mRNA_M-pyrifera_M_contig14134.6185.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig14134.6185.1
Unique NamemRNA_M-pyrifera_M_contig14134.6185.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig14134.6185.1 vs. uniprot
Match: A0A6H5JZI2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZI2_9PHAE)

HSP 1 Score: 227 bits (578), Expect = 6.820e-65
Identity = 142/252 (56.35%), Postives = 152/252 (60.32%), Query Frame = 1 
Query:    1 RLSGLS-DEVELHVISLTYKDLAGLSKVDKHGEAIDKATFLQNFPVPGLVGDRLFHALDSNKSGRISFDDFVVGLAVCCRGSLEEKMRFIFEVYDMNGDGFISRDELLLMLNQVPRTLLNMGAEGTEREPTLPSGIGSLDWNRASLDDSGNVTNGNDHTDGSGEGXXXXREGGAPRMLTPHSKVRREGTGLG---------------------------AGG-------KGLMSNFTNERIADQALSEFGSG 651
            RL+G   D+VELHVISLTYKDLAGLSK DK GE+IDKATFLQNFPVPGLVGDRLFHALDSNKSGRISFDDFVVGLAVCCRG+LEEKMRF+F VYDMN DG I RDELLLMLNQVPRTLLN+G E  +R         +LDW+  +LD     T         G G        A  M TP       G                               AGG       KG  S FTNE IADQAL EFG G
Sbjct:   17 RLAGTKFDDVELHVISLTYKDLAGLSKGDKGGESIDKATFLQNFPVPGLVGDRLFHALDSNKSGRISFDDFVVGLAVCCRGTLEEKMRFLFGVYDMNEDGLIGRDELLLMLNQVPRTLLNIGIEPVDRS--------ALDWDSRTLDGETKTT---------GYGLDP-----ALAMTTPRVGSYSRGDDFXXXXXXXXXXXXXXXXXXXXXXXXXXSLAGGYVTPPADKGPRSMFTNEGIADQALREFGEG 246
[Close]
BLAST of mRNA_M-pyrifera_M_contig14134.6185.1 vs. uniprot
Match: D8LIC5_ECTSI (N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIC5_ECTSI)

HSP 1 Score: 119 bits (299), Expect = 1.580e-27
Identity = 58/115 (50.43%), Postives = 78/115 (67.83%), Query Frame = 1 
Query:   19 DEVELHVISLTYKDLAGLSKVDKHGEAIDKATFLQNFPVPGLVGDRLFHALDSNKSGRISFDDFVVGLAVCCRGSLEEKMRFIFEVYDMNGDGFISRDELLLMLNQVPRTLLNMG 363
            DE E+ VI  T+KDL     V+     IDK TFLQ  P+PGL+G+RLF   D   SG I +++FV GLAV CRGS EEK+ FIF +YD++G G ++RDEL  +LN VP++++  G
Sbjct:   17 DECEIKVIKETFKDLC---HVNGGSMRIDKETFLQYLPLPGLLGERLFAVFDKKSSGEIDYEEFVCGLAVTCRGSWEEKVEFIFNLYDIHGQGAVNRDELAALLNHVPKSIMRFG 128
[Close]
BLAST of mRNA_M-pyrifera_M_contig14134.6185.1 vs. uniprot
Match: A0A6H5L0T4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0T4_9PHAE)

HSP 1 Score: 119 bits (299), Expect = 1.740e-27
Identity = 58/115 (50.43%), Postives = 78/115 (67.83%), Query Frame = 1 
Query:   19 DEVELHVISLTYKDLAGLSKVDKHGEAIDKATFLQNFPVPGLVGDRLFHALDSNKSGRISFDDFVVGLAVCCRGSLEEKMRFIFEVYDMNGDGFISRDELLLMLNQVPRTLLNMG 363
            DE E+ VI  T+KDL     V+     IDK TFLQ  P+PGL+G+RLF   D   SG I +++FV GLAV CRGS EEK+ FIF +YD++G G ++RDEL  +LN VP++++  G
Sbjct:   22 DECEIKVIKETFKDLC---HVNGGSMRIDKETFLQYLPLPGLLGERLFAVFDKKSSGEIDYEEFVCGLAVTCRGSWEEKVEFIFNLYDIHGQGAVNRDELAALLNHVPKSIMRFG 133
[Close]
BLAST of mRNA_M-pyrifera_M_contig14134.6185.1 vs. uniprot
Match: A0A835YJT6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJT6_9STRA)

