mRNA_M-pyrifera_M_contig1406.6160.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig1406.6160.1
Unique NamemRNA_M-pyrifera_M_contig1406.6160.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig1406.6160.1 vs. uniprot
Match: A0A1D8D5X3_9EUKA (Cytochrome b n=2 Tax=Paramoeba pemaquidensis TaxID=180228 RepID=A0A1D8D5X3_9EUKA)

HSP 1 Score: 701 bits (1809), Expect = 4.680e-254
Identity = 358/381 (93.96%), Postives = 369/381 (96.85%), Query Frame = 1
Query:    1 MRKIKIVPLINTIYKTAIIYPVSGNITFS*NLGVSAGIMLASQIVTGLFLAMHYIPEAEMAFDSVRHIVVDVNNGLIIRSLHANGSSLFFFVTYLHLFRGLYYGSYAAPRRHV*LSGVVILLLMIVTAFLGYVLP*GQMSY*AATVITNIIAIVPIVGKDSLLVVWGNYSVSNATLQRFFALHFLLPFVILFAVGGHIIALHEHGSSNPSIGIRHFDNLTFHPFFIFKDIFTTMILLYAYNYYAMEHAPEIIDPDNYVKANPLSTPAHIVPE*YFKMFYAILRSVPNKEFGAFLLLSSILVLFIFPYITKSGLKDSSQRFYHQFYF*LFFSDF*LLT*LGGKPIDEPFVSLGQACTGYYFLYFLVILP*IAKRERRFLRLS 1143
            MRKIKI+PL+NTIYKTAIIYPVSGNITFS NLGVSAGIML SQIVTGLFLAMHYIPE+EMAFDSVRHIVVDVNNGLIIRSLHANGSSLFFF+TYLHLFRGLYYGSYA+PRRHV LSGVVILLLMIVTAFLGYVLP GQMSY AATVITNIIAIVPIVGKDSL+VVWGNYSVSNATLQRFFALHFLLPFVILFAVGGHIIALHE+GSSNPSIG+RHFDNLTFHPFFIFKDIFTTMILLY YNYYAMEH+PEIIDPDNYVKANPLSTPAHIVPE YFKMFYAILRSVPNKEFGAFLLLSSILVLFIFPYITKSGLKDSSQRFYHQ YF LFFSDF LLT LGGKPIDEPFVSLGQACTGYYF+YFL+ILP IAKRERRFLRLS
Sbjct:    1 MRKIKIIPLLNTIYKTAIIYPVSGNITFSWNLGVSAGIMLVSQIVTGLFLAMHYIPESEMAFDSVRHIVVDVNNGLIIRSLHANGSSLFFFITYLHLFRGLYYGSYASPRRHVWLSGVVILLLMIVTAFLGYVLPWGQMSYWAATVITNIIAIVPIVGKDSLMVVWGNYSVSNATLQRFFALHFLLPFVILFAVGGHIIALHENGSSNPSIGVRHFDNLTFHPFFIFKDIFTTMILLYTYNYYAMEHSPEIIDPDNYVKANPLSTPAHIVPEWYFKMFYAILRSVPNKEFGAFLLLSSILVLFIFPYITKSGLKDSSQRFYHQLYFWLFFSDFWLLTWLGGKPIDEPFVSLGQACTGYYFIYFLIILPWIAKRERRFLRLS 381          
BLAST of mRNA_M-pyrifera_M_contig1406.6160.1 vs. uniprot
Match: A0A5P8HC12_9EUKA (Cytochrome b n=1 Tax=Paramoeba aparasomata TaxID=2583407 RepID=A0A5P8HC12_9EUKA)

HSP 1 Score: 646 bits (1667), Expect = 1.940e-232
Identity = 323/381 (84.78%), Postives = 356/381 (93.44%), Query Frame = 1
Query:    1 MRKIKIVPLINTIYKTAIIYPVSGNITFS*NLGVSAGIMLASQIVTGLFLAMHYIPEAEMAFDSVRHIVVDVNNGLIIRSLHANGSSLFFFVTYLHLFRGLYYGSYAAPRRHV*LSGVVILLLMIVTAFLGYVLP*GQMSY*AATVITNIIAIVPIVGKDSLLVVWGNYSVSNATLQRFFALHFLLPFVILFAVGGHIIALHEHGSSNPSIGIRHFDNLTFHPFFIFKDIFTTMILLYAYNYYAMEHAPEIIDPDNYVKANPLSTPAHIVPE*YFKMFYAILRSVPNKEFGAFLLLSSILVLFIFPYITKSGLKDSSQRFYHQFYF*LFFSDF*LLT*LGGKPIDEPFVSLGQACTGYYFLYFLVILP*IAKRERRFLRLS 1143
            M+KIK +PL +T+YKT+IIYPVS NITFS NLGVS+GIML SQI+TGLFLAMHYIPEA+MAFDSVRHIVVDVNNG I+RSLHANGSSLFFF+TYLHLFRGLYYGSY +PRR+V LSGVVILLLMIVTAFLGYVLP GQMSY AATVITNIIAI+PI+GKDSL+VVWGNYSVSNATLQRFFALHFLLPF+ILF VG H+IALHE+GSSNP IG+R+FDNL+FHPFFIFKDIFTTM+LL+++NYYAM ++P IIDPDNY+KANPLSTP HIVPE YFKMFYAILRSVPNKEFGAFLLL SILVLF+FP+ITKSGLKDSSQRFYHQ YF LFFSDF LLT LGGKPIDEPFVSLGQ CTGYYF+YFL+ILP IA RER+FLRLS
