVGSVSVTTRLIEGEFPNYRGLIPTNHPNQLTVDRTTLLDAVRRVRLLAQESTPVRMAMSADGLELVAVTQDVGQAHEAVEEATYNGEDLTVAFNPEYLIDGIEVAPGDEITLETVDELKPALLKSSEDPNFLYLLMPVRVS 1083
            CERDVL +A + AGRA++ RG A PV++G+                DLTI V  +V G E+G+AVLP+KLA+D+VRS+ +G + VTV+DD A +VA  S+F +R +  DEFP+   P G AVTLDA +  AA+EQV KAAS DD+RPILTGV++AAE DGLR V+TDSYRL+VRDL GTSVLG  Q VLVPSRAL+   R++G+ E +T+RL DR+A F V  V++ TRLIEGEFPNYRGLIP++HPN L VDR  L+DAVRRV LLA+++TPVR+AMS+DGLEL+A+TQDVGQAHE ++ +TY+G++L VAFNP YL+DG+EV+PGDE+ LET+D LKPA+++S  D  FLYLLMPVRVS
Sbjct:    5 CERDVLDRAFSTAGRAISNRGSAPPVMSGLHLHLVGDNLAVVGSDLDLTIRVDSKVGGQENGVAVLPAKLAADIVRSLDSGQITVTVDDDGAHLVAGRSDFNLRTMSVDEFPKFEEPGGDAVTLDAESVSAALEQVVKAASGDDSRPILTGVMLAAEGDGLRFVATDSYRLAVRDLPGTSVLGRDQTVLVPSRALEVTGRLLGDAEELTIRLADREASFVVDDVTIVTRLIEGEFPNYRGLIPSDHPNTLVVDRVALIDAVRRVGLLARDATPVRLAMSSDGLELIAITQDVGQAHETLD-STYDGKELKVAFNPGYLLDGLEVSPGDEVRLETIDALKPAVIRSVADEGFLYLLMPVRVS 364          
BLAST of mRNA_M-pyrifera_M_contig65793.15979.1 vs. uniprot
Match: A0A538DEM6_9ACTN (Beta sliding clamp n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538DEM6_9ACTN)

HSP 1 Score: 419 bits (1078), Expect = 1.980e-143
Identity = 218/361 (60.39%), Postives = 277/361 (76.73%), Query Frame = 1
Query:    1 CERDVLAKALADAGRAVTTRGGALPVLAGVXXXXXXXXXXXXXXXXDLTISVTIEVSGSEDGIAVLPSKLASDVVRSVRAGGVDVTVEDDDARIVASPSEFAIRIIPADEFPELAAPSGSAVTLDAAAFKAAIEQVEKAASSDDARPILTGVLMAAEEDGLRLVSTDSYRLSVRDLAGTSVLGEGQKVLVPSRALKELARVVGEEESITLRLGDRDAGFEVGSVSVTTRLIEGEFPNYRGLIPTNHPNQLTVDRTTLLDAVRRVRLLAQESTPVRMAMSADGLELVAVTQDVGQAHEAVEEATYNGEDLTVAFNPEYLIDGIEVAPGDEITLETVDELKPALLKSSEDPNFLYLLMPVRVS 1083
            CERDVL  AL  AGRAV++RGG+LPVL+G+                DLTI+V   V+G  DG+AVLP+KLASD+VRS +AG V   V+ D A++    S+F++R++PADE+P      G   T+++     A++QV  AASSDD+RPILTGVLMAAE DG+R V+TDSYRL+VRD++G +VL EGQ VLVPSRAL EL R +   + + L LG RDA F VG V ++TRLIEGEFPNYRGLIP NHPN+LTVDR + LDA+RRVRL+AQE+TPVR+AM +DGLEL+A+TQD+GQAHE ++ A Y+G++LTVAFNP+YL+DG+EV  G++ITLETVD LKPA+L+SS D  FLYLLMPVRVS
Sbjct:    5 CERDVLLDALTTAGRAVSSRGGSLPVLSGLLVELTGDNLRVTGSDLDLTITVERVVNGERDGVAVLPAKLASDIVRSFKAGAVHFDVDGDQAQVSVDRSDFSLRLMPADEYPRFERAQGDPFTIESDKLSVALKQVVPAASSDDSRPILTGVLMAAEADGIRFVATDSYRLAVRDISGEAVLKEGQHVLVPSRALNELTRTLHSGKEVNLLLGQRDASFSVGGVQLSTRLIEGEFPNYRGLIPKNHPNKLTVDRDSFLDALRRVRLMAQEATPVRVAMRSDGLELIAITQDIGQAHEDLD-AEYDGQELTVAFNPQYLLDGVEVCAGEKITLETVDALKPAVLRSSGDDEFLYLLMPVRVS 364          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig65793.15979.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2D8GI67_9ACTN6.650e-19480.06Beta sliding clamp n=6 Tax=Acidimicrobiaceae bacte... [more]
