mRNA_M-pyrifera_M_contig65049.15844.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig65049.15844.1
Unique NamemRNA_M-pyrifera_M_contig65049.15844.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig65049.15844.1 vs. uniprot
Match: A0A517PPZ7_9PLAN (Uncharacterized protein n=3 Tax=Bacteria TaxID=2 RepID=A0A517PPZ7_9PLAN)

HSP 1 Score: 520 bits (1338), Expect = 5.520e-166
Identity = 274/275 (99.64%), Postives = 274/275 (99.64%), Query Frame = 1
Query:    1 LENITLTTGTAADDITVTPSTDTSINVVGGDPAMSPGDTLTYLTPVGENASLSPDGADGGTISATGGYQSVTFDEIESLTLADNPVLNLVGTSGHDTLIITATNSNSGTYQLNGGPIVSFANITDFTFDGLASDDRLVINNPTGGVFDPVNGIIFNGGDGNETNCDSLEILGGVTERIEHEFVNDSDGSIYFDSEMTATIVYTGLEPIIDTIEAEVRIFQYSDSAETVTVTDAGSGLTTIDSTAGEMVTFIAPTEAFAIFTGDGDDTVNIDSLAA 825
            LENITLTTGTAADDITVTPSTDTSINVVGGDPAMSPGDTLTYLTPVGENASLSPDGADGGTISATGGYQSVTFDEIESLTLADNPVLNLVGTSGHDTLIITATNSNSGTYQLNGGPIVSFANITDFTFDGLASDDRLVINNPTGGVFDPVNGIIFNGGDGNETN DSLEILGGVTERIEHEFVNDSDGSIYFDSEMTATIVYTGLEPIIDTIEAEVRIFQYSDSAETVTVTDAGSGLTTIDSTAGEMVTFIAPTEAFAIFTGDGDDTVNIDSLAA
Sbjct: 3733 LENITLTTGTAADDITVTPSTDTSINVVGGDPAMSPGDTLTYLTPVGENASLSPDGADGGTISATGGYQSVTFDEIESLTLADNPVLNLVGTSGHDTLIITATNSNSGTYQLNGGPIVSFANITDFTFDGLASDDRLVINNPTGGVFDPVNGIIFNGGDGNETNGDSLEILGGVTERIEHEFVNDSDGSIYFDSEMTATIVYTGLEPIIDTIEAEVRIFQYSDSAETVTVTDAGSGLTTIDSTAGEMVTFIAPTEAFAIFTGDGDDTVNIDSLAA 4007          
BLAST of mRNA_M-pyrifera_M_contig65049.15844.1 vs. uniprot
Match: A0A5A8B8E6_9PLAN (Uncharacterized protein (Fragment) n=1 Tax=Gimesia chilikensis TaxID=2605989 RepID=A0A5A8B8E6_9PLAN)

HSP 1 Score: 490 bits (1262), Expect = 8.950e-156
Identity = 256/275 (93.09%), Postives = 265/275 (96.36%), Query Frame = 1
Query:    1 LENITLTTGTAADDITVTPSTDTSINVVGGDPAMSPGDTLTYLTPVGENASLSPDGADGGTISATGGYQSVTFDEIESLTLADNPVLNLVGTSGHDTLIITATNSNSGTYQLNGGPIVSFANITDFTFDGLASDDRLVINNPTGGVFDPVNGIIFNGGDGNETNCDSLEILGGVTERIEHEFVNDSDGSIYFDSEMTATIVYTGLEPIIDTIEAEVRIFQYSDSAETVTVTDAGSGLTTIDSTAGEMVTFIAPTEAFAIFTGDGDDTVNIDSLAA 825
            LENITLTTGTAAD ITVTPS DTSIN+VGGDP +SPGD+LTYLTPVG NASLSPDGADGGTISATGGYQ VTFDEIESLTLADNPVLNLVGTSGHDTLIITATNSNSGTYQLNGGPIVSFANITD TFDGLASDDRLVINNPTGGVFDPVNGIIFNGGDGNETN DSLEILGG+TER+EHEFVNDSDGSIYFDSEMTAT+VYTGLEPIIDTIEAE RIFQYSDSAETVTVT+AGSGLT+IDSTAGEMVTF APTE FAIFTGDGDDT+NIDSLAA