Sbjct:    1 MKKIKFLPLFSTVYKTSIIYPVSSNITFSWNLGVSSGIMLFSQILTGLFLAMHYIPEADMAFDSVRHIVVDVNNGFIVRSLHANGSSLFFFITYLHLFRGLYYGSYNSPRRYVWLSGVVILLLMIVTAFLGYVLPWGQMSYWAATVITNIIAIIPIIGKDSLMVVWGNYSVSNATLQRFFALHFLLPFIILFVVGVHVIALHENGSSNPVIGVRNFDNLSFHPFFIFKDIFTTMVLLFSFNYYAMTYSPTIIDPDNYIKANPLSTPPHIVPEWYFKMFYAILRSVPNKEFGAFLLLCSILVLFLFPFITKSGLKDSSQRFYHQLYFWLFFSDFWLLTWLGGKPIDEPFVSLGQVCTGYYFIYFLIILPWIAYRERKFLRLS 381          
BLAST of mRNA_M-pyrifera_M_contig1406.6160.1 vs. uniprot
Match: A0A2U9DQS7_9EUKA (Cytochrome b n=1 Tax=Clydonella sawyeri TaxID=2201168 RepID=A0A2U9DQS7_9EUKA)

HSP 1 Score: 368 bits (944), Expect = 1.570e-122
Identity = 196/377 (51.99%), Postives = 258/377 (68.44%), Query Frame = 1
Query:    1 MRKIKIVPLINTIYKTAIIYPVSGNITFS*NLGVSAGIMLASQIVTGLFLAMHYIPEAEMAFDSVRHIVVDVNNGLIIRSLHANGSSLFFFVTYLHLFRGLYYGSYAAPRRHV*LSGVVILLLMIVTAFLGYVLP*GQMSY*AATVITNIIAIVPIVGKDSLLVVWGNYSVSNATLQRFFALHFLLPFVILFAVGGHIIALHEHGSSNP-SIGIRHFDNLTFHPFFIFKDIFTTMILLYAYNYYAMEHAPEIIDPDNYVKANPLSTPAHIVPE*YFKMFYAILRSVPNKEFGAFLLLSSILVLFIFPYITKSGLKDSSQRFYHQFYF*LFFSDF*LLT*LGGKPIDEPFVSLGQACTGYYFLYFLVILP*IAKRERR 1128
            MR IK  PLI+ ++ + + YPV  +I++  N G  A   L  Q+VTG+FLAMHY    E+AF SV HI+ DVN G  IR +HANG+S+FF V Y+H+FRGLYYGSY  PR+ V   GV+ILL+MI TAF+GYVLP GQMS+ AATVITN+ + +P+VG D +  +WG +SV NATL RFF+ H+ LPF+++  V  HII LHE GS+NP    I + D   F P+F  KDIF  ++ L  ++Y        +  PDNY+ ANPL TPAHIVPE YF  FYAILRS+PNK  G  LLLS+ILVL I P+I KS ++ S  R +  F+F +F  +  LL  LGG+P++ P++ LGQ CT +YF+YFL ILP +++ E R
Sbjct:    1 MRLIKKYPLISVLHHSGVTYPVPASISYLWNFGSLALFCLVIQLVTGIFLAMHYAANTELAFLSVEHIMRDVNYGWTIRYIHANGASMFFLVVYVHIFRGLYYGSYLYPRQLVWGIGVIILLVMIGTAFMGYVLPWGQMSFWAATVITNLASAIPVVGTDIVYWLWGGFSVDNATLNRFFSFHYTLPFILIGLVAVHIILLHEDGSNNPLGTDIINIDKAPFTPYFTIKDIFGVILFLIFFSYLVFFDPNLLGHPDNYIPANPLVTPAHIVPEWYFLPFYAILRSIPNKLGGVVLLLSAILVLLIMPFIIKSEIRSSQFRPFTAFFFWVFLGNCFLLGWLGGQPVEPPYIFLGQFCTVFYFVYFLFILPFLSQVESR 377          
BLAST of mRNA_M-pyrifera_M_contig1406.6160.1 vs. uniprot
Match: A0A411K7M3_9EUKA (Cytochrome b n=1 Tax=Paravannella minima TaxID=1443144 RepID=A0A411K7M3_9EUKA)

HSP 1 Score: 357 bits (915), Expect = 7.900e-118
Identity = 189/379 (49.87%), Postives = 258/379 (68.07%), Query Frame = 1
Query:    1 MRKIKIVPLINTIYKTAIIYPVSGNITFS*NLGVSAGIMLASQIVTGLFLAMHYIPEAEMAFDSVRHIVVDVNNGLIIRSLHANGSSLFFFVTYLHLFRGLYYGSYAAPRRHV*LSGVVILLLMIVTAFLGYVLP*GQMSY*AATVITNIIAIVPIVGKDSLLVVWGNYSVSNATLQRFFALHFLLPFVILFAVGGHIIALHEHGSSNP-SIGIRHFDNLTFHPFFIFKDIFTTMILLYAYNYYAMEHAPEIID-PDNYVKANPLSTPAHIVPE*YFKMFYAILRSVPNKEFGAFLLLSSILVLFIFPYITKSGLKDSSQRFYHQFYF*LFFSDF*LLT*LGGKPIDEPFVSLGQACTGYYFLYFLVILP*IAKRERRF 1131
