mRNA_M-pyrifera_M_contig1406.6167.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig1406.6167.1
Unique NamemRNA_M-pyrifera_M_contig1406.6167.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig1406.6167.1 vs. uniprot
Match: A0A1D8D7E6_9EUKA (Uncharacterized protein n=1 Tax=Paramoeba pemaquidensis TaxID=180228 RepID=A0A1D8D7E6_9EUKA)

HSP 1 Score: 489 bits (1260), Expect = 1.080e-170
Identity = 236/253 (93.28%), Postives = 249/253 (98.42%), Query Frame = 1 
Query:    1 MGPSINLDQLIKKKFLFNKVQYSSRFGCHNNYYSNLINKKFMIVNLNYLIISLKKMMFITYKTSLFRGIFLTYISKSCITEFEKIFYNIDD*QPVQDVGYGYLKKRELVDDENINILEVAKG*FKYQEYFSVTHDSKPNFYVVLTNGLFGFISNFKKVFLKHVRRLKVEK*PTDYARLTLPSIVFITKTCYNEYYELFRVFLKKRIICIRTFSLVEEVNINLGYCLSVNDCSKIYDICENIFYLNSIYRKNKW 759
            MGP++NLDQ+IKK FLFNKVQYSSRFGCHN+YYSNLINKKFMIVNLNYLIISLKKMMFITYKTSLFRGIFLTYISKSCITEFEKIFYNIDD QPV+DVGYGYL+++EL+DDENIN+LEVAKG FKYQEYFSVTHD+KPNFYVVLTNGLFGFISNFKKVFLKH+RRLKVEK PTDYARLTLPSIVFITKTCYNEYYELFRVFLKKRI+CIRTFSLVEEVNINLGYCLSVNDCSKIYDICENIFYLNSIYRKNKW
Sbjct:    1 MGPTLNLDQIIKKNFLFNKVQYSSRFGCHNSYYSNLINKKFMIVNLNYLIISLKKMMFITYKTSLFRGIFLTYISKSCITEFEKIFYNIDDWQPVKDVGYGYLRQQELIDDENINVLEVAKGWFKYQEYFSVTHDTKPNFYVVLTNGLFGFISNFKKVFLKHIRRLKVEKWPTDYARLTLPSIVFITKTCYNEYYELFRVFLKKRIVCIRTFSLVEEVNINLGYCLSVNDCSKIYDICENIFYLNSIYRKNKW 253
[Close]
BLAST of mRNA_M-pyrifera_M_contig1406.6167.1 vs. uniprot
Match: A0A1D8DA78_9EUKA (Ribosomal protein small subunit 4 n=1 Tax=Paramoeba pemaquidensis TaxID=180228 RepID=A0A1D8DA78_9EUKA)

HSP 1 Score: 454 bits (1168), Expect = 6.770e-157
Identity = 234/242 (96.69%), Postives = 236/242 (97.52%), Query Frame = 3 
Query:  756 MVTKAFYKISKLTKLVKLNKSDITGSLISKRRRG*EII*ILYYQSLHRRDKKKYNKNNLFRDFFRMMYIPKPIHQKRKSRFTKYFYHRMQFRLFYGCLKTKYIKKAIMLSQKKKNKISYFIYLMELRLDVILYRLNLTTTIREARQLVLHGKVKVNNLIIKNPSYALRLNDLLSFKKSSIYFLKKKIYKNIKQGNFIISSIPNYLEYSYKNLKFKVTYFNIMDLPKISKLNRNAYSHLIGLN 1481
            MVTKAFYKI KLTKLVKLNK DITGSLISKRRRG EII +LYYQSLHRRDKKKYNKNNLFRDFFRMMYIPKPIHQKRKSRFTKYFYHRMQFRLFYGCLKTKYIKKAIMLSQKK NKISYFIYLMELRLDVILYRLNLT TIREARQLVLHGKVKVNNLIIKNPSYALRL+DLLSFKKSSIYFLKKKIYKNIKQGNFIISSIPNYLEYSYKNLKFKVTYFNIMDLPKISKLNRNAYSHLIGLN
Sbjct:    1 MVTKAFYKIFKLTKLVKLNKGDITGSLISKRRRGWEIIWMLYYQSLHRRDKKKYNKNNLFRDFFRMMYIPKPIHQKRKSRFTKYFYHRMQFRLFYGCLKTKYIKKAIMLSQKKLNKISYFIYLMELRLDVILYRLNLTATIREARQLVLHGKVKVNNLIIKNPSYALRLDDLLSFKKSSIYFLKKKIYKNIKQGNFIISSIPNYLEYSYKNLKFKVTYFNIMDLPKISKLNRNAYSHLIGLN 242