HSP 1 Score: 108 bits (269), Expect = 8.810e-27
Identity = 49/105 (46.67%), Postives = 75/105 (71.43%), Query Frame = 1 
Query:   19 DEVELHVISLTYKDLAGLSKVDKHGEAIDKATFLQNFPVPGLVGDRLFHALDSNKSGRISFDDFVVGLAVCCRGSLEEKMRFIFEVYDMNGDGFISRDELLLMLN 333
            D  E+ V+  T+KDL  +S     G ++DK TFLQ FP+PGL+G+RLF   D+ +SG++ F++FV GLAV CRG  ++K+ FIF +YD++G G +SR+EL  +++
Sbjct:    5 DHCEITVLRQTFKDLCAISG---KGTSVDKETFLQYFPLPGLLGERLFAVFDTKRSGKVDFEEFVCGLAVTCRGDWDQKVDFIFSLYDVHGTGAVSREELTALVS 106
[Close]
BLAST of mRNA_M-pyrifera_M_contig14134.6185.1 vs. uniprot
Match: A0A7S0K6K0_CAFRO (Hypothetical protein (Fragment) n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0K6K0_CAFRO)

HSP 1 Score: 111 bits (277), Expect = 3.430e-26
Identity = 54/119 (45.38%), Postives = 81/119 (68.07%), Query Frame = 1 
Query:   28 ELHVISLTYKDLAGLSKVDKHGEAIDKATFLQNFPVPGLVGDRLFHALDSNKSGRISFDDFVVGLAVCCRGSLEEKMRFIFEVYDMNGDGFISRDELLLMLNQVPRTLLNMGAEGTERE 384
            EL V+  T+ +L+  S     G  IDK TFL+ FP PGL+G+RLF   D+ K+G + +++F+VGLA  CRGS++++MRFIFEV+D++GDG +SR EL  +L+ +PR +L        +E
Sbjct:   40 ELTVLRSTFNELSERSP----GTTIDKHTFLKAFPWPGLLGERLFDMFDTKKTGAVDYEEFIVGLARVCRGSVDDRMRFIFEVHDLSGDGSVSRAELRTLLHHLPRPVLRSVTHSGRKE 154
[Close]
BLAST of mRNA_M-pyrifera_M_contig14134.6185.1 vs. uniprot
Match: A0A7S3HBN9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HBN9_9STRA)

HSP 1 Score: 114 bits (284), Expect = 1.670e-25
Identity = 52/113 (46.02%), Postives = 79/113 (69.91%), Query Frame = 1 
Query:   19 DEVELHVISLTYKDLAGLSKVDKHGEAIDKATFLQNFPVPGLVGDRLFHALDSNKSGRISFDDFVVGLAVCCRGSLEEKMRFIFEVYDMNGDGFISRDELLLMLNQVPRTLLN 357
            D  E+HV+  T++DL+  S     G  IDK TFLQ FP+ GL+G+RLF   D+ K+G I FDDF++GLA  CRGS+++K+ F+F +YD++ D  +S+ +L  +LNQ+P+  L+
Sbjct:   35 DTDEIHVLRKTWQDLSDRSD----GSGIDKETFLQYFPLNGLLGERLFAQFDNKKTGSIDFDDFILGLATVCRGSMDDKIHFVFNMYDVSHDNTVSKQDLTTLLNQIPKEALS 143
[Close]
BLAST of mRNA_M-pyrifera_M_contig14134.6185.1 vs. uniprot
Match: A0A5A8D2T4_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D2T4_CAFRO)

HSP 1 Score: 111 bits (277), Expect = 3.040e-25
Identity = 54/119 (45.38%), Postives = 81/119 (68.07%), Query Frame = 1 
Query:   28 ELHVISLTYKDLAGLSKVDKHGEAIDKATFLQNFPVPGLVGDRLFHALDSNKSGRISFDDFVVGLAVCCRGSLEEKMRFIFEVYDMNGDGFISRDELLLMLNQVPRTLLNMGAEGTERE 384
            EL V+  T+ +L+  S     G  IDK TFL+ FP PGL+G+RLF   D+ K+G + +++F+VGLA  CRGS++++MRFIFEV+D++GDG +SR EL  +L+ +PR +L        +E
Sbjct:   26 ELTVLRSTFNELSERSP----GTTIDKHTFLKAFPWPGLLGERLFDMFDTKKTGAVDYEEFIVGLARVCRGSVDDRMRFIFEVHDLSGDGSVSRAELRTLLHHLPRPVLRSVTHSGRKE 140
[Close]
BLAST of mRNA_M-pyrifera_M_contig14134.6185.1 vs. uniprot
Match: A0A2D4CGZ4_PYTIN (Protein kinase, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CGZ4_PYTIN)