            MR +K   L +++Y+TA+ Y V  NIT+  N G  AGI L  QI+TG+FLAMHY    ++AF SV HI+ DVN G ++R +HANG+S+FF V Y+H+FRGLYYGSY  PR+ V   GV+I LLMI+TAF+GYVLP GQMS+ AATVITN+ + VP++G D +  +WG +SV NATL RFF+LH+L PF+++   G H+I LHE  S+N      +  D + F P+F+ KDIF  +I L  + +Y +   P ++   DNY+ ANPL TPAHIVPE YF  FYAILRSVP+K  G  LL+ +I++L + P+  K+ ++ S  R   +  F LFF ++ LL  +GG+P++ PFV +GQ CT +YFLYF+  LP I   E  F
Sbjct:    1 MRIVKKNSLFSSLYQTAVTYMVPSNITYLWNFGSLAGICLIIQIITGIFLAMHYASNVDLAFISVEHIMRDVNYGWLMRYVHANGASMFFLVVYVHIFRGLYYGSYFYPRQAVWGIGVIIFLLMILTAFMGYVLPWGQMSFWAATVITNLASAVPVIGNDIVCWLWGGFSVDNATLNRFFSLHYLFPFILVALAGIHLILLHEVKSNNVIGTNTQFLDKIPFTPYFVIKDIFGLVIFLILF-FYLVYFDPNLLGHSDNYIPANPLVTPAHIVPEWYFLPFYAILRSVPDKLGGVILLVGAIVILLVMPFFVKAQIRSSQFRPIKKILFWLFFFNYLLLGWIGGQPVEFPFVEIGQLCTSFYFLYFIFFLPFIYILEINF 378          
BLAST of mRNA_M-pyrifera_M_contig1406.6160.1 vs. uniprot
Match: A0A0B5GW98_THETB (Cytochrome b n=2 Tax=cellular organisms TaxID=131567 RepID=A0A0B5GW98_THETB)

HSP 1 Score: 354 bits (909), Expect = 4.600e-117
Identity = 184/380 (48.42%), Postives = 255/380 (67.11%), Query Frame = 1
Query:    1 MRKIKIVPLINTIYKTAIIYPVSGNITFS*NLGVSAGIMLASQIVTGLFLAMHYIPEAEMAFDSVRHIVVDVNNGLIIRSLHANGSSLFFFVTYLHLFRGLYYGSYAAPRRHV*LSGVVILLLMIVTAFLGYVLP*GQMSY*AATVITNIIAIVPIVGKDSLLVVWGNYSVSNATLQRFFALHFLLPFVILFAVGGHIIALHEHGSSNPSIGIR-HFDNLTFHPFFIFKDIFTTMILLYAYNYYAMEHAPEIIDPDNYVKANPLSTPAHIVPE*YFKMFYAILRSVPNKEFGAFLLLSSILVLFIFPYITKSGLKDSSQRFYHQFYF*LFFSDF*LLT*LGGKPIDEPFVSLGQACTGYYFLYFLVILP*IAKRERRFLR 1137
            MR +K  PL++ +    I YP   N+++  N G  AG++L +QI+TG+ LAMHY P  ++AF SV HI+ DVN G +IR LHANG+S+FF V Y+H+FRGLYYGSY +PR  +   GV+I L M+ TAF+GYVLP GQMS+  ATVITN+ + +PI+G D +L +WG +SV NATL RFF+LH+L+PFVI   V  H+IALHEHGS+NP +GI  H D + FHP++  KD++  ++ L  +  +   +   +  PDNY+ ANPL TP HIVPE YF  FYAILRS+P+K  G   +  SI++L + P +    ++ +S R  ++ +F LF  D  LL  +GG PI+ PF  +GQ  T +YFL+FL I+P +   E   LR
Sbjct:    1 MRVLKTHPLLSIVNNMLIDYPAPVNLSYLWNFGSLAGVVLVTQIITGIALAMHYTPHVDLAFISVEHIMRDVNYGWLIRYLHANGASMFFIVVYIHIFRGLYYGSYTSPRAMLWSIGVIIFLAMMATAFMGYVLPWGQMSFWGATVITNLFSAIPIIGNDLVLWLWGGFSVDNATLNRFFSLHYLVPFVIAGLVVAHLIALHEHGSNNP-LGIESHLDKVPFHPYYTVKDLYGAVMFLIFFAVFVFFYPNTLGHPDNYIPANPLVTPTHIVPEWYFLPFYAILRSIPDKLGGVLAMGGSIVILLLLPILHTCDIRSTSFRPIYKKFFWLFVLDCALLEWIGGCPIEFPFYEIGQIATIFYFLFFLAIIPAVGYVENLLLR 379          
BLAST of mRNA_M-pyrifera_M_contig1406.6160.1 vs. uniprot
Match: I4DF03_LEUMA (Cytochrome b n=1 Tax=Leucocryptos marina TaxID=299206 RepID=I4DF03_LEUMA)

HSP 1 Score: 353 bits (907), Expect = 7.100e-117
Identity = 179/362 (49.45%), Postives = 250/362 (69.06%), Query Frame = 1
