mRNA_M-pyrifera_M_contig14015.6137.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig14015.6137.1
Unique NamemRNA_M-pyrifera_M_contig14015.6137.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig14015.6137.1 vs. uniprot
Match: D8LPJ6_ECTSI (EsV-1-176 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPJ6_ECTSI)

HSP 1 Score: 308 bits (790), Expect = 4.540e-103
Identity = 149/254 (58.66%), Postives = 198/254 (77.95%), Query Frame = 1
Query:    1 MKLPATAAPSTEFKNAQGSSVPREFALAARKNPDAVKEMAETPKEKLELEKEALARSYVLVVDRSGSMTTPDGTGTRWDSARKAVKQLVGKVLEVDLDGSVPLFLFDHEVESVGECTSPSQVLSVFDAHPPRRGTTSLAPCLETVLEKYAGNRRENYEVIPGLTVVVLLDGETDNNQAVRDVMKKYADPANGFCASHTEIGIAFVQIGDDDGATAFLKELDEGVMGSPDIASTSKDNQLFAPGGVEKCLYDAIF 762
            MKLPA A  STEF+NA+GS+VP+EFAL ARKNP+ + +MAE+P EK +LEKEALAR YVL++DRSGSM+ PDG  TRW+SARKAV+++V  V + D+DGS+PL+LFD +VE VGECT+  Q++SVF+ + PR G T LA CL+  ++ Y G  R N+E +PG T +V+LDG+ D+ QAV+DV++KYADPA+GF  +HT   I+FVQI DD GATAFLK+LD+G++G+PDI     DN L    GV++ L+DAIF
Sbjct:    1 MKLPAAAPASTEFRNAEGSTVPKEFALEARKNPEVISQMAESPSEKRDLEKEALARQYVLIIDRSGSMSWPDGKTTRWESARKAVEKIVESVFKYDIDGSIPLYLFDDQVEFVGECTNSGQIVSVFNDYQPR-GRTDLAKCLDVAMKTYLGKNRINFETVPGTTFLVILDGDADDRQAVKDVIRKYADPASGFVENHTNAAISFVQIADDPGATAFLKDLDDGIIGTPDICDFKVDNFLSEKDGVDRLLFDAIF 253          
BLAST of mRNA_M-pyrifera_M_contig14015.6137.1 vs. uniprot
Match: Q8QNB1_ESV1K (EsV-1-176 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNB1_ESV1K)

HSP 1 Score: 304 bits (779), Expect = 2.130e-101
Identity = 153/254 (60.24%), Postives = 193/254 (75.98%), Query Frame = 1
Query:    1 MKLPATAAPSTEFKNAQGSSVPREFALAARKNPDAVKEMAETPKEKLELEKEALARSYVLVVDRSGSMTTPDGTGTRWDSARKAVKQLVGKVLEVDLDGSVPLFLFDHEVESVGECTSPSQVLSVFDAHPPRRGTTSLAPCLETVLEKYAGNRRENYEVIPGLTVVVLLDGETDNNQAVRDVMKKYADPANGFCASHTEIGIAFVQIGDDDGATAFLKELDEGVMGSPDIASTSKDNQLFAPGGVEKCLYDAIF 762
            MKLPA A  STEF+NA+GSSVP+EFAL ARKNP+ + +MAETP EK  LEKEALAR YVL++DRSGSM   DG+ TRW+SARKAV++LV      D D  VP++LFD +VE VGECTS SQV+ VF  + PR GTT LA CLE  +E+YAG +R NYEV PG T +V+LDG  D+  AV+ V++K++DP +G+ A+HT++ I+F+QI DD GATAFL ELD G +GSPDI  T KD+ L  PGG++K  +DAIF
Sbjct:    1 MKLPAAAPASTEFRNAEGSSVPKEFALEARKNPEVISQMAETPSEKSALEKEALARQYVLLIDRSGSMGWADGSTTRWESARKAVEKLVEAAFIYDTDHRVPVYLFDDKVEFVGECTSSSQVVDVFKNYQPR-GTTDLAQCLEVAMEEYAGRKRPNYEVCPGTTFIVVLDGCADDKDAVKRVLRKFSDPVSGYVANHTQLAISFLQIADDPGATAFLNELDRGFVGSPDIVDTKKDDILSLPGGIDKLFHDAIF 253          
BLAST of mRNA_M-pyrifera_M_contig14015.6137.1 vs. uniprot
