mRNA_M-pyrifera_M_contig141.6175.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig141.6175.1 vs. uniprot
Match: A0A6H5J8U9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8U9_9PHAE) HSP 1 Score: 156 bits (395), Expect = 2.910e-43 Identity = 78/150 (52.00%), Postives = 100/150 (66.67%), Query Frame = 1
Query: 22 FVEAGTRTIVGVWANAYDTRPGHDNNGVGCLENGCAPKLTRDGV-VDDIESMWSCAQSIVPDGGFCEIEFTFANPQDVVDIQVAFLYEADSARQLEVAVNGEVVRTFTSYLQPWVTFNGLGVKKSEVRTVTLRHTYTDKHEWINILEVRF 468
FVEAG++T VGV A AYD RPG VGC E GC P L DGV +D ES WSCA+ IVPDGG CEI FTF +PQD+ D+QVAF + R L+V +NG+ + + SY P TFN G++++ V TVT+ D+ +WI++LEVRF
Sbjct: 251 FVEAGSKTTVGVTATAYDDRPGESAGDVGCGEMGCLPDLAHDGVGEEDTESRWSCAEEIVPDGGQCEISFTFDSPQDITDVQVAFWKGDERTRTLKVKINGDKIGEYESY--PGSTFNSFGIQENGVHTVTMESVGIDRDDWISLLEVRF 398
BLAST of mRNA_M-pyrifera_M_contig141.6175.1 vs. uniprot
Match: D7FI90_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI90_ECTSI) HSP 1 Score: 149 bits (377), Expect = 4.060e-43 Identity = 85/162 (52.47%), Postives = 100/162 (61.73%), Query Frame = 1
Query: 1 SAPCVNNFVEAGTRTIVGVWANAYDTRPGHDNNGVGCLENG---CAPKLTRDGVVDDIESMWSCAQSIVPDGGFCEIEFTFANPQDVVDIQVAFLYEADSARQLEVAVNGEVVRTFTSYLQPWVTFNGLGVKKSEVRTVTLRHTYTDKHEWINILEVRFSKT 477
S P V + VE GT+T VGV A A+D RPG N VGC E G C TRDG+V DIES WSCA S+VPD G C+IEFTFA PQ++VDIQVAF + + LEV VNGE+ T SY TFN LGV +E TV L EWI++LEV+ T
Sbjct: 13 SLPTVVDAVEVGTKTEVGVSATAHDVRPGSSGNDVGCGEVGSLGCTATNTRDGIVSDIESRWSCATSLVPDEGPCQIEFTFAEPQNIVDIQVAFWNDNERVSTLEVHVNGELTHTHESYDD---TFNTLGVTATEASTVMLESVALLSDEWISLLEVQIFVT 171
BLAST of mRNA_M-pyrifera_M_contig141.6175.1 vs. uniprot
Match: D7FI77_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI77_ECTSI) HSP 1 Score: 144 bits (364), Expect = 3.900e-41 Identity = 81/157 (51.59%), Postives = 96/157 (61.15%), Query Frame = 1
Query: 1 SAPCVNNFVEAGTRTIVGVWANAYDTRPGHDNNGVGCLENG---CAPKLTRDGVVDDIESMWSCAQSIVPDGGFCEIEFTFANPQDVVDIQVAFLYEADSARQLEVAVNGEVVRTFTSYLQPWVTFNGLGVKKSEVRTVTLRHTYTDKHEWINILEV 462
S P V+ VE GT+ VGV A A+DTRPG+ + VGC E G C TRDG+ +IES WSCA +VPD G C+IEFTFA PQ +VDIQVAF D R L V VNGE+ T SY TFN LGV +E TV L T EWI+++EV
Sbjct: 13 SLPTVDGAVEVGTKIEVGVSATAHDTRPGNSSGDVGCGEVGGLGCTATNTRDGIFSEIESRWSCATKLVPDEGPCQIEFTFAEPQHIVDIQVAFWKGNDRTRTLGVHVNGELTHTHESYTDS--TFNTLGVTANEASTVMLESTALLSDEWISLIEV 167
BLAST of mRNA_M-pyrifera_M_contig141.6175.1 vs. uniprot
Match: D7FI88_ECTSI (Similar to Pappalysin-2 (Pregnancy-associated plasma protein-A2) (PAPP-A2) (Pregnancy-associated plasma protein-E1) (PAPP-E) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI88_ECTSI) HSP 1 Score: 147 bits (372), Expect = 4.170e-41 Identity = 84/162 (51.85%), Postives = 100/162 (61.73%), Query Frame = 1
Query: 1 SAPCVNNFVEAGTRTIVGVWANAYDTRPGHDNNGVGCLENG---CAPKLTRDGVVDDIESMWSCAQSIVPDGGFCEIEFTFANPQDVVDIQVAFLYEADSARQLEVAVNGEVVRTFTSYLQPWVTFNGLGVKKSEVRTVTLRHTYTDKHEWINILEVRFSKT 477
