mRNA_M-pyrifera_M_contig13947.6117.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig13947.6117.1
Unique NamemRNA_M-pyrifera_M_contig13947.6117.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig13947.6117.1 vs. uniprot
Match: D8LF27_ECTSI (Flagellar associated protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF27_ECTSI)

HSP 1 Score: 779 bits (2011), Expect = 7.720e-276
Identity = 390/396 (98.48%), Postives = 394/396 (99.49%), Query Frame = 1
Query:    1 FQRDDDESLNEIGYDDIGGCKRQLAQIRELIELPLRHPQLFNAIGIPPPRGVLMYGPPGCGKTMIARAVASETGAYCFTINGPEIMSKLSGESETNLRKAFEDAEANSPAIIFIDEIDSIAPRRDKAGGEVEKRIVSQLLTLMDGIKPTSHVVVIAATNRPNVIEPALRRFGRFDRELDIGIPDEEGRLEVLRIKTRTMKLDDDVDLIQVAKDTHGFVGADLSQLCMEAALRCIREQMHTIDVDADKIPVEVLDGLAITNDHFKYALQHCNPSALRETLVEVPNVSWKDVGGLEDVKRELQETVQQYPVEHADKFKKFGMSASKGTLFYGPPGCGKTLLAKAIANECGANFISVKGPELLSMWFGESEANVRELFDKARAAAPCILFFDEMDSIAK 1188
             +RDDDESLNEIGYDDIGGCKRQLAQIRELIELPLRHPQLFNA+GIPPPRGVLMYGPPGCGKTMIARAVASETGAYCFTINGPEIMSKLSGESETNLRKAF+DAEANSPAIIFIDEIDSIAPRRDKAGGEVEKRIVSQLLTLMDGIKPTSHVVVIAATNRPNVIEPALRRFGRFDRELDIGIPDEEGRLEVLRIKTRTMKLDDDVDLIQ+AKDTHGFVGADLSQLCMEAALRCIREQMHTIDVDADKIPVEVLDGLAITNDHFKYALQHCNPSALRETLVEVPNVSWKDVGGLEDVKRELQETVQ YPVEHADKFKKFGMSASKGTLFYGPPGCGKTLLAKAIANECGANFISVKGPELLSMWFGESEANVRELFDKARAAAPCILFFDEMDSIAK
Sbjct:  343 LKRDDDESLNEIGYDDIGGCKRQLAQIRELIELPLRHPQLFNAVGIPPPRGVLMYGPPGCGKTMIARAVASETGAYCFTINGPEIMSKLSGESETNLRKAFDDAEANSPAIIFIDEIDSIAPRRDKAGGEVEKRIVSQLLTLMDGIKPTSHVVVIAATNRPNVIEPALRRFGRFDRELDIGIPDEEGRLEVLRIKTRTMKLDDDVDLIQIAKDTHGFVGADLSQLCMEAALRCIREQMHTIDVDADKIPVEVLDGLAITNDHFKYALQHCNPSALRETLVEVPNVSWKDVGGLEDVKRELQETVQ-YPVEHADKFKKFGMSASKGTLFYGPPGCGKTLLAKAIANECGANFISVKGPELLSMWFGESEANVRELFDKARAAAPCILFFDEMDSIAK 737          
BLAST of mRNA_M-pyrifera_M_contig13947.6117.1 vs. uniprot
Match: A0A835YZ06_9STRA (Valosin-containing protein, isoform CRA_a n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ06_9STRA)

HSP 1 Score: 712 bits (1839), Expect = 3.560e-252
Identity = 351/396 (88.64%), Postives = 378/396 (95.45%), Query Frame = 1
