mRNA_M-pyrifera_M_contig1406.6166.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig1406.6166.1
Unique NamemRNA_M-pyrifera_M_contig1406.6166.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig1406.6166.1 vs. uniprot
Match: A0A1D8D5X8_9EUKA (NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Paramoeba pemaquidensis TaxID=180228 RepID=A0A1D8D5X8_9EUKA)

HSP 1 Score: 856 bits (2211), Expect = 1.510e-311
Identity = 476/493 (96.55%), Postives = 487/493 (98.78%), Query Frame = 1
Query:    1 MLENLILLPFLSFVCISLIPKNKINLIKQVSLSLSLIIFFYSLIILDSIHFNLLDYKYYINMDXXXXXXXXXXXXXXXXXXIVLMTILVPMCILTNWESVKYRFKDFTLLLFLLEFLIINLFLSLDIVFFYIFFEAVLIPMFLMIGI*GSRQRKIHAVYQFFFYTFFGSIFMLLALIIIYLHVGSTYINYVKFVEFSDNRQLLLWLCFFVAFAIKVPMIPFHI*LPEAHVEAPTSGSILLAGILLKLGTYGFLRFLIPLFPYGYYYFKPLVFLLCIISIIYGSFATIRQIDLKKIIAYSSVVHMNFTIIGLFTDSLIGLQGGFFSMISHGIISGSLFFCIGLLYDRYHSRLLYYYGGLVQFMPIFASIFFIFILSNMGFPGTSGFVGEILIIVSVFNINTKIGLLICFSMVFASIYSIWLFNRIIFGELKNYNFLINNKLFFKK*FFKFSDINKREFFILLPMVLLNFLLGLYPNLIFNLVELNLLNILYDVI 1479
            MLENLILLPFLSF+CISLIPKNKINLIKQVSLSLSLIIFF SLIILDSIHFNLLDYKYYIN++XXXXXXXXXXXXXXXXX IVLMTIL+PMCILTNWESVKYRFKDFTLLLFLLEFLIINLFLSLDIVFFYIFFE+VLIPMFLMIGI GSRQRKIHAVYQFFFYTFFGSIFMLLALIIIYLHVGSTYINY+KFV FSDNRQLLLW+CFF+AFAIKVPMIPFHI LPEAHVEAPTSGSILLAGILLKLGTYGFLRFLIPLFPYGYYYFKPLVFLLCIISIIYGSFATIRQ+DLKKIIAYSSVVHMNFTIIGLFTDSLIGLQGGFFSMISHGIISGSLFFCIGLLYDRYHSRLLYYYGGLVQFMPIFASIFFIFILSNMGFPGTSGFVGEILIIVSVFNIN+KIGLLICFSMVFASIYSIWLFNRIIFGELKNYNFLINNKLFFKK FFKFSDINKREFFILLPMV+LNFLLGLYPNLIFNLVELNLLNILYDVI
Sbjct:    1 MLENLILLPFLSFICISLIPKNKINLIKQVSLSLSLIIFFLSLIILDSIHFNLLDYKYYININXXXXXXXXXXXXXXXXXLIVLMTILIPMCILTNWESVKYRFKDFTLLLFLLEFLIINLFLSLDIVFFYIFFESVLIPMFLMIGIWGSRQRKIHAVYQFFFYTFFGSIFMLLALIIIYLHVGSTYINYIKFVGFSDNRQLLLWICFFIAFAIKVPMIPFHIWLPEAHVEAPTSGSILLAGILLKLGTYGFLRFLIPLFPYGYYYFKPLVFLLCIISIIYGSFATIRQVDLKKIIAYSSVVHMNFTIIGLFTDSLIGLQGGFFSMISHGIISGSLFFCIGLLYDRYHSRLLYYYGGLVQFMPIFASIFFIFILSNMGFPGTSGFVGEILIIVSVFNINSKIGLLICFSMVFASIYSIWLFNRIIFGELKNYNFLINNKLFFKKWFFKFSDINKREFFILLPMVVLNFLLGLYPNLIFNLVELNLLNILYDVI 493          
BLAST of mRNA_M-pyrifera_M_contig1406.6166.1 vs. uniprot
Match: A0A5P8HBG9_9EUKA (NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Paramoeba aparasomata TaxID=2583407 RepID=A0A5P8HBG9_9EUKA)

HSP 1 Score: 781 bits (2018), Expect = 3.840e-282
Identity = 429/493 (87.02%), Postives = 469/493 (95.13%), Query Frame = 1
Query:    1 MLENLILLPFLSFVCISLIPKNKINLIKQVSLSLSLIIFFYSLIILDSIHFNLLDYKYYINMDXXXXXXXXXXXXXXXXXXIVLMTILVPMCILTNWESVKYRFKDFTLLLFLLEFLIINLFLSLDIVFFYIFFEAVLIPMFLMIGI*GSRQRKIHAVYQFFFYTFFGSIFMLLALIIIYLHVGSTYINYVKFVEFSDNRQLLLWLCFFVAFAIKVPMIPFHI*LPEAHVEAPTSGSILLAGILLKLGTYGFLRFLIPLFPYGYYYFKPLVFLLCIISIIYGSFATIRQIDLKKIIAYSSVVHMNFTIIGLFTDSLIGLQGGFFSMISHGIISGSLFFCIGLLYDRYHSRLLYYYGGLVQFMPIFASIFFIFILSNMGFPGTSGFVGEILIIVSVFNINTKIGLLICFSMVFASIYSIWLFNRIIFGELKNYNFLINNKLFFKK*FFKFSDINKREFFILLPMVLLNFLLGLYPNLIFNLVELNLLNILYDVI 1479
