mRNA_M-pyrifera_M_contig1406.6158.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig1406.6158.1
Unique NamemRNA_M-pyrifera_M_contig1406.6158.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig1406.6158.1 vs. uniprot
Match: A0A1D8D5W8_9EUKA (Orf1594 n=1 Tax=Paramoeba pemaquidensis TaxID=180228 RepID=A0A1D8D5W8_9EUKA)

HSP 1 Score: 1814 bits (4699), Expect = 0.000e+0
Identity = 1034/1616 (63.99%), Postives = 1211/1616 (74.94%), Query Frame = 1
Query:    1 MLHPIDYRLSKNKF*LST*NSYSLKNYKNLILNDKILNILGFIFKNCFKLSYSFASP*SNPRKYRKYFSNFIIGFDGRRAIKTGPNKVKKLPGFLIPEDYNIIRFHNFSILKIYFLIDKNLETY*AKKQKK*RSPLKYFNMRYNKNKNLIDNQLKLNKNLVNMNIEKKNFKITGFFVYLLNLLNNNSVKQKFYFNLSDQIDFLKMDKKHLYFRFYHDNFKLLNKIRNNYFLFYLINKQNLTLNSGNAGLFNKKKFKHKNHLNIIYLNLNKKMLSVKKNSLFRAQGFSINYQDYKKYITIHKINSIKNKNCSLSNYNNFNFYKQLLINKNFLNVSSKKISDFTFYGKKKIINNFKKYFFFTRLSVLRGLNSSNNFSKFLNKKLQSISLNCFKNNFGTSKNLSFDLNMNRKRGLSLLFYSSSSFNNPKLKEKSINNIYLFKKNKTLDITNNYFQNNLYDDNS----KLNNT-----KFKKN*DLYLLNNRFSTIGSNLDSFNKQSNSNLVYKKQNYYNYKYYISLIKHPNNLNSSIHLENFKKIIYFNKNFLLDSNSNKSSIKNLDYKPYFLKNYELQN*STFSYLLNSKLVSKKSVGKLSFSK-PRSKKLKLNNYFNKLFIYNPLKINFSFNKLLLKKNIYSYLTNYKPNITNDSFKSNKKFKNFFNNNKSNLQIRAKNNLGNVLISITNYNKKKNYLNNLVEYEYSDYFNSSKTSLIKRVNEYKTFLKIKNFNSQGLNLYSINNFNYENSISNDYFSLLNNKKKLVNTTNKYLVNTGSSKISMFKTSINSTKWGYSKNIRLQSLFNTYFKKTFFKFFGNQKVFSQDNLDQINYRLEKSPKNNIGKLLKFKPYTFKSISRLHRYKYNQSILTKYITNEIKYNSILNFFNLMENKKFISKKNLGHKSFKV*FNTLLKAKGGILLNNISFSKFNKLKLFNYSFFPFMKKLQWLMFLNKNIKTKDKYISKESKKKTKKYLVNYKNLIIQKNSYSTYIKRLQFKYFKRAKRSFDMINNNNIKTLPYKFLLFDNSVYNENKSRLSKN-NFNTNFLMNFENISSKKGTFNNIVGSNTYKYKINIYNYRLLNKKIKLKQFYLPIKFNKKLGSIIPLVLKTSFMDSNMGYKKSNNMVINKYIKNRLSNIFLSIKSIHQISKNKKIQLENFNYRVYGLAKKISDVKFLNKKELKNINKLQPKTFLY*KHLK*FNVFIKTKFNFKINNGYNRYNTFKLYENFKNLNFYYYKNFKKHSNYAGLNSSQLLNNNYNKLNTLIFYSTILKFKSSFLYFSNKRSFHKKKLLLN*TYDVLFSSTHSKRLNYLPHIRFKPIKDSIYM*RINNRKLNLLSKYFRARTKFFQNKLNFVSNYSKRSGILSYLKLMESNFLRIKKSMQRELPLVHIRRYLLNQLKKLNNYMRILFKRQKKRLYFKLRQQKG-LSSIISKNSNIYKSPSNTINLSKENKYIFKKLYNFVNTRYFLGKKNLIDYVKKFIEHLFLVIFKFNHLRIFYIKKYQINIMSTKAKLFKNLFNYRLATGFKVPFLVKVICKKLNFDKSLVGCKIGFFGRYSKKLRNRKL*KYVKHLKPSVISTPLDYYNILILQK*GITGIKLSMLRKKTFNFIFN 4812
            MLHPIDYRLSKNKF LST NSYSLKNYKNLILNDKILN+LG+IFKNCFK+SYSFASP SNPRK+RKYFSNFIIGFDGRRAIKTGPNKVKKLPGFLIPEDYNIIRFHNFSILKIYFLIDKNLETY AKKQK  RSPLKYFNMRYNKNKN+I+N L+LNKNLVN+NIEKKN KITGFFVYL NLLNNN VKQK YFNLSD+I+F K D KHLYFRFY+DNFKLLNK+RNNYFLFY+INK+N  +N+   GL  +K F H  + N++Y +   K  ++KK  LF   GF INY DYKKYI+++ IN  K      +N     FY++LL N + LN  ++ I+D  FY +K+I  N KKYFF+++  V   L   N F  FLNKKL+ + LN  KNNF T K  +FDLN++RKRGL+L F S  S     + +K +   +LFK    L    N+ + NL   ++    K NN      K   N +L++LNNRF  I S+  ++N   NSNL+Y+KQNYYN KY+ +++K+    N  I+  NFKKIIYFNKNFL       S +K+ +YK +FLKNY  QN      +LN K+     + K  F K  R KKLK+NNYFNKLFI N           LLKKNIYSYL