[Close]
BLAST of mRNA_M-pyrifera_M_contig1406.6167.1 vs. uniprot
Match: A0A5P8HBE7_9EUKA (Ribosomal protein S4 n=1 Tax=Paramoeba aparasomata TaxID=2583407 RepID=A0A5P8HBE7_9EUKA)

HSP 1 Score: 375 bits (963), Expect = 8.100e-126
Identity = 180/241 (74.69%), Postives = 222/241 (92.12%), Query Frame = 3 
Query:  756 MVTKAFYKISKLTKLVKLNKSDITGSLISKRRRG*EII*ILYYQSLHRRDKKKYNKNNLFRDFFRMMYIPKPIHQKRKSRFTKYFYHRMQFRLFYGCLKTKYIKKAIMLSQKKKNKISYFIYLMELRLDVILYRLNLTTTIREARQLVLHGKVKVNNLIIKNPSYALRLNDLLSFKKSSIYFLKKKIYKNIKQGNFIISSIPNYLEYSYKNLKFKVTYFNIMDLPKISKLNRNAYSHLIGL 1478
            MV K+FYKI+KLTKLV+LNK D+ G+LI++RRRG EII +LYYQ+L + ++KKYNKNNL+RDFFRMMYIPKPI+QKRKSR+T+YFYHR+QF+LFYGCLKTKY+K AI+LS+KKKN ISYFIYLMELRLDV+++RLNLT TIREARQLVLHGK+ VN LIIKNPSY L++NDLL+FKKS +Y  KK+++ NIK+G+FIISSIPNY+EYS+++LKFK TYFN+MD+PK+S LNRNAYSHL+GL
Sbjct:    1 MVNKSFYKIAKLTKLVRLNKIDLLGNLINRRRRGWEIIWMLYYQTLPKHEQKKYNKNNLYRDFFRMMYIPKPIYQKRKSRYTRYFYHRLQFKLFYGCLKTKYVKNAIILSKKKKNSISYFIYLMELRLDVVIFRLNLTPTIREARQLVLHGKILVNYLIIKNPSYVLKVNDLLTFKKSLVYGFKKRMFLNIKRGSFIISSIPNYVEYSFRHLKFKFTYFNVMDIPKVSALNRNAYSHLLGL 241
[Close]
BLAST of mRNA_M-pyrifera_M_contig1406.6167.1 vs. uniprot
Match: A0A5P8HBC0_9EUKA (Uncharacterized protein n=1 Tax=Paramoeba aparasomata TaxID=2583407 RepID=A0A5P8HBC0_9EUKA)

HSP 1 Score: 353 bits (907), Expect = 3.650e-117
Identity = 173/254 (68.11%), Postives = 207/254 (81.50%), Query Frame = 1 
Query:    1 MGPSINLDQLIKKKFLFNKVQYSSRFGCHNNYYSNLINKKFMIVNLNYLIISLKKMMFITYKTSLFRGIFLTYISKSCITEFEKIFYNIDD*QPVQDVGYGYLKKRELVDD-ENINILEVAKG*FKYQEYFSVTHDSKPNFYVVLTNGLFGFISNFKKVFLKHVRRLKVEK*PTDYARLTLPSIVFITKTCYNEYYELFRVFLKKRIICIRTFSLVEEVNINLGYCLSVNDCSKIYDICENIFYLNSIYRKNKW 759
            M   +NL+QLIKK FLFNKVQ+SSRFGC+N  YS  +NKKFM+++LN+LIISLKKM+FITYK SLFRGIFLTY+SK  + E EK+FYNI D  PV + GYG+  K+ L+   E  N LE A    KYQEYF +T D   NFY+VLTNGLFGF+SNF+K+FLKH+  ++ E  PT+Y+RL LP+IVFITK CYNEYY+LFR+FLKK+ ICIRTFSLVEEVNINLGYCLSVNDCSKIYDICE++F+LN IY KNKW
Sbjct:    1 MSSYLNLNQLIKKHFLFNKVQFSSRFGCYNTNYSIFVNKKFMVISLNFLIISLKKMLFITYKVSLFRGIFLTYVSKESLNEGEKLFYNIYDKSPVINWGYGFFAKKRLIKKKEKKNFLEKAIAWEKYQEYFLLTEDRNVNFYLVLTNGLFGFVSNFQKIFLKHLSNVEKEDWPTNYSRLILPNIVFITKNCYNEYYQLFRIFLKKKNICIRTFSLVEEVNINLGYCLSVNDCSKIYDICESLFWLNYIYDKNKW 254
[Close]
BLAST of mRNA_M-pyrifera_M_contig1406.6167.1 vs. uniprot
Match: S8D0T5_9LAMI (S4 domain-containing protein (Fragment) n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8D0T5_9LAMI)