Match: A0A835ZEJ5_9STRA (VWFA domain-containing protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEJ5_9STRA)

HSP 1 Score: 277 bits (709), Expect = 8.780e-91
Identity = 145/255 (56.86%), Postives = 182/255 (71.37%), Query Frame = 1
Query:    1 MKLPATAAPSTEFKNAQGSSVPREFALAARKNPDAVKEMAETPKEKLELEKEALARSYVLVVDRSGSMTTPDGTG-TRWDSARKAVKQLVGKVLEVDLDGSVPLFLFDHEVESVGECTSPSQVLSVFDAHPPRRGTTSLAPCLETVLEKYAGNRRENYEVIPGLTVVVLLDGETDNNQAVRDVMKKYADPANGFCASHTEIGIAFVQIGDDDGATAFLKELDEGVMGSPDIASTSKDNQLFAPGGVEKCLYDAIF 762
            MKLP TA PST F NAQGS VP+E+AL AR NPD +  MAETPKEK++L+KEAL R YVL+VDRSGSM+ PDG+G TRWDSA  A++++V  + + D+D  VPL+LFD EV  VGE TSP+QV  +F    PR G+T L   L   L  YAG +R NYEV+PG T +VLLDG  D+ +AV   +K +ADPAN F A+HT+I I+FVQIGDD  A  FLK LD+     PDI  T KD+ L+  GG+++ L+DAIF
Sbjct:    1 MKLPPTAPPSTMFVNAQGSDVPKEYALPARSNPDLIVTMAETPKEKMDLQKEALVRQYVLIVDRSGSMSNPDGSGRTRWDSAGAAIEKMVDTIFQYDVDHQVPLYLFDSEVIFVGELTSPAQVRQIFKEFKPR-GSTGLDKALHEALSTYAGTKRPNYEVVPGTTFIVLLDGGADDEEAVLRTIKYFADPANRFIANHTQIAISFVQIGDDPNAERFLKRLDD--TSDPDICDTKKDDILYQAGGLDRLLFDAIF 252          
BLAST of mRNA_M-pyrifera_M_contig14015.6137.1 vs. uniprot
Match: A0A835YYE7_9STRA (VWFA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYE7_9STRA)

HSP 1 Score: 270 bits (689), Expect = 9.200e-88
Identity = 138/254 (54.33%), Postives = 184/254 (72.44%), Query Frame = 1
Query:    1 MKLPATAAPSTEFKNAQGSSVPREFALAARKNPDAVKEMAETPKEKLELEKEALARSYVLVVDRSGSMTTPDGTGTRWDSARKAVKQLVGKVLEVDLDGSVPLFLFDHEVESVGECTSPSQVLSVFDAHPPRRGTTSLAPCLETVLEKYAGNRRENYEVIPGLTVVVLLDGETDNNQAVRDVMKKYADPANGFCASHTEIGIAFVQIGDDDGATAFLKELDEGVMGSPDIASTSKDNQLFAPGGVEKCLYDAIF 762
            MKLP  A P+  F NA+GSSVP+EFA+AAR NPD + +MAET KE  +L +EALAR YV++VD SGSM T DG GTRWDSAR AV+++V  + E D+D +VPL+LFD +V  VGE TSPSQV +VF    PR G+T L P L   L  YAG +R NYE++PG T +VLLDG  D+   V  V++++ADP +G+ ++HT++ ++F+QIGDD GA+AFLK LD+G+  +PDI    KD+ L   GG++  LY+AIF
Sbjct:    1 MKLPPCAPPAMHFINAKGSSVPKEFAIAARTNPDMIPQMAETSKESKDLHREALARQYVVIVDMSGSMATRDGRGTRWDSARVAVEKMVDTIFEYDVDHTVPLYLFDSQVTFVGELTSPSQVKAVFKEFGPR-GSTGLGPALREALGTYAGTKRPNYELVPGTTFIVLLDGGADDEGEVTRVLQEFADPKSGYVSNHTQLAVSFIQIGDDAGASAFLKRLDDGI--TPDICDFVKDDILSQSGGLDTLLYNAIF 251          
BLAST of mRNA_M-pyrifera_M_contig14015.6137.1 vs. uniprot
Match: A0A836CHH8_9STRA (VWFA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHH8_9STRA)

HSP 1 Score: 265 bits (676), Expect = 8.630e-86
Identity = 134/254 (52.76%), Postives = 180/254 (70.87%), Query Frame = 1