Sbjct: 3733 LENITLTTGTAADAITVTPSMDTSINIVGGDPVISPGDSLTYLTPVGANASLSPDGADGGTISATGGYQGVTFDEIESLTLADNPVLNLVGTSGHDTLIITATNSNSGTYQLNGGPIVSFANITDLTFDGLASDDRLVINNPTGGVFDPVNGIIFNGGDGNETNGDSLEILGGMTERVEHEFVNDSDGSIYFDSEMTATVVYTGLEPIIDTIEAEWRIFQYSDSAETVTVTNAGSGLTSIDSTAGEMVTFAAPTEVFAIFTGDGDDTLNIDSLAA 4007          
BLAST of mRNA_M-pyrifera_M_contig65049.15844.1 vs. uniprot
Match: A0A517VXT1_9PLAN (Uncharacterized protein n=1 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517VXT1_9PLAN)

HSP 1 Score: 339 bits (870), Expect = 4.130e-103
Identity = 178/276 (64.49%), Postives = 219/276 (79.35%), Query Frame = 1
Query:    1 LENITLTTGTAADDITVTPSTDTSINVVGGDPAMSPGDTLTYLTPVGENASLSPDGADGGTISATGGYQSVTFDEIESLTLADNPVLNLVGTSGHDTLIITATNSNSGTYQLNGGPIVSFANITDFTFDGLASDDRLVINNPTGGVFDPVNGIIFNGGDGNETNCDSLEILGGVTERIEHEFVNDSDGSIYFDSEMTATIVYTGLEPIIDTIEAEVRIFQYSDSAETVTVTDAG-SGLTTIDSTAGEMVTFIAPTEAFAIFTGDGDDTVNIDSLAA 825
            +E+I+L T +AADDITV+P+  T+ N+VGGDPA+SPGDTLTYLTP G+  +L+P GADGGTIS TGGYQ+V+FDEIE+LT+  N  L + GTSG D L ITATNSNSG+YQLNGGP V+FA+ITDFTF+GL  +DRLVINN  GG+FDP+NGI FNGG G ET  D+LEILGG    +EH FVNDSDGS+++D E TATI Y GLEP+IDT+ A  RIF +S + ET+TV+DAG +G T IDST GE V+F+ PT +F I  G G+D +NIDSL A
Sbjct: 3082 MESISLATSSAADDITVSPNLTTAFNIVGGDPAVSPGDTLTYLTPAGQTTTLTPSGADGGTISVTGGYQAVSFDEIENLTMDANANLIVNGTSGDDVLTITATNSNSGSYQLNGGPTVNFASITDFTFNGLNGNDRLVINNSAGGLFDPLNGITFNGGTGGETTGDTLEILGGTATTVEHRFVNDSDGSVFYDGEGTATITYIGLEPVIDTVVAVDRIFSFSGANETITVSDAGIAGRTLIDSTFGESVSFLNPTGSFIINAGGGNDIINIDSLDA 3357          
BLAST of mRNA_M-pyrifera_M_contig65049.15844.1 vs. uniprot
Match: A0A517Q8E3_9PLAN (Beta_helix domain-containing protein n=2 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A517Q8E3_9PLAN)

HSP 1 Score: 335 bits (858), Expect = 1.660e-101
Identity = 175/278 (62.95%), Postives = 217/278 (78.06%), Query Frame = 1
Query:    1 LENITLTTGTAADDITVTPSTDTSINVVGGDPAMSPGDTLTYLTPVGENASLSPDGADGGTIS---ATGGYQSVTFDEIESLTLADNPVLNLVGTSGHDTLIITATNSNSGTYQLNGGPIVSFANITDFTFDGLASDDRLVINNPTGGVFDPVNGIIFNGGDGNETNCDSLEILGGVTERIEHEFVNDSDGSIYFDSEMTATIVYTGLEPIIDTIEAEVRIFQYSDSAETVTVTDAGSGLTTIDSTAGEMVTFIAPTEAFAIFTGDGDDTVNIDSLAA 825
            ++ +TLTTG+ AD+ITV P+T T+ ++ GGDP MSPGD+LTYLTP  E A L+P G DGGTIS      GY+ VTFDEIE L + +N  L + GT+G D L I AT++NSGTYQLN GP++ F N+TD TF+GL  DDRLVINNPTGG+FDPV+GII+NGG G ETN D+LEILGG    +E  F++DS+GSIYF++E TATI YTGLEPI+DTI A  R FQYSD+AET+T++DAG G ++IDSTAGE+VTF  PT    I TGDGDDT+N+DSLAA
