mRNA_M-pyrifera_M_contig13969.6125.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig13969.6125.1 vs. uniprot
Match: UPI00077D09EE (zinc finger BED domain-containing protein 1-like n=1 Tax=Nothobranchius furzeri TaxID=105023 RepID=UPI00077D09EE) HSP 1 Score: 83.6 bits (205), Expect = 3.820e-18 Identity = 40/64 (62.50%), Postives = 49/64 (76.56%), Query Frame = 1
Query: 1 PLMWWKQTEEMYPTLAQMARKYLAIPASSAASERLFSVAGNTITEKRASLTDENAENLIFLHSN 192
PL WWK +PTLA +A+ YLA+PA+ A SERLFSVAGN +T+KRASLT E+ E L FLH+N
Sbjct: 164 PLTWWKNNATRFPTLATLAKSYLAVPATWAPSERLFSVAGNIVTKKRASLTAEHVETLTFLHTN 227
BLAST of mRNA_M-pyrifera_M_contig13969.6125.1 vs. uniprot
Match: A0A8B8G1F8_9HEMI (zinc finger BED domain-containing protein 1-like n=4 Tax=Aphididae TaxID=27482 RepID=A0A8B8G1F8_9HEMI) HSP 1 Score: 80.9 bits (198), Expect = 7.230e-18 Identity = 37/68 (54.41%), Postives = 51/68 (75.00%), Query Frame = 1
Query: 1 PLMWWKQTEEMYPTLAQMARKYLAIPASSAASERLFSVAGNTITEKRASLTDENAENLIFLHSNQHLW 204
PL WW+ EE YP +A +A+KYLAIP++SA+SER FS AGN +T KR+ L EN + L+FL+ N+ L+
Sbjct: 77 PLEWWRTREEKYPAIATIAKKYLAIPSTSASSERCFSTAGNIVTPKRSCLLPENVDMLVFLYQNRKLY 144
BLAST of mRNA_M-pyrifera_M_contig13969.6125.1 vs. uniprot
Match: A0A669CH32_ORENI (BED-type domain-containing protein n=4 Tax=Ovalentaria TaxID=1489908 RepID=A0A669CH32_ORENI) HSP 1 Score: 85.5 bits (210), Expect = 7.260e-18 Identity = 41/64 (64.06%), Postives = 49/64 (76.56%), Query Frame = 1
Query: 1 PLMWWKQTEEMYPTLAQMARKYLAIPASSAASERLFSVAGNTITEKRASLTDENAENLIFLHSN 192
PL WWK +PTLA +A+ YLA+PA+S SERLFSVAGN +T+KRASLT E+ E L FLHSN
Sbjct: 563 PLTWWKNNATRFPTLANLAKSYLAVPATSTPSERLFSVAGNIVTKKRASLTAEHVEMLTFLHSN 626
BLAST of mRNA_M-pyrifera_M_contig13969.6125.1 vs. uniprot
Match: A0A1A8UYZ5_NOTFU (Uncharacterized protein (Fragment) n=1 Tax=Nothobranchius furzeri TaxID=105023 RepID=A0A1A8UYZ5_NOTFU) HSP 1 Score: 84.0 bits (206), Expect = 2.220e-17 Identity = 40/64 (62.50%), Postives = 49/64 (76.56%), Query Frame = 1
Query: 1 PLMWWKQTEEMYPTLAQMARKYLAIPASSAASERLFSVAGNTITEKRASLTDENAENLIFLHSN 192
PL WWK +PTLA +A+ YLA+PA+S SERLFSVAGN +T+KRASLT E+ E L FLH+N
Sbjct: 388 PLTWWKNNATRFPTLATLAKSYLAVPATSTPSERLFSVAGNIVTKKRASLTAEHVEMLTFLHTN 451
BLAST of mRNA_M-pyrifera_M_contig13969.6125.1 vs. uniprot
Match: A0A0F8D3X4_LARCR (Zinc finger BED domain-containing protein 1 n=1 Tax=Larimichthys crocea TaxID=215358 RepID=A0A0F8D3X4_LARCR) HSP 1 Score: 77.8 bits (190), Expect = 2.380e-17 Identity = 35/65 (53.85%), Postives = 49/65 (75.38%), Query Frame = 1
Query: 1 PLMWWKQTEEMYPTLAQMARKYLAIPASSAASERLFSVAGNTITEKRASLTDENAENLIFLHSNQ 195
PL WW Q E+ +P LA++ + YLA+PA+S SER+FS+ GNTIT +RASL + + L+FLH+NQ
Sbjct: 4 PLHWWAQNEDRFPRLAKLCKHYLAVPATSTPSERIFSLTGNTITRQRASLHPAHVDVLVFLHANQ 68
BLAST of mRNA_M-pyrifera_M_contig13969.6125.1 vs. uniprot
Match: UPI001C05103D (zinc finger BED domain-containing protein 4-like n=1 Tax=Melanotaenia boesemani TaxID=1250792 RepID=UPI001C05103D) HSP 1 Score: 79.3 bits (194), Expect = 7.300e-17 Identity = 35/65 (53.85%), Postives = 50/65 (76.92%), Query Frame = 1
Query: 1 PLMWWKQTEEMYPTLAQMARKYLAIPASSAASERLFSVAGNTITEKRASLTDENAENLIFLHSNQ 195
PL WW Q + +P LA++ ++YLA+PA+S SER+FS+AGNTIT +RASL + + L+FLH+NQ
Sbjct: 107 PLQWWAQNVDRFPRLAKLCKRYLAVPATSTPSERIFSLAGNTITRQRASLHQAHVDALVFLHANQ 171