Query:    1 MKLPATAAPSTEFKNAQGSSVPREFALAARKNPDAVKEMAETPKEKLELEKEALARSYVLVVDRSGSMTTPDGTGTRWDSARKAVKQLVGKVLEVDLDGSVPLFLFDHEVESVGECTSPSQVLSVFDAHPPRRGTTSLAPCLETVLEKYAGNRRENYEVIPGLTVVVLLDGETDNNQAVRDVMKKYADPANGFCASHTEIGIAFVQIGDDDGATAFLKELDEGVMGSPDIASTSKDNQLFAPGGVEKCLYDAIF 762
            MKLP+  AP T+F NAQGS VP+E+A+AAR +PD +K+MAET  E  +L+KEALAR YV++VDRSGSM   DG GTRWDSAR AV +++  + + D+D +VP+++FD+E   +GE T  SQV  +F    PR GTT L   L   +E YAG +R NY +IPG T +VLLDG  D+ +AV   ++ +ADP NG+ A+HT+I ++F+QIGDD GAT FLK LD+ +   PDI  T KD+ L   GG+++ LYDAIF
Sbjct:    1 MKLPSAPAPRTQFVNAQGSHVPQEYAIAARADPDCIKDMAETSNELKDLQKEALARQYVIIVDRSGSMAASDGRGTRWDSARDAVAKMIDTIFKYDVDHTVPVYVFDNESVFIGEVTKASQVKQIFTEFKPR-GTTDLNNVLVEAIETYAGTKRPNYSLIPGTTFIVLLDGGADDEEAVMRSLRHFADPRNGYVANHTQIALSFLQIGDDAGATRFLKRLDDEI--EPDICDTKKDDVLKTSGGLDQLLYDAIF 251          
BLAST of mRNA_M-pyrifera_M_contig14015.6137.1 vs. uniprot
Match: A0A835YR58_9STRA (VWFA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR58_9STRA)

HSP 1 Score: 265 bits (676), Expect = 8.920e-86
Identity = 144/255 (56.47%), Postives = 174/255 (68.24%), Query Frame = 1
Query:    1 MKLPATAAPSTEFKNAQGSSVPREFALAARKNPDAVKEMAETPKEKLELEKEALARSYVLVVDRSGSMTTPDGTG-TRWDSARKAVKQLVGKVLEVDLDGSVPLFLFDHEVESVGECTSPSQVLSVFDAHPPRRGTTSLAPCLETVLEKYAGNRRENYEVIPGLTVVVLLDGETDNNQAVRDVMKKYADPANGFCASHTEIGIAFVQIGDDDGATAFLKELDEGVMGSPDIASTSKDNQLFAPGGVEKCLYDAIF 762
            MKLP  AA ST F NAQGS VP+EFAL AR NPD +  MAETPKEK  L++EAL R YVL+VDRSGSM  PD  G TRWDSA  AV+ +V  + + D D  VPL+LFD EV SVGE TSPSQV  VF  + PR G+T L   L   L  YAG +R NYEV+PG T +VLLDG  D+ + V   ++ +ADPAN F A+HT+I ++FVQIGDD  A  FL  LDE     PDI  T KD+ L+  GG+++ L+DAIF
Sbjct:    1 MKLPPAAALSTMFVNAQGSDVPKEFALPARSNPDLIATMAETPKEKTTLQREALIRQYVLIVDRSGSMAAPDRNGRTRWDSAGVAVENMVDTIFKYDNDHQVPLYLFDSEVTSVGELTSPSQVKQVFREYRPR-GSTGLDKALHEALNTYAGTKRPNYEVVPGTTFIVLLDGSADDEEPVMRTIRYFADPANKFIANHTQIALSFVQIGDDPNAERFLNCLDE--TAEPDICDTKKDDILYQAGGLDRLLHDAIF 252          
BLAST of mRNA_M-pyrifera_M_contig14015.6137.1 vs. uniprot
Match: A0A836CG78_9STRA (VWFA domain-containing protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG78_9STRA)

HSP 1 Score: 259 bits (661), Expect = 1.620e-83
Identity = 132/254 (51.97%), Postives = 179/254 (70.47%), Query Frame = 1
Query:    1 MKLPATAAPSTEFKNAQGSSVPREFALAARKNPDAVKEMAETPKEKLELEKEALARSYVLVVDRSGSMTTPDGTGTRWDSARKAVKQLVGKVLEVDLDGSVPLFLFDHEVESVGECTSPSQVLSVFDAHPPRRGTTSLAPCLETVLEKYAGNRRENYEVIPGLTVVVLLDGETDNNQAVRDVMKKYADPANGFCASHTEIGIAFVQIGDDDGATAFLKELDEGVMGSPDIASTSKDNQLFAPGGVEKCLYDAIF 762
