mRNA_M-pyrifera_M_contig13969.6124.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig13969.6124.1 vs. uniprot
Match: UPI00177AFCD9 (zinc finger BED domain-containing protein 1-like n=1 Tax=Rhagoletis pomonella TaxID=28610 RepID=UPI00177AFCD9) HSP 1 Score: 67.4 bits (163), Expect = 1.200e-10 Identity = 48/123 (39.02%), Postives = 64/123 (52.03%), Query Frame = 1
Query: 25 SNFQCPGVKTMVECVAQKAREVHDLVAIKLLGQDVAL--TGDGWESRSGQSFYSLTAHV---GDPNTYELERHTLACRAMHDRHTGVNVCNLNQELLKEFGVRNGRITSFTSDTAANQKKAVR 378
SN++ P KT+ + V V + L + A+ T DGW SR+G SF+S+TAH D T+ L LAC + DRHT N+ E+ E+GV N +I SD AAN K AVR
Sbjct: 151 SNYKLPTRKTVSSSLIPAMYNVTMEVVKRRLERAYAICVTMDGWTSRAGDSFFSVTAHYIVEEDKKTF-LASDLLACSSYLDRHTSENITKKINEIFCEWGVSN-KICVIVSDNAANMKAAVR 271
BLAST of mRNA_M-pyrifera_M_contig13969.6124.1 vs. uniprot
Match: UPI001EE59B2A (E3 SUMO-protein ligase ZBED1-like n=1 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE59B2A) HSP 1 Score: 62.0 bits (149), Expect = 1.410e-8 Identity = 32/101 (31.68%), Postives = 57/101 (56.44%), Query Frame = 1
Query: 127 VALTGDGWESRSGQSFYSLTAHVGDPNTYELERHTLACRAMHDRHTGVNVCNLNQELLKEFGVRNGRITSFTSDTAANQKKAVRLMG-VPFIACACHVLEL 426
+A+T DGW SRS +S+ ++TAH + + ++LE L R +H+ HTG N+ N+ + + E+ + + ++D A+N AV+ P I C H + +
Sbjct: 194 MAVTTDGWTSRSTESYITITAHYVNED-WQLENPVLQTRTLHESHTGANLANVLESAVDEWNLGKFSQIAISTDNASNIVSAVKQSRFAPHIRCFAHTINI 293
BLAST of mRNA_M-pyrifera_M_contig13969.6124.1 vs. uniprot
Match: A0A1X6P5T6_PORUM (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P5T6_PORUM) HSP 1 Score: 62.4 bits (150), Expect = 1.440e-8 Identity = 35/99 (35.35%), Postives = 50/99 (50.51%), Query Frame = 1
Query: 133 LTGDGWESRSGQSFY-SLTAHVGDPNTYELERHTLACRAMHDRHTGVNVCNLNQELLKEFGVRNGRITSFTSDTAANQKKAVRLMGVPFIACACHVLEL 426
L D W R G Y SL DP T+ + L A RH N+ + + LL+ +GVRN ++S TSD+ +N KKA+ + ++ CA H L L
Sbjct: 444 LVTDLWTERHGSGSYGSLVLRCVDPGTFSIVELHLGVAAFIGRHDHDNIRSWTERLLRRYGVRNEDVSSSTSDSGSNVKKALTQLWPRWVPCAAHTLHL 542
BLAST of mRNA_M-pyrifera_M_contig13969.6124.1 vs. uniprot
Match: A0A1X6P1B6_PORUM (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P1B6_PORUM) HSP 1 Score: 61.6 bits (148), Expect = 2.620e-8 Identity = 33/96 (34.38%), Postives = 50/96 (52.08%), Query Frame = 1
Query: 142 DGWESRSGQSFY-SLTAHVGDPNTYELERHTLACRAMHDRHTGVNVCNLNQELLKEFGVRNGRITSFTSDTAANQKKAVRLMGVPFIACACHVLEL 426
D W R G Y SL DP T+ + L A++ RH N+ + + LL+ +GVR ++S TSD+ +N KKA+ + ++ CA H L L
Sbjct: 307 DLWTERHGSGSYGSLVLRCVDPGTFSIVELHLGVAALNGRHDHGNIRSWTERLLRRYGVRTEDVSSSTSDSGSNVKKALTQLWPRWVPCAAHTLHL 402
BLAST of mRNA_M-pyrifera_M_contig13969.6124.1 vs. uniprot