NY+     D FKS+K  K      KSNL  R + N+GNVL+S TN+NKKKNY   LV+Y+ S YF+SSK  L K++NEYKTFL+I  FN+ G N Y INNFNY+N I                 T+  L++  +SK + FK  +   KW  SK I  + +FN YFKKTFFK F NQ ++S+DN+D+IN RLE  PKNN  KL KFKPYTFKSIS++HRY+ N+SILTKYITNEIKYN ILNF + MENKK I KK LG+KSFK+ F  L +AKG +LLNNIS +KFN LKL+NYSF PF+++ + LMF NKNIK K+  ISKE  KK KKYL N++ L IQKNS+  Y+++LQFKYFKR KRSF +  N NI   PYKFLL   +  N N S    N NF+ NF  + +  S+ K  FN++V  N YKYK+N+YNY + NKK+KLKQFYLPI  NKK+ SI+PLV+K  ++++ +GYKKS+NMVINKYIK RLSNIFLS K+I  +  NKK Q+ENFNYRVYGLAKK SD KFLNKKE K IN+LQPKTFLY +HLK FN F+KTKFNFK+ N YN   +FKLYENFKNLNFYY              SSQLLNNNY+KLNT +FYSTI +F+SSFLY SNK+ FHKKK+L N TYDVLFSST SKRLNYLPH RF+ I++S+YM RIN+RKLNLL KYF+ARTKFF+NKLNFVSNY+KRS ILSYLK MESNFLRIKKSMQRELPL+ I+RYL  QLKKLNNY+RIL KRQKKRLYFK RQ++  L+  ISK   I+K  SN   + KENKYIFKKLY FVN R+FL KKNLIDYVKKFIEHLFLVIFKFNHLR+FYIKKYQINIMSTKAKLFKNLFNYRLATGFKVPFLVKVICKKLNFDKSLVGCKIGFFGRYSKKLRNRKL KYVK LKPSVISTPLDYYNILILQK GITGIKLS+LRKKTFNFIFN
Sbjct:    1 MLHPIDYRLSKNKFWLSTWNSYSLKNYKNLILNDKILNVLGYIFKNCFKVSYSFASPWSNPRKHRKYFSNFIIGFDGRRAIKTGPNKVKKLPGFLIPEDYNIIRFHNFSILKIYFLIDKNLETYWAKKQKNWRSPLKYFNMRYNKNKNMINNPLRLNKNLVNLNIEKKNLKITGFFVYLFNLLNNNYVKQKLYFNLSDRINFFKTDTKHLYFRFYYDNFKLLNKVRNNYFLFYMINKKNSLVNNHKLGLLKQKSFNH--NPNVLYFSGQNKKTNIKKLPLFNNSGFKINYSDYKKYISLYHINRSKKIKFFKNNLGGLVFYRRLLNNNSILNQINR-INDSFFYSRKEIRKNIKKYFFYSKALVSNNLKIKNGFENFLNKKLKVVLLNSSKNNFPTFKKFNFDLNVSRKRGLTLFFNSLISMAPSSVTKKKL---FLFKNKNKL----NFIRKNLVKSSNQYCYKYNNNIKGALKPSINRNLHILNNRFENIISSFKNYNGNPNSNLIYQKQNYYNLKYFNNMVKNSKRSNLFINFNNFKKIIYFNKNFL------NSFLKSNNYKTFFLKNYSSQNWVLLPKVLNLKIRCNNKIKKKQFYKIKRKKKLKINNYFNKLFI-NSTVFKTHXXXXLLKKNIYSYLINYRLEEIKDLFKSDKLSKKSNKRIKSNLFGRNRINMGNVLLSTTNFNKKKNYKYTLVDYD-SLYFDSSKKFLNKKLNEYKTFLRIGKFNTLGFNNYPINNFNYDNFIXXXXXXXXXXXXXXXXXTDNNLIDNTTSKAATFKNLVRLQKWSPSKTITPRFIFNMYFKKTFFKSFKNQDIYSKDNMDKINNRLEGLPKNNSSKLQKFKPYTFKSISKVHRYRSNKSILTKYITNEIKYNFILNFLSSMENKKTIPKKKLGYKSFKIWFKILSRAKGTVLLNNISPTKFNTLKLYNYSFTPFIRRFEKLMFSNKNIKVKETNISKEFSKKIKKYLSNHQILTIQKNSFINYVEKLQFKYFKRVKRSFKIGENKNIIIAPYKFLLEGLNRNNINISSEGLNKNFDNNFYTSLKRSSASKIKFNSVVSPNDYKYKMNVYNYFISNKKMKLKQFYLPINVNKKVKSIVPLVIKNRYVNNKIGYKKSHNMVINKYIKTRLSNIFLSSKTIQLMKNNKKTQVENFNYRVYGLAKKKSDFKFLNKKEFKKINELQPKTFLYWEHLKWFNTFVKTKFNFKVTNSYN---SFKLYENFKNLNFYYXXXXXXXXXXXXXXSSQLLNNNYSKLNTFVFYSTIFRFRSSFLYLSNKKMFHKKKILSNWTYDVLFSSTSSKRLNYLPHTRFRSIRNSLYMWRINSRKLNLLFKYFKARTKFFKNKLNFVSNYAKRSSILSYLKSMESNFLRIKKSMQRELPLLSIKRYLTGQLKKLNNYIRILSKRQKKRLYFKSRQKRRFLNRNISKKL-IHKISSNKPTVFKENKYIFKKLYTFVNKRFFLEKKNLIDYVKKFIEHLFLVIFKFNHLRVFYIKKYQINIMSTKAKLFKNLFNYRLATGFKVPFLVKVICKKLNFDKSLVGCKIGFFGRYSKKLRNRKLWKYVKQLKPSVISTPLDYYNILILQKWGITGIKLSILRKKTFNFIFN 1594          
BLAST of mRNA_M-pyrifera_M_contig1406.6158.1 vs. uniprot
Match: A0A5P8HBZ6_9EUKA (Uncharacterized protein n=1 Tax=Paramoeba aparasomata TaxID=2583407 RepID=A0A5P8HBZ6_9EUKA)

