mRNA_M-pyrifera_M_contig14059.6157.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig14059.6157.1 vs. uniprot
Match: D7FQ05_ECTSI (Ankyrin repeat domain 16 isoform 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ05_ECTSI) HSP 1 Score: 591 bits (1524), Expect = 1.870e-192 Identity = 394/797 (49.44%), Postives = 456/797 (57.21%), Query Frame = 1
Query: 1 SGAPIVRYEIQRLVLDENHPDWDAGR--DQTTXXXXXXXXXXXXXXXXRKSGDTVTNPTAPSTXXSLADASXXXXXVGAASTAADSGPGSLAAPEVPLKALGTGDEE-------SGPLEAGPPPVDEDRKQVGVWIGQRTDSMTPYYTTRGLPMYCRALFRVRAGNSVGWGPWSPSSDSLEAQDIILPAKRGATYMLMRWFNKPEGDVSRWELSRRYFKYGVDFRGDDDSSWIVCSSDIPGLSGGESTFRCKGLMPGTEYQFRLRAFSNGVWQSYQESVVSSPFKTICSPPDPPPSCPRTLQLESCSPTTATVTGGVVADTGALLAVAA---STXXXXXXXXXXXXXXXXDKGVSCYGGXXXSANQNKEAVGSSCTAVTLAAAIARGEARAQAEWHDERFRGGXXXXXXXXXXXXXXXXXXGGSAIKDGDRRDTAEGRKYGDRST---LSRGATKD-GHGKGIAE--------------GENGDPSTFGQGSREGRGGGGEKGXXXXXXXXXXXEYARRGVCGDGDGVE---EQPL--------RVKEAKGNGVEQKVEELESTERGLPDAG-ASAWSTLMVLEWDGGCTNGAITTNYEVWGMADAFQGE--TGGGGEWRHVATTEAAPTVTLSGLRQAQPYRFKVRAQNALGWSDFGPPTAPLVLNPLRPCVAPELVDRGVTWLSLRLRAPPGAGLVLGFELQMCRWEPGMSEGEEAWATISGGGGGVGSSSKITTR----------------EESYVAWDLRPGAGYRFKARARTVFGWSPEGHASEIISTVRRF 2211
+G PI RYEIQRLVLD +HPDWD GR +T XXXXXXXXX XX XXXXX A P A G+ +E SG +DED+K++GVWIG+RTD ++PY+T GLP YCRALFRVRAGN GWGPWSPSSD+LEAQDIILP KRGAT MLMRWFNKP+GDV RWELSRR FKYG DFRGD+D SWI+CS DIPGL GESTFRCKGLMPGTEYQFRLRA+SNG WQ+ +ES+VSSPFKTICSPPD PP+CP T QL S V GG+V DTGALL+ A +T XXXX G A A AAA+ RG+ARA+ ++ D G GS DG R +T +GD+ + + A K HG+G AE D + + E E+ + RGV D E E P K G E K E ES E A S+ ST MVLEWD GCTNG+ITTNYEVWG+AD+ QG+ T G G+W VA T+AAPT TLSGLR+AQPYRFKVRA+N LGWS+FGPPT P+VLNPLRPC APELVDRG+TWL+L+LRAPPGAGL+LGFE+ MCRW PGMSEGEE W + G EES + WDL+PGAGYRFKARARTVFGWSP G AS++ +T RRF
Sbjct: 547 NGEPITRYEIQRLVLDRHHPDWDKGRVLAKTGSSELLTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATQAPAETPACVGSGVESGSTEESRVKLPSVSGGXXXXXXAMDEDKKKIGVWIGRRTDKLSPYHTAGGLPTYCRALFRVRAGNLAGWGPWSPSSDALEAQDIILPIKRGATQMLMRWFNKPDGDVLRWELSRRVFKYGTDFRGDNDDSWILCSRDIPGLREGESTFRCKGLMPGTEYQFRLRAYSNGCWQASEESIVSSPFKTICSPPDAPPACPCTRQLAS----DPLVVGGMV-DTGALLSADAEEPATSGITRGDNRRDGXXXXXXXXXXVDGRGSVDAGGDAAFSRRTRAAAAAAAVVRGKARAEEDFADT---GRDVNGCADAGSESRYDGHSSGSGGDDG-RTET-----HGDQGAGEGVGKAACKSIVHGEGRAEVMGLEVKDWDKCVRTSRDDEEIIRRRTHEATSQAEEQ------DEVGMEQTGARGVRLSNDEAESIGESPFLPELSGDATTKRNHGELEEGKSREDESVEDLAKTAKLCSSASTTMVLEWDAGCTNGSITTNYEVWGVADSTQGQDKTSGSGKWTLVALTKAAPTATLSGLREAQPYRFKVRARNGLGWSEFGPPTPPVVLNPLRPCEAPELVDRGITWLALKLRAPPGAGLLLGFEMHMCRWAPGMSEGEETWRLVVDSQREQGGREXXXXXXXXXXXXXXXXXXXXXEESRMVWDLKPGAGYRFKARARTVFGWSPGGPASDVYNTARRF 1323
BLAST of mRNA_M-pyrifera_M_contig14059.6157.1 vs. uniprot