Sbjct: 2292 VDQVTLTTGSDADEITVAPNTVTAFSIFGGDPDMSPGDSLTYLTPHDEVALLAPAGTDGGTISIENVASGYKDVTFDEIEGLMINEN--LTIEGTAGDDVLTIIATDANSGTYQLNDGPVIDFFNLTDLTFNGLEGDDRLVINNPTGGLFDPVDGIIYNGGTGGETNGDTLEILGGTAGSVEQRFISDSEGSIYFNNESTATISYTGLEPIVDTIAAAARKFQYSDTAETITLSDAGGGQSSIDSTAGELVTFANPTGTLQILTGDGDDTINVDSLAA 2567          
BLAST of mRNA_M-pyrifera_M_contig65049.15844.1 vs. uniprot
Match: A0A2E7KMP1_9PLAN (Beta_helix domain-containing protein (Fragment) n=2 Tax=Bacteria TaxID=2 RepID=A0A2E7KMP1_9PLAN)

HSP 1 Score: 334 bits (856), Expect = 3.080e-101
Identity = 171/276 (61.96%), Postives = 217/276 (78.62%), Query Frame = 1
Query:    1 LENITLTTGTAADDITVTPSTDTSINVVGGDPAMSPGDTLTYLTPVGENASLSPDGADGGTISATG---GYQSVTFDEIESLTLADNPVLNLVGTSGHDTLIITATNSNSGTYQLNGGPIVSFANITDFTFDGLASDDRLVINNPTGGVFDPVNGIIFNGGDGNETNCDSLEILGGVTERIEHEFVNDSDGSIYFDSEMTATIVYTGLEPIIDTIEAEVRIFQYSDSAETVTVTDAGSGLTTIDSTAGEMVTFIAPTEAFAIFTGDGDDTVNIDSL 819
            ++ +TL TGT ADDIT+TP+T T+ N++GGDP M+PGDTLTY+TP GE   L+PDG DGGTI+      GYQ+V FDEIE+  +  N  L + GT+G D LIITAT++NSGTYQLNGG +++F N+TD TF+GL  DDRLVINNPTGG+F+PV+G+I+NGG G ETN D+LEI GG    +EH FVND++G+I++D +  ATIVYTGLEPIIDTIEA  R F YSDS+ET+T+TDAG G +TIDSTAGE+VTF+ PT    +F+G G D +NIDSL
Sbjct: 1897 VDQVTLATGTGADDITLTPNTVTAFNILGGDPTMAPGDTLTYVTPSGEIGLLTPDGPDGGTITIVDDMVGYQAVVFDEIETALVTGN--LTIEGTAGDDELIITATSANSGTYQLNGGSVIAFNNLTDLTFNGLDGDDRLVINNPTGGLFNPVDGVIYNGGTGGETNGDTLEIRGGTAGTVEHRFVNDNEGAIHYDDQFNATIVYTGLEPIIDTIEATGREFHYSDSSETITLTDAGGGQSTIDSTAGELVTFVNPTSFLNLFSGGGSDIINIDSL 2170          
BLAST of mRNA_M-pyrifera_M_contig65049.15844.1 vs. uniprot
Match: UPI00119D7481 (right-handed parallel beta-helix repeat-containing protein n=1 Tax=Gimesia chilikensis TaxID=2605989 RepID=UPI00119D7481)

HSP 1 Score: 330 bits (845), Expect = 9.240e-100
Identity = 169/276 (61.23%), Postives = 217/276 (78.62%), Query Frame = 1
Query:    1 LENITLTTGTAADDITVTPSTDTSINVVGGDPAMSPGDTLTYLTPVGENASLSPDGADGGTISATG---GYQSVTFDEIESLTLADNPVLNLVGTSGHDTLIITATNSNSGTYQLNGGPIVSFANITDFTFDGLASDDRLVINNPTGGVFDPVNGIIFNGGDGNETNCDSLEILGGVTERIEHEFVNDSDGSIYFDSEMTATIVYTGLEPIIDTIEAEVRIFQYSDSAETVTVTDAGSGLTTIDSTAGEMVTFIAPTEAFAIFTGDGDDTVNIDSL 819
