mRNA_M-pyrifera_M_contig14070.6169.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig14070.6169.1 vs. uniprot
Match: D7FN53_ECTSI (PTB (HnRNP) homolog family member (Ptb-1) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN53_ECTSI) HSP 1 Score: 395 bits (1015), Expect = 1.570e-122 Identity = 378/703 (53.77%), Postives = 416/703 (59.17%), Query Frame = 1
Query: 1 RFRSSDKK-STGASPGGATKSRSRMPRLDPLHIQALTAPAAKKSARYRGPKGE--VEGNGESGKDGGAAXXXXXXXXXXXXXXXXXXXIGDG-VLPGFVKRLGDGVXXXXXXXXXXKKNANKREAAEMLGPDAADQLAAATAKVRVSDLAEEDGEGKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGDGEDVSSKGGKATPLGAEGNGEGKVAGGGNGSPAAGGAIHEDTEGEVDVVVAAVAGGEKGGRGXGKETAGAGATVGGSVLDVGGEGWAVVGM-TRSGASRRRSSSNGGKEEGKPVEKAGS----------------AEAEAVESQGEVTTEPREEARGAGGGESVQREXXXXXXXEKDEVG----------------------EGGGDPDSGASGXXXXXXXXXXXXXKVDEPVEGDKGGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWAAAAPAARSPILMILHVDTHELSPGALCQLFGLYGDVMKVKLVTSRGMALVQMKYPVQAVNAQRLLDQTPLCGMILEVKASSQWTINDPTATDFSLYQGVHRYEMAPSPEDSRYRDSLSPPCSTLVVDNVSPDVSTEAITAIFAKHGVVSSVDLDTNAEAPPDASSVLPAAGSSSNPEPKPSVQALVHMEADGRVGATEAAVHALIMIHNLTVHERRLRVSFLSGERHVGK 1980
RFRSSDKK +T A+PGGA K RSR+PRLDP+ IQALTA AA R PK E VEG ESG + GDG L GFVK G G K ANKREAAEMLGPDA +QLAAATAKV + KRXXXXXXXXXXXXXXXXXXXXXXXXX DGDGED S GK G + S AG + E AV G +G +G GK TAGAG GGSV GE V G+ TR G RS S GG ++ P +K + AE E E E EEA G E E D E G + D XXXX + + EG+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX WAAA P ARSPI+M+ HVDT E+SPGA C LFGLYGDVMKVKLV SRGMALVQM+YPVQA NAQRLLDQTPL GM +EVK SSQWTINDPTATDFS QG+HR+ P+PED RYRDSLSPPC TLVVDNVSPDV+ E IT+IFAKHG VSSVDLDT+A+AP D +S L + G S+ KPSVQALVHMEADG+V ATEAAVHALIM HNLT+ ERRLRVSFLSGE H+ K
Sbjct: 275 RFRSSDKKPTTNAAPGGAIKPRSRVPRLDPVQIQALTAAAAVAKKSVRQPKSEENVEGK-ESGSEATVVAGRGGGG-------------GDGKTLSGFVKE-GAG-----SSGGSGNKTANKREAAEMLGPDATEQLAAATAKVFLE---------KRXXXXXXXXXXXXXXXXXXXXXXXXXRVSDDGDGEDASLSAGKDVEAG-------------DSSEKAG-----SRQDESKRKACAVEGDNEGEKGSGKRTAGAG---GGSV----GEEAPVEGVVTRRGG--LRSGSTGGGKDFPPEDKTKAEDVXXXXXXXXXGVEVAEGEDPSKSQETGEEKVEEAAQCDGPTGNAEEGKQAENVENDGETXXXXXXXXXXXXXXXXXXXXKLEAGDEVDDXXXXXXXXEGGEKQGEGEAGDGAEGETKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEERVDVGAWAAAGPVARSPIVMVRHVDTLEVSPGAFCHLFGLYGDVMKVKLVASRGMALVQMRYPVQAANAQRLLDQTPLSGMTIEVKPSSQWTINDPTATDFSGVQGLHRFSTTPTPEDKRYRDSLSPPCPTLVVDNVSPDVTAETITSIFAKHGAVSSVDLDTHAKAPLDTASALASTGGSNAEPTKPSVQALVHMEADGKVRATEAAVHALIMTHNLTLAERRLRVSFLSGEHHIEK 921
BLAST of mRNA_M-pyrifera_M_contig14070.6169.1 vs. uniprot