Match: A0A6H5KFL4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFL4_9PHAE) HSP 1 Score: 589 bits (1519), Expect = 2.100e-192 Identity = 398/820 (48.54%), Postives = 470/820 (57.32%), Query Frame = 1
Query: 1 SGAPIVRYEIQRLVLDENHPDWDAGRDQ---------TTXXXXXXXXXXXXXXXXRKSGDTVTNPTAPSTXXSLADASXXXXXVGAASTAADSGP---------GSLAAPEVPLKALGTGDEESGPLEAGPPPVDEDRKQVGVWIGQRTDSMTPYYTTRGLPMYCRALFRVRAGNSVGWGPWSPSSDSLEAQDIILPAKRGATYMLMRWFNKPEGDVSRWELSRRYFKYGVDFRGDDDSSWIVCSSDIPGLSGGESTFRCKGLMPGTEYQFRLRAFSNGVWQSYQESVVSSPFKTICSPPDPPPSCPRTLQLESCSPTTATVTGGVVADTGALLAVAASTXXXXXXXXXXXXXXXXDKGVSCYGGXXXSANQNKEAVGSSCT-AVTLAAAIARGEARAQAEWHDERFRGGXXXXXXXXXXXXXXXXXXGGSAIKDGDRRDTAEGRKYGDRST------LSRGATKDGHGKGIAEG---ENGD---PSTFGQGSREGRGGGGEKGXXXXXXXXXXXEYARRGV--CGDGDGVEEQP--------LRVKEAKGNGVEQKVEELESTE--RGLPDAGASAWSTLMVLEWDGGCTNGAITTNYEVWGMADAFQGE--TGGGGEWRHVATTEAAPTVTLSGLR---------------QAQPYRFKVRAQNALGWSDFGPPTAPLVLNPLRPCVAPELVDRGVTWLSLRLRAPPGAGLVLGFELQMCRWEPGMSEGEEAWATISGGGGGVGSSSK-----------------------ITTREESYVAWDLRPGAGYRFKARARTVFGWSPEGHASEIISTVRRF 2211
+G PI RYEIQRLVLD +HPDWD GR TTXXXXXXXXXXXXXXXX XX XXXXX A+ A P GS V L ++ G +G + DED+KQ+GVWIG+RTD ++P++T GLP YCRALFRVRAGN GWGPWSPSSD+LEAQDIILP KRGAT ML+RWFNKP+GDV RWELSRR FKYG DFRGD+D SWI+CS DIPGL GESTFRCKGLMPGTEYQFRLRA+SNG WQ+ +ES+VSSPFKTICSPPD PP+CPR QL S V GG+V DTGALL+ A X S + ++A S T A AAA+ RG+ RA+ ++ D G S+ DGD R T +GD+ ++ +T +G G+ G E+ D P++ R R + RGV + + + E P K E K E ES E G+SA ST MVLEWD GCTNG++TTNYEVWG+AD+ QG+ T G G+W VA TEAAPT TLSGLR QAQPYRFKVRA+N LGWS+FGPPT P+VLNPLRPC APELVDRG+TWL+L+LRAPPGAGL+LGFE+ MCRW PGMSEGEE W+ + V S + REES + WDL+PGAGYRFKARARTV GWSP G S++ +T RRF
Sbjct: 467 NGEPITRYEIQRLVLDRHHPDWDKGRVLAKTGSSELLTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEATQATAEAPACFGSRVESGSTEESRVKLPSVSGGGSGTGTM-------DEDKKQIGVWIGRRTDKLSPHHTAGGLPTYCRALFRVRAGNLAGWGPWSPSSDALEAQDIILPIKRGATQMLIRWFNKPDGDVLRWELSRRVFKYGTDFRGDNDGSWILCSRDIPGLREGESTFRCKGLMPGTEYQFRLRAYSNGCWQASEESIVSSPFKTICSPPDAPPACPRARQLAS----DPLVVGGIV-DTGALLSADAEEPATSGIRKGDNRRDGXXXXXXXXVDGGGSVDAGRDAAFSRRTGAAAAAAAVVRGKTRAEEDFADT------GRDVNDCADVGSESRYDGDSSDSDGDDRRTET---HGDQGAGEGVVMVACKSTVNGEGRAEVMGLEVEDRDTRVPTSRDDEERIRRRTHEATSQEEEQDEVGMEQTGVRGVRLSNEAESIRESPSLPALSCDAATKRNHTELEEGKSREDESVEGFAKTTKLGSSA-STTMVLEWDAGCTNGSVTTNYEVWGVADSTQGQDKTSGSGKWTLVALTEAAPTATLSGLREVCKSLCNPPLVSTRQAQPYRFKVRARNGLGWSEFGPPTPPVVLNPLRPCEAPELVDRGITWLALKLRAPPGAGLLLGFEMHMCRWAPGMSEGEETWSLV------VDSQREEXXXXXXXXXXXXXXXXXXXXXXXXXREESRMVWDLKPGAGYRFKARARTVIGWSPGGPVSDVYNTARRF 1258
BLAST of mRNA_M-pyrifera_M_contig14059.6157.1 vs. uniprot
