mRNA_M-pyrifera_M_contig65197.15865.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig65197.15865.1 vs. uniprot
Match: A0A5A8C3G3_CAFRO (Casc1_N domain-containing protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8C3G3_CAFRO) HSP 1 Score: 109 bits (273), Expect = 1.940e-23 Identity = 90/279 (32.26%), Postives = 132/279 (47.31%), Query Frame = 1
Query: 4 VGGVIAVELLEPPDETTTVKRWEMEVVGPLTNT-ILRRPHPAEGQGMEGALTVRVQVKDDILVPEDVRVAYWSGALDRWMEEEDNQVGWDTE-TRILQFKSTRCVALAMVQPRGLDLPYKSWSITPDWQYHVDSSSASEDIPSPELMAEHVLVQIETPRVNLCFRIGVDTCALVGPRDVPELSDLLQVEMRPAVLLQELSRRGILLMPTDEDAD------------ANGVKFDSPPGSGGPRG--QPTPKHAAIEQMAYQEISTVATVFAIAASNWNQR 792
V GV+ VE+L P VK + L+ + R PHP +G GM ALTV V V +L P DVRV +WS A RW+EE + + + TR LQ K+T ALA++QPR +DLP+ + S + + P + T RV L +G L+GP E + LL V +RP VLL L + G+ ++P+ DAD A V +P + P+ Q PK +E ++++++ + +A S WNQR
Sbjct: 506 VSGVLFVEVLAMPAAPRVVKSTTLIRETALSRRGVHRLPHPMQGGGMSQALTVTVAVPPTVLAPPDVRVGHWSAAQRRWVEEPEAPPPFLPDGTRELQLKTTFMTALALLQPRTVDLPFAGCRVPV-------SVGKTSGVCRPGI----------TTRVRLSIAVGPQAAWLLGPVRA-EFAHLLGVGLRPGVLLLRLRQCGLRVVPSVADADYPTVLAAADPADAAAVAAAAPGDAPKPKRTRQLIPKEQRLEAASHRQLARLGCAAVVAPSVWNQR 766
BLAST of mRNA_M-pyrifera_M_contig65197.15865.1 vs. uniprot
Match: A0A1Y1HRS3_KLENI (Casc1_N domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HRS3_KLENI) HSP 1 Score: 98.2 bits (243), Expect = 1.610e-19 Identity = 77/274 (28.10%), Postives = 124/274 (45.26%), Query Frame = 1
Query: 7 GGVIAVELLEPPDETTTVKRWEMEVVGPLTNTILRRPHP--AEGQGMEGALTVRVQVKDDILVPEDV-------RVAYWSGALDRWMEEEDNQVGWDTETRILQFKSTRCVALAMVQPRGLDLPYKSWSITPDWQYHVDSSSASEDIPSPELMAEHVLVQIETPRVNLCFRIGVDTCALVGPRDVPELSDLLQVEMRPAVLLQELSRRGILLMPTDEDADANGVKFDSPPGSGGPRGQPTPKHAAIEQMAYQEISTVATVFAIAASNWNQRARP 801
GG ++++L P VK W ++ V PL+ ++ R P+P G M G + + +++ +V +V +W W + ++V +D TR L F++T+ LA++Q R PY+SW++ P +S AS + L ++V+IE IG TC V P ++PE+SDL+ V MRP LL SRRGI L P D +A G + P +E +++ A + +S WN P
Sbjct: 300 GGTFSIDVLAVPPAPKQVKGWTLKHVTPLSTSVSRLPYPLVTPGGDMSGTMATAPPMGVSLVLAHNVVPSGTAVQVGWWDQEEQCWQTDGVSEVSYDGATRRLSFQTTKLKTLAVLQDRLRLFPYQSWTVRP-------TSEASAVLT---LQTASLVVEIE---------IGDGTCRWVSP-NLPEVSDLVGVAMRPRELLCRASRRGIHLAPEDGEALLMGREVKDP---------------LVESSLCADMAPFAVACTLGSSRWNSAPGP 538
BLAST of mRNA_M-pyrifera_M_contig65197.15865.1 vs. uniprot
Match: A0A7S3CKL6_9SPIT (Hypothetical protein n=1 Tax=Strombidium rassoulzadegani TaxID=1082188 RepID=A0A7S3CKL6_9SPIT) HSP 1 Score: 95.5 bits (236), Expect = 4.440e-19 Identity = 72/270 (26.67%), Postives = 117/270 (43.33%), Query Frame = 1