            ++ +TL TG+ ADDIT+TP+T T+ N++GG+P M+PGDTLTY+TP GE A L+P+G DGGTI+      GY+ V FDEIE+  + +N  L + GT G D LIITAT++NSGTYQLNGG I++F N+TD TF+GL  DDRLVINNPTGG+F+PV+G+I+NGG G ETN D+LEI GG    +EH FVND++G+I++D +  ATIVYTGLEPIIDTIEA  R F YSDS+ET+T+TDAG G +TIDSTAGE+VTF+ PT    +F+G G D +NIDSL
Sbjct: 1897 VDQVTLATGSGADDITLTPNTVTAFNILGGNPTMAPGDTLTYVTPAGEVALLTPNGPDGGTITIVDDLVGYEDVVFDEIETTLVTEN--LTIEGTVGDDELIITATSANSGTYQLNGGAIIAFNNLTDLTFNGLDGDDRLVINNPTGGLFNPVDGVIYNGGTGGETNGDTLEIRGGTAGTVEHRFVNDNEGAIHYDDQFNATIVYTGLEPIIDTIEATGREFHYSDSSETITLTDAGGGQSTIDSTAGELVTFVNPTSFLNLFSGGGSDIINIDSL 2170          
BLAST of mRNA_M-pyrifera_M_contig65049.15844.1 vs. uniprot
Match: A0A517WE77_9PLAN (Uncharacterized protein n=4 Tax=Gimesia chilikensis TaxID=2605989 RepID=A0A517WE77_9PLAN)

HSP 1 Score: 327 bits (838), Expect = 8.160e-99
Identity = 168/276 (60.87%), Postives = 217/276 (78.62%), Query Frame = 1
Query:    1 LENITLTTGTAADDITVTPSTDTSINVVGGDPAMSPGDTLTYLTPVGENASLSPDGADGGTISATG---GYQSVTFDEIESLTLADNPVLNLVGTSGHDTLIITATNSNSGTYQLNGGPIVSFANITDFTFDGLASDDRLVINNPTGGVFDPVNGIIFNGGDGNETNCDSLEILGGVTERIEHEFVNDSDGSIYFDSEMTATIVYTGLEPIIDTIEAEVRIFQYSDSAETVTVTDAGSGLTTIDSTAGEMVTFIAPTEAFAIFTGDGDDTVNIDSL 819
            ++ +TL TG+ ADDIT+TP+T T+ N++GG P M+PGDTLTY+TP GE   L+PDG DGGTI+      GYQ+V FDEIE+  +  N  L + GT+G D LIITAT++NSGTYQLNGG I++F+N+ +  F+GL  DDR+VINNPTGG+F+PV+G+IFNGG G ETN D+LEILGG    +EH FVN+++G+I++D ++ ATIVYTGLEPIIDTIEA  R F YSDS+ET+T+TDAGSG +TIDSTAGE+V F+ PT    IF+G G D +NIDSL
Sbjct: 1911 VDQVTLATGSGADDITLTPNTVTAFNILGGAPTMAPGDTLTYVTPSGEIGLLTPDGPDGGTITILDDMVGYQAVVFDEIETALVTGN--LTIEGTAGDDELIITATSANSGTYQLNGGAIIAFSNLDELIFNGLDGDDRMVINNPTGGLFNPVDGVIFNGGTGGETNGDTLEILGGTAGTVEHRFVNENEGAIHYDGQLNATIVYTGLEPIIDTIEATSREFHYSDSSETITLTDAGSGQSTIDSTAGELVIFVNPTSFLQIFSGGGSDIINIDSL 2184          
BLAST of mRNA_M-pyrifera_M_contig65049.15844.1 vs. uniprot
Match: A0A518FI06_9PLAN (Uncharacterized protein n=1 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518FI06_9PLAN)

HSP 1 Score: 309 bits (792), Expect = 1.220e-92
Identity = 169/278 (60.79%), Postives = 201/278 (72.30%), Query Frame = 1
Query:    1 LENITLTTGTAADDITVTPSTDTSINVVGGDPAMSPGDTLTYLTPVGENASLSPDGADGGTISATGGYQSVTFDEIESLTLADNPVLNLVGTSGHDTLIITATNSNSGTYQLNGGPIVSFANITDFTFDGLASDDRLVINNPTGGVFDPVNGIIFNGGDGNETNCDSLEILGGVTERIEHEFVNDSDGSIYFDSEMTATIVYTGLEPIIDTIEAEVRIFQYSDSAETVTVTDAG-SGLTTIDSTAGEMVTFIAPTEAFAIFT----GDGDDTVNIDSL 819