HSP 1 Score: 91.3 bits (225), Expect = 8.230e-19
Identity = 48/90 (53.33%), Postives = 66/90 (73.33%), Query Frame = 3 
Query: 1017 RMQFRLFYGCLKTKYIKKAIMLSQKKKNKISYFIYLMELRLDVILYRLNLTTTIREARQLVLHGKVKVNNLIIKNPSYALRLNDLLSFKK 1286
            R QFRLFY  +K K ++K I+ S KKK+ ++ F+Y +E R+DV+L+RLN  ++IREARQ +LHG V VNN +IK+ SY L   D L+FKK
Sbjct:    1 RQQFRLFYSFIKIKALRKIILKSFKKKDSVNAFVYFLESRIDVLLFRLNFFSSIREARQKILHGNVLVNNKVIKHFSYNLGEGDCLTFKK 90
[Close]
BLAST of mRNA_M-pyrifera_M_contig1406.6167.1 vs. uniprot
Match: A0A0Y0BY36_9STRA (Ribosomal protein S4 n=3 Tax=Phytophthora TaxID=4783 RepID=A0A0Y0BY36_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 3.210e-15
Identity = 52/126 (41.27%), Postives = 73/126 (57.94%), Query Frame = 3 
Query:  906 KKKYNKNNLFRDFFRMMYIPKPIHQKRKSRFTKYFYHRMQFRLFYGCLKTKYIKKAIMLSQKKKNKISYF---IYLMELRLDVILYRLNLTTTIREARQLVLHGKVKVNNLIIKNPSYALRLNDLL 1274
            K K  K NLF+   R     KP  +KRK  F K  + + QFR FYGC+    +K  +    KK NKI+ F   + L+E RLD+ L RL L  TI +A+QL+ H K+K+NN II  P++ L+  D++
Sbjct:   26 KLKSKKWNLFKKKLRYKKEIKP--EKRKKFFQKRLFEKQQFRNFYGCIHEYQLKNLLKKLAKKDNKINIFKKFVILLECRLDINLVRLKLAKTIFQAKQLINHNKIKINNKIINKPNFLLQKGDII 149
[Close]
BLAST of mRNA_M-pyrifera_M_contig1406.6167.1 vs. uniprot
Match: A4ZHB5_PHYSO (Ribosomal protein S4 n=17 Tax=Peronosporaceae TaxID=4777 RepID=A4ZHB5_PHYSO)

HSP 1 Score: 82.0 bits (201), Expect = 8.180e-15
Identity = 53/126 (42.06%), Postives = 72/126 (57.14%), Query Frame = 3 
Query:  906 KKKYNKNNLFRDFFRMMYIPKPIHQKRKSRFTKYFYHRMQFRLFYGCLKTKYIKKAIMLSQKKKNKISYF---IYLMELRLDVILYRLNLTTTIREARQLVLHGKVKVNNLIIKNPSYALRLNDLL 1274
            K K  K NLF+   R     KP  +KRK  F K  + + QFR FYGC+    +K       KK NKI+ F   + L+E RLD+ L RL L  TI +A+QL+ H K+KVNN II  P++ L+  D++
Sbjct:   26 KLKSKKWNLFKKKLRYRKEIKP--EKRKKFFQKRLFEKQQFRNFYGCIHEYQLKNLFKKLSKKDNKINIFKKFVILLESRLDINLVRLKLVKTIFQAKQLINHKKIKVNNKIINKPNFLLQKGDII 149
[Close]
BLAST of mRNA_M-pyrifera_M_contig1406.6167.1 vs. uniprot
Match: A0A0U2GIW9_PSECC (Ribosomal protein S4 n=1 Tax=Pseudoperonospora cubensis TaxID=143453 RepID=A0A0U2GIW9_PSECC)

HSP 1 Score: 82.0 bits (201), Expect = 8.180e-15
Identity = 51/126 (40.48%), Postives = 73/126 (57.94%), Query Frame = 3 
Query:  906 KKKYNKNNLFRDFFRMMYIPKPIHQKRKSRFTKYFYHRMQFRLFYGCLKTKYIKKAIMLSQKKKNKISYF---IYLMELRLDVILYRLNLTTTIREARQLVLHGKVKVNNLIIKNPSYALRLNDLL 1274