Query:   22 PLINTIYKTAIIYPVSGNITFS*NLGVSAGIMLASQIVTGLFLAMHYIPEAEMAFDSVRHIVVDVNNGLIIRSLHANGSSLFFFVTYLHLFRGLYYGSYAAPRRHV*LSGVVILLLMIVTAFLGYVLP*GQMSY*AATVITNIIAIVPIVGKDSLLVVWGNYSVSNATLQRFFALHFLLPFVILFAVGGHIIALHEHGSSNPSIGI-RHFDNLTFHPFFIFKDIFTTMILLYAYNYYAMEHAPEIIDPDNYVKANPLSTPAHIVPE*YFKMFYAILRSVPNKEFGAFLLLSSILVLFIFPYITKSGLKDSSQRFYHQFYF*LFFSDF*LLT*LGGKPIDEPFVSLGQACTGYYFLYFLVILP 1104
            PL++      I YP   N+++    G +AGI L  Q+VTG+ LAMHY+P  ++AF SV HI+ DVNNG ++R LHANG+S FF V YLHLFRGLYYGSY +PR      GVVI +LM+ TAF+GYVLP GQMS+ AATVITN+ + +P++G+  ++ +WG + V NATL RFF+LH+LLPF I+  V  HI+ LH+ GSSNP IGI    D ++F+ FFI KDIF  +IL   Y+++  ++   +   DNY++ANP+ TPAHIVPE YF  FYAILRS+P+K  G   +  ++L+L + P++  S ++ S  R  HQF+F LF  D+ +L  +GG   + P++ +GQ  T +YFLYF+++LP
Sbjct:    7 PLVSIFTAHLIDYPTPLNLSYMWGFGSAAGIFLVVQLVTGIALAMHYVPHVDLAFLSVEHIMRDVNNGWLLRYLHANGASFFFLVVYLHLFRGLYYGSYQSPRALTWCVGVVIFILMMATAFIGYVLPWGQMSFWAATVITNLFSAIPVIGESLVVWIWGGFCVDNATLNRFFSLHYLLPFAIVALVIAHIVLLHKKGSSNP-IGIYTKVDKVSFYRFFIPKDIFGWLILFMLYSFFVYKYPNYLGHSDNYIEANPMVTPAHIVPEWYFLPFYAILRSIPDKLLGVLAMFGALLILLVIPFLNLSPIRSSVFRPIHQFFFWLFILDYVILGWIGGCHPETPYIEIGQIATAFYFLYFILLLP 367          
BLAST of mRNA_M-pyrifera_M_contig1406.6160.1 vs. uniprot
Match: M4Q968_ANDGO (Cytochrome b n=1 Tax=Andalucia godoyi TaxID=505711 RepID=M4Q968_ANDGO)

HSP 1 Score: 353 bits (905), Expect = 1.680e-116
Identity = 180/381 (47.24%), Postives = 255/381 (66.93%), Query Frame = 1
Query:    1 MRKIKIVPLINTIYKTAIIYPVSGNITFS*NLGVSAGIMLASQIVTGLFLAMHYIPEAEMAFDSVRHIVVDVNNGLIIRSLHANGSSLFFFVTYLHLFRGLYYGSYAAPRRHV*LSGVVILLLMIVTAFLGYVLP*GQMSY*AATVITNIIAIVPIVGKDSLLVVWGNYSVSNATLQRFFALHFLLPFVILFAVGGHIIALHEHGSSNPSIGIRHFDNLTFHPFFIFKDIFTTMILLYAYNYYAMEHAPEIIDPDNYVKANPLSTPAHIVPE*YFKMFYAILRSVPNKEFGAFLLLSSILVLFIFPYITKSGLKDSSQRFYHQFYF*LFFSDF*LLT*LGGKPIDEPFVSLGQACTGYYFLYFLVILP*IAKRERRFLRLS 1143
            MR +K  PL++      + YP   N+++  N G+ AG+ L  QI+TG+FLAMHY P  ++AF SV HI+ DVN G +IR +HANG+S+FF V YLH+FRGLYYGSY +PR  + + G VIL+LM+ TAF+GYVLP GQMS+  ATVITN+ + +PI+G+D +  +WG +SV NATL RFF+LH+LLPF I  A G H+  LHE+GS+NP +G+   D + F+P+F  KD+F  ++           +   +  PDNY++ANPL TP+HIVPE YF  FYAILRS+P+K  G   +  +++ + + PYI  S ++ S  R  H+ +F L   D  +LT +G  P +EPF+++GQ  T YYF YF +I+P + K ER  L++ 
Sbjct:    1 MRLMKRDPLLSIFNSFLVDYPAPINLSYLWNFGILAGVCLGIQILTGIFLAMHYTPHIDLAFLSVEHIMRDVNYGWLIRYMHANGASMFFIVVYLHIFRGLYYGSYISPREIIWVVGGVILVLMMATAFMGYVLPWGQMSFWGATVITNLFSAIPIIGEDIVRWLWGGFSVDNATLNRFFSLHYLLPFAIAAAAGVHLFVLHEYGSNNP-LGVDKVDKIPFYPYFYVKDLFGLLVFFLXXXXXVYFYPNTLGHPDNYLEANPLVTPSHIVPEWYFLPFYAILRSIPDKLGGVLCMGLALVAIIVLPYINTSEIRSSQFRPLHRKFFWLLVVDCVILTWIGQCPAEEPFITVGQIATVYYFAYFFLIVPVLGKLERVLLKMD 380          