            ++N+ LTTGTAADDITV+P+  T   + GGDP  SPGDTLTYLTP GE A+L+P G DGG ISA+GGYQ V FDEIE LT   + V+N  G++G D L ITAT+SNSG+YQLNGGP ++F  ITDFTF GL  DDRLVINNP GG+FDP +GI FNGG   ETN D LEILGG    +EH F N+SDGSI++D E TATI YTGLEP+ DT+ A  RIF ++ S ETVT++DAG SG T IDST GE V F  PT    I T    G G D +N+D +
Sbjct: 1317 IDNLMLTTGTAADDITVSPNLVTKTYITGGDPVDSPGDTLTYLTPAGETATLTPVGLDGGAISASGGYQDVVFDEIEYLTTGTSLVVN--GSNGDDVLTITATSSNSGSYQLNGGPAINFVGITDFTFHGLDGDDRLVINNPAGGLFDPADGITFNGGSAGETNGDQLEILGGSASSVEHRFTNNSDGSIFYDGETTATITYTGLEPVTDTVAAGDRIFTFTGSDETVTLSDAGTSGQTQIDSTLGESVVFSNPTGNLVINTEQAGGSGTDLINLDGI 1592          
BLAST of mRNA_M-pyrifera_M_contig65049.15844.1 vs. uniprot
Match: A0A6I6A970_9PLAN (Choice-of-anchor D domain-containing protein n=3 Tax=Gimesia TaxID=1649453 RepID=A0A6I6A970_9PLAN)

HSP 1 Score: 300 bits (767), Expect = 2.700e-89
Identity = 165/282 (58.51%), Postives = 207/282 (73.40%), Query Frame = 1
Query:    1 LENITLTTGTAADDITVTPSTDTSINVVGGDPAM--SPGDTLTYLTPVGENASLSPDGADGGTISATGGYQSVTFDEIESLTLADNPVLNLVGTSGHDTLIITATNSNSGTYQLNGGPIVSFANITDFTFDGLASDDRLVINNPTGGVFDPVNGIIFNGGDGNETNCDSLEILGGVTERIEHEFVNDSDGSIYFDSEMTATIVYTGLEPIIDTIEAEVRIFQYSDSAETVTVTD---AGSGLTTIDSTAGEMVTFIAPTEAFAIFT----GDGDDTVNIDSL 819
            LE++TL +GT ADDITV P+  T+I++VGGDPA   SPGDTLTYLTP GE+++ +P G DGGTISATGGYQ VTFDEIE LT   + V++  GT+G DTL ITA  +NSGTYQ+NGGP+++F   TDFTF+GL  DD L+INNP GG+FDPVNGI FNGG G ET  D+L+ILGG    +EH+FV++ +GS++F+ E TATI YTGLEPI DTI A  RIF ++ +AET+T++D    G GL+ IDS  GE V F+ P     I T    G G D +NID L
Sbjct:  233 LEDLTLYSGTDADDITVNPNVLTTIDIVGGDPAAPTSPGDTLTYLTPPGESSTFTPSGLDGGTISATGGYQDVTFDEIEGLTFGGSIVVD--GTAGDDTLTITALTANSGTYQINGGPVINFNANTDFTFNGLNGDDTLIINNPAGGLFDPVNGITFNGGTGGETLGDTLQILGGTAATVEHQFVDNHNGSVFFNGEGTATITYTGLEPIDDTITATDRIFTFTGAAETITLSDDGGPGDGLSLIDSDLGESVNFVHPLATLTINTELSGGSGSDAINIDPL 512          
BLAST of mRNA_M-pyrifera_M_contig65049.15844.1 vs. uniprot
Match: UPI0018D89632 (hypothetical protein n=1 Tax=Gimesia fumaroli TaxID=2527976 RepID=UPI0018D89632)

HSP 1 Score: 299 bits (766), Expect = 3.630e-89
Identity = 160/280 (57.14%), Postives = 205/280 (73.21%), Query Frame = 1
Query:    1 LENITLTTGTAADDITVTPSTDTSINVVGGDPAMSPGDTLTYLTPVGENASLSPDGADGGTISATGGYQSVTFDEIESLTLADNPVLNLVGTSGHDTLIITATNSNSGTYQLNGGPIVSFANITDFTFDGLASDDRLVINNPTGGVFDPVNGIIFNGGDGNETNCDSLEILGGVTERIEHEFVNDSDGSIYFDSEMTATIVYTGLEPIIDTIEAEVRIFQYSDSAETVTVTD---AGSGLTTIDSTAGEMVTFIAPTEAFAIFT----GDGDDTVNIDSL 819