            MKLP  A P+  F NA+GS+VP+EFA+AAR NPD + +MAETPKE   L+KEALAR YV++VD SGSM   DG GTRWDSAR AV+++V  +   D+D +VPL+LFD EV  +GE T  SQV +VF    PR GTT L   L   L  YAG +R NY+++PG T +VLLDG  D+   V  V++++ADP NG+  +HT+I ++FVQ+GDD  A+AFL++LD+ +  +PDI    +D+ L   GG+++ L+DAIF
Sbjct:    1 MKLPPVAPPAMHFINAKGSNVPQEFAIAARANPDVIPQMAETPKELQALQKEALARQYVIIVDMSGSMAARDGKGTRWDSARSAVEKMVDTIFAYDVDHTVPLYLFDSEVTFIGELTKASQVKAVFKEFGPR-GTTGLGAALREALSTYAGTKRPNYQLVPGTTFIVLLDGGADDEADVMRVLQEFADPRNGYIENHTQIALSFVQVGDDASASAFLQKLDDSI--TPDICDFKRDDILTQLGGLDRLLHDAIF 251          
BLAST of mRNA_M-pyrifera_M_contig14015.6137.1 vs. uniprot
Match: A0A835Z7E0_9STRA (VWFA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7E0_9STRA)

HSP 1 Score: 258 bits (658), Expect = 4.630e-83
Identity = 134/254 (52.76%), Postives = 175/254 (68.90%), Query Frame = 1
Query:    1 MKLPATAAPSTEFKNAQGSSVPREFALAARKNPDAVKEMAETPKEKLELEKEALARSYVLVVDRSGSMTTPDGTGTRWDSARKAVKQLVGKVLEVDLDGSVPLFLFDHEVESVGECTSPSQVLSVFDAHPPRRGTTSLAPCLETVLEKYAGNRRENYEVIPGLTVVVLLDGETDNNQAVRDVMKKYADPANGFCASHTEIGIAFVQIGDDDGATAFLKELDEGVMGSPDIASTSKDNQLFAPGGVEKCLYDAIF 762
            MKLP  +APST F NA+GS+V +E+A+AAR NPD +  MAETP+E  +L+KEALAR YV++VDRSGSM   DG GT WDSAR AV +++  VL  D+D +VP+++FD+E   +GE T  SQV  +F    PR GTT L   L   LE YAG +R NYE++PG T +VLLDG  D+  AV   + ++ADP NG+ A+HT+I I+  QIGDD  AT FLK LD+ +   PDI  T KD+ L   GG+++ LY AIF
Sbjct:    1 MKLPPPSAPSTTFVNAKGSNVIQEYAIAARANPDCIPTMAETPRELKDLQKEALARQYVIIVDRSGSMGAADGRGTHWDSARDAVTRMIDTVLNYDIDHTVPVYIFDNECVFIGEVTKASQVKQIFTEFKPR-GTTDLNNVLVEALETYAGTKRPNYELVPGTTFIVLLDGGADDEDAVMKTVCRFADPRNGYVANHTQIAISLCQIGDDPSATRFLKRLDDEI--EPDICDTQKDDILSETGGLDRLLYSAIF 251          
BLAST of mRNA_M-pyrifera_M_contig14015.6137.1 vs. uniprot
Match: A0A835YW67_9STRA (VWFA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW67_9STRA)

HSP 1 Score: 252 bits (643), Expect = 7.890e-81
Identity = 141/250 (56.40%), Postives = 177/250 (70.80%), Query Frame = 1
Query:    1 MKLPATAAPSTEFKNAQGSSVPREFALAARKNPDAVKEMAETPKEKLELEKEALARSYVLVVDRSGSMTTPDGTG-TRWDSARKAVKQLVGKVLEVDLDGSVPLFLFDHEVESVGECTSPSQVLSVFDAHPPRRGTTSLAPCLETVLEKYAGNRRENYEVIPGLTVVVLLDGETDNNQAVRDVMKKYADPANGFCASHTEIGIA--FVQIGDDDGATAFLKELDEGVMGSPDIASTSKDNQLFAPGGVEK 741
            MKLP TA PST F NAQGS VP+E+AL AR NPD +  MAETPKEK++L++EAL R YVL+V+RSGSM  PDG+G TRWDSA  AV+++V  + + D+D +VPL++FD EV  VGE TSP+QV  VF    PR G+T L   L   L  YAG +R NYEV+PG T +VLLDG  D+ +AVR + + +ADPAN F A+HT+I IA  FVQIGDD  A  FLK LD+ V   PDI  T KD+ L+  GG+ +