HSP 1 Score: 576 bits (1485), Expect = 1.660e-171
Identity = 625/2020 (30.94%), Postives = 908/2020 (44.95%), Query Frame = 1
Query:    1 MLHPIDYRLSKNKF*LST*NSYSLKNYKNLILNDKILNILGFIFKNCFKLSYSFASP*SNPRKYRKYFSNFIIGFDGRRAIKTGPNKVKKLPGFLIPEDYNIIRFHNFSILKIYFLIDKNLETY*AKKQKK*RSPLKYFNMRYNKNKNLIDNQLKLNKNLVNMNIEKKNFKITGFFVYLLNLLNNNSVKQKFYF---NLSDQIDFLKMDKKHLYFRFYHDNFKLLNKIRNNYFLFYLINKQ-NLTLNSGNAGLFNKKKF----------------------------KHKN-------------------HLNIIYLNLNKKMLSVKKNSLFRAQGFSINYQD---------YKKYITI--------------------------HKINSIKNKNCSLSNYNNFNFYK---QLLINKNFL----NVSSKKISDFTFYGKKKIINNFKKYFFFTRLSVL-----------------RGLNSSNNFSKFLNKKLQSISLN--CFKNNFGTSK---NLSFDL-----------------NMNRKRGLSLLFYSSSSFNNPKLKEKSINNIYLFKKNKTLDITNNYFQNNLYDDNSKLN---------NTKF--KKN*DLYLLN----NRFSTIGSNLDSFNKQSNSN---------LVYKKQNYY--------------------------------------------------NYKYYI-SLIKHPNNLN----SSIHLENF---KKIIYFNK------------------------------------------------------------------------------------------NFLLDSNSNKSSIKNLDYKPYFLKNYELQN*STFSYLLNSK-----------------------------LVSKKSVGKLSFSKPRSKKLKLNNYFNKLFIYNPLKINFS------------FNKLLLKKNIYSYLTNYKPNITNDSFKSNKKFKNFFNNNKSNLQ---------IRAKNNLGNVLISITNYN---KKKNYL--------NNLVEYEYSDYFNSS-----KTSLIKRVNEYKTFLKIKNFNSQGLNLYSINNFNYENSISNDYFS---LLNNKKKLVNTTNKYLVNTGSSKISMFKTSINST---KWGYSK----NIRLQSLFNTYFKKTFFKFFGNQKVFSQDNLDQINYRLEK---SPKNNIGKLLKFKPYTFKSISRLHRYKYNQSILTKYITNEIKYNSILNFFNLMENKKFISKKNLGHKSFKV*FN-TLLKAKGGILLNNISFSKFNKLKLFNYSFFPFMKKL--QWLMFLNKNIKTKDKYIS--KESKKKTKKYL-VNYKNLIIQKNSYSTYIKRLQFKYFKRAKRSFDMINN-----------NNIKTLPYKFLLFDNSVYNENKSRLSKN--NFNTNFLMNFENISSKKGTFNNIVGS----NTYKYKINIYNYRLLNKKIKLKQFYLPIKF-----NKKLGSIIPLVLKTSFMDSNMGYKKSNNMVINKYIKNRLSNIFLSIKSIHQISK-NKKIQLENFNYRVYGLAKKISDVKFLNKKELKNINKLQPKTFLY*KHLK*FNVFIKTKFNFKINNGYNRYNTFKLYENFKNLNFYYYKNFKKHSN--YAGLNSSQLLNNNYNKLNTLIFYSTILKFKSSFLYFSNKRSFHKKKLLLN*TYDVLFSSTHSKRLNYLPHIRFKPIKDSIYM*RINNRKLNLLSKYFRARTKFFQNKLNFVSNYSKRSGILSYLKLMESNFLRIKKSMQRELPLVHIRRYLLNQLKKLNNYMRILFKRQKKRLYFKLRQQKGLSSIISKNSNIYKSPSNTINLSKENKYIFKKLYNFVNTRYFLG--KKNLIDYVKKFIEHLFLVIFKFNHLRIFYIKKYQINIMSTKAKLFKNLFNYRLATGFKVPFLVKVICKKLNFDKSLVGCKIGFFGRYSKKLRNRKL*KYVKHLKPSVISTPLDYYNILILQK*GITGIKLSMLRKKTFNFIFN 4812
            MLHPIDYRL+KNKF LST NSYSLKNY+NLILNDKILN LG IF NCFK+++  A+P +N RK+RKY S +IIGFDGRRAI+ GPNK+KKLP F+IPEDYNIIRF +FSILK++FL+D+NL ++ +++Q K R+PL YFNMR+N  KN   N     KN  N  IEKKNF  T +F+YL+NLLN++ +++  YF   NL+  +++ +   + L F FY++NFKLLNKIRNNYFLFYL NK  +  +   N+  FNK  F                            K KN                      I+  +   K+L   K    +    ++ ++          Y K+I                              INSIKN N S+ +    N  K   ++L  KNF     N+   +++ F  Y K      + +Y  ++++ +                  RGL   + F    N  L    LN  C   N   SK    L  +L                 