            LEN+TL  GT ADDITV+P+  TSI++ GGDPA++PGDTLTYLTP GE ++ +P G DGGTI ATGG+Q V FDEIE LT   +  ++  GT+G D L ITAT+++SGTYQ+NGGP+++F   TDFTF+GLA DDRLVINNP GGVFDP+NGI FNGG G ET  D+LEILGG    +EH F  ++DGS++++ E  ATI YTGLEP++DTI A  RIF +  + ET+T++D   AG G++ IDST GE V F+ P     I T    G G D VNI+++
Sbjct: 1635 LENLTLFAGTDADDITVSPNALTSIDIFGGDPAIAPGDTLTYLTPPGETSTFTPAGLDGGTIGATGGFQDVVFDEIEGLTFGGSVAVD--GTAGDDVLTITATSADSGTYQINGGPVINFNAATDFTFNGLAGDDRLVINNPGGGVFDPLNGIFFNGGSGGETLGDTLEILGGTAGSVEHRFTTENDGSVFYNGEGVATITYTGLEPVLDTIVATDRIFSFLGAGETITLSDNAGAGDGISLIDSTLGESVAFVHPAGTVTINTETSGGSGVDQVNINAV 1912          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig65049.15844.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A517PPZ7_9PLAN5.520e-16699.64Uncharacterized protein n=3 Tax=Bacteria TaxID=2 R... [more]
A0A5A8B8E6_9PLAN8.950e-15693.09Uncharacterized protein (Fragment) n=1 Tax=Gimesia... [more]
A0A517VXT1_9PLAN4.130e-10364.49Uncharacterized protein n=1 Tax=Gimesia aquarii Ta... [more]
A0A517Q8E3_9PLAN1.660e-10162.95Beta_helix domain-containing protein n=2 Tax=Gimes... [more]
A0A2E7KMP1_9PLAN3.080e-10161.96Beta_helix domain-containing protein (Fragment) n=... [more]
UPI00119D74819.240e-10061.23right-handed parallel beta-helix repeat-containing... [more]
A0A517WE77_9PLAN8.160e-9960.87Uncharacterized protein n=4 Tax=Gimesia chilikensi... [more]
A0A518FI06_9PLAN1.220e-9260.79Uncharacterized protein n=1 Tax=Gimesia panareensi... [more]
A0A6I6A970_9PLAN2.700e-8958.51Choice-of-anchor D domain-containing protein n=3 T... [more]
UPI0018D896323.630e-8957.14hypothetical protein n=1 Tax=Gimesia fumaroli TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig65049contigM-pyrifera_M_contig65049:2..826 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score254.2
Seed ortholog evalue6.9e-65
Seed eggNOG ortholog344747.PM8797T_03194
KEGG koko:K01317,ko:K15125
KEGG Pathwayko05133,map05133
Hectar predicted targeting categoryother localisation
EggNOG free text desc.TIGRFAM autotransporter-associated beta strand repeat protein
EggNOG OGs2IYDY@203682,COG1572@1,COG1572@2,COG2931@1,COG2931@2,COG3210@1,COG3210@2,COG3420@1,COG3420@2,COG4625@1,COG4625@2
EC3.4.21.10
COG Functional cat.QU