Sbjct:    1 MKLPPTAPPSTLFVNAQGSDVPKEYALPARANPDLIVSMAETPKEKMDLQREALDRQYVLIVERSGSMFNPDGSGKTRWDSAGAAVEKMVDTIFDYDVDHTVPLYVFDSEVIFVGELTSPAQVKQVFREFGPR-GSTGLDKGLHEALSTYAGTKRPNYEVVPGTTFIVLLDGGADDEEAVRTI-RYFADPANRFIANHTQIQIAISFVQIGDDTNAERFLKRLDDTV--EPDIFDTKKDDILYQAGGLRQ 246          
BLAST of mRNA_M-pyrifera_M_contig14015.6137.1 vs. uniprot
Match: B5LWN6_9PHYC (Putative von Willebrand factor n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWN6_9PHYC)

HSP 1 Score: 249 bits (635), Expect = 1.470e-79
Identity = 135/256 (52.73%), Postives = 180/256 (70.31%), Query Frame = 1
Query:    1 MKLPATAAPSTEFKNAQGSSVPREFALAARKNPDAVKEMAETPKEKLELEKEALARSYVLVVDRSGSMTTPDGTG-TRWDSARKAVKQLVGKVLEVDLDGSVPLFLFDHEVESVGECTSPSQVLSVFDAHPPRRGTTSLAPCLETVLEKYAGNRRENYEVIPGLTVVVLLDGETDNNQAVRDVMKKYADPANGFCASHTEIGIAFVQIGDDDGATAFLKELDEGVMGSPDIASTSKDNQLFAP-GGVEKCLYDAIF 762
            MKLP + A ST F NA+GS+VP+EFALAAR NP+ + +MAE+  E   LEKEAL R +VL++DRSGSM  PDG   TRW+ A++  K LV  + + D+D S+PLFLFD EV  VGECT+ SQ+ +VF  + P   TT+L+  LE  +E Y G++R NYEV+PG T +VLLDG  DN   V  V++KYADPANG+ ++HT+  ++FVQI DD  AT FL+ LDE  +   DI  T KD+ +F+  GGV+K L+DA+F
Sbjct:    1 MKLPVSEA-STTFANAEGSAVPKEFALAARSNPEQIPQMAESAAETKMLEKEALVRQFVLLIDRSGSMGWPDGDDKTRWERAKEVTKALVPSLFKYDVDKSIPLFLFDSEVSFVGECTNASQIETVFTEYQPGT-TTNLSGALEQAMEMYLGSKRVNYEVVPGTTFIVLLDGGADNPDEVVQVLQKYADPANGYISNHTQAAVSFVQIADDISATMFLRSLDE--LKPLDIVDTKKDDFIFSTDGGVDKLLHDAVF 252          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig14015.6137.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LPJ6_ECTSI4.540e-10358.66EsV-1-176 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
Q8QNB1_ESV1K2.130e-10160.24EsV-1-176 n=1 Tax=Ectocarpus siliculosus virus 1 (... [more]
A0A835ZEJ5_9STRA8.780e-9156.86VWFA domain-containing protein n=2 Tax=Tribonema m... [more]
A0A835YYE7_9STRA9.200e-8854.33VWFA domain-containing protein n=1 Tax=Tribonema m... [more]
A0A836CHH8_9STRA8.630e-8652.76VWFA domain-containing protein n=1 Tax=Tribonema m... [more]
A0A835YR58_9STRA8.920e-8656.47VWFA domain-containing protein n=1 Tax=Tribonema m... [more]
A0A836CG78_9STRA1.620e-8351.97VWFA domain-containing protein n=2 Tax=Tribonema m... [more]
A0A835Z7E0_9STRA4.630e-8352.76VWFA domain-containing protein n=1 Tax=Tribonema m... [more]
A0A835YW67_9STRA7.890e-8156.40VWFA domain-containing protein n=1 Tax=Tribonema m... [more]