Match: A0A8J2HHQ4_COTCN (Similar to ZBED4: Zinc finger BED domain-containing protein 4 (Homo sapiens) n=1 Tax=Cotesia congregata TaxID=51543 RepID=A0A8J2HHQ4_COTCN) HSP 1 Score: 60.8 bits (146), Expect = 3.680e-8 Identity = 47/134 (35.07%), Postives = 70/134 (52.24%), Query Frame = 1
Query: 37 CPGVKTMVECVAQKAR-EVHDLVAIKLLGQDVALTGDGWESRSGQSFYSLTAHVGDPNTYELERHTLACRAMHDRHTGVNVCNLNQELLKEFG---VRNGRITSFTSDTAANQKKAVRLMGVPFIACACHVLEL 426
CP + E + QK E+ + +A L+ ++ T DGW+SRSG + SLT H + +EL+ + + DRHTG N+ +E+L E+ V N I FT+D AN A+R G I C H+L+L
Sbjct: 164 CPN---LYEQIKQKLMDELQNDIASGLMS--LSFTTDGWKSRSGHHYLSLTVHYMTVD-FELKNIMIGLTQLEDRHTGSNIKAKLEEMLLEWNLLDVPNVPIY-FTTDNGANICNAIRKGGWNHIYCFAHMLQL 290
BLAST of mRNA_M-pyrifera_M_contig13969.6124.1 vs. uniprot
Match: UPI0010F96B5A (E3 SUMO-protein ligase ZBED1-like n=2 Tax=Osmia TaxID=124287 RepID=UPI0010F96B5A) HSP 1 Score: 60.5 bits (145), Expect = 6.330e-8 Identity = 39/135 (28.89%), Postives = 72/135 (53.33%), Query Frame = 1
Query: 31 FQCPGVKTMVECVAQKAREVHDLVAIKL-LGQDVALTGDGWESRSGQSFYSLTAHVGDPNTYELERHTLACRAMHDRHTGVNVCNLNQELLKEFGVRNGRITSFTSDTAANQKKAVR-LMGVPF-IACACHVLEL 426
+ CP ++++ + E + +L + D+A+T DGW S+S S+ S+ A D + + ++ +TL + M D +T N+ ++ ++KE + ++ S D A N KA L+GV + I+CA H L+L
Sbjct: 133 YHCPSPESIMHRLQLLYNEKRMKIEEELSMASDIAITSDGWSSKSQDSYISMAAQFID-DKWIIKNYTLCTQPMEDHYTDENLTSMFN-IIKEEWHLSSKVNSLVHDNAYNVSKAANSLIGVRYNISCAAHTLQL 265
BLAST of mRNA_M-pyrifera_M_contig13969.6124.1 vs. uniprot
Match: UPI000B92F94B (zinc finger BED domain-containing protein 1-like isoform X1 n=2 Tax=Myzus persicae TaxID=13164 RepID=UPI000B92F94B) HSP 1 Score: 58.9 bits (141), Expect = 2.150e-7 Identity = 33/111 (29.73%), Postives = 58/111 (52.25%), Query Frame = 1
Query: 91 HDLVAIKLLGQDVALTGDGWESRSGQSFYSLTAHVGDPNTYELERHTLACRAMHDRHTGVNVCNLNQELLKEFGVRNGRITSFTSDTAANQKKAVRLMGVPFIACACHVLE 423
H + I + V+LT D W S + SF ++T H D + L+ + L R + HT + + +++KE+ + + +I + +D+ AN K A+RL+G+ I C H L
Sbjct: 76 HKIETILSQAKYVSLTSDVWTSLNTISFITVTVHFFDIDL-NLKTYVLTTRKLESNHTAQYLSEVLTDVIKEWNIED-KIVAIVTDSGANIKAAIRLLGLNHIPCVAHKLN 184
BLAST of mRNA_M-pyrifera_M_contig13969.6124.1 vs. uniprot
Match: UPI001EE5E460 (zinc finger BED domain-containing protein 4-like n=1 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE5E460) HSP 1 Score: 58.2 bits (139), Expect = 3.400e-7 Identity = 31/101 (30.69%), Postives = 55/101 (54.46%), Query Frame = 1
Query: 127 VALTGDGWESRSGQSFYSLTAHVGDPNTYELERHTLACRAMHDRHTGVNVCNLNQELLKEFGVRNGRITSFTSDTAANQKKAVRLMG-VPFIACACHVLEL 426
+A+T DGW SRS +S+ ++TAH + + ++LE L R + + HTG N+ N+ + E+ + + ++D A+N AV+ P I C H + +
