mRNA_M-pyrifera_M_contig13966.6123.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig13966.6123.1 vs. uniprot
Match: D7FM60_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM60_ECTSI) HSP 1 Score: 127 bits (320), Expect = 9.560e-36 Identity = 67/78 (85.90%), Postives = 75/78 (96.15%), Query Frame = 1
Query: 232 MMRLCLASKGNKAEQINPLAMSLGLAVPVVLVYAFILSLQTYVLRLDIIVAIIGLVFVGFEGLLSIGTAISFYHAFRG 465
MMRL LASKGNKAEQINPLAMSLGLAVPV+L+YAF L+LQTYVLRLD+I+A+IGLVFVG EGLLS+GTA+SFYHAFRG
Sbjct: 1 MMRLFLASKGNKAEQINPLAMSLGLAVPVILLYAFSLALQTYVLRLDVIMAVIGLVFVGLEGLLSVGTAVSFYHAFRG 78
BLAST of mRNA_M-pyrifera_M_contig13966.6123.1 vs. uniprot
Match: A0A7R9YFX6_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YFX6_9STRA) HSP 1 Score: 129 bits (324), Expect = 1.680e-35 Identity = 66/140 (47.14%), Postives = 93/140 (66.43%), Query Frame = 1
Query: 46 DEQKEILSSLPLEVLLYFNGWFSSCFFSLAICTYAYKAWHYYYPSGALELELSLMVLYGVVEMMRLCLASKGNKAEQINPLAMSLGLAVPVVLVYAFILSLQTYVLRLDIIVAIIGLVFVGFEGLLSIGTAISFYHAFRG 465
D K LSSLPL+VL+YFNGWFS+ FF LA+ + YK + ++Y + +L+++ VV+ RL LASKGNK E L + L P+ + YA++L+LQTYVLRLD+++ +GL FVG EGL+ I T + F A+RG
Sbjct: 5 DYYKRSLSSLPLQVLVYFNGWFSTLFFLLALALFLYKRYSFFYAGNSFAWDLTMLFFLSVVDFARLFLASKGNKTEHAGALLWFICLTAPICVGYAYLLTLQTYVLRLDVVLCSLGLAFVGLEGLIGIFTCVQFMRAYRG 144
BLAST of mRNA_M-pyrifera_M_contig13966.6123.1 vs. uniprot
Match: A0A6U4EE63_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4EE63_9STRA) HSP 1 Score: 127 bits (318), Expect = 1.530e-34 Identity = 64/134 (47.76%), Postives = 93/134 (69.40%), Query Frame = 1
Query: 64 LSSLPLEVLLYFNGWFSSCFFSLAICTYAYKAWHYYYPSGALELELSLMVLYGVVEMMRLCLASKGNKAEQINPLAMSLGLAVPVVLVYAFILSLQTYVLRLDIIVAIIGLVFVGFEGLLSIGTAISFYHAFRG 465
LSSLPL++L+YFNGWFS+ FF L I + YK ++ YY +L+++ L V++ +RL L SKGNK E L + L VP+ + YA++L+LQTYVLR+D+++ +GL+FVGFE L+SI T + F A+RG
Sbjct: 15 LSSLPLQILVYFNGWFSTMFFLLGIALFLYKRYNLYYAGNGFGWDLAMLFLMTVLDALRLFLGSKGNKTEHAGALMWFIFLTVPICVGYAYLLTLQTYVLRIDVVLCSLGLIFVGFECLISIFTCVQFLRAYRG 148
BLAST of mRNA_M-pyrifera_M_contig13966.6123.1 vs. uniprot
Match: A0A1V9ZL49_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZL49_9STRA) HSP 1 Score: 106 bits (265), Expect = 1.240e-26 Identity = 60/136 (44.12%), Postives = 89/136 (65.44%), Query Frame = 1
Query: 58 EILSSLPLEVLLYFNGWFSSCFFSLAICTYAYKAWHYYYP-SGALELELSLMVLYGVVEMMRLCLASKGNKAEQINPLAMSLGLAVPVVLVYAFILSLQTYVLRLDIIVAIIGLVFVGFEGLLSIGTAISFYHAFR 462
E+LSSLPLEVLL+FN WFS + +++ + YKA + YP +GA E+ + LY +++ +R+ ASKGNK EQ+ PL + L +P V+ ++ +SLQTYVLR+D+++ IGLVFVG E + T + A R
Sbjct: 4 ELLSSLPLEVLLFFNRWFSHVYIAISAVVFVYKAMYLPYPPTGAFTWEVLFLGLYYLIDQVRIFQASKGNKTEQVFPLLTACLLTLPCVVSLSYYISLQTYVLRVDVVLNAIGLVFVGLESIFGPITTLRLLRASR 139
BLAST of mRNA_M-pyrifera_M_contig13966.6123.1 vs. uniprot