Query:    1 FQRDDDESLNEIGYDDIGGCKRQLAQIRELIELPLRHPQLFNAIGIPPPRGVLMYGPPGCGKTMIARAVASETGAYCFTINGPEIMSKLSGESETNLRKAFEDAEANSPAIIFIDEIDSIAPRRDKAGGEVEKRIVSQLLTLMDGIKPTSHVVVIAATNRPNVIEPALRRFGRFDRELDIGIPDEEGRLEVLRIKTRTMKLDDDVDLIQVAKDTHGFVGADLSQLCMEAALRCIREQMHTIDVDADKIPVEVLDGLAITNDHFKYALQHCNPSALRETLVEVPNVSWKDVGGLEDVKRELQETVQQYPVEHADKFKKFGMSASKGTLFYGPPGCGKTLLAKAIANECGANFISVKGPELLSMWFGESEANVRELFDKARAAAPCILFFDEMDSIAK 1188
             +RDDDESL+E+GYDDIGGC++QL QIRELIELPLRHPQLFN++GIPPPRGVLMYGPPGCGKTMIARAVA+ETGAYCFTINGPEIMSKLSGESETNLRKAFE+AEAN+PAIIFIDEIDSIA RRDKAGGE+EKR+VSQLLTLMDGIKPTSHVVVI ATNRPN+I+PALRRFGRFDREL I  PDEEGRLE+LRIKTRTMKL +DVDL Q+A+DTHGFVGADL+QLCMEAAL CIR++M  IDVDAD IPVE+LD LA++NDHF+++LQ CNPSALRETLVEVPNVSWKDVGGLEDVKRELQETVQ YPVEHADKFKKFGM  SKGTLFYGPPGCGKTLLAKAIANECGANFISVKGPELLSMWFGESEANVRELFDKARAAAPCILFFDEMDSIAK
Sbjct:  296 LKRDDDESLDEVGYDDIGGCRKQLGQIRELIELPLRHPQLFNSVGIPPPRGVLMYGPPGCGKTMIARAVAAETGAYCFTINGPEIMSKLSGESETNLRKAFEEAEANAPAIIFIDEIDSIAARRDKAGGELEKRVVSQLLTLMDGIKPTSHVVVIGATNRPNIIDPALRRFGRFDRELSIMQPDEEGRLEILRIKTRTMKLAEDVDLEQLARDTHGFVGADLAQLCMEAALYCIRQKMDVIDVDADTIPVEILDNLAVSNDHFRHSLQTCNPSALRETLVEVPNVSWKDVGGLEDVKRELQETVQ-YPVEHADKFKKFGMEPSKGTLFYGPPGCGKTLLAKAIANECGANFISVKGPELLSMWFGESEANVRELFDKARAAAPCILFFDEMDSIAK 690          
BLAST of mRNA_M-pyrifera_M_contig13947.6117.1 vs. uniprot
Match: A0A7S2V5J3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5J3_9STRA)

HSP 1 Score: 667 bits (1722), Expect = 6.370e-233
Identity = 323/396 (81.57%), Postives = 364/396 (91.92%), Query Frame = 1
Query:    1 FQRDDDESLNEIGYDDIGGCKRQLAQIRELIELPLRHPQLFNAIGIPPPRGVLMYGPPGCGKTMIARAVASETGAYCFTINGPEIMSKLSGESETNLRKAFEDAEANSPAIIFIDEIDSIAPRRDKAGGEVEKRIVSQLLTLMDGIKPTSHVVVIAATNRPNVIEPALRRFGRFDRELDIGIPDEEGRLEVLRIKTRTMKLDDDVDLIQVAKDTHGFVGADLSQLCMEAALRCIREQMHTIDVDADKIPVEVLDGLAITNDHFKYALQHCNPSALRETLVEVPNVSWKDVGGLEDVKRELQETVQQYPVEHADKFKKFGMSASKGTLFYGPPGCGKTLLAKAIANECGANFISVKGPELLSMWFGESEANVRELFDKARAAAPCILFFDEMDSIAK 1188
             +R +DE LNE+GYDDIGGC++QL  IREL+ELPLRHPQLFN +GIPPPRGVLMYGPPGCGKTMIA+AVA+ETGA+  TINGPE+MSKL+GESETNLRKAFE+AEAN+PAIIF+DEIDSIAP+RDKAGGEVEKRIVS LLTLMD IKPTSHVVVIAATNRPN+I+PALRRFGRFDRELDIG+PD++GRLEVLRIKTR MK+D  +DL  +AK+THGFVGADLSQLCMEAAL+C+RE+   ID+DA+ I  EVLD L ITNDHF++AL  CNPSALRE  VEVP+V+W D+GGLE+VKRELQE VQ YPVEHAD+F+KFGMSASKG LFYGPPGCGKTLLAKAIANEC +NFISVKGPELL+MWFGESEANVR+LFDKARAAAPCILFFDEMDSIAK