Match: A0A7S1XYK0_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XYK0_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 1.110e-14 Identity = 70/234 (29.91%), Postives = 100/234 (42.74%), Query Frame = 1
Query: 1576 GLPDAGASAWSTLMV-LEWDGGCTNGAITTNYEVWGMADAFQGETGGGGEWRHVATTEAAPTVTLSGLRQAQPYRFKVRAQNALGWSDFGPPTAPLVLNPLRPCVAPELVDRGVTWLSLRLRAPPGAGLVLGFELQMC------RWE--PGMS------------EGEEAWATISGGGGGVGSSSKITTREE--SYVAWDLRPGAGYRFKARARTVFGWSPEGHASEIISTVRR 2208
GLP + S S + L W NGAI Y++W D G W +++ T + L YRF+VRA+N +GWS+FG + + N + P PE+V G +W+ L+ P +V FE+ M W+ P M+ EG ++ GG + R E S DL+ Y+FK R T FGWSP G S++I RR
Sbjct: 813 GLPSSDLSLCSGESIFLTWAASKPNGAIVDLYDIWASTDF--------GPWEQMSSC-IHNTADVPHLNSGSQYRFRVRARNDVGWSEFGEESEVVTTNSIAPPGRPEIVAMGGSWVQLKWVQPASVNVVDVFEVYMLVTGTEEYWDYAPAMAVPAAMVDANAAAEGGDSSHAEGAEGGQYQYQWQAVARVEGTSCTVPDLKSSFRYKFKIRCATAFGWSPFGADSDVIKLPRR 1037
BLAST of mRNA_M-pyrifera_M_contig14059.6157.1 vs. uniprot
Match: A0A485LQX9_9STRA (Aste57867_23950 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LQX9_9STRA) HSP 1 Score: 57.8 bits (138), Expect = 7.610e-5 Identity = 49/160 (30.63%), Postives = 67/160 (41.88%), Query Frame = 1
Query: 1765 LSGLRQAQPYRFKVRAQNALGWSDFGPPTAPLVLNPLRPCVAPELVDRGVTWLSLRLRAPP-----GAGLVLGFELQMCRWEPGMSEG------EEAWATISGGGGGVGSSSKITTREESYVAWDLRPGAGYRFKARARTVF-GWSPEGHASEIISTVRR 2208
+ GLR PYRF++RA+NALGWS+ GPP+ + P P + L LR P A FEL MCR + +EAW + +K R + V +L Y F+ R+ GW+ AS I T+RR
Sbjct: 666 VDGLRHGTPYRFRLRARNALGWSEPGPPSGAFFTHAFLPPTPPTSTSKTHYSLDLRWEDDPTDVNSAADQKTFFELHMCRLKTYCPHDAIPTIEQEAWDVVH---------AKCAAR--ACVVSNLSALTWYCFRVRSWIRHRGWTEFSDASVPIQTLRR 814 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig14059.6157.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig14059.6157.1 >prot_M-pyrifera_M_contig14059.6157.1 ID=prot_M-pyrifera_M_contig14059.6157.1|Name=mRNA_M-pyrifera_M_contig14059.6157.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=738bp SGAPIVRYEIQRLVLDENHPDWDAGRDQTTTGSSSFSNNNNNSTNERKSGback to top mRNA from alignment at M-pyrifera_M_contig14059:855..7253+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig14059.6157.1 ID=mRNA_M-pyrifera_M_contig14059.6157.1|Name=mRNA_M-pyrifera_M_contig14059.6157.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=6399bp|location=Sequence derived from alignment at M-pyrifera_M_contig14059:855..7253+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig14059:855..7253+ >mRNA_M-pyrifera_M_contig14059.6157.1 ID=mRNA_M-pyrifera_M_contig14059.6157.1|Name=mRNA_M-pyrifera_M_contig14059.6157.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=4428bp|location=Sequence derived from alignment at M-pyrifera_M_contig14059:855..7253+ (Macrocystis pyrifera P11B4 male)back to top |