            MLE LILLP + FV IS IPK+KINLIK++SLS SLIIFFYS++ILDS+ FN+ DYKYYI++ XXXXXXXXXXXXXXXXX IVLMT+L+P+CILTNWESV+YRFKDFTL+LFLLEFLIINLF+SLDIVFFY FFEAVLIPMFLMIGI GSRQRKIHAVYQFFFYTFFGSIFMLLALI+IYLHVGSTYINY+KF+EFS+NRQ+LLWLCFF+AFAIKVPMIPFHI LPEAHVEAPTSGSILLAGILLKLGTYGFLRFLIPLFPYGYYYFKPL+F+LCIISII GSF+TIRQIDLKKIIAYSSVVHMNFTI+GLFTDSLIGLQG FFSMISHG+ISGSLFFCIGLLYDRYH+RLLYYYGGL QFMPIF+SIFFIFILSNMGFPGTSGF+GEILI+VSVFNIN+KIG++ICFSMVFASIYSIWLFNRIIFGELKNYNFLI+ KLFFKK FFKFSD+ KRE FIL+PMV LN LLG+YPNLIFNLVE NLL+IL DV+
Sbjct:    1 MLEILILLPLIFFVIISFIPKSKINLIKKLSLSFSLIIFFYSILILDSLQFNIYDYKYYIDIXXXXXXXXXXXXXXXXXXLIVLMTLLIPVCILTNWESVRYRFKDFTLILFLLEFLIINLFVSLDIVFFYFFFEAVLIPMFLMIGIWGSRQRKIHAVYQFFFYTFFGSIFMLLALILIYLHVGSTYINYIKFIEFSNNRQILLWLCFFIAFAIKVPMIPFHIWLPEAHVEAPTSGSILLAGILLKLGTYGFLRFLIPLFPYGYYYFKPLIFVLCIISIILGSFSTIRQIDLKKIIAYSSVVHMNFTILGLFTDSLIGLQGSFFSMISHGVISGSLFFCIGLLYDRYHTRLLYYYGGLGQFMPIFSSIFFIFILSNMGFPGTSGFIGEILILVSVFNINSKIGVVICFSMVFASIYSIWLFNRIIFGELKNYNFLIHQKLFFKKWFFKFSDVTKRETFILVPMVFLNLLLGIYPNLIFNLVEPNLLSILLDVL 493          
BLAST of mRNA_M-pyrifera_M_contig1406.6166.1 vs. uniprot
Match: A0A411K7I6_9EUKA (NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Paravannella minima TaxID=1443144 RepID=A0A411K7I6_9EUKA)

HSP 1 Score: 440 bits (1132), Expect = 1.700e-146
Identity = 223/408 (54.66%), Postives = 297/408 (72.79%), Query Frame = 1
Query:  244 IVLMTILVPMCILTNWESVKYRFKDFTLLLFLLEFLIINLFLSLDIVFFYIFFEAVLIPMFLMIGI*GSRQRKIHAVYQFFFYTFFGSIFMLLALIIIYLHVGSTYINYVKFVEFSDNRQLLLWLCFFVAFAIKVPMIPFHI*LPEAHVEAPTSGSILLAGILLKLGTYGFLRFLIPLFPYGYYYFKPLVFLLCIISIIYGSFATIRQIDLKKIIAYSSVVHMNFTIIGLFTDSLIGLQGGFFSMISHGIISGSLFFCIGLLYDRYHSRLLYYYGGLVQFMPIFASIFFIFILSNMGFPGTSGFVGEILIIVSVFNINTKIGLLICFSMVFASIYSIWLFNRIIFGELKNYNFLINNKLFFKK*FFKFSDINKREFFILLPMVLLNFLLGLYPNLIFNLVELNLLNIL 1467
            ++L T LVP+CIL++W+SV ++ K++  LL ++EF ++N+F  LD+ FFY+FFE++LIPMFL+IGI GSR+RKIHA YQFF YT  GS+ MLL ++++  HVG+T I  +    F+++RQ++LWLCFFV+FA+KVPM P HI LPEAHVEAPT+GS+LLAG+LLKLGTYG  RFLIP+F YG YYF P V+ L II + YG F TIRQIDLKKI+AYSSVVHMNF ++GLFT +L  L G  F M+SHG++SG LF C+G+LYDRYH+RLL YY GL  FMP FA  F +  L+N+GFPGTS F+GE L+I+ V   N    + I  SMV  ++Y IWL+NR++FG    Y F           F++F D+ KRE F+  P++ L    GLY N  F +  ++L N++
Sbjct:  174 VILTTFLVPLCILSSWKSVYFKVKEYFFLLLIIEFFLLNIFCVLDLFFFYVFFESILIPMFLLIGIWGSRERKIHAAYQFFIYTLLGSVLMLLGILLVAFHVGTTDIQIILNSTFTESRQIVLWLCFFVSFAVKVPMFPVHIWLPEAHVEAPTAGSVLLAGVLLKLGTYGIFRFLIPVFSYGTYYFLPFVYTLSIIGLFYGCFTTIRQIDLKKIVAYSSVVHMNFALVGLFTFNLQSLGGSLFLMLSHGLVSGGLFLCVGILYDRYHTRLLKYYSGLALFMPNFALFFLVLTLANIGFPGTSSFLGEFLLIIGVMQFNFLSSVFISTSMVLGAVYGIWLYNRVMFGYT-TYKF-----------FYRFKDLTKREIFLFFPLISLVITSGLYSNSYFGVFNMSLFNLI 569          
BLAST of mRNA_M-pyrifera_M_contig1406.6166.1 vs. uniprot
Match: M4QMB1_SECEC (NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Seculamonas ecuadoriensis TaxID=221724 RepID=M4QMB1_SECEC)

HSP 1 Score: 427 bits (1098), Expect = 1.430e-142
Identity = 235/481 (48.86%), Postives = 327/481 (67.98%), Query Frame = 1
Query:    1 MLENLILLPFLSFVCISLIPKNKINLIKQVSLSLSLIIFFYSL---IILDSIHFNLLDYKYYINMDXXXXXXXXXXXXXXXXXXIVLMTILVPMCILTNWESVKYRFKDFTLLLFLLEFLIINLFLSLDIVFFYIFFEAVLIPMFLMIGI*GSRQRKIHAVYQFFFYTFFGSIFMLLALIIIYLHVGSTYINYVKFV--EFSDNRQLLLWLCFFVAFAIKVPMIPFHI*LPEAHVEAPTSGSILLAGILLKLGTYGFLRFLIPLFPYGYYYFKPLVFLLCIISIIYGSFATIRQIDLKKIIAYSSVVHMNFTIIGLFTDSLIGLQGGFFSMISHGIISGSLFFCIGLLYDRYHSRLLYYYGGLVQFMPIFASIFFIFILSNMGFPGTSGFVGEILIIVSVFNINTKIGLLICFSMVFASIYSIWLFNRIIFGELKNYNFLINNKLFFKK*FFKFSDINKREFFILLPMVLLNFLLGLYPNL 1428