Sbjct:  286 IKRSEDERLNELGYDDIGGCRKQLGLIRELVELPLRHPQLFNTVGIPPPRGVLMYGPPGCGKTMIAQAVAAETGAFLITINGPEVMSKLAGESETNLRKAFEEAEANAPAIIFLDEIDSIAPKRDKAGGEVEKRIVSSLLTLMDSIKPTSHVVVIAATNRPNIIDPALRRFGRFDRELDIGVPDDDGRLEVLRIKTRNMKIDQSLDLEAIAKETHGFVGADLSQLCMEAALQCVREKSEEIDIDAESIEAEVLDSLCITNDHFRHALTVCNPSALRENYVEVPDVTWDDIGGLEEVKRELQELVQ-YPVEHADQFEKFGMSASKGVLFYGPPGCGKTLLAKAIANECNSNFISVKGPELLTMWFGESEANVRDLFDKARAAAPCILFFDEMDSIAK 680          
BLAST of mRNA_M-pyrifera_M_contig13947.6117.1 vs. uniprot
Match: A0A7S3LYG9_9STRA (Hypothetical protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3LYG9_9STRA)

HSP 1 Score: 649 bits (1674), Expect = 2.570e-228
Identity = 318/394 (80.71%), Postives = 355/394 (90.10%), Query Frame = 1
Query:    7 RDDDESLNEIGYDDIGGCKRQLAQIRELIELPLRHPQLFNAIGIPPPRGVLMYGPPGCGKTMIARAVASETGAYCFTINGPEIMSKLSGESETNLRKAFEDAEANSPAIIFIDEIDSIAPRRDKAGGEVEKRIVSQLLTLMDGIKPTSHVVVIAATNRPNVIEPALRRFGRFDRELDIGIPDEEGRLEVLRIKTRTMKLDDDVDLIQVAKDTHGFVGADLSQLCMEAALRCIREQMHTIDVDADKIPVEVLDGLAITNDHFKYALQHCNPSALRETLVEVPNVSWKDVGGLEDVKRELQETVQQYPVEHADKFKKFGMSASKGTLFYGPPGCGKTLLAKAIANECGANFISVKGPELLSMWFGESEANVRELFDKARAAAPCILFFDEMDSIAK 1188
            R++D+ L EIGYDDIGGC +QLAQIREL+ELPLRHPQ+F +IGIPPPRGVLMYGPPG GKT IA+AVA+ETGAY F +NGPEIM+K++GESE NLRK F +AEA+SPAIIFIDEIDSIAP+RDKAGGEVEKR+VSQLLTLMDGIKPTS+VVVIAATNRPN ++PALRRFGRFDRELDIG+PD +GRLEV+RIKTR MKLD DVDL  +AKDTHG+VGADLSQLCMEAA +CIRE MH ID+DA+ I   VLD L I+  HFK+AL   NPSALRE +VEVPNV+W DVGGLEDVKREL ETVQ YPVEHADKF KFGM  SKG LF+GPPGCGKTLLAKAIANECGANFIS+KGPELL+MWFGESEAN+R+LFDKARAAAPCILFFDEMDSIAK
Sbjct:   39 REEDDRLGEIGYDDIGGCGKQLAQIRELVELPLRHPQIFRSIGIPPPRGVLMYGPPGSGKTSIAKAVAAETGAYFFLLNGPEIMAKMAGESEANLRKVFTEAEAHSPAIIFIDEIDSIAPKRDKAGGEVEKRLVSQLLTLMDGIKPTSNVVVIAATNRPNTLDPALRRFGRFDRELDIGVPDTDGRLEVMRIKTRNMKLDPDVDLKLIAKDTHGYVGADLSQLCMEAAFQCIRESMHNIDIDAESIDATVLDSLKISASHFKHALSVTNPSALRENIVEVPNVTWDDVGGLEDVKRELYETVQ-YPVEHADKFAKFGMQPSKGVLFFGPPGCGKTLLAKAIANECGANFISIKGPELLTMWFGESEANIRDLFDKARAAAPCILFFDEMDSIAK 431          
BLAST of mRNA_M-pyrifera_M_contig13947.6117.1 vs. uniprot
Match: W7TW67_9STRA (Transitional endoplasmic reticulum atpase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TW67_9STRA)

HSP 1 Score: 647 bits (1668), Expect = 5.500e-224
Identity = 310/396 (78.28%), Postives = 364/396 (91.92%), Query Frame = 1
