mRNA_M-pyrifera_M_contig65049.15844.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig65049.15844.1 vs. uniprot
Match: A0A517PPZ7_9PLAN (Uncharacterized protein n=3 Tax=Bacteria TaxID=2 RepID=A0A517PPZ7_9PLAN) HSP 1 Score: 520 bits (1338), Expect = 5.520e-166 Identity = 274/275 (99.64%), Postives = 274/275 (99.64%), Query Frame = 1
Query: 1 LENITLTTGTAADDITVTPSTDTSINVVGGDPAMSPGDTLTYLTPVGENASLSPDGADGGTISATGGYQSVTFDEIESLTLADNPVLNLVGTSGHDTLIITATNSNSGTYQLNGGPIVSFANITDFTFDGLASDDRLVINNPTGGVFDPVNGIIFNGGDGNETNCDSLEILGGVTERIEHEFVNDSDGSIYFDSEMTATIVYTGLEPIIDTIEAEVRIFQYSDSAETVTVTDAGSGLTTIDSTAGEMVTFIAPTEAFAIFTGDGDDTVNIDSLAA 825
LENITLTTGTAADDITVTPSTDTSINVVGGDPAMSPGDTLTYLTPVGENASLSPDGADGGTISATGGYQSVTFDEIESLTLADNPVLNLVGTSGHDTLIITATNSNSGTYQLNGGPIVSFANITDFTFDGLASDDRLVINNPTGGVFDPVNGIIFNGGDGNETN DSLEILGGVTERIEHEFVNDSDGSIYFDSEMTATIVYTGLEPIIDTIEAEVRIFQYSDSAETVTVTDAGSGLTTIDSTAGEMVTFIAPTEAFAIFTGDGDDTVNIDSLAA
Sbjct: 3733 LENITLTTGTAADDITVTPSTDTSINVVGGDPAMSPGDTLTYLTPVGENASLSPDGADGGTISATGGYQSVTFDEIESLTLADNPVLNLVGTSGHDTLIITATNSNSGTYQLNGGPIVSFANITDFTFDGLASDDRLVINNPTGGVFDPVNGIIFNGGDGNETNGDSLEILGGVTERIEHEFVNDSDGSIYFDSEMTATIVYTGLEPIIDTIEAEVRIFQYSDSAETVTVTDAGSGLTTIDSTAGEMVTFIAPTEAFAIFTGDGDDTVNIDSLAA 4007
BLAST of mRNA_M-pyrifera_M_contig65049.15844.1 vs. uniprot
Match: A0A5A8B8E6_9PLAN (Uncharacterized protein (Fragment) n=1 Tax=Gimesia chilikensis TaxID=2605989 RepID=A0A5A8B8E6_9PLAN) HSP 1 Score: 490 bits (1262), Expect = 8.950e-156 Identity = 256/275 (93.09%), Postives = 265/275 (96.36%), Query Frame = 1
Query: 1 LENITLTTGTAADDITVTPSTDTSINVVGGDPAMSPGDTLTYLTPVGENASLSPDGADGGTISATGGYQSVTFDEIESLTLADNPVLNLVGTSGHDTLIITATNSNSGTYQLNGGPIVSFANITDFTFDGLASDDRLVINNPTGGVFDPVNGIIFNGGDGNETNCDSLEILGGVTERIEHEFVNDSDGSIYFDSEMTATIVYTGLEPIIDTIEAEVRIFQYSDSAETVTVTDAGSGLTTIDSTAGEMVTFIAPTEAFAIFTGDGDDTVNIDSLAA 825
LENITLTTGTAAD ITVTPS DTSIN+VGGDP +SPGD+LTYLTPVG NASLSPDGADGGTISATGGYQ VTFDEIESLTLADNPVLNLVGTSGHDTLIITATNSNSGTYQLNGGPIVSFANITD TFDGLASDDRLVINNPTGGVFDPVNGIIFNGGDGNETN DSLEILGG+TER+EHEFVNDSDGSIYFDSEMTAT+VYTGLEPIIDTIEAE RIFQYSDSAETVTVT+AGSGLT+IDSTAGEMVTF APTE FAIFTGDGDDT+NIDSLAA