S P V + VE GT+T VGV A A+D RPG + VGC E G C TRDG+V DIES WSCA S+VPD G C+IEFTFA PQ++VDIQVAF + + LEV VNGE+ T SY TFN LGV +E TV L EWI++LEV+ T
Sbjct: 116 SLPTVVDAVEVGTKTEVGVSATAHDVRPGSSGDDVGCGEVGGLGCTATNTRDGIVSDIESRWSCATSLVPDEGPCQIEFTFAEPQNIVDIQVAFWNDNERVSTLEVHVNGELTHTHESYDD---TFNTLGVTATEASTVMLESVALLSDEWISLLEVQIFVT 274
BLAST of mRNA_M-pyrifera_M_contig141.6175.1 vs. uniprot
Match: A0A6H5JM92_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM92_9PHAE) HSP 1 Score: 145 bits (365), Expect = 2.410e-37 Identity = 83/162 (51.23%), Postives = 98/162 (60.49%), Query Frame = 1
Query: 1 SAPCVNNFVEAGTRTIVGVWANAYDTRPGHDNNGVGCLENG---CAPKLTRDGVVDDIESMWSCAQSIVPDGGFCEIEFTFANPQDVVDIQVAFLYEADSARQLEVAVNGEVVRTFTSYLQPWVTFNGLGVKKSEVRTVTLRHTYTDKHEWINILEVRFSKT 477
S P V + VE GT+T VGV A A+D RPG VGC E G C TRDG+ DIES WSCA S+VPD G C+IEFTFA PQ++VDIQVAF + + LEV VNGE+ T SY TFN LGV +E TV L EWI++LEV+ T
Sbjct: 577 SLPTVVDAVEVGTKTEVGVSATAHDLRPGSSGGDVGCGEVGGLGCTATNTRDGIFSDIESRWSCATSLVPDEGPCQIEFTFAEPQNIVDIQVAFWNDNERVSTLEVHVNGELTHTHESYDD---TFNTLGVTATEASTVMLESVALLSDEWISLLEVQIFVT 735
BLAST of mRNA_M-pyrifera_M_contig141.6175.1 vs. uniprot
Match: D7G5F4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5F4_ECTSI) HSP 1 Score: 135 bits (340), Expect = 9.890e-37 Identity = 77/153 (50.33%), Postives = 94/153 (61.44%), Query Frame = 1
Query: 7 PCVNNFVEAGTRTIVGVWANAYDTRPGHDNNG-VGCLENGCAPKLTRDGVVDDIESMWSCAQSIVPDGGFCEIEFTFANPQDVVDIQVAFLYEADSARQLEVAVNGEVVRTFTSYLQPWVTFNGLGVKKSEVRTVTLRHTYTDKHEWINILEV 462
P V+ VE GT+T VGV + A+D RPG D G VG L GC TRDG+ +IES WSCA +V D G C+IEFTFA PQ +VDIQVAF + R LEV +NGE+ T SY TFN LGV ++V TV L EWI+++EV
Sbjct: 83 PTVDGAVEVGTKTEVGVSSTAHDVRPGDDGCGEVGGL--GCTAANTRDGIFSEIESRWSCATKLVDDEGPCQIEFTFAEPQTIVDIQVAFWKGNERTRTLEVYINGEMTHTHESYAD--ATFNTLGVTATDVSTVMLESVALLSDEWISLIEV 231
BLAST of mRNA_M-pyrifera_M_contig141.6175.1 vs. uniprot
Match: D7G0S3_ECTSI (LNR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0S3_ECTSI) HSP 1 Score: 136 bits (342), Expect = 2.700e-36 Identity = 75/155 (48.39%), Postives = 95/155 (61.29%), Query Frame = 1
Query: 7 PCVNNFVEAGTRTIVGVWANAYDTRPGHDNNGVGCLE---NGCAPKLTRDGVVDDIESMWSCAQSIVPDGGFCEIEFTFANPQDVVDIQVAFLYEADSARQLEVAVNGEVVRTFTSYLQPWVTFNGLGVKKSEVRTVTLRHTYTDKHEWINILEV 462
P V++ VE GT+T V V A A+D R G + VGC E NGCA RDG+ +IES WSCA ++ D G C+IEF+FA PQ++VDIQVAF + R LEV VNGE+ T SY TFN LGV +E TV L +EWI+++EV
Sbjct: 148 PTVDDAVEVGTKTEVSVSATAHDVRAGRSSGEVGCGEAGGNGCAANNARDGISTEIESRWSCAAKLLDDEGPCQIEFSFAEPQNIVDIQVAFWKGNERVRTLEVYVNGELTHTHESYADS--TFNTLGVTANEANTVMLESVSLLSNEWISLIEV 300
BLAST of mRNA_M-pyrifera_M_contig141.6175.1 vs. uniprot
Match: D7FI87_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI87_ECTSI) HSP 1 Score: 139 bits (350), Expect = 1.550e-35 Identity = 80/157 (50.96%), Postives = 96/157 (61.15%), Query Frame = 1
Query: 1 SAPCVNNFVEAGTRTIVGVWANAYDTRPGHDNNGVGCLENG---CAPKLTRDGVVDDIESMWSCAQSIVPDGGFCEIEFTFANPQDVVDIQVAFLYEADSARQLEVAVNGEVVRTFTSYLQPWVTFNGLGVKKSEVRTVTLRHTYTDKHEWINILEV 462