Sbjct: 129 MAVTTDGWTSRSTESYITITAHYVNED-WQLENPVLQTRTLQESHTGANLANVLDSAVDEWNLGKFSQIAISTDNASNIVSAVKQSRFAPHIRCFAHTINI 228
BLAST of mRNA_M-pyrifera_M_contig13969.6124.1 vs. uniprot
Match: UPI001E1DEB19 (E3 SUMO-protein ligase ZBED1-like n=2 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DEB19) HSP 1 Score: 57.0 bits (136), Expect = 1.040e-6 Identity = 31/104 (29.81%), Postives = 58/104 (55.77%), Query Frame = 1
Query: 115 LGQDVALTGDGWESRSGQSFYSLTAHVGDPNTYELERHTLACRAMHDRHTGVNVCNLNQELLKEFGVRNGRITSFTSDTAANQKKAVRLMGVPFIACACHVLEL 426
+G +A+T DGW S + +S+ ++TAH + N +EL L + HTG ++ +E++ ++ + + + +D AAN++KA++L+G C H L L
Sbjct: 181 VGGHLAITHDGWTSCATESYDTVTAHFINSN-WELRSAVLQTTKVEGSHTGEHIAERLKEMVSDWNIP---VPTVVTDNAANERKAIQLLGWERFGCYGHRLNL 280
BLAST of mRNA_M-pyrifera_M_contig13969.6124.1 vs. uniprot
Match: A0A2B4RF51_STYPI (Zinc finger BED domain-containing protein 1 n=3 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4RF51_STYPI) HSP 1 Score: 56.2 bits (134), Expect = 1.920e-6 Identity = 43/142 (30.28%), Postives = 67/142 (47.18%), Query Frame = 1
Query: 7 YGLTGKSNFQCPGVKTMVECVAQKAREVHDLVAIKLLGQDVALTGDGWESRSGQSFYSLTAHVGDPNTYELERHTLACRAMHDRHTGVNVCNLNQELLKEFGV-RNGRITSFTSDTAANQKKAVRLMGV-PFIACACHVLEL 426
Y L + +F + + E V KA DL + + VALT DGW SRS +S+ ++TAH + ++ + L R M HT N+ N+ + E+ R + S TSD A+N A + + P + C H + L
Sbjct: 151 YDLPSRVHFSEKVIPKLYEEV--KAEVESDLKSAEF----VALTSDGWTSRSTESYITVTAHF--IQEWNIKNYVLQTRRMDVSHTSENLSNILTSAISEWNXQRYEQNPSLTSDNASNIVNAAKQAELSPHVGCVAHTINL 284 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig13969.6124.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig13969.6124.1 >prot_M-pyrifera_M_contig13969.6124.1 ID=prot_M-pyrifera_M_contig13969.6124.1|Name=mRNA_M-pyrifera_M_contig13969.6124.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=142bp MIYGLTGKSNFQCPGVKTMVECVAQKAREVHDLVAIKLLGQDVALTGDGWback to top mRNA from alignment at M-pyrifera_M_contig13969:810..1702+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig13969.6124.1 ID=mRNA_M-pyrifera_M_contig13969.6124.1|Name=mRNA_M-pyrifera_M_contig13969.6124.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=893bp|location=Sequence derived from alignment at M-pyrifera_M_contig13969:810..1702+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig13969:810..1702+ >mRNA_M-pyrifera_M_contig13969.6124.1 ID=mRNA_M-pyrifera_M_contig13969.6124.1|Name=mRNA_M-pyrifera_M_contig13969.6124.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=852bp|location=Sequence derived from alignment at M-pyrifera_M_contig13969:810..1702+ (Macrocystis pyrifera P11B4 male)back to top |