Query:    1 FQRDDDESLNEIGYDDIGGCKRQLAQIRELIELPLRHPQLFNAIGIPPPRGVLMYGPPGCGKTMIARAVASETGAYCFTINGPEIMSKLSGESETNLRKAFEDAEANSPAIIFIDEIDSIAPRRDKAGGEVEKRIVSQLLTLMDGIKPTSHVVVIAATNRPNVIEPALRRFGRFDRELDIGIPDEEGRLEVLRIKTRTMKLDDDVDLIQVAKDTHGFVGADLSQLCMEAALRCIREQMHTIDVDADKIPVEVLDGLAITNDHFKYALQHCNPSALRETLVEVPNVSWKDVGGLEDVKRELQETVQQYPVEHADKFKKFGMSASKGTLFYGPPGCGKTLLAKAIANECGANFISVKGPELLSMWFGESEANVRELFDKARAAAPCILFFDEMDSIAK 1188
              R+DDE L+E+GYDDIGGCK+QLA IREL+ELPLRHPQLF ++GIPPPRGVL+YGPPG GKTMIA+AVA+ET AY FTINGPEIMSK+SGESE+ LRKAFEDAE N+PAI+FIDE+D+IAP+RDKAGGEVE+RIVSQ+LTL+DGIKP+S+VVV+AATNRPN I+PALRRFGRFDRELDIG+PD++GRLEVL+IKTR MKL  D+DL  VAKDTHGFVGAD+SQLCMEAAL+CIRE+M  ID+D ++I  ++LD L I N+HF++A+  CNPSALRET VEVP+V+W+DVGGLEDVKREL ET+Q YPVE+A K++KFGM A++G LFYGPPGCGKTLLAKA+ANECGANFIS+KGPELL+MWFGESEANVR+LFDKARAAAPCILFFDEMDSIAK
Sbjct:  343 LNREDDERLDELGYDDIGGCKKQLAMIRELVELPLRHPQLFRSVGIPPPRGVLLYGPPGSGKTMIAKAVAAETNAYFFTINGPEIMSKMSGESESKLRKAFEDAEKNAPAILFIDELDAIAPKRDKAGGEVERRIVSQMLTLLDGIKPSSNVVVMAATNRPNQIDPALRRFGRFDRELDIGVPDDDGRLEVLKIKTRNMKLSPDIDLALVAKDTHGFVGADISQLCMEAALQCIREKMGDIDIDEEEIDAKILDSLMIDNEHFRHAMSVCNPSALRETQVEVPDVTWEDVGGLEDVKRELAETIQ-YPVEYAAKYEKFGMPAARGVLFYGPPGCGKTLLAKAVANECGANFISIKGPELLTMWFGESEANVRDLFDKARAAAPCILFFDEMDSIAK 737          
BLAST of mRNA_M-pyrifera_M_contig13947.6117.1 vs. uniprot
Match: A0A7S0ZAC4_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZAC4_9RHOD)

HSP 1 Score: 625 bits (1611), Expect = 4.670e-217
Identity = 303/396 (76.52%), Postives = 355/396 (89.65%), Query Frame = 1
Query:    1 FQRDDDESLNEIGYDDIGGCKRQLAQIRELIELPLRHPQLFNAIGIPPPRGVLMYGPPGCGKTMIARAVASETGAYCFTINGPEIMSKLSGESETNLRKAFEDAEANSPAIIFIDEIDSIAPRRDKAGGEVEKRIVSQLLTLMDGIKPTSHVVVIAATNRPNVIEPALRRFGRFDRELDIGIPDEEGRLEVLRIKTRTMKLDDDVDLIQVAKDTHGFVGADLSQLCMEAALRCIREQMHTIDVDADKIPVEVLDGLAITNDHFKYALQHCNPSALRETLVEVPNVSWKDVGGLEDVKRELQETVQQYPVEHADKFKKFGMSASKGTLFYGPPGCGKTLLAKAIANECGANFISVKGPELLSMWFGESEANVRELFDKARAAAPCILFFDEMDSIAK 1188
             +R+D+E L++IGYDDIGG ++QLAQIREL+ELPLRHPQLF ++G+ PPRG+LMYGPPG GKT+IARAVA+ETGA+ F INGPEIMSKL+GESE+NLRKAFE+AE N+PAIIFIDEIDSIAP+R+K  GEVE+RIVSQLLTLMDGIK  SHVVVIAATNRPN I+PALRRFGRFDRELDIG+PDE GRLE+LRI T+ MKLD DVDL +V+K+THG+VGAD++QLC EAAL+CIRE+M  ID++ D+I  E+LD LA+T DHF ++L   NPSALRET VEVPNV+W DVGGLE VKRELQETVQ YPVEH + F+KFGMS SKG LFYGPPGCGKTLLAKAIANEC ANFIS+KGPELL+MWFGESE+NVRE+FDKAR +APC+LFFDE+DSIA+