B5LWN6_9PHYC1.470e-7952.73Putative von Willebrand factor n=1 Tax=Feldmannia ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig14015contigM-pyrifera_M_contig14015:1433..2200 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score96.7
Seed ortholog evalue1.7e-17
Seed eggNOG ortholog56110.Oscil6304_2719
KEGG koko:K07114
KEGG TC1.A.13.2.2,1.A.13.2.3
Hectar predicted targeting categoryother localisation
EggNOG free text desc.von Willebrand factor, type A
EggNOG OGs1G11R@1117,1H7TP@1150,COG2304@1,COG2304@2
COG Functional cat.S
Best tax levelOscillatoriales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000
Exons1
Model size768
Cds size768
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815832.7131243-CDS-M-pyrifera_M_contig14015:1432..22001622815832.7131243-CDS-M-pyrifera_M_contig14015:1432..2200Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig14015 1433..2200 -
1692277595.6399217-CDS-M-pyrifera_M_contig14015:1432..22001692277595.6399217-CDS-M-pyrifera_M_contig14015:1432..2200Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig14015 1433..2200 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig14015.6137.1prot_M-pyrifera_M_contig14015.6137.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig14015 1433..2200 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig14015.6137.1

>prot_M-pyrifera_M_contig14015.6137.1 ID=prot_M-pyrifera_M_contig14015.6137.1|Name=mRNA_M-pyrifera_M_contig14015.6137.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=256bp
MKLPATAAPSTEFKNAQGSSVPREFALAARKNPDAVKEMAETPKEKLELE
KEALARSYVLVVDRSGSMTTPDGTGTRWDSARKAVKQLVGKVLEVDLDGS
VPLFLFDHEVESVGECTSPSQVLSVFDAHPPRRGTTSLAPCLETVLEKYA
GNRRENYEVIPGLTVVVLLDGETDNNQAVRDVMKKYADPANGFCASHTEI
GIAFVQIGDDDGATAFLKELDEGVMGSPDIASTSKDNQLFAPGGVEKCLY
DAIFA*
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mRNA from alignment at M-pyrifera_M_contig14015:1433..2200-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig14015.6137.1 ID=mRNA_M-pyrifera_M_contig14015.6137.1|Name=mRNA_M-pyrifera_M_contig14015.6137.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=768bp|location=Sequence derived from alignment at M-pyrifera_M_contig14015:1433..2200- (Macrocystis pyrifera P11B4 male)