Sbjct: 3733 LENITLTTGTAADAITVTPSMDTSINIVGGDPVISPGDSLTYLTPVGANASLSPDGADGGTISATGGYQGVTFDEIESLTLADNPVLNLVGTSGHDTLIITATNSNSGTYQLNGGPIVSFANITDLTFDGLASDDRLVINNPTGGVFDPVNGIIFNGGDGNETNGDSLEILGGMTERVEHEFVNDSDGSIYFDSEMTATVVYTGLEPIIDTIEAEWRIFQYSDSAETVTVTNAGSGLTSIDSTAGEMVTFAAPTEVFAIFTGDGDDTLNIDSLAA 4007
BLAST of mRNA_M-pyrifera_M_contig65049.15844.1 vs. uniprot
Match: A0A517VXT1_9PLAN (Uncharacterized protein n=1 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517VXT1_9PLAN) HSP 1 Score: 339 bits (870), Expect = 4.130e-103 Identity = 178/276 (64.49%), Postives = 219/276 (79.35%), Query Frame = 1
Query: 1 LENITLTTGTAADDITVTPSTDTSINVVGGDPAMSPGDTLTYLTPVGENASLSPDGADGGTISATGGYQSVTFDEIESLTLADNPVLNLVGTSGHDTLIITATNSNSGTYQLNGGPIVSFANITDFTFDGLASDDRLVINNPTGGVFDPVNGIIFNGGDGNETNCDSLEILGGVTERIEHEFVNDSDGSIYFDSEMTATIVYTGLEPIIDTIEAEVRIFQYSDSAETVTVTDAG-SGLTTIDSTAGEMVTFIAPTEAFAIFTGDGDDTVNIDSLAA 825
+E+I+L T +AADDITV+P+ T+ N+VGGDPA+SPGDTLTYLTP G+ +L+P GADGGTIS TGGYQ+V+FDEIE+LT+ N L + GTSG D L ITATNSNSG+YQLNGGP V+FA+ITDFTF+GL +DRLVINN GG+FDP+NGI FNGG G ET D+LEILGG +EH FVNDSDGS+++D E TATI Y GLEP+IDT+ A RIF +S + ET+TV+DAG +G T IDST GE V+F+ PT +F I G G+D +NIDSL A
Sbjct: 3082 MESISLATSSAADDITVSPNLTTAFNIVGGDPAVSPGDTLTYLTPAGQTTTLTPSGADGGTISVTGGYQAVSFDEIENLTMDANANLIVNGTSGDDVLTITATNSNSGSYQLNGGPTVNFASITDFTFNGLNGNDRLVINNSAGGLFDPLNGITFNGGTGGETTGDTLEILGGTATTVEHRFVNDSDGSVFYDGEGTATITYIGLEPVIDTVVAVDRIFSFSGANETITVSDAGIAGRTLIDSTFGESVSFLNPTGSFIINAGGGNDIINIDSLDA 3357
BLAST of mRNA_M-pyrifera_M_contig65049.15844.1 vs. uniprot
Match: A0A517Q8E3_9PLAN (Beta_helix domain-containing protein n=2 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A517Q8E3_9PLAN) HSP 1 Score: 335 bits (858), Expect = 1.660e-101 Identity = 175/278 (62.95%), Postives = 217/278 (78.06%), Query Frame = 1
Query: 1 LENITLTTGTAADDITVTPSTDTSINVVGGDPAMSPGDTLTYLTPVGENASLSPDGADGGTIS---ATGGYQSVTFDEIESLTLADNPVLNLVGTSGHDTLIITATNSNSGTYQLNGGPIVSFANITDFTFDGLASDDRLVINNPTGGVFDPVNGIIFNGGDGNETNCDSLEILGGVTERIEHEFVNDSDGSIYFDSEMTATIVYTGLEPIIDTIEAEVRIFQYSDSAETVTVTDAGSGLTTIDSTAGEMVTFIAPTEAFAIFTGDGDDTVNIDSLAA 825
