mRNA_M-pyrifera_M_contig1413.6182.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig1413.6182.1 vs. uniprot
Match: D7FLX7_ECTSI (PepX_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLX7_ECTSI) HSP 1 Score: 330 bits (846), Expect = 4.740e-97 Identity = 253/600 (42.17%), Postives = 309/600 (51.50%), Query Frame = 1
Query: 1 GFNDSLDSGWVQSTGWMARIFLEGVTPVTPEDSWGYQANQAIMGHKDNWSILKDAHIRFMDDTSKHTGRMVSSACVSHAVHELLAEE-GSSEAAPSQSSRPSSAAKVWCGASVAVGMRRASTVLSPPRSPPFXXXXXPPLSAHSAAVLNSPSSEAGLGVDNLESDEGGAPLMEPAQGNSDQNGTRERTAAVSAGTSLPAVAAASETGEGGGAEENFFSGGANAGGNTGCCSDTPTSLGEDGRRSSPGTVGRLEETLPFYLHVSGWLDASAHAAVMAFMTLPCRGAELLVGPWNHGGHQHVRPHHVTTRSKFDFRTEVSGFFVRCLSSA-PERLSRAGGSETAGDVRSVSPLHREDGNYADAGTEPHGTSVALYAAEGRGLSCSPAQT--------------PTPNL-----DASAASTALLLTGAHSGTQAVAEVGAMAV----ENRESEALWKKARPRVRFFTHQEEQWHEANFFPSISPNKDDVTLFLG--KRLPPHPQPFTPAGTPSHLSASAXXXXXXXXXXGGSALRTGPTAEGHLSDESC--TTVTGREI-SAGGESREGGADPARPRGVGMRKRLSSRLANWPPFRKPKVRVG 1710
GFNDSLDSGWVQSTGWMARIFLEGVTPV EDSWGYQA+QAI HKDNWS+L+D HIR+MDD S+ TGR+V SAC S AV LLAE G AP SS P G+ +T+ SPP SA SA + +SE +S G P ME + + +G ERT A L++ LPFYLHVSGWLDASAHAAVMAF TLPCRG+ELLVGPWNHGGHQHVRPHHVTT SKFDF+TEVSGF V+ LS P ++A S A +PL E A+AGT + A A+ S SPA P+ L DA A + A + GA A AE G A E++ES+ALW++ARPRVR+FTHQEE+WH++ FPS ++ DV LFLG ++ P + P G ++ G + + G AEG E + TGRE+ S+GGE+ G+ RGV R RLSSRL +WP FRKP++ +
Sbjct: 305 GFNDSLDSGWVQSTGWMARIFLEGVTPVKSEDSWGYQAHQAISQHKDNWSLLEDDHIRYMDDRSRQTGRVVRSACASQAVQNLLAERHGCCGPAPGPSSNPRG------GSGPDSEEPSCATLASPPNFDGIT-------SALSADCSSDENSER-----KADSTPHGKPGME--ESGCEASGG-ERTVAGGXXXXXXXXXXXXXXXXXXXXXXXXXX--------XXXXXXXXXXXXXXXXXXXXXXXXNLDKILPFYLHVSGWLDASAHAAVMAFTTLPCRGSELLVGPWNHGGHQHVRPHHVTTLSKFDFKTEVSGFLVQRLSQDNPSDSAKASDSAKAPAADPEAPL--ESSTAAEAGT-----TTATRDAQ---ASSSPAHXXXXXXXXXXXXXXXPSVPLLQDGGDAGANAAAAVDAGATEAVDAAAEGGGGASVLLDESQESKALWRRARPRVRYFTHQEERWHDSADFPSDRADRTDVLLFLGDTEQHPLSTKQTVPGGPATNAQKEGE---------GAATIHHGVNAEGVEGGEGSGGSEQTGRELGSSGGEAAADGSGAEAKRGV--RVRLSSRLTSWPSFRKPRLTLS 854
BLAST of mRNA_M-pyrifera_M_contig1413.6182.1 vs. uniprot
Match: A0A835YUK7_9STRA (X-Pro dipeptidyl-peptidase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUK7_9STRA) HSP 1 Score: 87.8 bits (216), Expect = 2.110e-14 Identity = 43/76 (56.58%), Postives = 52/76 (68.42%), Query Frame = 1
Query: 751 LEETLPFYLHVSGWLDASAHAAVMAFMTLPCRGAELLVGPWNHGGHQHVRPHH--VTTRSKFDFRTEVSGFFVRCL 972
L L YLHVSGW+DASA A+++A+ TLPC LL+GPW HGG QHVR H T+ + FDF EVS FFV+ L
Sbjct: 256 LAAALLHYLHVSGWMDASASASLLAYHTLPCASRALLIGPWTHGGVQHVRLHLDLKTSMATFDFAREVSDFFVKTL 331
BLAST of mRNA_M-pyrifera_M_contig1413.6182.1 vs. uniprot