Match: A0A7S1CJJ7_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CJJ7_9STRA) HSP 1 Score: 106 bits (264), Expect = 1.860e-26 Identity = 62/140 (44.29%), Postives = 88/140 (62.86%), Query Frame = 1
Query: 46 DEQKEILSSLPLEVLLYFNGWFSSCFFSLAICTYAYKAWHYYYPSGALELELSLMVLYGVVEMMRLCLASKGNKAEQINPLAMSLGLAVPVVLVYAFILSLQTYVLRLDIIVAIIGLVFVGFEGLLSIGTAISFYHAFRG 465
D +I SSLPL+V L+FN ++ FF + YK + +PS A E++++ Y VE+ RL LAS GNK EQI+P+ ++ AVPVV F L+ QTYVLR+D I+ ++ LVFVGFE S+ T ++FY + RG
Sbjct: 3 DAYNDIKSSLPLQVALHFNRPYAYMFFLIGFVEAVYKGIKFPFPSSAYGAEMAMLFAYIFVELSRLWLASMGNKTEQISPIVWAVAFAVPVVAYNIFNLTSQTYVLRIDQILNVVSLVFVGFEVFFSLITMLTFYRSGRG 142
BLAST of mRNA_M-pyrifera_M_contig13966.6123.1 vs. uniprot
Match: UPI00112AF3F6 (transmembrane protein 216 isoform X1 n=3 Tax=Rhinatrema bivittatum TaxID=194408 RepID=UPI00112AF3F6) HSP 1 Score: 103 bits (257), Expect = 3.830e-25 Identity = 61/138 (44.20%), Postives = 87/138 (63.04%), Query Frame = 1
Query: 49 EQKEILSSLPLEVLLYFNGWFSSCFFSLAICTYAYKAWHYYYPSGALELELSLMVLYGVVEMMRLCLASKGNKAEQINPLAMSLGLAVPVVLVYAFILSLQTYVLRLDIIVAIIGLVFVGFEGLLSIGTAISFYHAFR 462
+++ ILSS PLE+LL+ NGW+ + +F L I + YK YP+ L L+L ++ LY +E++R+ SKGN ++ PL +SLGL VP ++ + L LQTYVLRL+ IV +I L+F E LLSI ISF R
Sbjct: 9 KRRGILSSTPLEILLFLNGWYYATYFVLEILIFVYKGLILPYPTANLTLDLVMLFLYLGIEVIRIFYGSKGNLLQRKMPLTISLGLTVPAAMMAVYYLLLQTYVLRLEAIVNVILLIFYALELLLSIVALISFSRKIR 146
BLAST of mRNA_M-pyrifera_M_contig13966.6123.1 vs. uniprot
Match: A0A8J5X7D2_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X7D2_DIALT) HSP 1 Score: 102 bits (255), Expect = 4.340e-25 Identity = 57/134 (42.54%), Postives = 86/134 (64.18%), Query Frame = 1
Query: 61 ILSSLPLEVLLYFNGWFSSCFFSLAICTYAYKAWHYYYPSGALELELSLMVLYGVVEMMRLCLASKGNKAEQINPLAMSLGLAVPVVLVYAFILSLQTYVLRLDIIVAIIGLVFVGFEGLLSIGTAISFYHAFR 462
+LSSLPL+VLL+FNGW+ + +A+ Y YK YP+ L LE+ +++ ++E RL LAS+GNK E I P+A +LGL++P+ Y + L Q +VLRLD ++ II +V + E LL TA+ F+ + R
Sbjct: 7 MLSSLPLQVLLFFNGWYDLVYVVVALIEYIYKGSRLPYPASVLGLEIFGILMVALIEPCRLLLASRGNKTESIGPIAWNLGLSLPLFGAYTYYLRFQAFVLRLDQVLNIIAIVILAVEWLLGAITALVFWQSRR 140
BLAST of mRNA_M-pyrifera_M_contig13966.6123.1 vs. uniprot
Match: A0A6P7Y2F1_9AMPH (transmembrane protein 216 isoform X1 n=3 Tax=Gymnophiona TaxID=8445 RepID=A0A6P7Y2F1_9AMPH) HSP 1 Score: 100 bits (249), Expect = 5.930e-24 Identity = 61/148 (41.22%), Postives = 92/148 (62.16%), Query Frame = 1
Query: 4 FDRIRSRPRIMPRPDEQKEILSSLPLEVLLYFNGWFSSCFFSLAICTYAYKAWHYYYPSGALELELSLMVLYGVVEMMRLCLASKGNKAEQINPLAMSLGLAVPVVLVYAFILSLQTYVLRLDIIVAIIGLVFVGFEGLLSIGTAISF 447
F R + R++ + ++ +LSS PLE+LL+ NGW+ + +F L I + YK YP+ L L++ ++ LY +E++R+ SKGN ++ PL +SLGL +P ++ + L LQTYVLRL+ IV II LVF E LLSI +SF