            +L +LIL+P +    +  IP+ K+ +IK V+L+ SLI F  SL   I+ DS       + Y +N                    I+L T L+P+C+L +W+SVK+  K++ +   LL+ L+I +F  LD+V FY+FFE+VLIPMF++IG+ G+R+RK+ A Y  F YTFFGS+ ML+A+I IY  VG+T +  +     EFS  RQ LLWL FF +FAIK+PM+PFHI LPEAHVEAPT+GS+LLAG+LLKLG YGFLRF IP+FP    YF PLVF + +I+IIY S  T+RQIDLK+IIAYSSV HM+F  IG+F+ ++ G+QG    M+SHG++S +LF C+G++YDR+ +RL+ YY GLVQ MPIFA IF  F ++N+  P TS FVGE L++V  FN NT + +L    ++  + YS+WL+NR+ FG LK Y ++ N           FSD+N+REF+I +P++ L  L+G+YPNL
Sbjct:    6 LLISLILIPIIGIFVLFTIPEWKLTVIKSVALTTSLITFLVSLLLWILFDSSTAKF-QFVYELNWINSLNINICLGIDGISLFLILLTTFLIPICLLASWDSVKHNVKEYMISFLLLDALLITVFSVLDLVLFYVFFESVLIPMFIVIGVWGARERKVRAAYMLFLYTFFGSLLMLIAIITIYFEVGTTDLQTLISAASEFSPERQKLLWLAFFASFAIKIPMVPFHIWLPEAHVEAPTAGSVLLAGVLLKLGGYGFLRFSIPMFPDANVYFTPLVFTMSVIAIIYTSLTTLRQIDLKRIIAYSSVAHMSFVTIGIFSLNIQGIQGSILLMLSHGLVSSALFLCVGVIYDRHKTRLIKYYSGLVQLMPIFAVIFLFFTMANISLPATSSFVGEFLVLVGAFNSNTTVAVLATTGIILGAAYSLWLYNRVAFGNLK-YEYIDN-----------FSDVNRREFYIFVPLIALVLLMGIYPNL 473          
BLAST of mRNA_M-pyrifera_M_contig1406.6166.1 vs. uniprot
Match: O21286_RECAM (NADH-ubiquinone oxidoreductase chain 4 n=4 Tax=Reclinomonas americana TaxID=48483 RepID=O21286_RECAM)

HSP 1 Score: 426 bits (1096), Expect = 3.270e-142
Identity = 234/478 (48.95%), Postives = 318/478 (66.53%), Query Frame = 1
Query:    1 MLENLILLPFLSFVCISLIPKNKINLIKQVSLSLSLIIFFYSL---IILDSIHFNLLDYKYYINMDXXXXXXXXXXXXXXXXXXIVLMTILVPMCILTNWESVKYRFKDFTLLLFLLEFLIINLFLSLDIVFFYIFFEAVLIPMFLMIGI*GSRQRKIHAVYQFFFYTFFGSIFMLLALIIIYLHVGSTYINYVKFVEFSDNRQLLLWLCFFVAFAIKVPMIPFHI*LPEAHVEAPTSGSILLAGILLKLGTYGFLRFLIPLFPYGYYYFKPLVFLLCIISIIYGSFATIRQIDLKKIIAYSSVVHMNFTIIGLFTDSLIGLQGGFFSMISHGIISGSLFFCIGLLYDRYHSRLLYYYGGLVQFMPIFASIFFIFILSNMGFPGTSGFVGEILIIVSVFNINTKIGLLICFSMVFASIYSIWLFNRIIFGELKNYNFLINNKLFFKK*FFKFSDINKREFFILLPMVLLNFLLGLYPN 1425
            +L  +IL P L    + LIP  K +LIKQVSL  SL+ F  SL   I  D    +   + Y +N                    ++L T L+P+CILT WES+K+  K++ +   LL+ L+I +F  LD+V FYIFFE+VLIPMF++IG+ GSR+RK+ A Y  F YTFFGS+ ML+A+++IY   G+T I  +   EFS  RQ LLWL FF++FAIK+PM+PFH+ LPEAHVEAPT+GS+LLAG+LLKLG YG LRF IP+FP    YF PLV+ + II+IIY S  T+RQIDLK+IIAYSSV HMNF  IG+F+ ++ GL+G    M+SHGI+S +LF CIG+LYDR+ +RLL YY G+VQ MPIFA++F +F ++N+  PGTS FVGE L+++  FN NT +       ++  + YS+WL+NR+ FG LK     I    FF        D+ +RE  +  P+V+L F++G+YP 
Sbjct:   10 LLPTIILTPILGVFILFLIPGWKTSLIKQVSLYASLLTFILSLFLWIFFDK-STSKFQFVYEVNWIETLNIHFSLGIDGISLFLVILTTFLIPLCILTGWESIKHNIKEYMICFLLLDALLIMIFCVLDLVLFYIFFESVLIPMFIVIGVWGSRERKVRAAYMLFLYTFFGSLLMLIAIMVIYFDAGTTDIQVLLTTEFSQERQKLLWLAFFISFAIKIPMVPFHVWLPEAHVEAPTAGSVLLAGVLLKLGGYGILRFSIPMFPEATVYFTPLVYTMSIIAIIYTSLTTLRQIDLKRIIAYSSVAHMNFVTIGMFSLNMQGLEGSILLMLSHGIVSSALFLCIGVLYDRHKTRLLKYYSGVVQTMPIFATLFMLFTMANISLPGTSSFVGEFLVLIGAFNSNTTVAFFATTGIILGAAYSLWLYNRVAFGNLK-----IEYIQFF-------YDVTRREMLVFTPLVILVFVMGIYPE 474          