BLAST of mRNA_M-pyrifera_M_contig13969.6125.1 vs. uniprot
Match: UPI000B937505 (zinc finger BED domain-containing protein 1-like n=2 Tax=Aphidinae TaxID=133076 RepID=UPI000B937505) HSP 1 Score: 78.2 bits (191), Expect = 9.260e-17 Identity = 36/67 (53.73%), Postives = 46/67 (68.66%), Query Frame = 1
Query: 1 PLMWWKQTEEMYPTLAQMARKYLAIPASSAASERLFSVAGNTITEKRASLTDENAENLIFLHSNQHL 201
P WWK YP + +A+KYL IPA+S +SER FS AGN +T KRASL+ EN L+FLH N++L
Sbjct: 59 PKEWWKTRFSKYPVIGDLAKKYLTIPATSVSSERCFSTAGNIVTRKRASLSPENVNMLVFLHQNKYL 125
BLAST of mRNA_M-pyrifera_M_contig13969.6125.1 vs. uniprot
Match: UPI001939731D (zinc finger BED domain-containing protein 4-like n=1 Tax=Styela clava TaxID=7725 RepID=UPI001939731D) HSP 1 Score: 81.6 bits (200), Expect = 1.130e-16 Identity = 36/68 (52.94%), Postives = 53/68 (77.94%), Query Frame = 1
Query: 1 PLMWWKQTEEMYPTLAQMARKYLAIPASSAASERLFSVAGNTITEKRASLTDENAENLIFLHSNQHLW 204
PL+WWK+ E ++P L ++ ++YL IPA+S SER+FSVAGNT TE ++SLT + E L+FL +N++LW
Sbjct: 308 PLIWWKENENLFPNLVKLVQEYLGIPATSMPSERVFSVAGNTATELKSSLTGFHVEALVFLKANKNLW 375
BLAST of mRNA_M-pyrifera_M_contig13969.6125.1 vs. uniprot
Match: A0A6P8TVQ2_GYMAC (zinc finger BED domain-containing protein 1-like n=2 Tax=Notothenioidei TaxID=8205 RepID=A0A6P8TVQ2_GYMAC) HSP 1 Score: 82.0 bits (201), Expect = 1.200e-16 Identity = 39/64 (60.94%), Postives = 49/64 (76.56%), Query Frame = 1
Query: 1 PLMWWKQTEEMYPTLAQMARKYLAIPASSAASERLFSVAGNTITEKRASLTDENAENLIFLHSN 192
PL WWK+ E +P+LA +AR YLA PA+S SERLFS AGN +++KRASLT E+ + L FLHSN
Sbjct: 540 PLQWWKENETKFPSLAVVARSYLAAPATSTPSERLFSAAGNIVSKKRASLTKEHVDMLTFLHSN 603
BLAST of mRNA_M-pyrifera_M_contig13969.6125.1 vs. uniprot
Match: E2BS40_HARSA (Zinc finger BED domain-containing protein 1 (Fragment) n=2 Tax=Harpegnathos saltator TaxID=610380 RepID=E2BS40_HARSA) HSP 1 Score: 74.3 bits (181), Expect = 4.080e-16 Identity = 37/68 (54.41%), Postives = 48/68 (70.59%), Query Frame = 1
Query: 1 PLMWWKQTEEMYPTLAQMARKYLAIPASSAASERLFSVAGNTITEKRASLTDENAENLIFLHSNQHLW 204
PL WWK E +YP +A + + YLAI ASSA+SER+FS AGN +T KR L+ EN LIFL+ N+ L+
Sbjct: 2 PLKWWKAHENLYPMIAALTKVYLAILASSASSERVFSTAGNIVTAKRNCLSTENVNLLIFLNKNKSLF 69 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig13969.6125.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig13969.6125.1 >prot_M-pyrifera_M_contig13969.6125.1 ID=prot_M-pyrifera_M_contig13969.6125.1|Name=mRNA_M-pyrifera_M_contig13969.6125.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=66bp MWWKQTEEMYPTLAQMARKYLAIPASSAASERLFSVAGNTITEKRASLTDback to top mRNA from alignment at M-pyrifera_M_contig13969:4293..4496+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig13969.6125.1 ID=mRNA_M-pyrifera_M_contig13969.6125.1|Name=mRNA_M-pyrifera_M_contig13969.6125.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=204bp|location=Sequence derived from alignment at M-pyrifera_M_contig13969:4293..4496+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig13969:4293..4496+ >mRNA_M-pyrifera_M_contig13969.6125.1 ID=mRNA_M-pyrifera_M_contig13969.6125.1|Name=mRNA_M-pyrifera_M_contig13969.6125.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=396bp|location=Sequence derived from alignment at M-pyrifera_M_contig13969:4293..4496+ (Macrocystis pyrifera P11B4 male)back to top |