++ +TLTTG+ AD+ITV P+T T+ ++ GGDP MSPGD+LTYLTP E A L+P G DGGTIS GY+ VTFDEIE L + +N L + GT+G D L I AT++NSGTYQLN GP++ F N+TD TF+GL DDRLVINNPTGG+FDPV+GII+NGG G ETN D+LEILGG +E F++DS+GSIYF++E TATI YTGLEPI+DTI A R FQYSD+AET+T++DAG G ++IDSTAGE+VTF PT I TGDGDDT+N+DSLAA
Sbjct: 2292 VDQVTLTTGSDADEITVAPNTVTAFSIFGGDPDMSPGDSLTYLTPHDEVALLAPAGTDGGTISIENVASGYKDVTFDEIEGLMINEN--LTIEGTAGDDVLTIIATDANSGTYQLNDGPVIDFFNLTDLTFNGLEGDDRLVINNPTGGLFDPVDGIIYNGGTGGETNGDTLEILGGTAGSVEQRFISDSEGSIYFNNESTATISYTGLEPIVDTIAAAARKFQYSDTAETITLSDAGGGQSSIDSTAGELVTFANPTGTLQILTGDGDDTINVDSLAA 2567
BLAST of mRNA_M-pyrifera_M_contig65049.15844.1 vs. uniprot
Match: A0A2E7KMP1_9PLAN (Beta_helix domain-containing protein (Fragment) n=2 Tax=Bacteria TaxID=2 RepID=A0A2E7KMP1_9PLAN) HSP 1 Score: 334 bits (856), Expect = 3.080e-101 Identity = 171/276 (61.96%), Postives = 217/276 (78.62%), Query Frame = 1
Query: 1 LENITLTTGTAADDITVTPSTDTSINVVGGDPAMSPGDTLTYLTPVGENASLSPDGADGGTISATG---GYQSVTFDEIESLTLADNPVLNLVGTSGHDTLIITATNSNSGTYQLNGGPIVSFANITDFTFDGLASDDRLVINNPTGGVFDPVNGIIFNGGDGNETNCDSLEILGGVTERIEHEFVNDSDGSIYFDSEMTATIVYTGLEPIIDTIEAEVRIFQYSDSAETVTVTDAGSGLTTIDSTAGEMVTFIAPTEAFAIFTGDGDDTVNIDSL 819
++ +TL TGT ADDIT+TP+T T+ N++GGDP M+PGDTLTY+TP GE L+PDG DGGTI+ GYQ+V FDEIE+ + N L + GT+G D LIITAT++NSGTYQLNGG +++F N+TD TF+GL DDRLVINNPTGG+F+PV+G+I+NGG G ETN D+LEI GG +EH FVND++G+I++D + ATIVYTGLEPIIDTIEA R F YSDS+ET+T+TDAG G +TIDSTAGE+VTF+ PT +F+G G D +NIDSL
Sbjct: 1897 VDQVTLATGTGADDITLTPNTVTAFNILGGDPTMAPGDTLTYVTPSGEIGLLTPDGPDGGTITIVDDMVGYQAVVFDEIETALVTGN--LTIEGTAGDDELIITATSANSGTYQLNGGSVIAFNNLTDLTFNGLDGDDRLVINNPTGGLFNPVDGVIYNGGTGGETNGDTLEIRGGTAGTVEHRFVNDNEGAIHYDDQFNATIVYTGLEPIIDTIEATGREFHYSDSSETITLTDAGGGQSTIDSTAGELVTFVNPTSFLNLFSGGGSDIINIDSL 2170
BLAST of mRNA_M-pyrifera_M_contig65049.15844.1 vs. uniprot
Match: UPI00119D7481 (right-handed parallel beta-helix repeat-containing protein n=1 Tax=Gimesia chilikensis TaxID=2605989 RepID=UPI00119D7481) HSP 1 Score: 330 bits (845), Expect = 9.240e-100 Identity = 169/276 (61.23%), Postives = 217/276 (78.62%), Query Frame = 1
Query: 1 LENITLTTGTAADDITVTPSTDTSINVVGGDPAMSPGDTLTYLTPVGENASLSPDGADGGTISATG---GYQSVTFDEIESLTLADNPVLNLVGTSGHDTLIITATNSNSGTYQLNGGPIVSFANITDFTFDGLASDDRLVINNPTGGVFDPVNGIIFNGGDGNETNCDSLEILGGVTERIEHEFVNDSDGSIYFDSEMTATIVYTGLEPIIDTIEAEVRIFQYSDSAETVTVTDAGSGLTTIDSTAGEMVTFIAPTEAFAIFTGDGDDTVNIDSL 819