            K K  K NLF+   R     KP  +KRK  F K  + + QF+ FYGC+    +K       +KKNKI+ F   + L+E RLD+ L RL L  T+ +A+QL+ H K+KVNN II  P++ L+  D++
Sbjct:   26 KLKSKKWNLFKKRLRYKKEIKP--EKRKKFFQKRLFEKQQFQNFYGCIHNYQLKNIFQKLSQKKNKINIFKKFVILLESRLDINLVRLKLVKTVFQAKQLINHKKIKVNNKIINKPNFLLKKGDII 149
[Close]
BLAST of mRNA_M-pyrifera_M_contig1406.6167.1 vs. uniprot
Match: A0A2U9GJ04_9STRA (Ribosomal protein S4 n=1 Tax=Psammoneis japonica TaxID=517775 RepID=A0A2U9GJ04_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 3.620e-13
Identity = 56/168 (33.33%), Postives = 86/168 (51.19%), Query Frame = 3 
Query:  987 KSRFTKYFYHRMQFRLFYGCLKTKYIKKAIMLSQKKKNKIS------YFIYLMELRLDVILYRLNLTTTIREARQLVLHGKVKVNNLIIKNPSYALRLNDLLSFKKSSIYFLKKKIYKNIKQGNFIISSI---------PNYLEYSYKNLKFKVTYFNIMDLPKISKL 1445
            K +F+     + Q  LFYG L  KY KK++  + KKK +I       +FI ++E RLD ILYR    ++IR ARQL+LHG + VN  I+ N S  ++  DL+                N K  N II+++         P YL+ +YK L+  + +++ + L  +S L
Sbjct:   83 KRKFSNNLRIKKQINLFYGGLANKYFKKSLNTALKKKKRIRLMRNNFFFIEILEKRLDTILYRARFASSIRNARQLILHGHISVNKKIVTNKSCIMKQGDLIEI--------------NNKSHNLIINNLKFNHKWPIPPKYLQINYKTLQ--IIFYDDIKLNNLSCL 234
[Close]
BLAST of mRNA_M-pyrifera_M_contig1406.6167.1 vs. uniprot
Match: A0A0K2SSB9_PYTIN (Ribosomal protein S4 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A0K2SSB9_PYTIN)

HSP 1 Score: 75.1 bits (183), Expect = 2.230e-12
Identity = 48/127 (37.80%), Postives = 71/127 (55.91%), Query Frame = 3 
Query:  906 KKKYNKNNLFRDFFRMMYIPKPIHQKRKSRFTKYFYHRMQFRLFYGCLKTKYIKKAIMLSQKKKNKISYF---IYLMELRLDVILYRLNLTTTIREARQLVLHGKVKVNNLIIKNPSYALRLNDLLS 1277
            K K    NLF+   R+ Y  +   +KR   F K  + + QF+ FYGC+    +K       K+KNKI+ F   +  +E RLD+ + RL L  TI +A+QL+ H K+KVNN I+  P+  L+  DL+S
Sbjct:   26 KLKKKNWNLFKK--RLKYKKEIKPEKRNKFFQKRLFEKQQFKNFYGCIPEYQLKNLFKKLSKRKNKINIFKNFVITLESRLDINVLRLKLAKTIFQAKQLINHKKIKVNNKIVSKPNLLLKKGDLIS 150
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1406.6167.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1D8D7E6_9EUKA1.080e-17093.28Uncharacterized protein n=1 Tax=Paramoeba pemaquid... [more]
A0A1D8DA78_9EUKA6.770e-15796.69Ribosomal protein small subunit 4 n=1 Tax=Paramoeb... [more]
A0A5P8HBE7_9EUKA8.100e-12674.69Ribosomal protein S4 n=1 Tax=Paramoeba aparasomata... [more]
A0A5P8HBC0_9EUKA3.650e-11768.11Uncharacterized protein n=1 Tax=Paramoeba aparasom... [more]