Match: A0A6H5KZ42_9PHAE (RRM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ42_9PHAE) HSP 1 Score: 373 bits (957), Expect = 3.870e-112 Identity = 384/714 (53.78%), Postives = 422/714 (59.10%), Query Frame = 1
Query: 1 RFRSSDKK-STGASPGGATKSRSRMPRLDPLHIQALTAPAAKKSARYRGPKGE--VEGNGESGKDGGAAXXXXXXXXXXXXXXXXXXXIGDG-VLPGFVKRLGDGVXXXXXXXXXXKKNANKREAAEMLGPDAADQLAAATAKVRVSDLAEEDGEGKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGDGEDVSSKGGKATPLGAEGNGEGKVAGGGNGSPAAGGAIHEDTEGEVDVVVAAVAGGEKGGRGXGKETAGAGATVGGSVLDVGGEGWAVVGM-TRSGASRRRSSSNGGKEEGKPVEKAGSA--------EAEAVE-----------SQGEVTTEPREEARGAGG----GESVQREXXXXXXXEKDEVGEGG-----------------GDPDSGAS-GXXXXXXXXXXXXXKVDEPVEGDKGGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWAAAAPAARSPILMILHVDTHELSPGALCQLFGLYGDVMKVKLVTSRGMALVQMKYPVQAVNAQRLLDQTPLCGMILEVKASSQWTINDPTATDFSLYQGVHR--------YEMAPSPEDSRYRDSLSPPCSTLVVDNVSPDVSTEAITAIFAKHGVVSSVDLDTNAEAPPDASSVLPAAGSSSNPEPKPSVQALVHMEADGRVGATEAAVHALIMIHNLTVHERRLRVSFLSGERHVGK 1980
RFRSSDKK +T A+PGGA K RSR+PRLDP+ IQALTA AA R PK E VEG K A GDG L GFVK G G K ANKREAAEMLGPDA +QLAAATAKV + KRXXXXXXXXXXXXXXXXXXXXXXXXX DGDGE+ S L AE K G+ AG E V V GEKG G K TAGAG GGSV GE V G+ TR G RS S GG ++ P +KA A +A+ VE GE E + G G GE XXXXXXX + EV GG GD G S G K + EG+ + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX WAAA P ARSPI+M+ HVDT E+SPGA C LFGLYGDVMKVK+V SRGMALVQM+YPVQA NAQRLLDQTPL GM LEVK SSQWTINDPTATDFS QG+HR + P+P+D RYRDSLSPPC TLVVDNVSPDV+ E IT+IFAKHG VSSVDLDT+A+AP D S + G S+ KPSVQALVHMEADG+V ATEAAVHALIM HNLT+ ERRLRVSFLSG+ H+ K
Sbjct: 491 RFRSSDKKPTTNAAPGGAIKPRSRVPRLDPVQIQALTAAAALAKKSVRQPKSEEIVEGKESGSKTATLAGRGGGG--------------GDGKTLSGFVKE-GAG-----SSGGSGNKTANKREAAEMLGPDATEQLAAATAKVFLE---------KRXXXXXXXXXXXXXXXXXXXXXXXXXRVSDDGDGEEAS--------LSAE-----KDVEAGDSLEKAGSRQDESKRKACTVEVDDE--GEKGYSG--KRTAGAG---GGSV----GEEALVEGVVTRRGG--LRSGSRGGGKDFPPEDKAKGAGVALEEKAKADGVEVAEGKDPSTSQETGEEKVEGATQCDGTTGNAEEGEQXXXXXXXXXXXXEPEVEAGGEDKXXXXXXXXXXKLEAGDEVEGRSKGRCEVEAGEKQGERKASDGAEGET--KVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEERVDVGAWAAAGPVARSPIVMVRHVDTLEVSPGAFCHLFGLYGDVMKVKIVASRGMALVQMRYPVQAANAQRLLDQTPLSGMTLEVKPSSQWTINDPTATDFSGVQGLHRQSCWDRFAFSTTPTPDDKRYRDSLSPPCPTLVVDNVSPDVTAETITSIFAKHGPVSSVDLDTHAKAPLDTISARASTGGSNAEPTKPSVQALVHMEADGKVRATEAAVHALIMTHNLTLAERRLRVSFLSGKHHIEK 1147
BLAST of mRNA_M-pyrifera_M_contig14070.6169.1 vs. uniprot
Match: A0A7S3UWL0_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWL0_HETAK) HSP 1 Score: 104 bits (260), Expect = 5.120e-20 Identity = 61/146 (41.78%), Postives = 86/146 (58.90%), Query Frame = 1