HSP 1 Score: 111 bits (277), Expect = 5.580e-25
Identity = 53/113 (46.90%), Postives = 80/113 (70.80%), Query Frame = 1 
Query:   22 EVELHVISLTYKDLAGLSKVDKHGEAIDKATFLQNFPVPGLVGDRLFHALDSNKSGRISFDDFVVGLAVCCRGSLEEKMRFIFEVYDMNGDGFISRDELLLMLNQVPRTLLNM 360
            E E+H++  T+K LA      K+G  +DK TFL+ FP+PGL+G+RLF  +D + SG I++++FV GLA+  RGS  EK++FIF++YD+   G ISR EL+ ML+Q P + L++
Sbjct:   28 EEEMHLLRETFKGLADA----KNGNTVDKETFLKCFPLPGLLGERLFEVIDKDGSGSIAYNEFVYGLAILFRGSQREKLKFIFDLYDLTATGSISRHELVTMLHQFPESALDI 136
[Close]
BLAST of mRNA_M-pyrifera_M_contig14134.6185.1 vs. uniprot
Match: A0A5A8D2W6_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D2W6_CAFRO)

HSP 1 Score: 111 bits (277), Expect = 6.460e-25
Identity = 54/119 (45.38%), Postives = 81/119 (68.07%), Query Frame = 1 
Query:   28 ELHVISLTYKDLAGLSKVDKHGEAIDKATFLQNFPVPGLVGDRLFHALDSNKSGRISFDDFVVGLAVCCRGSLEEKMRFIFEVYDMNGDGFISRDELLLMLNQVPRTLLNMGAEGTERE 384
            EL V+  T+ +L+  S     G  IDK TFL+ FP PGL+G+RLF   D+ K+G + +++F+VGLA  CRGS++++MRFIFEV+D++GDG +SR EL  +L+ +PR +L        +E
Sbjct:   26 ELTVLRSTFNELSERSP----GTTIDKHTFLKAFPWPGLLGERLFDMFDTKKTGAVDYEEFIVGLARVCRGSVDDRMRFIFEVHDLSGDGSVSRAELRTLLHHLPRPVLRSVTHSGRKE 140
[Close]
BLAST of mRNA_M-pyrifera_M_contig14134.6185.1 vs. uniprot
Match: A0A5A8CRD9_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CRD9_CAFRO)