BLAST of mRNA_M-pyrifera_M_contig1406.6166.1 vs. uniprot
Match: A0A0B5GSD1_MALCL (NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Malawimonas californiana TaxID=221722 RepID=A0A0B5GSD1_MALCL)

HSP 1 Score: 424 bits (1091), Expect = 1.530e-141
Identity = 217/408 (53.19%), Postives = 303/408 (74.26%), Query Frame = 1
Query:  244 IVLMTILVPMCILTNWESVKYRFKDFTLLLFLLEFLIINLFLSLDIVFFYIFFEAVLIPMFLMIGI*GSRQRKIHAVYQFFFYTFFGSIFMLLALIIIYLHVGSTYINYVKFVEFSDNRQLLLWLCFFVAFAIKVPMIPFHI*LPEAHVEAPTSGSILLAGILLKLGTYGFLRFLIPLFPYGYYYFKPLVFLLCIISIIYGSFATIRQIDLKKIIAYSSVVHMNFTIIGLFTDSLIGLQGGFFSMISHGIISGSLFFCIGLLYDRYHSRLLYYYGGLVQFMPIFASIFFIFILSNMGFPGTSGFVGEILIIVSVFNINTKIGLLICFSMVFASIYSIWLFNRIIFGELKNYNFLINNKLFFKK*FFKFSDINKREFFILLPMVLLNFLLGLYPNLIFNLVELNLLNIL 1467
            I+L T L+P+C+L++W S+K   K++ +L  LLE LI+NLF ++D++FFYIFFE+VLIPMFL+IGI G+R+RKIHA +QFF YT  GS+ MLLA++IIY +VG+T +N +   EFS N QL+LW+ FF +FA+KVPM+P HI LPEAHVEAPT+GS++LAGILLKLGTYGFLRF + +FP   YY+ PL+F + +I+I+Y S  T+RQIDLKKIIAYSSV HMNF  IGLFT ++  ++G    M+SHG IS +LF CIG+LYDR+H+R++ YY G+   MPIF+ +F  F LSN+  PGTS F+GE LI++S F  N+ I  +    ++  + Y++WL+NR+ FG + N N+ IN           F+DIN REF I +P+V++  L+G+YPN+  + + L++ N+L
Sbjct:   89 IILTTFLIPLCLLSSWNSIKIYVKEYMILFLLLESLILNLFSAVDLIFFYIFFESVLIPMFLIIGIWGARERKIHAAFQFFLYTLLGSLLMLLAILIIYYNVGTTDLNTLLITEFSKNTQLILWIAFFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTYGFLRFSLSMFPDANYYYMPLIFSMSVIAIVYTSLTTLRQIDLKKIIAYSSVAHMNFVTIGLFTLNVEAIEGSILLMLSHGFISSALFLCIGILYDRHHTRIVKYYSGITLTMPIFSLLFLFFTLSNISLPGTSSFIGEFLILLSTFQTNSSICFIASLGIILGAGYAMWLYNRVAFGNI-NVNY-IN----------PFNDINYREFMIFIPLVIMILLMGIYPNIFLDYIHLSVYNLL 484          
BLAST of mRNA_M-pyrifera_M_contig1406.6166.1 vs. uniprot
Match: A0A650AKT5_9CHLO (NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Prasinococcus sp. CCMP1194 TaxID=110672 RepID=A0A650AKT5_9CHLO)

HSP 1 Score: 424 bits (1090), Expect = 1.780e-141
Identity = 221/474 (46.62%), Postives = 315/474 (66.46%), Query Frame = 1
Query:    4 LENLILLPFLSFVCISLIPKNKINLIKQVSLSLSLIIFFYSLIILDSIHFNLLDYKYYINMDXXXXXXXXXXXXXXXXXXIVLMTILVPMCILTNWESVKYRFKDFTLLLFLLEFLIINLFLSLDIVFFYIFFEAVLIPMFLMIGI*GSRQRKIHAVYQFFFYTFFGSIFMLLALIIIYLHVGSTYINYVKFVEFSDNRQLLLWLCFFVAFAIKVPMIPFHI*LPEAHVEAPTSGSILLAGILLKLGTYGFLRFLIPLFPYGYYYFKPLVFLLCIISIIYGSFATIRQIDLKKIIAYSSVVHMNFTIIGLFTDSLIGLQGGFFSMISHGIISGSLFFCIGLLYDRYHSRLLYYYGGLVQFMPIFASIFFIFILSNMGFPGTSGFVGEILIIVSVFNINTKIGLLICFSMVFASIYSIWLFNRIIFGELKNYNFLINNKLFFKK*FFKFSDINKREFFILLPMVLLNFLLGLYPN 1425
            L  L+ LP +  +C+SL+P +    +K V+LS S + F  SL +    H  + D++Y                       ++L T+LVP+C+LT W SV++  K++ +L  L+E +++ +F  LD++FFYIFFEAVL+PM+L+IGI GSR+R+I A Y FF YT  GS+FMLL L+ +YL  G+T ++ +     S+ RQ++LW+ FF +FA+KVPM+P HI LPEAHVEAPT+GS++LAGILLKLGTYGFLRF +PLFPY   YF P +F+L +I I+Y S  T+RQ+DLKKIIAYSSV HMNF  +GLF+ +L G++G    M+SHG +S +LF CIG+LYDRY +RLL YYGG +  MP+FA +F  F L N+  PGTS FVGE +++  V+  NT I  L    M+  + YS+WL+NR++FG +K  +             F  SD+N+REF+I  P+++    +G++P 