ATGAAGCTTCCCGCCACTGCCGCTCCTTCCACCGAGTTCAAGAACGCCCA AGGCTCATCCGTGCCGAGGGAGTTTGCTCTTGCGGCTCGCAAGAATCCTG ATGCCGTCAAAGAGATGGCCGAGACGCCCAAGGAGAAGCTCGAGCTCGAA AAAGAAGCGCTGGCCAGGAGTTATGTTCTCGTTGTTGATAGGTCGGGCTC CATGACAACGCCGGACGGCACCGGTACCCGCTGGGACTCGGCCAGGAAGG CCGTTAAGCAACTTGTTGGCAAGGTCTTGGAGGTGGATTTGGACGGAAGT GTACCGCTTTTCTTGTTTGACCACGAGGTAGAGTCTGTAGGCGAGTGCAC TAGCCCATCTCAGGTGCTTTCTGTTTTCGACGCTCACCCGCCTCGTCGCG GCACTACCAGTCTGGCACCGTGCCTCGAGACTGTATTGGAGAAGTACGCA GGAAACCGTAGGGAGAACTATGAAGTAATCCCTGGACTGACAGTGGTCGT GTTGCTCGATGGAGAAACAGATAACAACCAGGCTGTGAGGGATGTGATGA AGAAGTACGCCGACCCAGCGAATGGATTTTGTGCCTCGCACACGGAGATC GGTATCGCGTTTGTGCAAATCGGGGACGATGATGGGGCAACGGCATTCCT TAAAGAGCTTGATGAAGGTGTAATGGGGTCTCCTGATATAGCTAGCACGT CAAAAGACAACCAGCTGTTCGCACCGGGAGGCGTCGAGAAATGCCTATAT GATGCCATATTTGCGTAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig14015:1433..2200-

>mRNA_M-pyrifera_M_contig14015.6137.1 ID=mRNA_M-pyrifera_M_contig14015.6137.1|Name=mRNA_M-pyrifera_M_contig14015.6137.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1536bp|location=Sequence derived from alignment at M-pyrifera_M_contig14015:1433..2200- (Macrocystis pyrifera P11B4 male)
ATGAAGCTTCCCGCCACTGCCGCTCCTTCCACCGAGTTCAAGAACGCCCA
AGGCTCATCCGTGCCGAGGGAGTTTGCTCTTGCGGCTCGCAAGAATCCTG
ATGCCGTCAAAGAGATGGCCGAGACGCCCAAGGAGAAGCTCGAGCTCGAA
AAAGAAGCGCTGGCCAGGAGTTATGTTCTCGTTGTTGATAGGTCGGGCTC
CATGACAACGCCGGACGGCACCGGTACCCGCTGGGACTCGGCCAGGAAGG
CCGTTAAGCAACTTGTTGGCAAGGTCTTGGAGGTGGATTTGGACGGAAGT
GTACCGCTTTTCTTGTTTGACCACGAGGTAGAGTCTGTAGGCGAGTGCAC
TAGCCCATCTCAGGTGCTTTCTGTTTTCGACGCTCACCCGCCTCGTCGCG
GCACTACCAGTCTGGCACCGTGCCTCGAGACTGTATTGGAGAAGTACGCA
GGAAACCGTAGGGAGAACTATGAAGTAATCCCTGGACTGACAGTGGTCGT
GTTGCTCGATGGAGAAACAGATAACAACCAGGCTGTGAGGGATGTGATGA
AGAAGTACGCCGACCCAGCGAATGGATTTTGTGCCTCGCACACGGAGATC
GGTATCGCGTTTGTGCAAATCGGGGACGATGATGGGGCAACGGCATTCCT
TAAAGAGCTTGATGAAGGTGTAATGGGGTCTCCTGATATAGCTAGCACGT
CAAAAGACAACCAGCTGTTCGCACCGGGAGGCGTCGAGAAATGCCTATAT
GATGCCATATTTGCGTAAATGAAGCTTCCCGCCACTGCCGCTCCTTCCAC
CGAGTTCAAGAACGCCCAAGGCTCATCCGTGCCGAGGGAGTTTGCTCTTG
CGGCTCGCAAGAATCCTGATGCCGTCAAAGAGATGGCCGAGACGCCCAAG
GAGAAGCTCGAGCTCGAAAAAGAAGCGCTGGCCAGGAGTTATGTTCTCGT
TGTTGATAGGTCGGGCTCCATGACAACGCCGGACGGCACCGGTACCCGCT
GGGACTCGGCCAGGAAGGCCGTTAAGCAACTTGTTGGCAAGGTCTTGGAG
GTGGATTTGGACGGAAGTGTACCGCTTTTCTTGTTTGACCACGAGGTAGA
GTCTGTAGGCGAGTGCACTAGCCCATCTCAGGTGCTTTCTGTTTTCGACG
CTCACCCGCCTCGTCGCGGCACTACCAGTCTGGCACCGTGCCTCGAGACT
GTATTGGAGAAGTACGCAGGAAACCGTAGGGAGAACTATGAAGTAATCCC
TGGACTGACAGTGGTCGTGTTGCTCGATGGAGAAACAGATAACAACCAGG
CTGTGAGGGATGTGATGAAGAAGTACGCCGACCCAGCGAATGGATTTTGT
GCCTCGCACACGGAGATCGGTATCGCGTTTGTGCAAATCGGGGACGATGA
TGGGGCAACGGCATTCCTTAAAGAGCTTGATGAAGGTGTAATGGGGTCTC
CTGATATAGCTAGCACGTCAAAAGACAACCAGCTGTTCGCACCGGGAGGC
GTCGAGAAATGCCTATATGATGCCATATTTGCGTAA
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