HSP 1 Score: 111 bits (277), Expect = 1.540e-24
Identity = 54/119 (45.38%), Postives = 81/119 (68.07%), Query Frame = 1 
Query:   28 ELHVISLTYKDLAGLSKVDKHGEAIDKATFLQNFPVPGLVGDRLFHALDSNKSGRISFDDFVVGLAVCCRGSLEEKMRFIFEVYDMNGDGFISRDELLLMLNQVPRTLLNMGAEGTERE 384
            EL V+  T+ +L+  S     G  IDK TFL+ FP PGL+G+RLF   D+ K+G + +++F+VGLA  CRGS++++MRFIFEV+D++GDG +SR EL  +L+ +PR +L        +E
Sbjct:   26 ELTVLRSTFNELSERSP----GTTIDKHTFLKAFPWPGLLGERLFDMFDTKKTGAVDYEEFIVGLARVCRGSVDDRMRFIFEVHDLSGDGSVSRAELRTLLHHLPRPVLRSVTHSGRKE 140
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig14134.6185.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JZI2_9PHAE6.820e-6556.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LIC5_ECTSI1.580e-2750.43N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepI... [more]
A0A6H5L0T4_9PHAE1.740e-2750.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YJT6_9STRA8.810e-2746.67Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S0K6K0_CAFRO3.430e-2645.38Hypothetical protein (Fragment) n=1 Tax=Cafeteria ... [more]
A0A7S3HBN9_9STRA1.670e-2546.02Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A5A8D2T4_CAFRO3.040e-2545.38Uncharacterized protein n=2 Tax=Cafeteria roenberg... [more]
A0A2D4CGZ4_PYTIN5.580e-2546.90Protein kinase, putative n=1 Tax=Pythium insidiosu... [more]
A0A5A8D2W6_CAFRO6.460e-2545.38Uncharacterized protein n=1 Tax=Cafeteria roenberg... [more]
A0A5A8CRD9_CAFRO1.540e-2445.38Uncharacterized protein n=2 Tax=Cafeteria roenberg... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig14134contigM-pyrifera_M_contig14134:5954..8299 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score121.3
Seed ortholog evalue5.5e-25
Seed eggNOG ortholog2880.D8LIC5
KEGG koko:K08794,ko:K08808
KEGG Pathwayko04921,ko04925,map04921,map04925
Hectar predicted targeting categoryother localisation
EggNOG free text desc.protein serine/threonine kinase activity
EggNOG OGsKOG0032@1,KOG0032@2759
Ec32 ortholog descriptionEF-hand domain pair
Ec32 orthologEc-11_000480.1
EC2.7.11.1,2.7.11.17
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001
Exons4
Model size651
Cds size651
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig14134.6185.1prot_M-pyrifera_M_contig14134.6185.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig14134 5954..8299 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815836.531151-CDS-M-pyrifera_M_contig14134:5953..61041622815836.531151-CDS-M-pyrifera_M_contig14134:5953..6104Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig14134 5954..6104 +
1692277597.942449-CDS-M-pyrifera_M_contig14134:5953..61041692277597.942449-CDS-M-pyrifera_M_contig14134:5953..6104Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig14134 5954..6104 +
1622815836.5417986-CDS-M-pyrifera_M_contig14134:7285..74251622815836.5417986-CDS-M-pyrifera_M_contig14134:7285..7425Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig14134 7286..7425 +
1692277597.9557042-CDS-M-pyrifera_M_contig14134:7285..74251692277597.9557042-CDS-M-pyrifera_M_contig14134:7285..7425Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig14134 7286..7425 +
1622815836.552207-CDS-M-pyrifera_M_contig14134:7816..80731622815836.552207-CDS-M-pyrifera_M_contig14134:7816..8073Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig14134 7817..8073 +
1692277597.965774-CDS-M-pyrifera_M_contig14134:7816..80731692277597.965774-CDS-M-pyrifera_M_contig14134:7816..8073Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig14134 7817..8073 +
1622815836.5635896-CDS-M-pyrifera_M_contig14134:8196..82991622815836.5635896-CDS-M-pyrifera_M_contig14134:8196..8299Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig14134 8197..8299 +
1692277597.976601-CDS-M-pyrifera_M_contig14134:8196..82991692277597.976601-CDS-M-pyrifera_M_contig14134:8196..8299Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig14134 8197..8299 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig14134.6185.1

>prot_M-pyrifera_M_contig14134.6185.1 ID=prot_M-pyrifera_M_contig14134.6185.1|Name=mRNA_M-pyrifera_M_contig14134.6185.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=217bp
RLSGLSDEVELHVISLTYKDLAGLSKVDKHGEAIDKATFLQNFPVPGLVG
DRLFHALDSNKSGRISFDDFVVGLAVCCRGSLEEKMRFIFEVYDMNGDGF
ISRDELLLMLNQVPRTLLNMGAEGTEREPTLPSGIGSLDWNRASLDDSGN
VTNGNDHTDGSGEGGGGGREGGAPRMLTPHSKVRREGTGLGAGGKGLMSN
FTNERIADQALSEFGSG
back to top