Sbjct:    7 LPGLLALPLVGALCVSLLPAHNGYTVKTVALSFSCLTFLLSLFLWIGFHDGIADFQYASEFSWGTLTLHFGVDGISLFF-LLLTTLLVPLCLLTGWASVQHSVKEYCILFLLMETVMLGVFCILDVLFFYIFFEAVLLPMYLIIGIWGSRERRIKAAYTFFLYTLLGSVFMLLGLLALYLEAGTTDLHILLTTPLSEKRQIILWIAFFASFAVKVPMLPVHIWLPEAHVEAPTAGSVVLAGILLKLGTYGFLRFSLPLFPYASLYFTPFIFVLSVIGILYASCTTLRQVDLKKIIAYSSVAHMNFVTLGLFSGTLQGIEGAIMLMLSHGFVSSALFLCIGVLYDRYKTRLLKYYGGCIHTMPLFAVLFLFFTLGNLSLPGTSAFVGEFMLLTGVYQTNTFICFLAALGMILGAAYSLWLYNRVVFGHMKMSHS------------FSSSDVNRREFWIFFPLIVCTLWMGVFPE 467          
BLAST of mRNA_M-pyrifera_M_contig1406.6166.1 vs. uniprot
Match: M4Q9P0_HISAR (NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Histiona aroides TaxID=392300 RepID=M4Q9P0_HISAR)

HSP 1 Score: 423 bits (1087), Expect = 6.340e-141
Identity = 224/487 (46.00%), Postives = 328/487 (67.35%), Query Frame = 1
Query:   25 PFLSFVCISLIPKNKINLIKQVSLSLSLIIFFYSLII---LDSIHFNLLDYKYYINMDXXXXXXXXXXXXXXXXXXIVLMTILVPMCILTNWESVKYRFKDFTLLLFLLEFLIINLFLSLDIVFFYIFFEAVLIPMFLMIGI*GSRQRKIHAVYQFFFYTFFGSIFMLLALIIIYLHVGSTYINYVKFVEFSDNRQLLLWLCFFVAFAIKVPMIPFHI*LPEAHVEAPTSGSILLAGILLKLGTYGFLRFLIPLFPYGYYYFKPLVFLLCIISIIYGSFATIRQIDLKKIIAYSSVVHMNFTIIGLFTDSLIGLQGGFFSMISHGIISGSLFFCIGLLYDRYHSRLLYYYGGLVQFMPIFASIFFIFILSNMGFPGTSGFVGEILIIVSVFNINTKIGLLICFSMVFASIYSIWLFNRIIFGELKNYNFLINNKLFFKK*FFKFSDINKREFFILLPMVLLNFLLGLYPNLIFNLVELNLLNILYDV 1476
            PFL    + +IP  KIN+IKQVSL  SL+ F  SL +    DS   +   + Y +N                    ++L T L+P+CIL +WESVK+  K++ +   LL+ L+I +F  LD+V FYIFFE+VLIPMF++IG+ GSR+RK+ A Y  F YTF GS+ ML A+++IY   G+T +  +   +FS+ RQL LWL FF++FAIKVPM+PFH+ LPEAHVEAPT+GS+LLAG+LLKLG YG +RF +P+FP    Y+ PLV+ + +++I+Y S  T+RQIDLK+IIAYSSV HMNF  IG+F+ ++ GL+G    M+SHGI+S +LF C+G+LYDR+ +RLL YY G+VQ MP+FA++F +F L+N+  PGTS FVGE L+++  FN NT +  +    ++  + YS+WL+NR++FG LK   F+             F D+ +RE ++  P V+L F++G+YP++  + + +++ N++  V
Sbjct:   14 PFLGIAILLVIPDWKINVIKQVSLIASLVTFLISLFLWIEFDS-STSKFQFVYEVNWINALNINFSLGIDGISLFLVLLTTFLIPLCILASWESVKHNIKEYMICFLLLDALLILIFCVLDLVLFYIFFESVLIPMFIVIGVWGSRERKVRAAYMLFLYTFLGSLLMLTAIMVIYFEAGTTDMQVLLATDFSEERQLFLWLAFFISFAIKVPMLPFHVWLPEAHVEAPTAGSVLLAGVLLKLGGYGLIRFCLPMFPDASVYYTPLVYTMSLMAIVYTSLTTLRQIDLKRIIAYSSVAHMNFVTIGIFSLNMQGLEGSMLLMLSHGIVSSALFLCVGVLYDRHKTRLLKYYSGVVQMMPLFATLFMVFTLANISMPGTSSFVGEFLVLIGAFNSNTSVAFIATTGIILGAAYSLWLYNRVVFGNLK-VEFI-----------HAFYDVTRRELYVFAPFVVLVFVMGIYPDIFLDPMHISVANLIQHV 487          
BLAST of mRNA_M-pyrifera_M_contig1406.6166.1 vs. uniprot
Match: M4QD44_9EUKA (NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Jakoba bahamiensis TaxID=221721 RepID=M4QD44_9EUKA)

HSP 1 Score: 422 bits (1086), Expect = 9.280e-141
Identity = 212/396 (53.54%), Postives = 293/396 (73.99%), Query Frame = 1
Query:  244 IVLMTILVPMCILTNWESVKYRFKDFTLLLFLLEFLIINLFLSLDIVFFYIFFEAVLIPMFLMIGI*GSRQRKIHAVYQFFFYTFFGSIFMLLALIIIYLHVGSTYINYVKFVEFSDNRQLLLWLCFFVAFAIKVPMIPFHI*LPEAHVEAPTSGSILLAGILLKLGTYGFLRFLIPLFPYGYYYFKPLVFLLCIISIIYGSFATIRQIDLKKIIAYSSVVHMNFTIIGLFTDSLIGLQGGFFSMISHGIISGSLFFCIGLLYDRYHSRLLYYYGGLVQFMPIFASIFFIFILSNMGFPGTSGFVGEILIIVSVFNINTKIGLLICFSMVFASIYSIWLFNRIIFGELK-NYNFLINNKLFFKK*FFKFSDINKREFFILLPMVLLNFLLGLYPNL 1428