N  R++G+   F         K  + + NN+Y+ K+   +     Y QNNL +   KLN         N K+  K      LL+    N+      N  +FNK S            LV+KK+  Y                                                  N  Y + S  +  N LN    + + L+NF   KK+ + NK                                                                                          ++LL  N  K S+K   Y+ +FLK ++L    T   L+N+K                             L+  K+ G+  F    +K L +   FN + I N +KINF+             N LL KK IY +            +K N+ FKN    NK N++            KNNL  ++ S    N   K+  Y         NNL  Y +    +       KTSL   +N Y    K KN    GLN +SI N+NY N +  +Y S   LL      +N   +YL     +K+   KT IN++   K  +       + L ++ NT FK  F K F +  + S  ++   + ++       K    + ++ +PY+ +S+S++ RYK++   L+ Y+++++    +L  +     KK + +K++G    ++ +  ++LK++  IL  N    K +K   ++ S      ++  ++ + L    +   + I   K  KK+ K+++ + Y     +   YS   K  QF YFK   +  + + +           N  + LPYK L   + +Y  ++  +S N  N+  ++L+NF+     K    N   +    N +KYKI      L NK IK +Q  L   F       K      +  K+     N+  KKS N++INKYI  R+ NIF+S++ + ++ K N    L++ N+R YGL KK+   +   K +   + +LQP  FLY  HLK FN+F+    N + +  YN Y            NF+Y     K +N  Y+  +   +  NN+  L  L+ YS   KFKS F Y +N       +L+L+  + + FS   SKR+ Y+ H RFK IKD+IYM R+  RKL  L ++F  +T+ ++ K         +S +  YL+ M  NF    K   R LPL      +  + KK N Y+   +K       FKL                                    + N       L   +K+LI+YVKKF+E+LF ++FKFN+LR+FYIK Y++NIM TKAKLFKNLFNYRLATGFKVPFLVKVICKKLN+D  +VGCKIGFFGRYS+KLRNRK+ +YV+H+KPSVISTP+DYYN++ILQK GITGIKLS+LRKK F F+FN
Sbjct:    1 MLHPIDYRLAKNKFWLSTWNSYSLKNYRNLILNDKILNALGKIFANCFKITFPVAAPWTNFRKFRKY-SQYIIGFDGRRAIRLGPNKIKKLPNFIIPEDYNIIRFADFSILKVFFLVDQNLASW-SERQSKWRTPLLYFNMRFNI-KNKKKNLPFFRKNFFNTLIEKKNFNSTDYFIYLINLLNHSHIRRLKYFDITNLNFSLNYFQKTNRSLIFYFYYNNFKLLNKIRNNYFLFYLKNKNYSYQVFINNSLYFNKNLFCKMSPVYNFSLSKLFSNTKNWQIKPKVLKIKNIPFSFELPKAQRWAVGITGSTKILKNDFTNKLLLSNKAKFTKITNLTVRFKKTPNFKIKNAYYKHINFLLFPSFIKKPLRGGFLTSKPLLNSVKRSINSIKNINISIKSILFLNLAKFNGKILFIKNFKGVLKNLICNRLTFFKNYAKNTYF--YFRYIKYSKIKIFKTNRIVSRVTKSNSPKQRGLLLLHPFKIGGNIDLGRFILNKKCLLKNTKLSKLRKTLEVELISIEKLLWNQRIWRPKFNKWRRKGIRRRF---------KQHKPAKNNVYIPKQ---IIFLKPYIQNNLKEKLVKLNYSQRIYSTHNYKYWPKAMRRKLLLSQKWFNKKPKRRVNYLNFNKLSLEQQKILKKRYFLVFKKKKIYLSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLNYLLWSRYEIKNRLNFIKENYVLLKNFWSKKKVFWKNKKNLIKFFLVLKSLKRKSIFLNTIQFSLKIKNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNLSRSLNYSLSTTSYLLSQNRIKISLK---YRKFFLKAFKL----TEGKLINNKGFMGNLSKRLNNNINKFLRLGGGSSIIKQLLYNKNKGQFYFY---AKNLSVFKKFNSISIKNSIKINFNNLAKINNILSMKLNVLLEKKRIYRF------------YKYNRLFKN---ENKFNVKPAFLKFSQHYLRKNNLKFLMSSTVIKNNSLKRSRYSIKFQTAISNNLFLYPFLFISHPPSKIKIKTSLNNSLNTYIRISKFKN----GLNKFSILNYNYSNLLWKNYESNNFLLTGCLTKINQ--RYLCFLIRNKVKK-KTIINASFLQKLNFFSYRTFGLNLHTVLNTRFKHKFSKHFQHYDIHSWWDIWWTDKKINDWRAYSKAADKRFIRLRPYSIRSMSKIQRYKFHNVFLSPYLSDQLPVAEVLEGYKRYGEKKKLLRKHIGKLKIRLRWRRSILKSRRKILFKN----KLHKNIAWSVSLKTLSLRIWNEYFLLLKAQHRKVQEVIDPLKTFKKRLKRFVKITYFTFRAEMLKYSGREKFFQFYYFKNIFQIKNKLKSQKTAMQKNIGLNRSRFLPYKILF--SGIYLNSREEISSNFLNYLPHYLLNFKFNKFSKYMVTNFHSNQNYYNMFKYKIKGRKVFLNNKYIKFEQTILKNTFICGNSGLKKPFFFNIFFKSRIRIKNLKDKKSKNLLINKYISKRMGNIFISLQKMLELKKKNTPEALKDLNFRAYGLIKKLEPRRIKLKIKNNRVLELQPNKFLYWAHLKWFNLFVSKSINNRFSKYYNYYYDXXXXXXXXXXNFFYLSKVNKKTNKLYSNFSFGIVYKNNFRSLYKLMHYSA--KFKSKFFYLTNNLDLQ-YRLVLSWAHAIKFSFNRSKRIGYIAHKRFKKIKDNIYMWRVYARKLGKLRRFFFFKTRTYKKKSRLAKTKEYKSKVGLYLQTMRVNFKAYAKKANRALPLKSFLLKIRFKFKKFNKYILRWWK-------FKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLIRNLFKKSRVLRFYRKDLINYVKKFVEYLFFLVFKFNNLRLFYIKIYKMNIMGTKAKLFKNLFNYRLATGFKVPFLVKVICKKLNYDNGMVGCKIGFFGRYSRKLRNRKIWRYVRHIKPSVISTPIDYYNVIILQKWGITGIKLSILRKKIFGFVFN 1955          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1406.6158.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A1D8D5W8_9EUKA0.000e+063.99Orf1594 n=1 Tax=Paramoeba pemaquidensis TaxID=1802... [more]
A0A5P8HBZ6_9EUKA1.660e-17130.94Uncharacterized protein n=1 Tax=Paramoeba aparasom... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig1406contigM-pyrifera_M_contig1406:84..4895 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons1
Model size4812
Cds size993
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig1406.6158.1prot_M-pyrifera_M_contig1406.6158.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig1406 504..1496 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815834.2655404-UTR-M-pyrifera_M_contig1406:83..5031622815834.2655404-UTR-M-pyrifera_M_contig1406:83..503Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig1406 84..503 +
1692277596.5340943-UTR-M-pyrifera_M_contig1406:83..5031692277596.5340943-UTR-M-pyrifera_M_contig1406:83..503Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig1406 84..503 +
1622815834.2983327-UTR-M-pyrifera_M_contig1406:1496..48951622815834.2983327-UTR-M-pyrifera_M_contig1406:1496..4895Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig1406 1497..4895 +
1692277596.5554228-UTR-M-pyrifera_M_contig1406:1496..48951692277596.5554228-UTR-M-pyrifera_M_contig1406:1496..4895Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig1406 1497..4895 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815834.280757-CDS-M-pyrifera_M_contig1406:503..14961622815834.280757-CDS-M-pyrifera_M_contig1406:503..1496Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1406 504..1496 +
1692277596.5456867-CDS-M-pyrifera_M_contig1406:503..14961692277596.5456867-CDS-M-pyrifera_M_contig1406:503..1496Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1406 504..1496 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig1406.6158.1