Sbjct:  213 IKREDEERLDDIGYDDIGGVRKQLAQIRELVELPLRHPQLFKSVGVKPPRGILMYGPPGSGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDEIDSIAPKREKTQGEVERRIVSQLLTLMDGIKARSHVVVIAATNRPNTIDPALRRFGRFDRELDIGVPDENGRLEILRIHTKNMKLDPDVDLEKVSKETHGYVGADMAQLCTEAALQCIREKMDIIDLEDDEIDAEILDSLAVTQDHFNFSLGTSNPSALRETAVEVPNVTWDDVGGLEGVKRELQETVQ-YPVEHPEMFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESESNVREVFDKARQSAPCVLFFDELDSIAR 607          
BLAST of mRNA_M-pyrifera_M_contig13947.6117.1 vs. uniprot
Match: A0A0D2S4I0_GOSRA (Uncharacterized protein n=5 Tax=Pentapetalae TaxID=1437201 RepID=A0A0D2S4I0_GOSRA)

HSP 1 Score: 616 bits (1589), Expect = 5.440e-217
Identity = 295/394 (74.87%), Postives = 356/394 (90.36%), Query Frame = 1
Query:    4 QRDDDESLNEIGYDDIGGCKRQLAQIRELIELPLRHPQLFNAIGIPPPRGVLMYGPPGCGKTMIARAVASETGAYCFTINGPEIMSKLSGESETNLRKAFEDAEANSPAIIFIDEIDSIAPRRDKAGGEVEKRIVSQLLTLMDGIKPTSHVVVIAATNRPNVIEPALRRFGRFDRELDIGIPDEEGRLEVLRIKTRTMKLDDDVDLIQVAKDTHGFVGADLSQLCMEAALRCIREQMHTIDVDADKIPVEVLDGLAITNDHFKYALQHCNPSALRETLVEVPNVSWKDVGGLEDVKRELQETVQQYPVEHADKFKKFGMSASKGTLFYGPPGCGKTLLAKAIANECGANFISVKGPELLSMWFGESEANVRELFDKARAAAPCILFFDEMDSIA 1185
            +R+D++ L+E+GYDD+GG ++Q+AQIREL+ELPLRHPQLF +IG+ PP+G+L+YGPPG GKT+IARAVA+ETGA+ F INGPEIMSKL+GESE+NLRKAFE+AE N+P+IIFIDEIDSIAP+R+K  GEVE+RIVSQLLTLMDG+K  +HV+VI ATNRPN I+PALRRFGRFDRE+DIG+PDE GRLEVLRI T+ MKL DDVDL ++AKDTHG+VGADL+ LC EAAL+CIRE+M  ID++ + I  E+L+ +A++N+HF+ AL   NPSALRET+VEVPNVSW+D+GGLE+VKRELQETVQ YPVEH +KF+KFGMS SKG LFYGPPGCGKTLLAKAIANEC ANFISVKGPELL+MWFGESEANVRE+FDKAR +APC+LFFDE+DSIA
Sbjct:  195 RREDEDRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDESIDAEILNSMAVSNEHFQTALGTSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQ-YPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587          
BLAST of mRNA_M-pyrifera_M_contig13947.6117.1 vs. uniprot
Match: A0A2K3LVS9_TRIPR (Cell division cycle protein 48 (Fragment) n=9 Tax=Mesangiospermae TaxID=1437183 RepID=A0A2K3LVS9_TRIPR)

HSP 1 Score: 615 bits (1587), Expect = 8.600e-217
Identity = 293/394 (74.37%), Postives = 355/394 (90.10%), Query Frame = 1