            ++L T L+P+CIL +WESVK   K++ +   LL+  ++ +F  LD++ FY+FFE+VLIPMF++IG+ GSR+RK+ A Y  F YTFFGS+ ML+A++++Y   G+T +  +   EFS+ RQLLLWL FF +FAIK+PM+PFHI LPEAHVEAPT+GS+LLAG+LLKLG YG +RF IPLFPY   Y+ PLV+ + I++IIY S  T+RQIDLK+IIAYSSV HMNF  IGLF+ ++ GL+G    M+SHGI+S +LF CIG+LYDR+ +RLL YY G+VQ MPIFA++F IF ++N+  PGTS F+GE L++V VFN NT +       ++  + YS+WL+NR+ FG LK +Y  L             +SD+ +REFFI LP+V+L F++G+YP+L
Sbjct:   89 VLLTTFLIPLCILASWESVKNNIKEYMICFLLLDAFLVLIFSVLDLLLFYVFFESVLIPMFIVIGVWGSRERKVRAAYMLFLYTFFGSLLMLVAILVVYFEAGTTDLQVLLTTEFSNERQLLLWLAFFASFAIKIPMVPFHIWLPEAHVEAPTAGSVLLAGVLLKLGGYGLIRFSIPLFPYASVYYTPLVYTMSIVAIIYTSLTTLRQIDLKRIIAYSSVAHMNFVTIGLFSLNIQGLEGAMLLMLSHGIVSSALFLCIGVLYDRHKTRLLKYYSGVVQIMPIFATLFLIFTMANISLPGTSSFIGEFLVLVGVFNSNTTVAFFATTGIILGAAYSLWLYNRVAFGNLKIDYISL-------------YSDVTRREFFIFLPLVILVFVMGIYPDL 471          
BLAST of mRNA_M-pyrifera_M_contig1406.6166.1 vs. uniprot
Match: A0A1E1GHN5_9EUKA (NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A1E1GHN5_9EUKA)

HSP 1 Score: 422 bits (1085), Expect = 1.010e-140
Identity = 228/486 (46.91%), Postives = 325/486 (66.87%), Query Frame = 1
Query:    1 MLENLILLPFLSFVCISLIPKNKINLIKQVSLSLSLIIFFYSLIILDSIHFNLLDYKYYI----NMDXXXXXXXXXXXXXXXXXXIVLMTILVPMCILTNWESVKYRFKDFTLLLFLLEFLIINLFLSLDIVFFYIFFEAVLIPMFLMIGI*GSRQRKIHAVYQFFFYTFFGSIFMLLALIIIYLHVGSTYINYVKFVEFSDNRQLLLWLCFFVAFAIKVPMIPFHI*LPEAHVEAPTSGSILLAGILLKLGTYGFLRFLIPLFPYGYYYFKPLVFLLCIISIIYGSFATIRQIDLKKIIAYSSVVHMNFTIIGLFTDSLIGLQGGFFSMISHGIISGSLFFCIGLLYDRYHSRLLYYYGGLVQFMPIFASIFFIFILSNMGFPGTSGFVGEILIIVSVFNINTKIGLLICFSMVFASIYSIWLFNRIIFGELKNYNFLINNKLFFKK*FFKFSDINKREFFILLPMVLLNFLLGLYPNLIFNLVE 1446
            +L  L+ +P L  + I L+P   + LI+ V+L  SL  F +SL++   + F+   YK+      + +                  I+L T L+P+CIL++W SV+   K++ +   +LEF +I +F  LD++ FYIFFEAVL+PMF++IG+ GSR+RKI A YQFF YT  GS+ MLL +I IY   G+T +  +   +FS+ RQL+LWL FF +FA+KVPMIPFHI LPEAHVEAPT+GS++LAGILLKLG YGF+RF +PLFP+   YF PL+F + +++IIY S  T+RQIDLKKIIAYSSV HM +  IGLFT ++ G++G    M+SHG++S +LF C+G+LYDRYH+R++ YYGGL Q MP+FA IF  F  +N+  PGTS F+GE L+++  F  NT +  L    ++  + YS+WL NR+IFG+L    ++            KFSDI+KREF I +P++ L  L+G+YP++  +L+ 
Sbjct:    2 LLSLLVFIPLLGAIIILLLPNYLVKLIRLVALYSSLATFVFSLLLW--VFFDRSTYKFQFVEQYSWNEVANISFYLGIDGISLFFIILTTFLIPICILSSWSSVRVYIKEYMVSFLILEFFLILVFSVLDLLLFYIFFEAVLLPMFIIIGVFGSRERKIRAAYQFFLYTLLGSVLMLLGIIFIYFETGTTDLQVLFCTDFSEKRQLILWLAFFCSFAVKVPMIPFHIWLPEAHVEAPTAGSVILAGILLKLGGYGFIRFSLPLFPFASVYFTPLIFSVSVVAIIYTSLTTLRQIDLKKIIAYSSVAHMGYVTIGLFTLNIQGIEGAVLLMLSHGLVSSALFLCVGVLYDRYHTRIIKYYGGLTQVMPLFAFIFLFFSFANISLPGTSSFIGEFLVLLGAFKANTLVAFLATTGVILGAAYSLWLANRLIFGQL-TLQYIT-----------KFSDISKREFVIFMPLIFLVILMGVYPDMFLDLMH 473          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1406.6166.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1D8D5X8_9EUKA1.510e-31196.55NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Par... [more]
A0A5P8HBG9_9EUKA3.840e-28287.02NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Par... [more]
A0A411K7I6_9EUKA1.700e-14654.66NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Par... [more]
M4QMB1_SECEC1.430e-14248.86NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Sec... [more]