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00536,ko01000,ko01002,ko04131
Exons1
Model size825
Cds size825
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816538.8884125-CDS-M-pyrifera_M_contig65049:1..8261622816538.8884125-CDS-M-pyrifera_M_contig65049:1..826Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig65049 2..826 -
1692278034.9859476-CDS-M-pyrifera_M_contig65049:1..8261692278034.9859476-CDS-M-pyrifera_M_contig65049:1..826Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig65049 2..826 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig65049.15844.1prot_M-pyrifera_M_contig65049.15844.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig65049 2..826 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig65049.15844.1

>prot_M-pyrifera_M_contig65049.15844.1 ID=prot_M-pyrifera_M_contig65049.15844.1|Name=mRNA_M-pyrifera_M_contig65049.15844.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=275bp
LENITLTTGTAADDITVTPSTDTSINVVGGDPAMSPGDTLTYLTPVGENA
SLSPDGADGGTISATGGYQSVTFDEIESLTLADNPVLNLVGTSGHDTLII
TATNSNSGTYQLNGGPIVSFANITDFTFDGLASDDRLVINNPTGGVFDPV
NGIIFNGGDGNETNCDSLEILGGVTERIEHEFVNDSDGSIYFDSEMTATI
VYTGLEPIIDTIEAEVRIFQYSDSAETVTVTDAGSGLTTIDSTAGEMVTF
IAPTEAFAIFTGDGDDTVNIDSLAA
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mRNA from alignment at M-pyrifera_M_contig65049:2..826-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig65049.15844.1 ID=mRNA_M-pyrifera_M_contig65049.15844.1|Name=mRNA_M-pyrifera_M_contig65049.15844.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=825bp|location=Sequence derived from alignment at M-pyrifera_M_contig65049:2..826- (Macrocystis pyrifera P11B4 male)
CTGGAAAATATCACCCTCACAACTGGAACTGCTGCCGACGATATCACAGT CACTCCCAGCACAGATACTTCGATTAATGTCGTTGGTGGTGATCCGGCAA TGTCTCCTGGCGATACATTGACCTACCTCACCCCTGTTGGTGAGAACGCT TCCCTTTCCCCCGACGGTGCTGATGGTGGAACAATCTCCGCCACAGGTGG CTATCAGAGTGTCACATTCGACGAAATCGAAAGTCTGACACTCGCCGACA ATCCGGTCTTGAACCTGGTTGGTACCTCAGGTCATGACACACTGATCATC ACTGCGACCAATTCTAACTCCGGAACTTACCAGCTCAACGGCGGTCCAAT CGTCAGTTTCGCCAATATCACCGACTTTACTTTCGACGGGCTGGCCAGCG ATGACCGTCTGGTGATCAACAATCCCACCGGTGGAGTTTTTGATCCTGTT AACGGCATTATCTTCAACGGCGGCGACGGTAATGAGACCAATTGTGACTC CCTCGAAATTCTGGGCGGAGTGACTGAGAGAATCGAACATGAATTCGTGA ATGACAGTGACGGCAGCATCTACTTCGACAGTGAAATGACTGCCACCATT GTCTACACCGGACTGGAACCGATCATTGACACGATAGAAGCAGAAGTTCG AATCTTCCAATACTCCGATTCCGCAGAAACGGTCACGGTCACTGATGCCG GAAGCGGTCTGACAACTATTGATTCGACTGCCGGGGAAATGGTTACATTT ATTGCCCCCACTGAAGCATTTGCAATCTTTACCGGCGACGGAGACGACAC CGTCAACATCGATTCGCTTGCTGCG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig65049:2..826-