++ +TL TG+ ADDIT+TP+T T+ N++GG+P M+PGDTLTY+TP GE A L+P+G DGGTI+ GY+ V FDEIE+ + +N L + GT G D LIITAT++NSGTYQLNGG I++F N+TD TF+GL DDRLVINNPTGG+F+PV+G+I+NGG G ETN D+LEI GG +EH FVND++G+I++D + ATIVYTGLEPIIDTIEA R F YSDS+ET+T+TDAG G +TIDSTAGE+VTF+ PT +F+G G D +NIDSL
Sbjct: 1897 VDQVTLATGSGADDITLTPNTVTAFNILGGNPTMAPGDTLTYVTPAGEVALLTPNGPDGGTITIVDDLVGYEDVVFDEIETTLVTEN--LTIEGTVGDDELIITATSANSGTYQLNGGAIIAFNNLTDLTFNGLDGDDRLVINNPTGGLFNPVDGVIYNGGTGGETNGDTLEIRGGTAGTVEHRFVNDNEGAIHYDDQFNATIVYTGLEPIIDTIEATGREFHYSDSSETITLTDAGGGQSTIDSTAGELVTFVNPTSFLNLFSGGGSDIINIDSL 2170
BLAST of mRNA_M-pyrifera_M_contig65049.15844.1 vs. uniprot
Match: A0A517WE77_9PLAN (Uncharacterized protein n=4 Tax=Gimesia chilikensis TaxID=2605989 RepID=A0A517WE77_9PLAN) HSP 1 Score: 327 bits (838), Expect = 8.160e-99 Identity = 168/276 (60.87%), Postives = 217/276 (78.62%), Query Frame = 1
Query: 1 LENITLTTGTAADDITVTPSTDTSINVVGGDPAMSPGDTLTYLTPVGENASLSPDGADGGTISATG---GYQSVTFDEIESLTLADNPVLNLVGTSGHDTLIITATNSNSGTYQLNGGPIVSFANITDFTFDGLASDDRLVINNPTGGVFDPVNGIIFNGGDGNETNCDSLEILGGVTERIEHEFVNDSDGSIYFDSEMTATIVYTGLEPIIDTIEAEVRIFQYSDSAETVTVTDAGSGLTTIDSTAGEMVTFIAPTEAFAIFTGDGDDTVNIDSL 819
++ +TL TG+ ADDIT+TP+T T+ N++GG P M+PGDTLTY+TP GE L+PDG DGGTI+ GYQ+V FDEIE+ + N L + GT+G D LIITAT++NSGTYQLNGG I++F+N+ + F+GL DDR+VINNPTGG+F+PV+G+IFNGG G ETN D+LEILGG +EH FVN+++G+I++D ++ ATIVYTGLEPIIDTIEA R F YSDS+ET+T+TDAGSG +TIDSTAGE+V F+ PT IF+G G D +NIDSL
Sbjct: 1911 VDQVTLATGSGADDITLTPNTVTAFNILGGAPTMAPGDTLTYVTPSGEIGLLTPDGPDGGTITILDDMVGYQAVVFDEIETALVTGN--LTIEGTAGDDELIITATSANSGTYQLNGGAIIAFSNLDELIFNGLDGDDRMVINNPTGGLFNPVDGVIFNGGTGGETNGDTLEILGGTAGTVEHRFVNENEGAIHYDGQLNATIVYTGLEPIIDTIEATSREFHYSDSSETITLTDAGSGQSTIDSTAGELVIFVNPTSFLQIFSGGGSDIINIDSL 2184
BLAST of mRNA_M-pyrifera_M_contig65049.15844.1 vs. uniprot
Match: A0A518FI06_9PLAN (Uncharacterized protein n=1 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518FI06_9PLAN) HSP 1 Score: 309 bits (792), Expect = 1.220e-92 Identity = 169/278 (60.79%), Postives = 201/278 (72.30%), Query Frame = 1