BLAST of mRNA_M-pyrifera_M_contig1406.6160.1 vs. uniprot
Match: M4QM59_SECEC (Cytochrome b n=1 Tax=Seculamonas ecuadoriensis TaxID=221724 RepID=M4QM59_SECEC)

HSP 1 Score: 350 bits (899), Expect = 1.360e-115
Identity = 188/375 (50.13%), Postives = 251/375 (66.93%), Query Frame = 1
Query:   22 PLINTIYKTAIIYPVSGNITFS*NLGVSAGIMLASQIVTGLFLAMHYIPEAEMAFDSVRHIVVDVNNGLIIRSLHANGSSLFFFVTYLHLFRGLYYGSYAAPRRHV*LSGVVILLLMIVTAFLGYVLP*GQMSY*AATVITNIIAIVPIVGKDSLLVVWGNYSVSNATLQRFFALHFLLPFVILFAVGGHIIALHEHGSSNPSIGIRH-FDNLTFHPFFIFKDIFTTMILLYAYNYYAMEHAPEIIDPDNYVKANPLSTPAHIVPE*YFKMFYAILRSVPNKEFGAFLLLSSILVLFIFPYITKSGLKDSSQRFYHQFYF*LFFSDF*LLT*LGGKPIDEPFVSLGQACTGYYFLYFLVILP*IAKRERRFLRLS 1143
            PLI  I    I YP   NI++    G+ AGI LA QI+TG+FLAMHY P  ++AF+SV HI+ DVN G +IR  HANG+S+FF V Y+H+FRGLYYGSYAAPR  + + GVVI+ LM+ TAF+GYVLP GQMS+  ATVITN  + VP+VG   L  +WG +SV NATL RFF+LH+LLPF IL  VG H+I LHE GS+NP +GI    D + F+P+F  KD+F  ++    ++ +   +   +  PDNY++ANPL TPAHIVPE YF  FYAILRS+P+K  G   ++ +I+VL   P +  S ++ S  R  H+  F     D  +L  +GG+  + P++ +GQA T YYF+YF+V +P + K ER  LRL 
Sbjct:    7 PLIREINGFIIDYPTPSNISYWWGFGILAGICLAVQILTGIFLAMHYTPHVDLAFNSVEHIMRDVNYGWLIRYAHANGASMFFIVVYIHIFRGLYYGSYAAPRELLWIVGVVIIFLMMGTAFMGYVLPWGQMSFWGATVITNFASAVPLVGDYILHWLWGGFSVDNATLNRFFSLHYLLPFAILGLVGLHLILLHEDGSNNP-LGIESKVDKIAFYPYFYVKDLFGLVVFGMFFSVFVYFYPNLLGHPDNYIEANPLVTPAHIVPEWYFLPFYAILRSIPDKLGGVVAMILAIVVLAFLPILNTSEVRSSQFRPLHKILFWFLVVDSFILGWIGGQTPETPYIEIGQAATVYYFMYFMVFIPVLGKLERILLRLD 380          
BLAST of mRNA_M-pyrifera_M_contig1406.6160.1 vs. uniprot
Match: A0A140F2K1_9EUKA (Cytochrome b n=1 Tax=Moramonas marocensis TaxID=1805496 RepID=A0A140F2K1_9EUKA)

HSP 1 Score: 350 bits (897), Expect = 2.630e-115
Identity = 183/376 (48.67%), Postives = 255/376 (67.82%), Query Frame = 1
Query:    1 MRKIKIVPLINTIYKTAIIYPVSGNITFS*NLGVSAGIMLASQIVTGLFLAMHYIPEAEMAFDSVRHIVVDVNNGLIIRSLHANGSSLFFFVTYLHLFRGLYYGSYAAPRRHV*LSGVVILLLMIVTAFLGYVLP*GQMSY*AATVITNIIAIVPIVGKDSLLVVWGNYSVSNATLQRFFALHFLLPFVILFAVGGHIIALHEHGSSNPSIGI-RHFDNLTFHPFFIFKDIFTTMILLYAYNYYAMEHAPEIIDPDNYVKANPLSTPAHIVPE*YFKMFYAILRSVPNKEFGAFLLLSSILVLFIFPYITKSGLKDSSQRFYHQFYF*LFFSDF*LLT*LGGKPIDEPFVSLGQACTGYYFLYFLVILP*IAKRER 1125
            MR +K+ PL+ +     + YP   NI++  N G+ AG+ L  QI+TG+FLAMHY P  ++AF SV HI+ DVN G +IR  HANG+S+FF V Y+H+FRGLYYGSYA+PR  + + GV I  LM+ TAF+GY+LP GQMS+  ATVITN+ + +PI+G++ +  +WG +SV NATL RFF+LH+LLPF+I   VG H+I LHE GS+NP +GI    D + F+P+F  KD+F  +I    ++ +   +   +  PDNY++ANPL TPAHIVPE YF  FYAILRS+P+K  G   +L +ILVLF+ P+I  S ++ S  R  H+  F L   D  +L  +GG+  + P++ +GQA T YYF YFL+ +P +   ER
