mRNA_M-pyrifera_M_contig65743.15967.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig65743.15967.1
Unique NamemRNA_M-pyrifera_M_contig65743.15967.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig65743.15967.1 vs. uniprot
Match: A0A6H5KIW4_9PHAE (Amino-acid N-acetyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIW4_9PHAE)

HSP 1 Score: 110 bits (276), Expect = 7.850e-27
Identity = 51/64 (79.69%), Postives = 60/64 (93.75%), Query Frame = 1
Query:    7 VKAAAGFVRIEVESALTRGGRGGNSGSLHVSGGNYYSAQPIGVRDGLDYGCTGEVRKVEADKIR 198
            +KAAAGFVRIEVESAL+RG RGG +G  HV+GGN++SAQP+GVRDG+DYGCTGEVRKVEAD+IR
Sbjct:  288 IKAAAGFVRIEVESALSRGARGGTAGDFHVAGGNFFSAQPVGVRDGVDYGCTGEVRKVEADRIR 351          
BLAST of mRNA_M-pyrifera_M_contig65743.15967.1 vs. uniprot
Match: D7FJG3_ECTSI (Amino-acid N-acetyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJG3_ECTSI)

HSP 1 Score: 110 bits (274), Expect = 8.810e-27
Identity = 51/64 (79.69%), Postives = 60/64 (93.75%), Query Frame = 1
Query:    7 VKAAAGFVRIEVESALTRGGRGGNSGSLHVSGGNYYSAQPIGVRDGLDYGCTGEVRKVEADKIR 198
            +KAAAGFVRIEVESAL+RG RGG +G  HV+GGN++SAQP+GVRDG+DYGCTGEVRKVEAD+IR
Sbjct:  109 IKAAAGFVRIEVESALSRGARGGAAGDFHVAGGNFFSAQPVGVRDGVDYGCTGEVRKVEADRIR 172          
BLAST of mRNA_M-pyrifera_M_contig65743.15967.1 vs. uniprot
Match: A0A835Z6E5_9STRA (Amino-acid N-acetyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6E5_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 5.260e-19
Identity = 46/63 (73.02%), Postives = 54/63 (85.71%), Query Frame = 1
Query:   10 KAAAGFVRIEVESALTRGGRGGNSGSLHVSGGNYYSAQPIGVRDGLDYGCTGEVRKVEADKIR 198
            K AAG+VR EVE +L RG RGG S S+ VSGGN++SAQPIGVR+G+DYG TGEVR+VEADKIR
Sbjct:  141 KEAAGYVRFEVERSLMRGQRGGAS-SISVSGGNFFSAQPIGVRNGVDYGFTGEVRRVEADKIR 202          
BLAST of mRNA_M-pyrifera_M_contig65743.15967.1 vs. uniprot
Match: A0A836CM49_9STRA (Amino-acid N-acetyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM49_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 1.050e-13
Identity = 36/64 (56.25%), Postives = 48/64 (75.00%), Query Frame = 1
Query:    7 VKAAAGFVRIEVESALTRGGRGGNSGSLHVSGGNYYSAQPIGVRDGLDYGCTGEVRKVEADKIR 198
            VK  AG++R EVESAL RG  G     +  +GGN++SAQP+GVR G+DYG +GEVR+VE +KI+
Sbjct:  194 VKQCAGYMRFEVESALARGRTG--DALVQTTGGNFFSAQPVGVRSGIDYGYSGEVRRVETEKIQ 255          
BLAST of mRNA_M-pyrifera_M_contig65743.15967.1 vs. uniprot
Match: A0A7S0EIJ9_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0EIJ9_9EUKA)

HSP 1 Score: 68.9 bits (167), Expect = 2.170e-13
Identity = 37/62 (59.68%), Postives = 46/62 (74.19%), Query Frame = 1
Query:   22 GFVRIEVESALTRG--GRGGNSGSLHVSGGN-YYSAQPIGVRDGLDYGCTGEVRKVEADKIR 198
            GF R  VE+AL+RG   RG    ++ V GGN +Y+AQP+GVRDG+D G TGEVR+VE DKIR
Sbjct:   39 GFARSRVEAALSRGRGSRGAGGVAVGVVGGNLFYTAQPLGVRDGVDLGSTGEVRRVEVDKIR 100          
BLAST of mRNA_M-pyrifera_M_contig65743.15967.1 vs. uniprot
Match: A0A7S1XN44_9STRA (Amino-acid N-acetyltransferase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XN44_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 4.450e-12
Identity = 37/65 (56.92%), Postives = 47/65 (72.31%), Query Frame = 1
Query:    7 VKAAAGFVRIEVESALTRGGRG--GNSGSLHVSGGNYYSAQPIGVRDGLDYGCTGEVRKVEADKI 195
            VK AAG  R EVES L++G +   G SG   V G  +++AQP+GVRDG+DYG TGEVR+VEA +I
Sbjct:  180 VKQAAGAARFEVESMLSKGFQAIPGGSGCNVVGGSGFFTAQPVGVRDGVDYGFTGEVRRVEAARI 244          
BLAST of mRNA_M-pyrifera_M_contig65743.15967.1 vs. uniprot
Match: A0A7S0EI44_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0EI44_9EUKA)