A0A3M2GJQ5_ACTSX3.150e-17373.96Beta sliding clamp n=1 Tax=Actinomyces sp. TaxID=2... [more]
A0A6B1B0Y2_9ACTN8.730e-15969.25Beta sliding clamp n=1 Tax=Acidimicrobiaceae bacte... [more]
A0A432JIK0_9ACTN9.610e-14961.50Beta sliding clamp n=3 Tax=Bacteria TaxID=2 RepID=... [more]
A0A6G0A443_9ACTN7.830e-14862.05Beta sliding clamp n=2 Tax=Bacteria TaxID=2 RepID=... [more]
UPI001E580B451.580e-14763.99DNA polymerase III subunit beta n=2 Tax=Rhabdother... [more]
A0A7W0KPY2_9ACTN4.660e-14767.96Beta sliding clamp n=2 Tax=Acidimicrobiia TaxID=84... [more]
A0A7X7HR44_9ACTN5.380e-14667.96Beta sliding clamp n=1 Tax=Acidimicrobiales bacter... [more]
A0A2E9W2I3_9ACTN1.480e-14560.66Beta sliding clamp n=5 Tax=Actinobacteria TaxID=20... [more]
A0A538DEM6_9ACTN1.980e-14360.39Beta sliding clamp n=1 Tax=Actinomycetia bacterium... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig65793contigM-pyrifera_M_contig65793:232..1317 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score389.0
Seed ortholog evalue2.4e-105
Seed eggNOG ortholog1229780.BN381_100168
Preferred namednaN
KEGG rclassRC02795
KEGG koko:K02338
KEGG ReactionR00375,R00376,R00377,R00378
KEGG Pathwayko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440
KEGG ModuleM00260
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944
EggNOG free text desc.Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
EggNOG OGs2GJK3@201174,3UWB4@52018,COG0592@1,COG0592@2
EC2.7.7.7
COG Functional cat.L
Best tax levelunclassified Actinobacteria (class)
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03032,ko03400
Exons1
Model size1086
Cds size1086
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816546.1917963-CDS-M-pyrifera_M_contig65793:231..13171622816546.1917963-CDS-M-pyrifera_M_contig65793:231..1317Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig65793 232..1317 -
1692278038.9430912-CDS-M-pyrifera_M_contig65793:231..13171692278038.9430912-CDS-M-pyrifera_M_contig65793:231..1317Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig65793 232..1317 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig65793.15979.1prot_M-pyrifera_M_contig65793.15979.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig65793 232..1317 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig65793.15979.1