Query: 1 LENITLTTGTAADDITVTPSTDTSINVVGGDPAMSPGDTLTYLTPVGENASLSPDGADGGTISATGGYQSVTFDEIESLTLADNPVLNLVGTSGHDTLIITATNSNSGTYQLNGGPIVSFANITDFTFDGLASDDRLVINNPTGGVFDPVNGIIFNGGDGNETNCDSLEILGGVTERIEHEFVNDSDGSIYFDSEMTATIVYTGLEPIIDTIEAEVRIFQYSDSAETVTVTDAG-SGLTTIDSTAGEMVTFIAPTEAFAIFT----GDGDDTVNIDSL 819
++N+ LTTGTAADDITV+P+ T + GGDP SPGDTLTYLTP GE A+L+P G DGG ISA+GGYQ V FDEIE LT + V+N G++G D L ITAT+SNSG+YQLNGGP ++F ITDFTF GL DDRLVINNP GG+FDP +GI FNGG ETN D LEILGG +EH F N+SDGSI++D E TATI YTGLEP+ DT+ A RIF ++ S ETVT++DAG SG T IDST GE V F PT I T G G D +N+D +
Sbjct: 1317 IDNLMLTTGTAADDITVSPNLVTKTYITGGDPVDSPGDTLTYLTPAGETATLTPVGLDGGAISASGGYQDVVFDEIEYLTTGTSLVVN--GSNGDDVLTITATSSNSGSYQLNGGPAINFVGITDFTFHGLDGDDRLVINNPAGGLFDPADGITFNGGSAGETNGDQLEILGGSASSVEHRFTNNSDGSIFYDGETTATITYTGLEPVTDTVAAGDRIFTFTGSDETVTLSDAGTSGQTQIDSTLGESVVFSNPTGNLVINTEQAGGSGTDLINLDGI 1592
BLAST of mRNA_M-pyrifera_M_contig65049.15844.1 vs. uniprot
Match: A0A6I6A970_9PLAN (Choice-of-anchor D domain-containing protein n=3 Tax=Gimesia TaxID=1649453 RepID=A0A6I6A970_9PLAN) HSP 1 Score: 300 bits (767), Expect = 2.700e-89 Identity = 165/282 (58.51%), Postives = 207/282 (73.40%), Query Frame = 1
Query: 1 LENITLTTGTAADDITVTPSTDTSINVVGGDPAM--SPGDTLTYLTPVGENASLSPDGADGGTISATGGYQSVTFDEIESLTLADNPVLNLVGTSGHDTLIITATNSNSGTYQLNGGPIVSFANITDFTFDGLASDDRLVINNPTGGVFDPVNGIIFNGGDGNETNCDSLEILGGVTERIEHEFVNDSDGSIYFDSEMTATIVYTGLEPIIDTIEAEVRIFQYSDSAETVTVTD---AGSGLTTIDSTAGEMVTFIAPTEAFAIFT----GDGDDTVNIDSL 819
LE++TL +GT ADDITV P+ T+I++VGGDPA SPGDTLTYLTP GE+++ +P G DGGTISATGGYQ VTFDEIE LT + V++ GT+G DTL ITA +NSGTYQ+NGGP+++F TDFTF+GL DD L+INNP GG+FDPVNGI FNGG G ET D+L+ILGG +EH+FV++ +GS++F+ E TATI YTGLEPI DTI A RIF ++ +AET+T++D G GL+ IDS GE V F+ P I T G G D +NID L
Sbjct: 233 LEDLTLYSGTDADDITVNPNVLTTIDIVGGDPAAPTSPGDTLTYLTPPGESSTFTPSGLDGGTISATGGYQDVTFDEIEGLTFGGSIVVD--GTAGDDTLTITALTANSGTYQINGGPVINFNANTDFTFNGLNGDDTLIINNPAGGLFDPVNGITFNGGTGGETLGDTLQILGGTAATVEHQFVDNHNGSVFFNGEGTATITYTGLEPIDDTITATDRIFTFTGAAETITLSDDGGPGDGLSLIDSDLGESVNFVHPLATLTINTELSGGSGSDAINIDPL 512
BLAST of mRNA_M-pyrifera_M_contig65049.15844.1 vs. uniprot