O21286_RECAM3.270e-14248.95NADH-ubiquinone oxidoreductase chain 4 n=4 Tax=Rec... [more]
A0A0B5GSD1_MALCL1.530e-14153.19NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Mal... [more]
A0A650AKT5_9CHLO1.780e-14146.62NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Pra... [more]
M4Q9P0_HISAR6.340e-14146.00NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=His... [more]
M4QD44_9EUKA9.280e-14153.54NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Jak... [more]
A0A1E1GHN5_9EUKA1.010e-14046.91NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Pal... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig1406contigM-pyrifera_M_contig1406:22245..23723 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score74.3
Seed ortholog evalue5.2e-11
Seed eggNOG ortholog82508.K1VDU2
Preferred namenad4
KEGG rclassRC00061
KEGG koko:K03881
KEGG TC3.D.1.6
KEGG ReactionR11945
KEGG Pathwayko00190,ko01100,ko04714,ko04723,ko05012,map00190,map01100,map04714,map04723,map05012
KEGG ModuleM00142
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Proton-conducting membrane transporter
EggNOG OGs39UFQ@33154,3NVNX@4751,3UXW1@5204,COG1008@1,KOG4845@2759
EC1.6.5.3
COG Functional cat.C
Best tax levelBasidiomycota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03029
Exons1
Model size1479
Cds size444
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815834.7030098-CDS-M-pyrifera_M_contig1406:22244..226881622815834.7030098-CDS-M-pyrifera_M_contig1406:22244..22688Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1406 22245..22688 +
1692277596.7462935-CDS-M-pyrifera_M_contig1406:22244..226881692277596.7462935-CDS-M-pyrifera_M_contig1406:22244..22688Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1406 22245..22688 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815834.713844-UTR-M-pyrifera_M_contig1406:22688..237231622815834.713844-UTR-M-pyrifera_M_contig1406:22688..23723Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig1406 22689..23723 +
1692277596.7612915-UTR-M-pyrifera_M_contig1406:22688..237231692277596.7612915-UTR-M-pyrifera_M_contig1406:22688..23723Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig1406 22689..23723 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig1406.6166.1prot_M-pyrifera_M_contig1406.6166.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig1406 22245..22688 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig1406.6166.1

>prot_M-pyrifera_M_contig1406.6166.1 ID=prot_M-pyrifera_M_contig1406.6166.1|Name=mRNA_M-pyrifera_M_contig1406.6166.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=148bp
MLENLILLPFLSFVCISLIPKNKINLIKQVSLSLSLIIFFYSLIILDSIH
FNLLDYKYYINMDYILNIQYIIGLDYISGFLIVLMTILVPMCILTNWESV
KYRFKDFTLLLFLLEFLIINLFLSLDIVFFYIFFEAVLIPMFLMIGI*
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mRNA from alignment at M-pyrifera_M_contig1406:22245..23723+