S P V + VE GT+T VGV A A+D RP ++ VGC + G C TRDG+V DIES WSCA +VPD G C+IEF+FA PQ+VVDIQVAF + R L V VNGE+ T SY TFN LGV +E TV L EWI++LEV
Sbjct: 451 SLPTVIDAVEVGTKTEVGVSATAHDVRPRSSSDDVGCGQVGGLGCTATNTRDGIVSDIESRWSCATILVPDEGACQIEFSFAEPQNVVDIQVAFWKGNERTRTLWVHVNGELTHTHESYADS--TFNTLGVTATEASTVMLESVALLSDEWISLLEV 605
BLAST of mRNA_M-pyrifera_M_contig141.6175.1 vs. uniprot
Match: D7FI81_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI81_ECTSI) HSP 1 Score: 134 bits (336), Expect = 2.250e-35 Identity = 73/155 (47.10%), Postives = 94/155 (60.65%), Query Frame = 1
Query: 7 PCVNNFVEAGTRTIVGVWANAYDTRPGHDNNGVGCLE---NGCAPKLTRDGVVDDIESMWSCAQSIVPDGGFCEIEFTFANPQDVVDIQVAFLYEADSARQLEVAVNGEVVRTFTSYLQPWVTFNGLGVKKSEVRTVTLRHTYTDKHEWINILEV 462
P V E GT T V V A A+DTRPG + VGC E +GCA DG++ +IES WSCA +VPD G C+IEF+FA+PQD+VDIQVAF + R +++ ++GE+ T SY TFN LGV +E TV L EWI++LEV
Sbjct: 151 PAVAIAYEVGTMTEVNVSATAHDTRPGSSSGDVGCGETGGDGCAAIKAHDGIISEIESRWSCATMLVPDEGPCQIEFSFADPQDIVDIQVAFWEGNERTRTVDIFIDGELTHTHESYADS--TFNTLGVTATEASTVMLESVDLLSDEWISLLEV 303
BLAST of mRNA_M-pyrifera_M_contig141.6175.1 vs. uniprot
Match: D7G4F9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4F9_ECTSI) HSP 1 Score: 135 bits (340), Expect = 1.270e-34 Identity = 77/153 (50.33%), Postives = 94/153 (61.44%), Query Frame = 1
Query: 7 PCVNNFVEAGTRTIVGVWANAYDTRPGHDNNG-VGCLENGCAPKLTRDGVVDDIESMWSCAQSIVPDGGFCEIEFTFANPQDVVDIQVAFLYEADSARQLEVAVNGEVVRTFTSYLQPWVTFNGLGVKKSEVRTVTLRHTYTDKHEWINILEV 462
P V+ VE GT+T VGV + A+D RPG D G VG L GC TRDG+ +IES WSCA +V D G C+IEFTFA PQ +VDIQVAF + R LEV +NGE+ T SY TFN LGV ++V TV L EWI+++EV
Sbjct: 334 PTVDGAVEVGTKTEVGVSSTAHDVRPGDDGCGEVGGL--GCTAANTRDGIFSEIESRWSCATKLVDDEGPCQIEFTFAEPQTIVDIQVAFWKGNERTRTLEVYINGEMTHTHESYAD--ATFNTLGVTATDVSTVMLESVALLSDEWISLIEV 482 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig141.6175.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig141.6175.1 >prot_M-pyrifera_M_contig141.6175.1 ID=prot_M-pyrifera_M_contig141.6175.1|Name=mRNA_M-pyrifera_M_contig141.6175.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=159bp SAPCVNNFVEAGTRTIVGVWANAYDTRPGHDNNGVGCLENGCAPKLTRDGback to top mRNA from alignment at M-pyrifera_M_contig141:13927..14728+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig141.6175.1 ID=mRNA_M-pyrifera_M_contig141.6175.1|Name=mRNA_M-pyrifera_M_contig141.6175.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=802bp|location=Sequence derived from alignment at M-pyrifera_M_contig141:13927..14728+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig141:13927..14728+ >mRNA_M-pyrifera_M_contig141.6175.1 ID=mRNA_M-pyrifera_M_contig141.6175.1|Name=mRNA_M-pyrifera_M_contig141.6175.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=954bp|location=Sequence derived from alignment at M-pyrifera_M_contig141:13927..14728+ (Macrocystis pyrifera P11B4 male)back to top |