Query: 4 VGGVIAVELLEPPDETTTVKR--WEMEVVGPLTNTILRRPHPAEGQGMEGA---LTVRVQVKDDILVPEDVRVAYWSGALDRWMEEEDNQVGWDTETRILQFKSTRCVALAMVQPRGLDLPYKSWSITPDWQYHVDSSSASEDIPSPELMAEHV-LVQIETPRVNLCFRIGVDTCALVGPRDVPELSDLLQVEMRPAVLLQELSRRGILLMPTDEDADANGVKFDSPPGSGGPRGQPTPKHAAIEQMAYQEISTVATVFAIAASNWNQRA 795
VGGVI + PD+ K W + + + +T+ P+P ++ T R+ + ++++V W + W + + +D E R L FK+ + +A +QP+ D PY SW I +A+ + L+QI T R+ +C I LV D EL L+ +M P +LL+ELS+ GI L+P DEDA+ G+ K E+ A +I+ VFA + W+Q+A
Sbjct: 18 VGGVIHSRMFHYPDQDLPKKALGWTLRKIQSINDTLRCVPYPDPTSSVQTESVQTTYRLAEYVYLTEKDEIKVGVWDSDANCWSTDYIEDLNYDKEKRELNFKTRKFAPIAFLQPKTTDYPYDSWDI--------------------RCVADQLALLQINTKRIKICIEIHPLFVKLVQ-MDQKELQHLVNKQMHPGLLLKELSKCGIHLLPEDEDAERGGIHL---------------KDHETEERAILDIAQTLKVFAFQSMKWSQQA 251
BLAST of mRNA_M-pyrifera_M_contig65197.15865.1 vs. uniprot
Match: A0A7S1KKX9_9EUKA (Hypothetical protein n=1 Tax=Percolomonas cosmopolitus TaxID=63605 RepID=A0A7S1KKX9_9EUKA) HSP 1 Score: 93.6 bits (231), Expect = 6.260e-18 Identity = 77/270 (28.52%), Postives = 128/270 (47.41%), Query Frame = 1
Query: 4 VGGVIAVELLEPPDETTTVKRWEMEVVGPLTNTILRRPHP---AEGQGMEGALT-VRVQVKDDILVPEDV-RVAYWSGALDRWMEE--EDNQVGWDTETRILQFKSTRCV-ALAMVQPRGLDLPYKSWSITPDWQYHVDSSSASEDIPSPELMAEHVLVQIETPRVNLCFRIGVDTCALVGPRDVPELSDLLQVEMRPAVLLQELSRRGILLMPTDEDADANGVKFDSPPGSGGPRGQPTPKHAAIEQMAYQEISTVATVFAIAASNWNQ 789
+GG++ +++L P + K W + + L+ + R+P+ A+G ++ T V V +L+ ++V VA+W W +E + + +D E+R + F +T ALA+V R D+PY+SW I P +Y ++A I E ++ ++ I D C ++ P PEL + + P VLLQ L+ GI L+ DEDA PKH+ +EQ AY+E+S + V + A+S WNQ
Sbjct: 285 IGGIVYMDILHIPPPPSGHKGWTIRKLTSLSKRVKRKPYEQTDAQGNVVDPPSTRVSFVVPSQVLIRKEVPSVAWWDLDKKTWSQEGIDSEKTKYDPESRKITFYTTHLTTALAVVNERVFDVPYRSWFIRPLPRY--GRNAAVYTIKPCAHPTEVAYIE------DIVIFIFNDQCKMLSPLR-PELEHITSKWLEPRVLLQRLAESGINLVVGDEDAQFT---------------DRLPKHSDVEQKAYREMSWLGNVCSFASSKWNQ 530
BLAST of mRNA_M-pyrifera_M_contig65197.15865.1 vs. uniprot
Match: A0A7S0K4F5_CAFRO (Hypothetical protein (Fragment) n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0K4F5_CAFRO) HSP 1 Score: 91.3 bits (225), Expect = 9.120e-18 Identity = 54/126 (42.86%), Postives = 72/126 (57.14%), Query Frame = 1
Query: 4 VGGVIAVELLEPPDETTTVKRWEMEVVGPLTNT-ILRRPHPAEGQGMEGALTVRVQVKDDILVPEDVRVAYWSGALDRWMEEEDNQVGWDTE-TRILQFKSTRCVALAMVQPRGLDLPYKSWSITP 375
V GV+ VE+L P VK + L+ + R PHP +G GM ALTV V V +L P DVRV +WS A RW+EE + + + TR LQ K+T ALA++QPR +DLP+ WS+ P
Sbjct: 147 VSGVLFVEVLAMPAAPRVVKSTTLIRETALSRRGVHRLPHPMQGGGMSQALTVTVAVPPTVLAPPDVRVGHWSAAQRRWVEEPEAPAPFLPDGTRELQLKTTFMTALALLQPRTVDLPFAGWSLRP 272
BLAST of mRNA_M-pyrifera_M_contig65197.15865.1 vs. uniprot
Match: A0A7S3D8Y4_9EUKA (Hypothetical protein n=5 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3D8Y4_9EUKA) HSP 1 Score: 92.0 bits (227), Expect = 2.070e-17 Identity = 76/281 (27.05%), Postives = 123/281 (43.77%), Query Frame = 1