Query: 1312 SPILMILHVDTHELSPGALCQLFGLYGDVMKVKLVTSRGMALVQMKYPVQAVNAQRLLDQTPLCGMILEVKASSQWTINDPTATDFSLYQGVHRYEMAPSPEDSRYRDSLSPPCSTLVVDNVSPDVSTEAITAIFAKHGVVSSVDL 1749
SP++++ + D + L LFGLYGDV+KVK++T + ALVQ +P+QA NA L+ TPL G L S+ + I D +A+DFS VHRY P D Y+ +L PP L V NV + + EA+ A++ + G VSSV L
Sbjct: 311 SPLVLVQNADPAHVRGEHLAALFGLYGDVLKVKVMTHKACALVQYAHPLQAANAMAFLNDTPLAGQTLRCVRSTSFEIKDQSASDFSAVP-VHRYRGVERPLDPAYQRNLVPPGPRLAVANVG-EATEEALRALYGRFGAVSSVAL 454
BLAST of mRNA_M-pyrifera_M_contig14070.6169.1 vs. uniprot
Match: I2CQY0_NANGC (Polypyrimidine tract binding protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CQY0_NANGC) HSP 1 Score: 100 bits (248), Expect = 2.500e-19 Identity = 75/223 (33.63%), Postives = 115/223 (51.57%), Query Frame = 1
Query: 1285 WAAAAPAARSPILMILHVDTHELSPGALCQLFGLYGDVMKVKLVTSRGMALVQMKYPVQAVNAQRLLDQTPLCGMILEVKASSQWTINDPTATDFSLYQGVHRYEMAPSPEDSRYRDSLSPPCSTLVVDNVSPDVSTEAITAIFAKHGVVSSVDLDTNAEAPPDASSVLPAAGSSSNPEPKPSVQALVHMEADGRVGATEAAVHALIMIHNLTVHERRLRVSF 1953
W+A P + +L++ ++ + AL LFGLYGDV +VK++ + A+V+M+ PVQA A+ LLD +PL G +++VK+S+Q TI D A DF+ + +H Y SP Y +L P + L + N+ D S ++ + V V + +LP SS+ P ALV + + EAAVHA I++HN V R L V+F
Sbjct: 123 WSARLPGTDTCVLIVQGLNMEMVGAEALAALFGLYGDVRRVKMMPEQDSAIVEMERPVQAYVAKWLLDASPLGGRVIKVKSSTQDTIRDVQAQDFTAFP-LHGYRQYASPRHPSYLANLVEPTAVLRIANIDWDTSEITFRSLLTQQEGVMGV------------TRLLP----SSHTSP-----ALVSFQ------SVEAAVHACILLHNQEVDGRLLYVTF 317
BLAST of mRNA_M-pyrifera_M_contig14070.6169.1 vs. uniprot
Match: A0A7S2WBW3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WBW3_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 3.860e-18 Identity = 54/131 (41.22%), Postives = 75/131 (57.25%), Query Frame = 1
Query: 1285 WAAAAPAARSP-----ILMILHVDTHELSPGALCQLFGLYGDVMKVKLVTSRGMALVQMKYPVQAVNAQRLLDQTPLCGMILEVKASSQWTINDPTATDFSLYQGVHRYEMAPSPEDSRYRDSLSPPCSTL 1662
W A P A + +L + +VDT+ + L LFG+YGDV+KVK+++SR AL+Q YP A A++ LD PL G L + SSQ INDP+A D + + R+ SP D Y+D L PP +TL
Sbjct: 56 WLEALPEANTEDGCTRVLHVTNVDTNYCTTDMLAILFGVYGDVIKVKILSSREAALIQFAYPAMAFFARQHLDGCPLLGRNLAIAYSSQVGINDPSAADLTSRPTLRRFSATTSPSDPMYQDHLVPPTNTL 186
BLAST of mRNA_M-pyrifera_M_contig14070.6169.1 vs. uniprot
Match: A0A7S3UV41_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UV41_HETAK) HSP 1 Score: 78.6 bits (192), Expect = 3.060e-12 Identity = 42/105 (40.00%), Postives = 62/105 (59.05%), Query Frame = 1
Query: 1312 SPILMILHVDTHELSPGALCQLFGLYGDVMKVKLVTSRGMALVQMKYPVQAVNAQRLLDQTPLCGMILEVKASSQWTINDPTATDFSLYQGVHRYEMAPSPEDSR 1626