S8D0T5_9LAMI8.230e-1953.33S4 domain-containing protein (Fragment) n=1 Tax=Ge... [more]
A0A0Y0BY36_9STRA3.210e-1541.27Ribosomal protein S4 n=3 Tax=Phytophthora TaxID=47... [more]
A4ZHB5_PHYSO8.180e-1542.06Ribosomal protein S4 n=17 Tax=Peronosporaceae TaxI... [more]
A0A0U2GIW9_PSECC8.180e-1540.48Ribosomal protein S4 n=1 Tax=Pseudoperonospora cub... [more]
A0A2U9GJ04_9STRA3.620e-1333.33Ribosomal protein S4 n=1 Tax=Psammoneis japonica T... [more]
A0A0K2SSB9_PYTIN2.230e-1237.80Ribosomal protein S4 n=1 Tax=Pythium insidiosum Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig1406contigM-pyrifera_M_contig1406:25245..26728 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score71.2
Seed ortholog evalue5.3e-10
Seed eggNOG ortholog1313265.JNIE01000002_gene728
Preferred namerpsD
KEGG koko:K02986
KEGG Pathwayko03010,map03010
KEGG ModuleM00178,M00179
Hectar predicted targeting categoryother localisation
GOsGO:0000028,GO:0000900,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006355,GO:0006412,GO:0006417,GO:0006446,GO:0006450,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0015935,GO:0016043,GO:0017148,GO:0019219,GO:0019222,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030371,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031554,GO:0031564,GO:0032268,GO:0032269,GO:0032270,GO:0032991,GO:0034248,GO:0034249,GO:0034250,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043244,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045182,GO:0045727,GO:0045903,GO:0045947,GO:0048027,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051172,GO:0051173,GO:0051246,GO:0051247,GO:0051248,GO:0051252,GO:0060255,GO:0065003,GO:0065007,GO:0065008,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0090079,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903506,GO:1990145,GO:1990904,GO:2000112,GO:2000113,GO:2001141
EggNOG free text desc.One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
EggNOG OGs2G402@200783,COG0522@1,COG0522@2
COG Functional cat.J
Best tax levelAquificae
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko03011
Exons1
Model size1484
Cds size534
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815834.7451494-UTR-M-pyrifera_M_contig1406:25244..261941622815834.7451494-UTR-M-pyrifera_M_contig1406:25244..26194Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig1406 25245..26194 +