mRNA from alignment at M-pyrifera_M_contig14134:5954..8299+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig14134.6185.1 ID=mRNA_M-pyrifera_M_contig14134.6185.1|Name=mRNA_M-pyrifera_M_contig14134.6185.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=2346bp|location=Sequence derived from alignment at M-pyrifera_M_contig14134:5954..8299+ (Macrocystis pyrifera P11B4 male)
CGCCTGTCTGGCCTTAGCGACGAGGTGGAGCTGCACGTGATCAGCCTGAC
ATACAAGGACCTGGCGGGACTGTCGAAAGTGGACAAGCATGGCGAGGCCA
TCGATAAAGCCACCTTCTTGCAAAATTTTCCTGTTCCTGGGCTCGTGGGA
GGTGGGCTCAAAGGGTTTTACGTTCACCGATCAAAAGGACTTTCAACAGT
ACGCTATAAATATGAACTCCTGTGATACGTGGTGTGTGGAGCGGTGCCCC
CGGCAGGTTTTCTATTGTGTGGAGGACACACCGACGTGGGTGGGTGCCCC
TGGTCTACACCGAACGGAGTGGCTAAACCTTGGGTATGACCTTGAACTTT
TGTGTATTGAGGCGGTACAATATCGGGGAAGGGGACCTGTTATCCACAGG
TACAGCAATACTCGTAGGGTTTTGATGGTAGTGTCATTGTGCGAGTAGCT
GTGCTCTAACTATTAATATTAGTAGAAAAAGCTCGGACAGATAATTCCCA
CAGTTGATGATATCGATCTTTCATGCCAGATCTATTCCCGATTTCGTATG
ATCTGTAGGATTTAGCTCAAGTTGCCGGGTGGGAGCTGTGTAACGTGTAT
GATCCACGGTAGGACATGTTTCCTGCGGGGTGAATCTGTACTATTCACAG
ATCCTGCACAGCATTTCGTAACGTCAGGTTAGTATCTAGATGATCTCTCA
CTCGGACGTGTGGAACCTTTTCCGTCTGACAAGCCGCTCGCTTTATGTCT
GTATAGTTCGTGTCTGTCTGTATGCCTGTCTGCCTGCCTGCAGCGATTGT
ATTTGCACATGTACTGCTCAGTTTATGCTTTACGGCCGTATCTCTTGCAG
TGTCTGCGGTCAGACCCACCATAACAACGAAAATTATCGAGAAAGAGCGA
AAACGAACCAAAAATAACGGAAATGAGCGAAAATTAACGAAAACAAACAG
CAATGAACGACAACAAAATTCATCACAATCAAACGAACGGAATTAACAGA
TGCGTACGAAACATGCACAAAAACGACTGCAACACACGAATACGAACGAA
GTGAATCGTGGCTCCGTGGTCCAAACCCCCCTACCGAGCTCCTAATGCGC
CCCCCATCTCCTTCCTGTCCCCTAACCCCTTCCGAAATCCCTCCCTTGTC
CCATCCCCTATCCCCTTCCCAACCCTTCTCATCCTCTAAACCGTCCCCTA
TCCCCTTCTCACCCCCTAACCCGTCCCCTATCCCCATCTTATCCCCTAAA
TCCTCCCCTATCCCATCTCATCCCCTAACCCCGTTTTCATAACCTCTCCT
GCCTCTCCTGCCCACGCTTATATCCTTGGCAGACCGCTTGTTCCACGCTC
TCGACAGCAACAAGTCGGGGCGAATATCGTTCGACGATTTCGTGGTGGGA
TTGGCCGTGTGCTGTCGCGGTAGCTTGGAGGAAAAGATGCGCTTCATTTT
CGAGGTGTACGACATGAACGGGGTGAGGACACCTGGGGACACCACTCTTT
ATGGGCATGCTGGTGCTGGTTGTGGTGGTGGGGGTGGTTGGAGACACGGC
TACATAGGGGGGTGTTGCTTGCCGACGGCGGCGATGCTGGTGGTACTGGT
TGTGCTGGTTGGTGTTGGTGGTGTTGGTGAGGCTGGTATTTGTTGTTGGT
GCGGATGTTGCTGTCGGTGGTTGTCGTAGTTGTCGTCATTGCTGTCGGTG
GTTGTCGTGGTGGTGTTGTTATGCGTTTGTAGGCGTTATGCGGTGTTGGC
GTTATTTTGTGTTGTTGTTGTTGTTGTTGTTGTTTGTTTGTTCGGTCCCA
TCCCATCCCACTCACTCACTCAAACCCAACGCCTACTCCACCCTACCCTA
CCCTCATCGACAGGACGGTTTCATTAGCAGGGACGAGCTCCTCCTCATGC
TCAACCAGGTCCCGCGCACCCTGCTTAACATGGGTGCAGAGGGGACCGAG
AGAGAGCCCACCCTTCCCTCCGGGATTGGCTCGTTGGACTGGAACAGGGC
CTCCCTCGACGACAGTGGGAATGTTACCAACGGAAATGACCATACCGACG
GCAGTGGCGAAGGAGGGGGGGGAGGGAGAGAAGGCGGCGCCCCCCGGATG
CTAACACCTCATTCAAAAGTGTTCAACAGCGTTGGCGGAAGAGACAGTGC
GGGATTTGATGGGGCTCCTCGCACCGCCGCTTCGCCTGCACGGCGGCCAG
CGTCTGCCGGACGTATCCACGGGAGTTCAATGGAACGAGGGAGCAGAAGG
GAGGGGACGGGGTTGGGGGCGGGGGGCAAGGGGTTGATGTCGAATTTCAC
GAACGAGAGAATTGCGGATCAGGCTCTGAGCGAGTTCGGGAGTGGA
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig14134:5954..8299+