SP++++ + D + L LFGLYGDV+KVK++T + ALVQ +P+QA NA L+ TPL G L S+ + I D +A+DF +G+ PS + SR
Sbjct: 164 SPLVLVQNADPAHVRGEHLAALFGLYGDVLKVKVMTHKACALVQYAHPLQAANAMAFLNDTPLAGQTLRCVRSTSFEIKDQSASDFRWPRGLPLSPPPPSGQPSR 268
BLAST of mRNA_M-pyrifera_M_contig14070.6169.1 vs. uniprot
Match: T1ESN3_HELRO (RRM domain-containing protein n=1 Tax=Helobdella robusta TaxID=6412 RepID=T1ESN3_HELRO) HSP 1 Score: 78.2 bits (191), Expect = 1.300e-11 Identity = 49/155 (31.61%), Postives = 83/155 (53.55%), Query Frame = 1
Query: 1318 ILMILHVDTHELSPGALCQLFGLYGDVMKVKLV-TSRGMALVQMKYPVQAVNAQRLLDQTPLCGMILEVKASSQWTINDPTATDFSLY-------QGVHRYEMAPSPEDSRYRDSLSPPCSTLVVDNVSPDVSTEAITAIFAKHGVVSSVDLDTN 1758
++++ ++D +++P AL LFG+YGDV+KVK++ + AL+Q P+QA A LD+ L G +++V S + P F + +HR++ P Y +++ PP +TL + N+ P S E + A+F+KHG V TN
Sbjct: 168 VVLVSNLDEEKVNPDALFTLFGVYGDVIKVKIMFNKKDTALIQFNDPMQAQTAMLNLDKLKLWGKVIKVTPSKHTIVQMPKDGQFDINLTKDYTNSTLHRFK---KPNSKNY-NNIFPPAATLHLSNI-PSTSKETLVALFSKHGTVVGFKFFTN 317
BLAST of mRNA_M-pyrifera_M_contig14070.6169.1 vs. uniprot
Match: A0A7M7PLP3_STRPU (Uncharacterized protein n=7 Tax=Echinacea TaxID=7674 RepID=A0A7M7PLP3_STRPU) HSP 1 Score: 75.1 bits (183), Expect = 1.980e-10 Identity = 72/245 (29.39%), Postives = 108/245 (44.08%), Query Frame = 1
Query: 1288 AAAAPAARSP---------ILMILHVDTHELSPGALCQLFGLYGDVMKVKLV-TSRGMALVQMKYPVQAVNAQRLLDQTPLCGMILEVKASSQWTINDPT--------ATDFSLYQGVHRYEMAPSPEDSRYRDSLSPPCSTLVVDNVSPDVSTEAITAIFAKHGVVSSVDLDTNAEAPPDASSVLPAAGSSSNPEPKPSVQALVHMEADGRVGATEAAVHALIMIHNLTVHE-RRLRVSFLSGE 1965
AAAA R P ++++ ++ ++P AL LFG+YGDV +VK++ R AL+QM P Q+ A + L L G + V AS + P DFS +HR++ P + + + PP STL + N+ P V E + F++HG V++ PK AL+ M G+ E A+HALI +HN + E LRVSF +
Sbjct: 344 AAAAQGMRMPGMYMPSGSSVILVSNLTPELVTPQALFTLFGVYGDVQRVKILYEKRDNALIQMSDPNQSQLAMKHLSGVKLYGKQIRVTASKHQMVQLPKEGQPDAGLTKDFST-SPLHRFK---KPGSKNFLN-IYPPSSTLHLSNIPPTVDEETLKEAFSQHGTVANFKFF-----------------------PKDRKMALLQM------GSVEEAIHALIAMHNYQLAESNHLRVSFSKAQ 554
BLAST of mRNA_M-pyrifera_M_contig14070.6169.1 vs. uniprot
Match: Q2I2V8_PARLI (Polypyrimidine tract binding protein n=1 Tax=Paracentrotus lividus TaxID=7656 RepID=Q2I2V8_PARLI) HSP 1 Score: 74.7 bits (182), Expect = 2.920e-10 Identity = 72/245 (29.39%), Postives = 108/245 (44.08%), Query Frame = 1
Query: 1288 AAAAPAARSP---------ILMILHVDTHELSPGALCQLFGLYGDVMKVKLV-TSRGMALVQMKYPVQAVNAQRLLDQTPLCGMILEVKASSQWTINDPT--------ATDFSLYQGVHRYEMAPSPEDSRYRDSLSPPCSTLVVDNVSPDVSTEAITAIFAKHGVVSSVDLDTNAEAPPDASSVLPAAGSSSNPEPKPSVQALVHMEADGRVGATEAAVHALIMIHNLTVHE-RRLRVSFLSGE 1965