>prot_M-pyrifera_M_contig1406.6158.1 ID=prot_M-pyrifera_M_contig1406.6158.1|Name=mRNA_M-pyrifera_M_contig1406.6158.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=331bp
MRYNKNKNLIDNQLKLNKNLVNMNIEKKNFKITGFFVYLLNLLNNNSVKQ
KFYFNLSDQIDFLKMDKKHLYFRFYHDNFKLLNKIRNNYFLFYLINKQNL
TLNSGNAGLFNKKKFKHKNHLNIIYLNLNKKMLSVKKNSLFRAQGFSINY
QDYKKYITIHKINSIKNKNCSLSNYNNFNFYKQLLINKNFLNVSSKKISD
FTFYGKKKIINNFKKYFFFTRLSVLRGLNSSNNFSKFLNKKLQSISLNCF
KNNFGTSKNLSFDLNMNRKRGLSLLFYSSSSFNNPKLKEKSINNIYLFKK
NKTLDITNNYFQNNLYDDNSKLNNTKFKKN*
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mRNA from alignment at M-pyrifera_M_contig1406:84..4895+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig1406.6158.1 ID=mRNA_M-pyrifera_M_contig1406.6158.1|Name=mRNA_M-pyrifera_M_contig1406.6158.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=4812bp|location=Sequence derived from alignment at M-pyrifera_M_contig1406:84..4895+ (Macrocystis pyrifera P11B4 male)
ATGTTACATCCTATAGATTACAGATTATCTAAAAATAAATTTTGACTATC AACTTGAAATAGTTATTCTTTAAAAAATTATAAAAATTTAATATTAAATG ATAAAATATTAAATATTTTAGGGTTTATTTTTAAAAATTGTTTTAAATTA TCTTATTCTTTTGCTTCTCCATGAAGTAACCCAAGAAAGTATAGAAAATA TTTTTCTAATTTTATAATTGGTTTTGATGGTAGACGTGCTATAAAAACGG GGCCTAATAAAGTAAAAAAATTACCAGGTTTTTTAATTCCGGAGGATTAT AATATAATAAGATTTCATAATTTTAGTATTTTAAAAATTTATTTTTTAAT TGATAAAAATTTAGAAACTTATTGAGCTAAAAAGCAAAAAAAATGAAGAA GTCCTTTAAAATATTTTAATATGCGTTATAATAAAAATAAAAATTTGATT GATAATCAATTAAAATTAAATAAAAATTTAGTTAATATGAATATAGAGAA AAAAAATTTTAAAATAACTGGTTTTTTTGTTTATTTATTAAACTTATTAA ATAATAATTCAGTTAAGCAAAAATTTTATTTTAATTTGTCTGATCAAATA GATTTTTTAAAAATGGATAAGAAGCATTTATATTTTAGATTTTATCATGA TAATTTCAAATTATTAAATAAAATACGTAATAATTATTTTTTATTCTATT TAATTAATAAACAAAATCTTACATTAAATAGTGGTAACGCGGGGTTGTTT AATAAAAAAAAATTTAAACATAAAAATCATTTAAATATTATATATTTAAA TCTTAATAAAAAGATGCTTTCTGTTAAAAAAAATTCTTTATTTAGAGCTC AGGGGTTCTCGATTAATTATCAAGATTATAAAAAGTATATTACTATTCAT AAAATCAATAGTATAAAAAACAAAAATTGTTCATTAAGTAATTATAATAA TTTTAATTTTTATAAACAGTTGTTAATAAATAAGAATTTTTTAAATGTAT CATCTAAAAAAATTTCTGATTTTACTTTTTATGGTAAAAAAAAAATCATA AATAATTTTAAAAAATATTTTTTTTTTACTAGGTTATCTGTTTTACGCGG TTTAAATTCTAGTAATAATTTTAGTAAGTTTTTAAATAAAAAATTACAAA GTATTTCGCTGAATTGCTTTAAAAATAATTTTGGAACATCTAAAAATTTA AGTTTTGATTTAAATATGAATCGTAAGAGGGGTTTATCTTTATTATTTTA TAGTAGTAGTTCTTTTAATAATCCAAAACTAAAAGAAAAATCAATAAATA ATATATATTTATTCAAAAAGAATAAAACGTTAGATATAACTAATAACTAT TTTCAAAACAATTTATACGATGATAATTCTAAATTAAATAATACTAAATT CAAAAAAAATTGAGATTTATATTTATTAAATAATAGATTTAGTACTATTG GGTCTAATTTAGATAGCTTTAATAAACAGTCAAATTCTAATTTAGTTTAT AAAAAACAAAATTATTATAATTATAAATATTATATATCATTAATAAAACA TCCTAATAATTTAAATTCTTCTATACATCTTGAAAATTTTAAAAAAATCA TATATTTTAATAAAAATTTTTTATTAGATTCTAATTCTAATAAATCTTCT ATAAAAAATTTAGATTATAAACCATATTTTTTAAAGAATTATGAACTTCA AAATTGATCTACTTTTAGTTATTTATTAAATTCTAAATTAGTATCTAAAA AAAGTGTAGGTAAATTATCTTTTTCAAAACCAAGATCAAAAAAATTAAAG