Match: UPI0018D89632 (hypothetical protein n=1 Tax=Gimesia fumaroli TaxID=2527976 RepID=UPI0018D89632) HSP 1 Score: 299 bits (766), Expect = 3.630e-89 Identity = 160/280 (57.14%), Postives = 205/280 (73.21%), Query Frame = 1
Query: 1 LENITLTTGTAADDITVTPSTDTSINVVGGDPAMSPGDTLTYLTPVGENASLSPDGADGGTISATGGYQSVTFDEIESLTLADNPVLNLVGTSGHDTLIITATNSNSGTYQLNGGPIVSFANITDFTFDGLASDDRLVINNPTGGVFDPVNGIIFNGGDGNETNCDSLEILGGVTERIEHEFVNDSDGSIYFDSEMTATIVYTGLEPIIDTIEAEVRIFQYSDSAETVTVTD---AGSGLTTIDSTAGEMVTFIAPTEAFAIFT----GDGDDTVNIDSL 819
LEN+TL GT ADDITV+P+ TSI++ GGDPA++PGDTLTYLTP GE ++ +P G DGGTI ATGG+Q V FDEIE LT + ++ GT+G D L ITAT+++SGTYQ+NGGP+++F TDFTF+GLA DDRLVINNP GGVFDP+NGI FNGG G ET D+LEILGG +EH F ++DGS++++ E ATI YTGLEP++DTI A RIF + + ET+T++D AG G++ IDST GE V F+ P I T G G D VNI+++
Sbjct: 1635 LENLTLFAGTDADDITVSPNALTSIDIFGGDPAIAPGDTLTYLTPPGETSTFTPAGLDGGTIGATGGFQDVVFDEIEGLTFGGSVAVD--GTAGDDVLTITATSADSGTYQINGGPVINFNAATDFTFNGLAGDDRLVINNPGGGVFDPLNGIFFNGGSGGETLGDTLEILGGTAGSVEHRFTTENDGSVFYNGEGVATITYTGLEPVLDTIVATDRIFSFLGAGETITLSDNAGAGDGISLIDSTLGESVAFVHPAGTVTINTETSGGSGVDQVNINAV 1912 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig65049.15844.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig65049.15844.1 >prot_M-pyrifera_M_contig65049.15844.1 ID=prot_M-pyrifera_M_contig65049.15844.1|Name=mRNA_M-pyrifera_M_contig65049.15844.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=275bp LENITLTTGTAADDITVTPSTDTSINVVGGDPAMSPGDTLTYLTPVGENAback to top mRNA from alignment at M-pyrifera_M_contig65049:2..826- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig65049.15844.1 ID=mRNA_M-pyrifera_M_contig65049.15844.1|Name=mRNA_M-pyrifera_M_contig65049.15844.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=825bp|location=Sequence derived from alignment at M-pyrifera_M_contig65049:2..826- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig65049:2..826- >mRNA_M-pyrifera_M_contig65049.15844.1 ID=mRNA_M-pyrifera_M_contig65049.15844.1|Name=mRNA_M-pyrifera_M_contig65049.15844.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1650bp|location=Sequence derived from alignment at M-pyrifera_M_contig65049:2..826- (Macrocystis pyrifera P11B4 male)back to top |