>mRNA_M-pyrifera_M_contig14134.6185.1 ID=mRNA_M-pyrifera_M_contig14134.6185.1|Name=mRNA_M-pyrifera_M_contig14134.6185.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1302bp|location=Sequence derived from alignment at M-pyrifera_M_contig14134:5954..8299+ (Macrocystis pyrifera P11B4 male)
CGCCTGTCTGGCCTTAGCGACGAGGTGGAGCTGCACGTGATCAGCCTGAC
ATACAAGGACCTGGCGGGACTGTCGAAAGTGGACAAGCATGGCGAGGCCA
TCGATAAAGCCACCTTCTTGCAAAATTTTCCTGTTCCTGGGCTCGTGGGA
GCGCCTGTCTGGCCTTAGCGACGAGGTGGAGCTGCACGTGATCAGCCTGA
CATACAAGGACCTGGCGGGACTGTCGAAAGTGGACAAGCATGGCGAGGCC
ATCGATAAAGCCACCTTCTTGCAAAATTTTCCTGTTCCTGGGCTCGTGGG
AGACCGCTTGTTCCACGCTCTCGACAGCAACAAGTCGGGGCGAATATCGT
TCGACGATTTCGTGGTGGGATTGGCCGTGTGCTGTCGCGGTAGCTTGGAG
GAAAAGATGCGCTTCATTTTCGAGGTGTACGACATGAACGGGACCGCTTG
TTCCACGCTCTCGACAGCAACAAGTCGGGGCGAATATCGTTCGACGATTT
CGTGGTGGGATTGGCCGTGTGCTGTCGCGGTAGCTTGGAGGAAAAGATGC
GCTTCATTTTCGAGGTGTACGACATGAACGGGGACGGTTTCATTAGCAGG
GACGAGCTCCTCCTCATGCTCAACCAGGTCCCGCGCACCCTGCTTAACAT
GGGTGCAGAGGGGACCGAGAGAGAGCCCACCCTTCCCTCCGGGATTGGCT
CGTTGGACTGGAACAGGGCCTCCCTCGACGACAGTGGGAATGTTACCAAC
GGAAATGACCATACCGACGGCAGTGGCGAAGGAGGGGGGGGAGGGAGAGA
AGGCGGCGCCCCCCGGATGCTAACACCTCATTCAAAAGTGACGGTTTCAT
TAGCAGGGACGAGCTCCTCCTCATGCTCAACCAGGTCCCGCGCACCCTGC
TTAACATGGGTGCAGAGGGGACCGAGAGAGAGCCCACCCTTCCCTCCGGG
ATTGGCTCGTTGGACTGGAACAGGGCCTCCCTCGACGACAGTGGGAATGT
TACCAACGGAAATGACCATACCGACGGCAGTGGCGAAGGAGGGGGGGGAG
GGAGAGAAGGCGGCGCCCCCCGGATGCTAACACCTCATTCAAAAGTCAGA
AGGGAGGGGACGGGGTTGGGGGCGGGGGGCAAGGGGTTGATGTCGAATTT
CACGAACGAGAGAATTGCGGATCAGGCTCTGAGCGAGTTCGGGAGTGGAC
AGAAGGGAGGGGACGGGGTTGGGGGCGGGGGGCAAGGGGTTGATGTCGAA
TTTCACGAACGAGAGAATTGCGGATCAGGCTCTGAGCGAGTTCGGGAGTG
GA
back to top