TTAAATAATTATTTTAATAAATTATTTATTTATAATCCTTTAAAAATAAA TTTTAGTTTTAATAAATTATTATTAAAAAAAAATATTTATTCGTATTTGA CTAATTATAAACCAAATATTACAAATGATTCTTTTAAATCAAATAAAAAA TTTAAAAATTTTTTCAATAATAACAAATCTAATTTACAAATCAGAGCTAA AAATAATTTAGGTAATGTATTAATATCTATTACTAATTATAATAAAAAAA AAAATTATTTAAATAATTTAGTTGAATATGAATATTCTGATTATTTTAAT TCTTCAAAAACTTCTTTAATAAAAAGGGTTAATGAATATAAAACCTTTTT AAAAATTAAAAATTTTAATTCGCAAGGGTTGAATTTGTATTCTATAAACA ATTTTAATTATGAAAATTCTATTTCTAACGATTATTTTTCTTTATTAAAT AATAAAAAAAAATTAGTTAATACTACTAATAAATATTTAGTTAATACTGG TAGTAGTAAAATTTCTATGTTTAAAACTTCCATTAATTCTACAAAATGGG GTTATTCTAAAAATATAAGATTACAATCTTTATTTAATACTTATTTTAAA AAAACTTTTTTTAAATTTTTTGGAAATCAAAAAGTTTTTAGTCAAGACAA TTTAGATCAAATAAATTATAGATTAGAAAAATCTCCTAAAAATAATATAG GAAAGTTATTAAAATTTAAACCTTATACTTTTAAAAGTATATCTAGGTTA CACCGTTATAAATATAATCAATCAATTTTAACAAAGTATATAACAAATGA AATAAAATATAATTCTATTTTAAATTTTTTTAATTTGATGGAAAATAAAA AATTTATATCTAAAAAAAATTTAGGCCATAAATCTTTTAAAGTTTGATTT AATACGTTATTAAAAGCAAAAGGGGGTATATTATTAAATAATATATCTTT TTCAAAATTTAATAAATTAAAATTATTTAATTATTCTTTTTTTCCTTTTA TGAAAAAGTTACAGTGGTTAATGTTTTTAAATAAAAATATAAAAACTAAA GATAAATATATATCAAAAGAATCTAAAAAAAAAACTAAAAAATATTTAGT TAACTATAAGAATTTGATTATTCAAAAAAATAGTTATAGTACTTATATAA AAAGATTACAATTTAAATATTTCAAACGTGCTAAAAGGTCTTTTGATATG ATTAATAATAATAATATTAAAACATTACCTTACAAGTTTTTATTATTTGA TAATTCTGTATATAATGAAAATAAATCGAGACTATCTAAAAATAATTTTA ACACTAATTTTTTAATGAATTTTGAAAACATTTCTAGTAAGAAAGGTACT TTTAATAATATAGTAGGTTCTAACACCTATAAATATAAAATAAATATTTA TAATTATCGTTTATTAAATAAAAAAATTAAATTAAAACAATTTTATTTAC CTATAAAATTTAATAAAAAACTGGGCTCTATTATACCTTTAGTTTTAAAA ACAAGTTTTATGGATAGTAATATGGGTTATAAGAAATCAAATAATATGGT TATAAATAAATATATAAAAAACAGGTTGTCTAATATTTTTTTATCTATTA AGTCTATACATCAAATAAGTAAAAATAAAAAAATTCAATTAGAAAATTTT AATTATAGAGTTTACGGGTTAGCCAAAAAAATATCAGATGTTAAATTTTT AAATAAAAAGGAGTTAAAAAATATAAATAAGTTACAACCAAAAACTTTTT TATATTGAAAACATCTAAAATGATTTAATGTATTTATTAAAACAAAATTT AATTTTAAAATAAATAATGGTTATAATCGTTATAATACTTTTAAATTATA TGAGAATTTTAAAAATTTAAACTTTTATTATTATAAAAATTTTAAAAAAC ATTCTAATTATGCAGGTTTAAATAGTTCTCAATTATTAAATAATAATTAT AATAAATTAAATACTCTTATTTTTTATTCTACTATTTTAAAATTTAAAAG TTCTTTTTTATATTTTTCGAATAAAAGGTCGTTTCATAAAAAAAAATTAT TATTAAATTGAACTTATGATGTATTATTTTCATCGACACATAGTAAACGT TTGAACTATTTACCTCATATTAGATTTAAACCTATAAAAGATTCTATTTA TATGTGACGTATTAATAATCGTAAACTAAATTTATTATCTAAATATTTTA GAGCAAGAACTAAATTTTTTCAAAATAAGTTAAATTTTGTATCTAATTAT TCTAAACGTAGTGGTATTTTAAGTTATTTAAAATTAATGGAATCTAATTT TTTAAGAATTAAAAAATCTATGCAAAGGGAATTACCATTAGTACATATTA GAAGATATTTATTAAACCAGTTGAAAAAGTTAAATAATTATATGAGAATT TTATTTAAAAGACAAAAAAAACGTTTGTATTTCAAGTTAAGACAACAAAA GGGTCTATCTTCTATTATATCTAAAAATAGCAATATTTATAAATCCCCAT CGAATACTATAAATTTATCAAAAGAAAATAAATATATATTTAAAAAATTA TATAATTTTGTTAATACTCGTTATTTTTTAGGTAAAAAAAATCTTATTGA TTATGTTAAAAAATTCATTGAGCATTTATTTTTAGTTATTTTTAAATTTA ATCATTTACGTATATTTTATATAAAAAAATATCAGATTAATATAATGAGT ACTAAAGCTAAGTTGTTTAAAAATTTATTTAATTATAGATTAGCTACTGG ATTTAAAGTACCATTTTTAGTCAAGGTTATTTGTAAAAAATTAAATTTTG ATAAATCTTTAGTTGGGTGTAAAATTGGGTTTTTTGGGCGTTATTCAAAA AAATTAAGAAATAGAAAATTATGAAAATATGTCAAACATTTAAAACCTAG TGTTATAAGTACACCTTTAGATTATTATAATATTTTAATCTTACAAAAAT GAGGGATTACTGGTATTAAATTAAGTATGCTTAGAAAAAAAACTTTTAAT TTTATTTTTAAT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig1406:84..4895+