1692277596.7815816-UTR-M-pyrifera_M_contig1406:25244..261941692277596.7815816-UTR-M-pyrifera_M_contig1406:25244..26194Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig1406 25245..26194 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815834.7576551-CDS-M-pyrifera_M_contig1406:26194..267281622815834.7576551-CDS-M-pyrifera_M_contig1406:26194..26728Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1406 26195..26728 +
1692277596.7972264-CDS-M-pyrifera_M_contig1406:26194..267281692277596.7972264-CDS-M-pyrifera_M_contig1406:26194..26728Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1406 26195..26728 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig1406.6167.1prot_M-pyrifera_M_contig1406.6167.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig1406 26195..26728 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig1406.6167.1

>prot_M-pyrifera_M_contig1406.6167.1 ID=prot_M-pyrifera_M_contig1406.6167.1|Name=mRNA_M-pyrifera_M_contig1406.6167.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=178bp
MMYIPKPIHQKRKSRFTKYFYHRMQFRLFYGCLKTKYIKKAIMLSQKKKN
KISYFIYLMELRLDVILYRLNLTTTIREARQLVLHGKVKVNNLIIKNPSY
ALRLNDLLSFKKSSIYFLKKKIYKNIKQGNFIISSIPNYLEYSYKNLKFK
VTYFNIMDLPKISKLNRNAYSHLIGLN*
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mRNA from alignment at M-pyrifera_M_contig1406:25245..26728+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig1406.6167.1 ID=mRNA_M-pyrifera_M_contig1406.6167.1|Name=mRNA_M-pyrifera_M_contig1406.6167.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1484bp|location=Sequence derived from alignment at M-pyrifera_M_contig1406:25245..26728+ (Macrocystis pyrifera P11B4 male)
ATGGGACCTAGTATAAATTTAGATCAATTAATTAAAAAAAAGTTTTTATT
TAATAAAGTTCAATATAGTTCTAGGTTTGGTTGTCATAATAATTATTATA
GTAATTTAATAAATAAAAAATTTATGATAGTTAATTTAAATTATTTAATT
ATTAGTTTAAAAAAAATGATGTTTATTACTTATAAAACTTCATTATTTCG
TGGTATTTTTTTAACTTATATTTCAAAATCTTGTATAACAGAATTTGAGA
AAATATTTTATAATATAGACGATTGACAACCTGTACAAGATGTTGGTTAC
GGATATTTAAAAAAACGAGAATTAGTAGATGATGAAAATATTAATATTTT
AGAAGTTGCTAAAGGTTGATTTAAGTACCAAGAATATTTTTCAGTTACTC
ATGATTCTAAACCTAATTTTTATGTTGTATTAACTAATGGTTTGTTTGGT
TTTATTTCTAATTTTAAAAAAGTTTTTTTAAAACATGTGAGACGTTTAAA
AGTTGAAAAATGACCAACAGATTATGCTAGATTAACATTACCTTCTATAG
TTTTTATTACAAAAACTTGTTATAATGAATACTATGAACTTTTTAGAGTC
TTTTTAAAAAAACGAATTATTTGTATAAGAACTTTTTCTTTAGTTGAGGA