Legend: CDSpolypeptideUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig1406.6166.1 ID=mRNA_M-pyrifera_M_contig1406.6166.1|Name=mRNA_M-pyrifera_M_contig1406.6166.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1479bp|location=Sequence derived from alignment at M-pyrifera_M_contig1406:22245..23723+ (Macrocystis pyrifera P11B4 male)
ATGTTAGAAAATTTAATATTATTACCTTTTTTATCTTTCGTATGTATTTC ATTAATTCCTAAAAATAAAATAAACTTAATAAAACAAGTATCATTAAGTT TAAGCCTTATTATTTTTTTTTATAGTTTAATTATTTTGGATTCTATACAT TTTAATTTACTAGATTATAAATATTATATTAATATGGATTATATTTTAAA TATTCAATATATTATTGGTTTAGATTATATATCAGGATTTTTAATCGTTT TAATGACTATATTAGTTCCAATGTGTATTTTAACAAATTGGGAAAGTGTA AAATATAGATTTAAAGATTTTACATTATTATTATTTTTATTAGAATTCTT AATAATCAATTTATTTTTATCTTTAGATATAGTTTTTTTTTATATTTTTT TTGAAGCAGTATTAATTCCTATGTTTTTAATGATAGGTATTTGAGGTTCT AGACAAAGAAAAATACATGCAGTTTATCAATTTTTTTTTTATACTTTTTT TGGTTCTATCTTTATGTTATTAGCTTTAATAATCATCTATTTACATGTAG GTTCTACTTATATAAATTATGTTAAATTTGTGGAATTTTCTGATAATAGA CAACTATTATTATGGTTATGTTTTTTTGTAGCTTTTGCTATAAAAGTACC TATGATTCCTTTTCATATTTGATTACCAGAGGCTCATGTTGAAGCACCTA CATCTGGTTCTATACTTTTAGCAGGTATTTTATTAAAGTTAGGTACTTAT GGTTTTTTAAGATTTTTAATACCGCTATTTCCTTATGGGTATTATTATTT TAAACCTTTAGTATTTTTATTATGTATAATTAGTATTATATATGGATCTT TTGCTACAATTAGACAAATAGATTTAAAGAAAATAATTGCCTATTCTTCT GTTGTTCATATGAATTTTACTATAATAGGGTTGTTTACAGATTCTCTTAT AGGTTTACAAGGGGGTTTTTTTTCTATGATTAGTCATGGTATTATATCTG GGTCTCTATTTTTTTGTATAGGTTTATTATACGATAGATATCATAGTAGA TTGTTATATTATTATGGAGGTTTAGTCCAATTTATGCCTATATTTGCTTC TATTTTTTTCATTTTCATTTTAAGTAATATGGGATTTCCCGGTACTAGTG GTTTTGTAGGTGAAATTTTAATTATAGTATCTGTTTTTAATATAAATACT AAAATTGGTTTATTAATTTGTTTTAGTATGGTTTTTGCTTCTATATATTC TATTTGGTTATTTAATCGTATTATTTTTGGGGAATTAAAAAATTACAATT TTTTAATTAATAATAAATTATTTTTTAAAAAATGATTTTTTAAATTTTCC GATATCAATAAACGTGAGTTTTTTATTTTATTACCTATGGTTTTATTAAA TTTTTTATTAGGGTTATATCCAAATTTAATATTTAATTTAGTAGAATTAA ATCTTTTAAACATATTATACGATGTTATT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig1406:22245..23723+

>mRNA_M-pyrifera_M_contig1406.6166.1 ID=mRNA_M-pyrifera_M_contig1406.6166.1|Name=mRNA_M-pyrifera_M_contig1406.6166.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=888bp|location=Sequence derived from alignment at M-pyrifera_M_contig1406:22245..23723+ (Macrocystis pyrifera P11B4 male)
ATGTTAGAAAATTTAATATTATTACCTTTTTTATCTTTCGTATGTATTTC
ATTAATTCCTAAAAATAAAATAAACTTAATAAAACAAGTATCATTAAGTT
TAAGCCTTATTATTTTTTTTTATAGTTTAATTATTTTGGATTCTATACAT
TTTAATTTACTAGATTATAAATATTATATTAATATGGATTATATTTTAAA
TATTCAATATATTATTGGTTTAGATTATATATCAGGATTTTTAATCGTTT
TAATGACTATATTAGTTCCAATGTGTATTTTAACAAATTGGGAAAGTGTA
AAATATAGATTTAAAGATTTTACATTATTATTATTTTTATTAGAATTCTT
AATAATCAATTTATTTTTATCTTTAGATATAGTTTTTTTTTATATTTTTT
TTGAAGCAGTATTAATTCCTATGTTTTTAATGATAGGTATTTGAATGTTA
GAAAATTTAATATTATTACCTTTTTTATCTTTCGTATGTATTTCATTAAT
TCCTAAAAATAAAATAAACTTAATAAAACAAGTATCATTAAGTTTAAGCC
TTATTATTTTTTTTTATAGTTTAATTATTTTGGATTCTATACATTTTAAT
TTACTAGATTATAAATATTATATTAATATGGATTATATTTTAAATATTCA
ATATATTATTGGTTTAGATTATATATCAGGATTTTTAATCGTTTTAATGA
CTATATTAGTTCCAATGTGTATTTTAACAAATTGGGAAAGTGTAAAATAT
AGATTTAAAGATTTTACATTATTATTATTTTTATTAGAATTCTTAATAAT
CAATTTATTTTTATCTTTAGATATAGTTTTTTTTTATATTTTTTTTGAAG
CAGTATTAATTCCTATGTTTTTAATGATAGGTATTTGA
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