Sbjct:    1 MRLLKL-PLLRSFNDFLVDYPTPSNISYWWNFGILAGLCLVIQILTGIFLAMHYTPHIDLAFLSVEHIMRDVNYGWLIRYAHANGASMFFIVVYIHIFRGLYYGSYASPRELLWIVGVAIFFLMMATAFMGYILPWGQMSFWGATVITNLASAIPIIGENIVHWLWGGFSVDNATLNRFFSLHYLLPFIIAGLVGLHLILLHEDGSNNP-LGIDSKTDKIPFYPYFYVKDLFGAIIFAIFFSIFLYFYPNLLGHPDNYIEANPLVTPAHIVPEWYFLPFYAILRSIPDKLGGVVAMLLAILVLFLLPFINTSEIRSSQFRPIHRILFWLLLVDSFILGWIGGQTPETPYIQIGQAATVYYFAYFLIFIPALGIIER 374          
BLAST of mRNA_M-pyrifera_M_contig1406.6160.1 vs. uniprot
Match: A0A513ZSJ9_9ASCO (Cytochrome b (Fragment) n=1 Tax=Pneumocystis sp. TaxID=1913146 RepID=A0A513ZSJ9_9ASCO)

HSP 1 Score: 348 bits (893), Expect = 7.640e-115
Identity = 183/375 (48.80%), Postives = 258/375 (68.80%), Query Frame = 1
Query:    1 MRKIKIVPLINTIYKTAIIYPVSGNITFS*NLGVSAGIMLASQIVTGLFLAMHYIPEAEMAFDSVRHIVVDVNNGLIIRSLHANGSSLFFFVTYLHLFRGLYYGSYAAPRRHV*LSGVVILLLMIVTAFLGYVLP*GQMSY*AATVITNIIAIVPIVGKDSLLVVWGNYSVSNATLQRFFALHFLLPFVILFAVGGHIIALHEHGSSNPSIGIR-HFDNLTFHPFFIFKDIFTTMILLYAYNYYAMEHAPEIIDPDNYVKANPLSTPAHIVPE*YFKMFYAILRSVPNKEFGAFLLLSSILVLFIFPYITKSGLKDSSQRFYHQFYF*LFFSDF*LLT*LGGKPIDEPFVSLGQACTGYYFLYFLVILP*IAKRE 1122
            MR IK+ PL++ +    I  P   N+++  N G   G+ L  QI+TG+ LAMHY+P  + AF SV HI+ DVN G +IR +H+N +S FF   YLH+ RG+YYGSY +PR  V   GV+I LLMI+TAFLGYVLP GQMS   ATVITN+++ +P +G D +  +WG +SV++ATL RFF+LH+LLPF++   V  H+IALHEHGSSNP +GI  + D + FHP+F FKD+ T ++   A +Y+   +   +   DNY+ ANP+STPA IVPE Y   FYAILRS+ NK  G   +L+SILVLFI P +  S ++ S+ R  ++F+F +F ++F LL  LG + ++EP++++GQ  T +YF+YF++I+P IA  E
Sbjct:    1 MRIIKVHPLLSIVNSYLIDSPQPVNLSYLWNFGSLLGVCLGIQILTGITLAMHYVPSIDSAFLSVEHIMRDVNYGWLIRYIHSNTASFFFLFVYLHIARGIYYGSYRSPRSMVWGIGVIIFLLMIITAFLGYVLPFGQMSLWGATVITNLMSAIPWIGTDIVNFIWGGFSVNHATLNRFFSLHYLLPFILAGLVVAHLIALHEHGSSNP-LGITGNVDRIPFHPYFSFKDLVTVLLFFIALSYFVFYNPNVLGHSDNYIMANPMSTPASIVPEWYLLPFYAILRSISNKLLGVVAMLASILVLFILPIVDISRIRGSAFRPLNKFFFWVFATNFLLLMYLGSQHVEEPYITIGQYATIFYFIYFIIIIPIIALIE 374          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1406.6160.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1D8D5X3_9EUKA4.680e-25493.96Cytochrome b n=2 Tax=Paramoeba pemaquidensis TaxID... [more]
A0A5P8HC12_9EUKA1.940e-23284.78Cytochrome b n=1 Tax=Paramoeba aparasomata TaxID=2... [more]
A0A2U9DQS7_9EUKA1.570e-12251.99Cytochrome b n=1 Tax=Clydonella sawyeri TaxID=2201... [more]
A0A411K7M3_9EUKA7.900e-11849.87Cytochrome b n=1 Tax=Paravannella minima TaxID=144... [more]
A0A0B5GW98_THETB4.600e-11748.42Cytochrome b n=2 Tax=cellular organisms TaxID=1315... [more]
I4DF03_LEUMA7.100e-11749.45Cytochrome b n=1 Tax=Leucocryptos marina TaxID=299... [more]
M4Q968_ANDGO1.680e-11647.24Cytochrome b n=1 Tax=Andalucia godoyi TaxID=505711... [more]
M4QM59_SECEC1.360e-11550.13Cytochrome b n=1 Tax=Seculamonas ecuadoriensis Tax... [more]