>mRNA_M-pyrifera_M_contig1406.6158.1 ID=mRNA_M-pyrifera_M_contig1406.6158.1|Name=mRNA_M-pyrifera_M_contig1406.6158.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1986bp|location=Sequence derived from alignment at M-pyrifera_M_contig1406:84..4895+ (Macrocystis pyrifera P11B4 male)
ATGCGTTATAATAAAAATAAAAATTTGATTGATAATCAATTAAAATTAAA
TAAAAATTTAGTTAATATGAATATAGAGAAAAAAAATTTTAAAATAACTG
GTTTTTTTGTTTATTTATTAAACTTATTAAATAATAATTCAGTTAAGCAA
AAATTTTATTTTAATTTGTCTGATCAAATAGATTTTTTAAAAATGGATAA
GAAGCATTTATATTTTAGATTTTATCATGATAATTTCAAATTATTAAATA
AAATACGTAATAATTATTTTTTATTCTATTTAATTAATAAACAAAATCTT
ACATTAAATAGTGGTAACGCGGGGTTGTTTAATAAAAAAAAATTTAAACA
TAAAAATCATTTAAATATTATATATTTAAATCTTAATAAAAAGATGCTTT
CTGTTAAAAAAAATTCTTTATTTAGAGCTCAGGGGTTCTCGATTAATTAT
CAAGATTATAAAAAGTATATTACTATTCATAAAATCAATAGTATAAAAAA
CAAAAATTGTTCATTAAGTAATTATAATAATTTTAATTTTTATAAACAGT
TGTTAATAAATAAGAATTTTTTAAATGTATCATCTAAAAAAATTTCTGAT
TTTACTTTTTATGGTAAAAAAAAAATCATAAATAATTTTAAAAAATATTT
TTTTTTTACTAGGTTATCTGTTTTACGCGGTTTAAATTCTAGTAATAATT
TTAGTAAGTTTTTAAATAAAAAATTACAAAGTATTTCGCTGAATTGCTTT
AAAAATAATTTTGGAACATCTAAAAATTTAAGTTTTGATTTAAATATGAA
TCGTAAGAGGGGTTTATCTTTATTATTTTATAGTAGTAGTTCTTTTAATA
ATCCAAAACTAAAAGAAAAATCAATAAATAATATATATTTATTCAAAAAG
AATAAAACGTTAGATATAACTAATAACTATTTTCAAAACAATTTATACGA
TGATAATTCTAAATTAAATAATACTAAATTCAAAAAAAATTGAATGCGTT
ATAATAAAAATAAAAATTTGATTGATAATCAATTAAAATTAAATAAAAAT
TTAGTTAATATGAATATAGAGAAAAAAAATTTTAAAATAACTGGTTTTTT
TGTTTATTTATTAAACTTATTAAATAATAATTCAGTTAAGCAAAAATTTT
ATTTTAATTTGTCTGATCAAATAGATTTTTTAAAAATGGATAAGAAGCAT
TTATATTTTAGATTTTATCATGATAATTTCAAATTATTAAATAAAATACG
TAATAATTATTTTTTATTCTATTTAATTAATAAACAAAATCTTACATTAA
ATAGTGGTAACGCGGGGTTGTTTAATAAAAAAAAATTTAAACATAAAAAT
CATTTAAATATTATATATTTAAATCTTAATAAAAAGATGCTTTCTGTTAA
AAAAAATTCTTTATTTAGAGCTCAGGGGTTCTCGATTAATTATCAAGATT
ATAAAAAGTATATTACTATTCATAAAATCAATAGTATAAAAAACAAAAAT
TGTTCATTAAGTAATTATAATAATTTTAATTTTTATAAACAGTTGTTAAT
AAATAAGAATTTTTTAAATGTATCATCTAAAAAAATTTCTGATTTTACTT
TTTATGGTAAAAAAAAAATCATAAATAATTTTAAAAAATATTTTTTTTTT
ACTAGGTTATCTGTTTTACGCGGTTTAAATTCTAGTAATAATTTTAGTAA
GTTTTTAAATAAAAAATTACAAAGTATTTCGCTGAATTGCTTTAAAAATA
ATTTTGGAACATCTAAAAATTTAAGTTTTGATTTAAATATGAATCGTAAG
AGGGGTTTATCTTTATTATTTTATAGTAGTAGTTCTTTTAATAATCCAAA
ACTAAAAGAAAAATCAATAAATAATATATATTTATTCAAAAAGAATAAAA
CGTTAGATATAACTAATAACTATTTTCAAAACAATTTATACGATGATAAT
TCTAAATTAAATAATACTAAATTCAAAAAAAATTGA
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