HSP 1 Score: 67.4 bits (163), Expect = 1.530e-11
Identity = 38/63 (60.32%), Postives = 46/63 (73.02%), Query Frame = 1
Query:   22 GFVRIEVESALTRG--GRGGNSG-SLHVSGGN-YYSAQPIGVRDGLDYGCTGEVRKVEADKIR 198
            G  R  VE+AL+RG  GR    G ++ V GGN YY+AQP+GVRDG+D G TGEVR+VE DKIR
Sbjct:  195 GLARSRVEAALSRGRGGRAAGGGVAIGVVGGNLYYTAQPLGVRDGVDLGSTGEVRRVEVDKIR 257          
BLAST of mRNA_M-pyrifera_M_contig65743.15967.1 vs. uniprot
Match: A0A7S3L3Q2_9STRA (Amino-acid N-acetyltransferase n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L3Q2_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 2.130e-11
Identity = 38/72 (52.78%), Postives = 46/72 (63.89%), Query Frame = 1
Query:    7 VKAAAGFVRIEVESALTRG----GRGGNSGSLHVSG----GNYYSAQPIGVRDGLDYGCTGEVRKVEADKIR 198
            VK  AG+VR EVE  L R     G GG++G  H  G    GN+YSAQP G+ DG+DY  TG VR+VE +KIR
Sbjct:  233 VKEEAGYVRFEVERQLARSLRLQGAGGSTGKGHYDGNVVSGNFYSAQPFGILDGIDYMYTGFVRRVEVEKIR 304          
BLAST of mRNA_M-pyrifera_M_contig65743.15967.1 vs. uniprot
Match: M2Y7V5_GALSU (Amino-acid N-acetyltransferase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y7V5_GALSU)

HSP 1 Score: 65.9 bits (159), Expect = 5.410e-11
Identity = 39/69 (56.52%), Postives = 51/69 (73.91%), Query Frame = 1
Query:    1 QAVKAAAGFVRIEVESALTRGGRGGNSGSL---HVSGGNYYSAQPIGVRDGLDYGCTGEVRKVEADKIR 198
            +AVK AAGFVR E+ES L+RG    N+ +L   HV  GN+++A P GV DG+D+  TG+VRKVEA+KIR
Sbjct:  170 KAVKDAAGFVRYEIESKLSRGVF--NTPTLNKFHVVSGNFFTAIPKGVIDGVDFAYTGQVRKVEANKIR 236          
BLAST of mRNA_M-pyrifera_M_contig65743.15967.1 vs. uniprot
Match: A0A1Z5JDA8_FISSO (Amino-acid N-acetyltransferase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JDA8_FISSO)