A0A140F2K1_9EUKA2.630e-11548.67Cytochrome b n=1 Tax=Moramonas marocensis TaxID=18... [more]
A0A513ZSJ9_9ASCO7.640e-11548.80Cytochrome b (Fragment) n=1 Tax=Pneumocystis sp. T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig1406contigM-pyrifera_M_contig1406:14083..15225 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score107.1
Seed ortholog evalue3.8e-21
Seed eggNOG ortholog864069.MicloDRAFT_00030330
Preferred namepetB
KEGG koko:K00410,ko:K00412,ko:K02635,ko:K02637
KEGG Pathwayko00190,ko00195,ko01100,ko02020,ko04260,ko04714,ko04932,ko05010,ko05012,ko05016,map00190,map00195,map01100,map02020,map04260,map04714,map04932,map05010,map05012,map05016
KEGG ModuleM00151,M00152,M00162
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
EggNOG OGs1JRSX@119045,1MV97@1224,2TSZ3@28211,COG1290@1,COG1290@2
COG Functional cat.C
Best tax levelMethylobacteriaceae
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko00194,ko03029
Exons1
Model size1143
Cds size228
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig1406.6160.1prot_M-pyrifera_M_contig1406.6160.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig1406 14197..14424 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815834.3879251-UTR-M-pyrifera_M_contig1406:14082..141961622815834.3879251-UTR-M-pyrifera_M_contig1406:14082..14196Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig1406 14083..14196 +
1692277596.5888855-UTR-M-pyrifera_M_contig1406:14082..141961692277596.5888855-UTR-M-pyrifera_M_contig1406:14082..14196Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig1406 14083..14196 +
1622815834.4203427-UTR-M-pyrifera_M_contig1406:14424..152251622815834.4203427-UTR-M-pyrifera_M_contig1406:14424..15225Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig1406 14425..15225 +
1692277596.6099982-UTR-M-pyrifera_M_contig1406:14424..152251692277596.6099982-UTR-M-pyrifera_M_contig1406:14424..15225Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig1406 14425..15225 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815834.4014015-CDS-M-pyrifera_M_contig1406:14196..144241622815834.4014015-CDS-M-pyrifera_M_contig1406:14196..14424Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1406 14197..14424 +
1692277596.6019144-CDS-M-pyrifera_M_contig1406:14196..144241692277596.6019144-CDS-M-pyrifera_M_contig1406:14196..14424Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1406 14197..14424 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig1406.6160.1

>prot_M-pyrifera_M_contig1406.6160.1 ID=prot_M-pyrifera_M_contig1406.6160.1|Name=mRNA_M-pyrifera_M_contig1406.6160.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=76bp