>prot_M-pyrifera_M_contig65793.15979.1 ID=prot_M-pyrifera_M_contig65793.15979.1|Name=mRNA_M-pyrifera_M_contig65793.15979.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=362bp
CERDVLAKALADAGRAVTTRGGALPVLAGVRLELAGDQLTITGSDLDLTI
SVTIEVSGSEDGIAVLPSKLASDVVRSVRAGGVDVTVEDDDARIVASPSE
FAIRIIPADEFPELAAPSGSAVTLDAAAFKAAIEQVEKAASSDDARPILT
GVLMAAEEDGLRLVSTDSYRLSVRDLAGTSVLGEGQKVLVPSRALKELAR
VVGEEESITLRLGDRDAGFEVGSVSVTTRLIEGEFPNYRGLIPTNHPNQL
TVDRTTLLDAVRRVRLLAQESTPVRMAMSADGLELVAVTQDVGQAHEAVE
EATYNGEDLTVAFNPEYLIDGIEVAPGDEITLETVDELKPALLKSSEDPN
FLYLLMPVRVS*
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mRNA from alignment at M-pyrifera_M_contig65793:232..1317-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig65793.15979.1 ID=mRNA_M-pyrifera_M_contig65793.15979.1|Name=mRNA_M-pyrifera_M_contig65793.15979.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1086bp|location=Sequence derived from alignment at M-pyrifera_M_contig65793:232..1317- (Macrocystis pyrifera P11B4 male)
TGCGAACGAGATGTTCTCGCCAAAGCACTCGCCGACGCGGGACGCGCCGT CACCACCCGAGGCGGAGCTCTTCCCGTCCTCGCCGGTGTGCGGCTCGAAC TCGCCGGCGATCAGCTCACCATCACCGGTAGCGACCTCGACCTGACCATC TCGGTCACCATCGAGGTCTCCGGCAGCGAAGATGGCATCGCAGTGCTTCC CTCGAAGCTGGCATCCGATGTCGTTCGTTCGGTGCGCGCCGGCGGCGTCG ACGTCACGGTCGAAGACGATGACGCCCGCATCGTTGCGTCGCCCTCGGAG TTCGCGATCCGCATCATCCCGGCCGATGAGTTCCCGGAGCTCGCGGCTCC GTCCGGTTCGGCTGTCACCCTCGATGCCGCCGCATTCAAGGCCGCCATCG AACAGGTCGAGAAGGCCGCATCGTCCGACGATGCCCGGCCGATCCTCACC GGTGTGCTCATGGCCGCCGAAGAAGACGGTCTTCGCCTCGTTTCCACCGA TTCCTATCGCCTCTCGGTGCGTGATCTGGCCGGCACCTCGGTGCTCGGCG AAGGTCAGAAGGTCCTGGTGCCCAGTCGGGCGCTCAAGGAGCTTGCTCGT GTCGTCGGTGAGGAAGAGAGCATCACGTTGCGTCTCGGCGACCGCGACGC CGGGTTCGAGGTCGGCAGTGTGTCGGTCACCACCCGCCTGATCGAGGGTG AGTTCCCGAACTATCGAGGTCTCATCCCCACGAACCATCCCAACCAGCTC ACCGTCGATCGCACCACCCTGCTCGATGCGGTGCGTCGTGTGCGCCTGCT CGCGCAGGAGTCCACGCCGGTGCGGATGGCGATGTCGGCCGATGGGCTCG AGCTCGTTGCCGTCACCCAGGACGTGGGTCAAGCCCACGAGGCGGTCGAG GAAGCGACCTACAACGGCGAAGATCTCACAGTGGCCTTCAACCCGGAGTA CCTGATCGACGGTATCGAGGTGGCGCCGGGCGACGAGATCACCCTCGAGA CGGTCGACGAGCTGAAGCCGGCATTGTTGAAGTCGTCCGAGGATCCCAAC TTCCTCTATCTGCTCATGCCGGTGCGCGTCAGCTGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig65793:232..1317-

>mRNA_M-pyrifera_M_contig65793.15979.1 ID=mRNA_M-pyrifera_M_contig65793.15979.1|Name=mRNA_M-pyrifera_M_contig65793.15979.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2172bp|location=Sequence derived from alignment at M-pyrifera_M_contig65793:232..1317- (Macrocystis pyrifera P11B4 male)