HSP 1 Score: 65.5 bits (158), Expect = 7.060e-11
Identity = 37/65 (56.92%), Postives = 45/65 (69.23%), Query Frame = 1
Query:    7 VKAAAGFVRIEVESALTRGGRGGNSG-SLHVSGGNYYSAQPIGVRDGLDYGCTGEVRKVEADKIR 198
            VK  AG+VR EVE  L R  R  +SG   +V  GN+YSAQP+G+ DG+DY  TG VRKVE DKI+
Sbjct:   85 VKEEAGYVRFEVERELARALRLQSSGMDGNVVSGNFYSAQPLGILDGIDYEYTGFVRKVEVDKIK 149          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig65743.15967.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KIW4_9PHAE7.850e-2779.69Amino-acid N-acetyltransferase n=1 Tax=Ectocarpus ... [more]
D7FJG3_ECTSI8.810e-2779.69Amino-acid N-acetyltransferase n=1 Tax=Ectocarpus ... [more]
A0A835Z6E5_9STRA5.260e-1973.02Amino-acid N-acetyltransferase n=1 Tax=Tribonema m... [more]
A0A836CM49_9STRA1.050e-1356.25Amino-acid N-acetyltransferase n=1 Tax=Tribonema m... [more]
A0A7S0EIJ9_9EUKA2.170e-1359.68Hypothetical protein (Fragment) n=1 Tax=Phaeocysti... [more]
A0A7S1XN44_9STRA4.450e-1256.92Amino-acid N-acetyltransferase n=1 Tax=Phaeomonas ... [more]
A0A7S0EI44_9EUKA1.530e-1160.32Hypothetical protein (Fragment) n=1 Tax=Phaeocysti... [more]
A0A7S3L3Q2_9STRA2.130e-1152.78Amino-acid N-acetyltransferase n=1 Tax=Amphora cof... [more]
M2Y7V5_GALSU5.410e-1156.52Amino-acid N-acetyltransferase n=1 Tax=Galdieria s... [more]
A0A1Z5JDA8_FISSO7.060e-1156.92Amino-acid N-acetyltransferase n=1 Tax=Fistulifera... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig65743contigM-pyrifera_M_contig65743:909..1106 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score110.2
Seed ortholog evalue3.8e-22
Seed eggNOG ortholog2880.D7FJG3
Preferred nameNAGS1
KEGG rclassRC00004,RC00064
KEGG koko:K14682
KEGG ReactionR00259
KEGG Pathwayko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230
KEGG ModuleM00028
Hectar predicted targeting categoryother localisation
EggNOG free text desc.acetyl-CoA:L-glutamate N-acetyltransferase activity
EggNOG OGsCOG0548@1,KOG2436@2759
EC2.3.1.1
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons1
Model size198
Cds size198
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816545.5178843-CDS-M-pyrifera_M_contig65743:908..11061622816545.5178843-CDS-M-pyrifera_M_contig65743:908..1106Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig65743 909..1106 +
1692278038.5569012-CDS-M-pyrifera_M_contig65743:908..11061692278038.5569012-CDS-M-pyrifera_M_contig65743:908..1106Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig65743 909..1106 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig65743.15967.1prot_M-pyrifera_M_contig65743.15967.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig65743 909..1106 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig65743.15967.1

>prot_M-pyrifera_M_contig65743.15967.1 ID=prot_M-pyrifera_M_contig65743.15967.1|Name=mRNA_M-pyrifera_M_contig65743.15967.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=66bp
QAVKAAAGFVRIEVESALTRGGRGGNSGSLHVSGGNYYSAQPIGVRDGLD
YGCTGEVRKVEADKIR
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mRNA from alignment at M-pyrifera_M_contig65743:909..1106+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig65743.15967.1 ID=mRNA_M-pyrifera_M_contig65743.15967.1|Name=mRNA_M-pyrifera_M_contig65743.15967.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=198bp|location=Sequence derived from alignment at M-pyrifera_M_contig65743:909..1106+ (Macrocystis pyrifera P11B4 male)
CAGGCGGTCAAAGCGGCGGCCGGGTTCGTCCGCATCGAGGTAGAGAGCGC CTTGACTAGGGGGGGCAGGGGTGGCAACTCCGGTAGCCTTCACGTTTCTG GGGGAAACTACTACTCCGCTCAGCCGATCGGGGTTAGGGACGGGCTAGAT TATGGATGCACGGGGGAGGTGCGCAAGGTGGAAGCGGACAAGATCAGG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig65743:909..1106+

>mRNA_M-pyrifera_M_contig65743.15967.1 ID=mRNA_M-pyrifera_M_contig65743.15967.1|Name=mRNA_M-pyrifera_M_contig65743.15967.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=396bp|location=Sequence derived from alignment at M-pyrifera_M_contig65743:909..1106+ (Macrocystis pyrifera P11B4 male)
CAGGCGGTCAAAGCGGCGGCCGGGTTCGTCCGCATCGAGGTAGAGAGCGC
CTTGACTAGGGGGGGCAGGGGTGGCAACTCCGGTAGCCTTCACGTTTCTG
GGGGAAACTACTACTCCGCTCAGCCGATCGGGGTTAGGGACGGGCTAGAT
TATGGATGCACGGGGGAGGTGCGCAAGGTGGAAGCGGACAAGATCAGGCA
GGCGGTCAAAGCGGCGGCCGGGTTCGTCCGCATCGAGGTAGAGAGCGCCT
TGACTAGGGGGGGCAGGGGTGGCAACTCCGGTAGCCTTCACGTTTCTGGG
GGAAACTACTACTCCGCTCAGCCGATCGGGGTTAGGGACGGGCTAGATTA
TGGATGCACGGGGGAGGTGCGCAAGGTGGAAGCGGACAAGATCAGG
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