GGTTAATATTAATTTAGGTTATTGTTTAAGTGTAAATGATTGTTCAAAAA
TTTATGATATATGTGAAAATATATTTTATTTAAATAGTATATATAGAAAA
AACAAATGGTAACGAAAGCTTTTTATAAAATTTCAAAATTAACAAAATTA
GTAAAATTAAATAAAAGTGATATAACAGGTTCGTTAATTAGTAAACGTCG
ACGTGGTTGAGAAATAATTTGAATTCTTTATTATCAATCTTTACATAGAC
GTGATAAAAAAAAATATAATAAGAATAATCTTTTTAGAGATTTTTTCAGA
ATGATGTATATACCTAAACCTATACATCAAAAAAGAAAATCAAGATTTAC
AAAATATTTTTATCATAGAATGCAGTTTAGGTTGTTTTATGGTTGTTTAA
AAACAAAATATATTAAAAAGGCTATAATGTTAAGTCAAAAAAAAAAAAAT
AAAATATCTTATTTTATATATTTAATGGAATTACGTTTAGATGTAATATT
ATATAGATTAAATTTAACAACAACTATTAGAGAAGCTAGACAATTAGTAC
TTCATGGTAAAGTTAAGGTTAATAATTTAATTATAAAAAATCCATCTTAT
GCTTTAAGGTTAAATGATCTTTTAAGTTTTAAAAAATCTTCTATATATTT
TTTAAAAAAGAAAATTTATAAAAACATTAAGCAGGGTAATTTTATTATAT
CTAGTATTCCTAATTATTTAGAATATTCTTATAAGAATTTAAAGTTTAAA
GTGACTTATTTTAATATTATGGATTTACCAAAAATTTCTAAATTAAATAG
AAACGCTTATTCTCATTTAATAGGTTTAAATTAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig1406:25245..26728+

>mRNA_M-pyrifera_M_contig1406.6167.1 ID=mRNA_M-pyrifera_M_contig1406.6167.1|Name=mRNA_M-pyrifera_M_contig1406.6167.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1068bp|location=Sequence derived from alignment at M-pyrifera_M_contig1406:25245..26728+ (Macrocystis pyrifera P11B4 male)
ATGATGTATATACCTAAACCTATACATCAAAAAAGAAAATCAAGATTTAC
AAAATATTTTTATCATAGAATGCAGTTTAGGTTGTTTTATGGTTGTTTAA
AAACAAAATATATTAAAAAGGCTATAATGTTAAGTCAAAAAAAAAAAAAT
AAAATATCTTATTTTATATATTTAATGGAATTACGTTTAGATGTAATATT
ATATAGATTAAATTTAACAACAACTATTAGAGAAGCTAGACAATTAGTAC
TTCATGGTAAAGTTAAGGTTAATAATTTAATTATAAAAAATCCATCTTAT
GCTTTAAGGTTAAATGATCTTTTAAGTTTTAAAAAATCTTCTATATATTT
TTTAAAAAAGAAAATTTATAAAAACATTAAGCAGGGTAATTTTATTATAT
CTAGTATTCCTAATTATTTAGAATATTCTTATAAGAATTTAAAGTTTAAA
GTGACTTATTTTAATATTATGGATTTACCAAAAATTTCTAAATTAAATAG
AAACGCTTATTCTCATTTAATAGGTTTAAATTAAATGATGTATATACCTA
AACCTATACATCAAAAAAGAAAATCAAGATTTACAAAATATTTTTATCAT
AGAATGCAGTTTAGGTTGTTTTATGGTTGTTTAAAAACAAAATATATTAA
AAAGGCTATAATGTTAAGTCAAAAAAAAAAAAATAAAATATCTTATTTTA
TATATTTAATGGAATTACGTTTAGATGTAATATTATATAGATTAAATTTA
ACAACAACTATTAGAGAAGCTAGACAATTAGTACTTCATGGTAAAGTTAA
GGTTAATAATTTAATTATAAAAAATCCATCTTATGCTTTAAGGTTAAATG
ATCTTTTAAGTTTTAAAAAATCTTCTATATATTTTTTAAAAAAGAAAATT
TATAAAAACATTAAGCAGGGTAATTTTATTATATCTAGTATTCCTAATTA
TTTAGAATATTCTTATAAGAATTTAAAGTTTAAAGTGACTTATTTTAATA
TTATGGATTTACCAAAAATTTCTAAATTAAATAGAAACGCTTATTCTCAT
TTAATAGGTTTAAATTAA
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