TGCGAACGAGATGTTCTCGCCAAAGCACTCGCCGACGCGGGACGCGCCGT
CACCACCCGAGGCGGAGCTCTTCCCGTCCTCGCCGGTGTGCGGCTCGAAC
TCGCCGGCGATCAGCTCACCATCACCGGTAGCGACCTCGACCTGACCATC
TCGGTCACCATCGAGGTCTCCGGCAGCGAAGATGGCATCGCAGTGCTTCC
CTCGAAGCTGGCATCCGATGTCGTTCGTTCGGTGCGCGCCGGCGGCGTCG
ACGTCACGGTCGAAGACGATGACGCCCGCATCGTTGCGTCGCCCTCGGAG
TTCGCGATCCGCATCATCCCGGCCGATGAGTTCCCGGAGCTCGCGGCTCC
GTCCGGTTCGGCTGTCACCCTCGATGCCGCCGCATTCAAGGCCGCCATCG
AACAGGTCGAGAAGGCCGCATCGTCCGACGATGCCCGGCCGATCCTCACC
GGTGTGCTCATGGCCGCCGAAGAAGACGGTCTTCGCCTCGTTTCCACCGA
TTCCTATCGCCTCTCGGTGCGTGATCTGGCCGGCACCTCGGTGCTCGGCG
AAGGTCAGAAGGTCCTGGTGCCCAGTCGGGCGCTCAAGGAGCTTGCTCGT
GTCGTCGGTGAGGAAGAGAGCATCACGTTGCGTCTCGGCGACCGCGACGC
CGGGTTCGAGGTCGGCAGTGTGTCGGTCACCACCCGCCTGATCGAGGGTG
AGTTCCCGAACTATCGAGGTCTCATCCCCACGAACCATCCCAACCAGCTC
ACCGTCGATCGCACCACCCTGCTCGATGCGGTGCGTCGTGTGCGCCTGCT
CGCGCAGGAGTCCACGCCGGTGCGGATGGCGATGTCGGCCGATGGGCTCG
AGCTCGTTGCCGTCACCCAGGACGTGGGTCAAGCCCACGAGGCGGTCGAG
GAAGCGACCTACAACGGCGAAGATCTCACAGTGGCCTTCAACCCGGAGTA
CCTGATCGACGGTATCGAGGTGGCGCCGGGCGACGAGATCACCCTCGAGA
CGGTCGACGAGCTGAAGCCGGCATTGTTGAAGTCGTCCGAGGATCCCAAC
TTCCTCTATCTGCTCATGCCGGTGCGCGTCAGCTGATGCGAACGAGATGT
TCTCGCCAAAGCACTCGCCGACGCGGGACGCGCCGTCACCACCCGAGGCG
GAGCTCTTCCCGTCCTCGCCGGTGTGCGGCTCGAACTCGCCGGCGATCAG
CTCACCATCACCGGTAGCGACCTCGACCTGACCATCTCGGTCACCATCGA
GGTCTCCGGCAGCGAAGATGGCATCGCAGTGCTTCCCTCGAAGCTGGCAT
CCGATGTCGTTCGTTCGGTGCGCGCCGGCGGCGTCGACGTCACGGTCGAA
GACGATGACGCCCGCATCGTTGCGTCGCCCTCGGAGTTCGCGATCCGCAT
CATCCCGGCCGATGAGTTCCCGGAGCTCGCGGCTCCGTCCGGTTCGGCTG
TCACCCTCGATGCCGCCGCATTCAAGGCCGCCATCGAACAGGTCGAGAAG
GCCGCATCGTCCGACGATGCCCGGCCGATCCTCACCGGTGTGCTCATGGC
CGCCGAAGAAGACGGTCTTCGCCTCGTTTCCACCGATTCCTATCGCCTCT
CGGTGCGTGATCTGGCCGGCACCTCGGTGCTCGGCGAAGGTCAGAAGGTC
CTGGTGCCCAGTCGGGCGCTCAAGGAGCTTGCTCGTGTCGTCGGTGAGGA
AGAGAGCATCACGTTGCGTCTCGGCGACCGCGACGCCGGGTTCGAGGTCG
GCAGTGTGTCGGTCACCACCCGCCTGATCGAGGGTGAGTTCCCGAACTAT
CGAGGTCTCATCCCCACGAACCATCCCAACCAGCTCACCGTCGATCGCAC
CACCCTGCTCGATGCGGTGCGTCGTGTGCGCCTGCTCGCGCAGGAGTCCA
CGCCGGTGCGGATGGCGATGTCGGCCGATGGGCTCGAGCTCGTTGCCGTC
ACCCAGGACGTGGGTCAAGCCCACGAGGCGGTCGAGGAAGCGACCTACAA
CGGCGAAGATCTCACAGTGGCCTTCAACCCGGAGTACCTGATCGACGGTA
TCGAGGTGGCGCCGGGCGACGAGATCACCCTCGAGACGGTCGACGAGCTG
AAGCCGGCATTGTTGAAGTCGTCCGAGGATCCCAACTTCCTCTATCTGCT
CATGCCGGTGCGCGTCAGCTGA
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