Query: 4 VGGVIAVELLEPPDETTTVKRWEMEVVGPLTNTILRRPHPA-----EGQGMEGALT-----VRVQVKDDILVPED-VRVAYWSGALDRWMEEEDNQVGWDTETRILQFKSTRCVALAMVQPRGLDLPYKSWSITPDWQYHVDSSSASEDIPSPELMAEHVLVQIETPRVNLCFRIGVDTCALVGPRDVPELSDLLQVE--MRPAVLLQELSRRGILLMPTDEDADA--NGVKFDSPPGSGGPRGQPTPKHAAIEQMAYQEISTVATVFAIAASNWN-QRAR 798
VGGV++V+++ P T+K W M I + +P+ G+GM +L+ + + D I+ D V +W+ +W E + + +D E+R+L F S LA++Q R D PY+ W P + H L +E + + C L+ P D+P+L L + PA+LL+ELS+ GI L+P D DAD + + D +E+ Y ++S +A F++A S WN QR R
Sbjct: 269 VGGVLSVDVINLPPPAKTIKGWVMRPFNESEGFISKLAYPSPSTGGSGEGMAPSLSTPPMRISYALPDHIVSRADNPSVGWWNDEELKWNTEGMSDISFDEESRMLTFHSLHLTNLAVLQERDTDFPYQRWMFRPVGE-------------------NHTLFLLEGKAFEIEIEVKHGVCHLLRP-DIPQLHQLRNKKDGWHPAILLKELSKAGINLLPCDADADIIDDVIAKDL---------------EKVEESLYYDLSLIAPSFSLAFSRWNHQRGR 514
BLAST of mRNA_M-pyrifera_M_contig65197.15865.1 vs. uniprot
Match: A0A5A8E334_CAFRO (Casc1_N domain-containing protein n=6 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8E334_CAFRO) HSP 1 Score: 91.3 bits (225), Expect = 4.400e-17 Identity = 54/126 (42.86%), Postives = 72/126 (57.14%), Query Frame = 1
Query: 4 VGGVIAVELLEPPDETTTVKRWEMEVVGPLTNT-ILRRPHPAEGQGMEGALTVRVQVKDDILVPEDVRVAYWSGALDRWMEEEDNQVGWDTE-TRILQFKSTRCVALAMVQPRGLDLPYKSWSITP 375
V GV+ VE+L P VK + L+ + R PHP +G GM ALTV V V +L P DVRV +WS A RW+EE + + + TR LQ K+T ALA++QPR +DLP+ WS+ P
Sbjct: 507 VSGVLFVEVLAMPAAPRVVKSTTLIRETALSRRGVHRLPHPMQGGGMSQALTVTVAVPPTVLAPPDVRVGHWSAAQRRWVEEPEAPAPFLPDGTRELQLKTTFMTALALLQPRTVDLPFAGWSLRP 632 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig65197.15865.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig65197.15865.1 >prot_M-pyrifera_M_contig65197.15865.1 ID=prot_M-pyrifera_M_contig65197.15865.1|Name=mRNA_M-pyrifera_M_contig65197.15865.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=267bp AVGGVIAVELLEPPDETTTVKRWEMEVVGPLTNTILRRPHPAEGQGMEGAback to top mRNA from alignment at M-pyrifera_M_contig65197:421..1221- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig65197.15865.1 ID=mRNA_M-pyrifera_M_contig65197.15865.1|Name=mRNA_M-pyrifera_M_contig65197.15865.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=801bp|location=Sequence derived from alignment at M-pyrifera_M_contig65197:421..1221- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig65197:421..1221- >mRNA_M-pyrifera_M_contig65197.15865.1 ID=mRNA_M-pyrifera_M_contig65197.15865.1|Name=mRNA_M-pyrifera_M_contig65197.15865.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1602bp|location=Sequence derived from alignment at M-pyrifera_M_contig65197:421..1221- (Macrocystis pyrifera P11B4 male)back to top |