MLASQIVTGLFLAMHYIPEAEMAFDSVRHIVVDVNNGLIIRSLHANGSSL
FFFVTYLHLFRGLYYGSYAAPRRHV*
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mRNA from alignment at M-pyrifera_M_contig1406:14083..15225+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig1406.6160.1 ID=mRNA_M-pyrifera_M_contig1406.6160.1|Name=mRNA_M-pyrifera_M_contig1406.6160.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1143bp|location=Sequence derived from alignment at M-pyrifera_M_contig1406:14083..15225+ (Macrocystis pyrifera P11B4 male)
ATGAGAAAGATAAAAATTGTACCTTTAATTAATACTATATATAAAACTGC AATTATTTATCCCGTATCTGGTAATATTACTTTTTCATGAAATTTAGGTG TTAGTGCCGGTATTATGTTAGCATCTCAAATAGTTACTGGTTTATTTTTA GCTATGCATTATATTCCAGAGGCTGAGATGGCTTTTGATAGCGTAAGGCA TATAGTCGTAGATGTAAATAATGGTTTAATTATACGTTCATTACACGCTA ATGGTTCATCTTTATTTTTTTTTGTTACATATTTACATCTTTTTAGAGGT CTTTACTATGGTTCTTATGCAGCACCTAGACGCCATGTTTGATTATCGGG GGTTGTTATTTTACTATTAATGATTGTAACAGCCTTTTTAGGTTATGTAT TACCTTGAGGACAAATGAGTTATTGAGCAGCAACTGTTATTACTAATATC ATTGCAATTGTCCCTATAGTTGGTAAAGATTCTTTACTGGTAGTTTGGGG TAATTATAGCGTTTCTAATGCTACTTTACAAAGATTTTTTGCATTACATT TTTTATTACCTTTTGTTATTCTATTTGCTGTAGGGGGACATATTATTGCT TTACATGAGCATGGTTCTAGTAACCCTAGTATTGGTATTAGACATTTTGA TAATTTAACATTTCATCCTTTTTTTATATTTAAAGATATTTTCACTACTA TGATTCTATTATATGCTTATAATTATTATGCTATGGAACATGCGCCAGAA ATTATTGATCCTGATAATTATGTTAAGGCTAACCCTTTATCTACTCCTGC ACATATAGTACCTGAGTGATATTTTAAAATGTTTTATGCTATATTACGTT CAGTACCTAACAAAGAGTTTGGTGCTTTTTTATTATTAAGCTCTATTTTA GTACTATTTATCTTTCCTTATATTACTAAATCAGGTTTAAAAGATTCGTC ACAAAGATTTTATCATCAATTTTATTTTTGATTATTTTTTAGTGATTTTT GATTATTAACTTGATTGGGTGGTAAACCTATCGATGAGCCTTTTGTTAGT TTAGGCCAAGCTTGTACTGGTTATTATTTTCTTTATTTTTTAGTTATTTT ACCTTGAATTGCAAAACGTGAAAGACGTTTTTTAAGATTATCA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig1406:14083..15225+

>mRNA_M-pyrifera_M_contig1406.6160.1 ID=mRNA_M-pyrifera_M_contig1406.6160.1|Name=mRNA_M-pyrifera_M_contig1406.6160.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=456bp|location=Sequence derived from alignment at M-pyrifera_M_contig1406:14083..15225+ (Macrocystis pyrifera P11B4 male)
ATGTTAGCATCTCAAATAGTTACTGGTTTATTTTTAGCTATGCATTATAT
TCCAGAGGCTGAGATGGCTTTTGATAGCGTAAGGCATATAGTCGTAGATG
TAAATAATGGTTTAATTATACGTTCATTACACGCTAATGGTTCATCTTTA
TTTTTTTTTGTTACATATTTACATCTTTTTAGAGGTCTTTACTATGGTTC
TTATGCAGCACCTAGACGCCATGTTTGAATGTTAGCATCTCAAATAGTTA
CTGGTTTATTTTTAGCTATGCATTATATTCCAGAGGCTGAGATGGCTTTT
GATAGCGTAAGGCATATAGTCGTAGATGTAAATAATGGTTTAATTATACG
TTCATTACACGCTAATGGTTCATCTTTATTTTTTTTTGTTACATATTTAC
ATCTTTTTAGAGGTCTTTACTATGGTTCTTATGCAGCACCTAGACGCCAT
GTTTGA
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