AAAA R P ++++ ++ ++P AL LFG+YGDV +VK++ R AL+QM P QA A + L L G + V AS + P DFS +HR++ P + + + PP STL + N+ P V + + F++HG V++ PK AL+ M G+ E A+HALI +HN + E LRVSF +
Sbjct: 407 AAAAQGMRLPGMYMQSGTAVILVSNLTPELVTPQALFTLFGVYGDVQRVKILYEKRDNALIQMSDPNQAQLAMKHLSGVKLYGKQIRVTASKHQMVQLPKEGQPDAGLTKDFST-SPLHRFK---KPGSKNFLN-IYPPSSTLHLSNIPPTVDEDTLKEAFSQHGTVANFKFF-----------------------PKDRKMALLQM------GSVEEAIHALIAMHNYQLAESNHLRVSFSKAQ 617
BLAST of mRNA_M-pyrifera_M_contig14070.6169.1 vs. uniprot
Match: A0A1B6CN94_9HEMI (Uncharacterized protein n=4 Tax=Clastoptera arizonana TaxID=38151 RepID=A0A1B6CN94_9HEMI) HSP 1 Score: 74.3 bits (181), Expect = 3.410e-10 Identity = 70/230 (30.43%), Postives = 104/230 (45.22%), Query Frame = 1
Query: 1306 ARSPILMILHVDTHELSPGALCQLFGLYGDVMKVKLV-TSRGMALVQMKYPVQAVNAQRLLDQTPLCGMILEVKASSQWTIN-------DPTATDFSLYQGVHRYEMAPSPEDSRYRDSLSPPCSTLVVDNVSPDVSTEAITAIFAKHGVVSSVDLDTNAEAPPDASSVLPAAGSSSNPEPKPSVQALVHMEADGRV-----GATEAAVHALIMIHNLTVHERR-LRVSF 1953
A + +L+I +++ +SP AL LFG+YGDV +VK++ + AL+QM P QA A LD+ L G + V AS T+ D T +HR++ P Y++ + PP +TL + N+ P+VS E + F K+G SV+A D R+ G+ E AV ALI +HN + E+ LRVSF
Sbjct: 352 ATTCVLLISNLNEEVISPDALFTLFGVYGDVQRVKILYNKKDSALIQMAEPHQAHLAMTHLDKLRLFGKQMRVMASKHQTVQLPKDGQPDSGLTKDYTASNLHRFK---KPGSKNYQN-IYPPSATLHLSNIPPNVSEEEMKEAFVKNGF---------------------------------SVKAFKFFPKDKRMALLQLGSIEDAVAALIKMHNYQLSEQNHLRVSF 544 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig14070.6169.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig14070.6169.1 >prot_M-pyrifera_M_contig14070.6169.1 ID=prot_M-pyrifera_M_contig14070.6169.1|Name=mRNA_M-pyrifera_M_contig14070.6169.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=661bp RFRSSDKKSTGASPGGATKSRSRMPRLDPLHIQALTAPAAKKSARYRGPKback to top mRNA from alignment at M-pyrifera_M_contig14070:2736..8442- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig14070.6169.1 ID=mRNA_M-pyrifera_M_contig14070.6169.1|Name=mRNA_M-pyrifera_M_contig14070.6169.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=5707bp|location=Sequence derived from alignment at M-pyrifera_M_contig14070:2736..8442- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig14070:2736..8442- >mRNA_M-pyrifera_M_contig14070.6169.1 ID=mRNA_M-pyrifera_M_contig14070.6169.1|Name=mRNA_M-pyrifera_M_contig14070.6169.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=3966bp|location=Sequence derived from alignment at M-pyrifera_M_contig14070:2736..8442- (Macrocystis pyrifera P11B4 male)back to top |