Match: A0A7X7Z3S2_9DELT (CocE/NonD family hydrolase n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7X7Z3S2_9DELT) HSP 1 Score: 66.2 bits (160), Expect = 1.030e-7 Identity = 39/82 (47.56%), Postives = 49/82 (59.76%), Query Frame = 1
Query: 724 RSSPGTVG-RLEET-LPFYLHVSGWLD-ASAHAAVMAFMTLPCRGAELLVGPWNHGGHQHVRPHHVTTRSKFDFRTEVSGFF 960
R SP T RL +P Y ++SGW D A HAAV F+T+ G+ LL+GPW+HGG +RP T RS+FD EV FF
Sbjct: 297 RFSPHTYSDRLRAAGIPVY-NISGWFDGAYPHAAVKRFLTVENPGSRLLLGPWDHGGADQIRPFDKTVRSRFDLIGEVRRFF 377
BLAST of mRNA_M-pyrifera_M_contig1413.6182.1 vs. uniprot
Match: A0A7S1XSJ3_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XSJ3_9STRA) HSP 1 Score: 62.4 bits (150), Expect = 2.020e-6 Identity = 81/280 (28.93%), Postives = 106/280 (37.86%), Query Frame = 1
Query: 682 CCSDTPTSLGEDGR----RSSPGTVGRLE---ETLPFYLHVSGWLDASAHAAV-MAFMTLPCRGAELLVGPWNHGGHQHVRPHHV---TTRSKFDFRTEVSGFFVRCLSSAPERLSRAGGSETAGDVRSVSPLHREDGNYADAGTEPHGTSVALYAAEGRGLSCSPAQTPTPNLD------ASAASTALLLTGAHS------------------GTQAVAEVGAMAVENRESEALWKKA--RPRVRFFTHQEEQWHEANFFPSISPNKDDVTLFLGKRLP 1410
CC + L + GR R +P L+ E YL +SGW D +A + MAF T P L+GPWNHGG QHVR T S+F E + FF L++ ++ T G R P+H G H T + PA TPN + +S T LL G S G +A G A E RE A RP++R+FT Q E W + P+ +TL L K P
Sbjct: 409 CCIEALNPLADVGRKRNVREAPAPGAGLDGGAEAEAAYLFMSGWFDQTALPCLKMAFHT-PSALTYCLMGPWNHGGLQHVRMFPGSGGTGPSRFPHEVETADFFEAFLNNT---VTPRHNGHTKGYPRQRPPMHSNP--EPGCGGCSHPTEAYHNPTQDHEAQLLPATNATPNANRALCPPSSPDLTHLLGEGTSSRGALEPEPWRSVERRLSFGFRAADPRGWDAEERREWMGRGAVAYHRPKMRYFTSQAEAWSHRDEIPAHFAQSTPLTLLLDKGAP 682 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1413.6182.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig1413.6182.1 >prot_M-pyrifera_M_contig1413.6182.1 ID=prot_M-pyrifera_M_contig1413.6182.1|Name=mRNA_M-pyrifera_M_contig1413.6182.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=574bp GFNDSLDSGWVQSTGWMARIFLEGVTPVTPEDSWGYQANQAIMGHKDNWSback to top mRNA from alignment at M-pyrifera_M_contig1413:913..10676- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig1413.6182.1 ID=mRNA_M-pyrifera_M_contig1413.6182.1|Name=mRNA_M-pyrifera_M_contig1413.6182.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=9764bp|location=Sequence derived from alignment at M-pyrifera_M_contig1413:913..10676- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig1413:913..10676- >mRNA_M-pyrifera_M_contig1413.6182.1 ID=mRNA_M-pyrifera_M_contig1413.6182.1|Name=mRNA_M-pyrifera_M_contig1413.6182.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=3444bp|location=Sequence derived from alignment at M-pyrifera_M_contig1413:913..10676- (Macrocystis pyrifera P11B4 male)back to top |