Sbjct: 13 FPRFAQQARVLGK---RRAVLSSTPLEILLFLNGWYYATYFLLEILIFVYKGLILPYPTANLTLDIVMLFLYLGIEVIRIFYGSKGNLLQRKMPLTISLGLMIPAAVMAVYYLLLQTYVLRLEAIVNIILLVFYALELLLSIVALMSF 157
BLAST of mRNA_M-pyrifera_M_contig13966.6123.1 vs. uniprot
Match: A0A6P8PRR6_GEOSA (transmembrane protein 216 isoform X1 n=4 Tax=Gymnophiona TaxID=8445 RepID=A0A6P8PRR6_GEOSA) HSP 1 Score: 99.8 bits (247), Expect = 1.380e-23 Identity = 59/128 (46.09%), Postives = 83/128 (64.84%), Query Frame = 1
Query: 64 LSSLPLEVLLYFNGWFSSCFFSLAICTYAYKAWHYYYPSGALELELSLMVLYGVVEMMRLCLASKGNKAEQINPLAMSLGLAVPVVLVYAFILSLQTYVLRLDIIVAIIGLVFVGFEGLLSIGTAISF 447
+SS PLE+LL+ NGW+ + +F L I + YK YP+ L L++ ++ LY +E++R+ SKGN ++ PLA+SLGL +P ++ + L LQTYVLRL+ IV II LVF E LLSI ISF
Sbjct: 36 MSSTPLEILLFLNGWYYATYFLLEILIFVYKGLILPYPTANLTLDIVMLFLYLGIEVIRIFYGSKGNLLQRKMPLAISLGLMIPAAVMAVYYLLLQTYVLRLEAIVNIILLVFYALELLLSIVALISF 163
BLAST of mRNA_M-pyrifera_M_contig13966.6123.1 vs. uniprot
Match: A0A7S3RB10_DUNTE (Hypothetical protein n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3RB10_DUNTE) HSP 1 Score: 99.8 bits (247), Expect = 2.920e-23 Identity = 57/143 (39.86%), Postives = 90/143 (62.94%), Query Frame = 1
Query: 34 MPRPDEQKEILSSLPLEVLLYFNGWFSSCFFSLAICTYAYKAWHYYYPSGALELELSLMVLYGVVEMMRLCLASKGNKAEQINPLAMSLGLAVPVVLVYAFILSLQTYVLRLDIIVAIIGLVFVGFEGLLSIGTAISFYHAFR 462
MP + +L+SL L++L++F+ W++ ++ L I + YK YP ++E S LY ++E+ RL L +KGNKAEQ+ P+ SL LA+P++ +YA+ + QTYVL++D+I+ I L F+G + LLSI A F A R
Sbjct: 55 MPVKKPVRRVLTSLTLQILIFFSIWWNCFYYVLNILVFVYKGLVLPYPQQNFDMEFSFAWLYIILEIPRLFLVTKGNKAEQVVPIVFSLILALPLLAMYAYFIDFQTYVLKIDLILNGIALGFIGLQVLLSIFAAYRFATATR 197 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig13966.6123.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig13966.6123.1 >prot_M-pyrifera_M_contig13966.6123.1 ID=prot_M-pyrifera_M_contig13966.6123.1|Name=mRNA_M-pyrifera_M_contig13966.6123.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=156bp VFDRIRSRPRIMPRPDEQKEILSSLPLEVLLYFNGWFSSCFFSLAICTYAback to top mRNA from alignment at M-pyrifera_M_contig13966:2893..5770- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig13966.6123.1 ID=mRNA_M-pyrifera_M_contig13966.6123.1|Name=mRNA_M-pyrifera_M_contig13966.6123.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=2878bp|location=Sequence derived from alignment at M-pyrifera_M_contig13966:2893..5770- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig13966:2893..5770- >mRNA_M-pyrifera_M_contig13966.6123.1 ID=mRNA_M-pyrifera_M_contig13966.6123.1|Name=mRNA_M-pyrifera_M_contig13966.6123.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=936bp|location=Sequence derived from alignment at M-pyrifera_M_contig13966:2893..5770- (Macrocystis pyrifera P11B4 male)back to top |