>mRNA_M-pyrifera_M_contig65049.15844.1 ID=mRNA_M-pyrifera_M_contig65049.15844.1|Name=mRNA_M-pyrifera_M_contig65049.15844.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1650bp|location=Sequence derived from alignment at M-pyrifera_M_contig65049:2..826- (Macrocystis pyrifera P11B4 male)
CTGGAAAATATCACCCTCACAACTGGAACTGCTGCCGACGATATCACAGT
CACTCCCAGCACAGATACTTCGATTAATGTCGTTGGTGGTGATCCGGCAA
TGTCTCCTGGCGATACATTGACCTACCTCACCCCTGTTGGTGAGAACGCT
TCCCTTTCCCCCGACGGTGCTGATGGTGGAACAATCTCCGCCACAGGTGG
CTATCAGAGTGTCACATTCGACGAAATCGAAAGTCTGACACTCGCCGACA
ATCCGGTCTTGAACCTGGTTGGTACCTCAGGTCATGACACACTGATCATC
ACTGCGACCAATTCTAACTCCGGAACTTACCAGCTCAACGGCGGTCCAAT
CGTCAGTTTCGCCAATATCACCGACTTTACTTTCGACGGGCTGGCCAGCG
ATGACCGTCTGGTGATCAACAATCCCACCGGTGGAGTTTTTGATCCTGTT
AACGGCATTATCTTCAACGGCGGCGACGGTAATGAGACCAATTGTGACTC
CCTCGAAATTCTGGGCGGAGTGACTGAGAGAATCGAACATGAATTCGTGA
ATGACAGTGACGGCAGCATCTACTTCGACAGTGAAATGACTGCCACCATT
GTCTACACCGGACTGGAACCGATCATTGACACGATAGAAGCAGAAGTTCG
AATCTTCCAATACTCCGATTCCGCAGAAACGGTCACGGTCACTGATGCCG
GAAGCGGTCTGACAACTATTGATTCGACTGCCGGGGAAATGGTTACATTT
ATTGCCCCCACTGAAGCATTTGCAATCTTTACCGGCGACGGAGACGACAC
CGTCAACATCGATTCGCTTGCTGCGCTGGAAAATATCACCCTCACAACTG
GAACTGCTGCCGACGATATCACAGTCACTCCCAGCACAGATACTTCGATT
AATGTCGTTGGTGGTGATCCGGCAATGTCTCCTGGCGATACATTGACCTA
CCTCACCCCTGTTGGTGAGAACGCTTCCCTTTCCCCCGACGGTGCTGATG
GTGGAACAATCTCCGCCACAGGTGGCTATCAGAGTGTCACATTCGACGAA
ATCGAAAGTCTGACACTCGCCGACAATCCGGTCTTGAACCTGGTTGGTAC
CTCAGGTCATGACACACTGATCATCACTGCGACCAATTCTAACTCCGGAA
CTTACCAGCTCAACGGCGGTCCAATCGTCAGTTTCGCCAATATCACCGAC
TTTACTTTCGACGGGCTGGCCAGCGATGACCGTCTGGTGATCAACAATCC
CACCGGTGGAGTTTTTGATCCTGTTAACGGCATTATCTTCAACGGCGGCG
ACGGTAATGAGACCAATTGTGACTCCCTCGAAATTCTGGGCGGAGTGACT
GAGAGAATCGAACATGAATTCGTGAATGACAGTGACGGCAGCATCTACTT
CGACAGTGAAATGACTGCCACCATTGTCTACACCGGACTGGAACCGATCA
TTGACACGATAGAAGCAGAAGTTCGAATCTTCCAATACTCCGATTCCGCA
GAAACGGTCACGGTCACTGATGCCGGAAGCGGTCTGACAACTATTGATTC
GACTGCCGGGGAAATGGTTACATTTATTGCCCCCACTGAAGCATTTGCAA
TCTTTACCGGCGACGGAGACGACACCGTCAACATCGATTCGCTTGCTGCG
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