Query:    4 QRDDDESLNEIGYDDIGGCKRQLAQIRELIELPLRHPQLFNAIGIPPPRGVLMYGPPGCGKTMIARAVASETGAYCFTINGPEIMSKLSGESETNLRKAFEDAEANSPAIIFIDEIDSIAPRRDKAGGEVEKRIVSQLLTLMDGIKPTSHVVVIAATNRPNVIEPALRRFGRFDRELDIGIPDEEGRLEVLRIKTRTMKLDDDVDLIQVAKDTHGFVGADLSQLCMEAALRCIREQMHTIDVDADKIPVEVLDGLAITNDHFKYALQHCNPSALRETLVEVPNVSWKDVGGLEDVKRELQETVQQYPVEHADKFKKFGMSASKGTLFYGPPGCGKTLLAKAIANECGANFISVKGPELLSMWFGESEANVRELFDKARAAAPCILFFDEMDSIA 1185
            +R+D++ L+E+GYDD+GG ++Q+AQIREL+ELPLRHPQLF +IG+ PP+G+L+YGPPG GKT+IARAVA+ETGA+ F INGPEIMSKL+GESE+NLRKAFE+AE N+P+IIFIDEIDSIAP+RDK  GEVE+RIVSQLLTLMDG+K  +HV+VI ATNRPN I+PALRRFGRFDRE+DIG+PDE GRLEV+RI T+ MKL +DVDL ++AK+THG+VGADL+ LC EAAL+CIRE+M  ID++ + I  E+L+ +A+TN+HF  AL   NPSALRET+VEVPNVSW+D+GGLE+VKRELQETVQ YPVEH +KF+KFGMS SKG LFYGPPGCGKTLLAKAIANEC ANFIS+KGPELL+MWFGESEANVRE+FDKAR +APC+LFFDE+DSIA
Sbjct:  195 KREDEDRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKRDKTNGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVVRIHTKNMKLSEDVDLEKIAKETHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTNEHFSTALGSSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQ-YPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIA 587          
BLAST of mRNA_M-pyrifera_M_contig13947.6117.1 vs. uniprot
Match: K8E910_9CHLO (Uncharacterized protein n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8E910_9CHLO)

HSP 1 Score: 624 bits (1609), Expect = 1.820e-216
Identity = 300/395 (75.95%), Postives = 354/395 (89.62%), Query Frame = 1
Query:    1 FQRDDDESLNEIGYDDIGGCKRQLAQIRELIELPLRHPQLFNAIGIPPPRGVLMYGPPGCGKTMIARAVASETGAYCFTINGPEIMSKLSGESETNLRKAFEDAEANSPAIIFIDEIDSIAPRRDKAGGEVEKRIVSQLLTLMDGIKPTSHVVVIAATNRPNVIEPALRRFGRFDRELDIGIPDEEGRLEVLRIKTRTMKLDDDVDLIQVAKDTHGFVGADLSQLCMEAALRCIREQMHTIDVDADKIPVEVLDGLAITNDHFKYALQHCNPSALRETLVEVPNVSWKDVGGLEDVKRELQETVQQYPVEHADKFKKFGMSASKGTLFYGPPGCGKTLLAKAIANECGANFISVKGPELLSMWFGESEANVRELFDKARAAAPCILFFDEMDSIA 1185
              R+D+E L+E+GYDD+GG ++Q+AQIREL+ELPLRHPQLF  IG+ PP+G+L+YGPPG GKT+IARAVA+ETGA+ F INGPEIMSKL+GESE+NLRKAFE+AE NSPAIIFIDE+DSIAP+RDK  GEVE+RIVSQLLTLMDG+K  SH++V+AATNRPN I+PALRRFGRFDRE+DIG+PDE GRLEV+RI T+ MKLD++VDL  VAKDTHGFVGADL+ LC EAAL+CIRE+M  ID++ D+I  E+LD +AI+NDHFK AL   NPSALRET+VEVPNVSW DVGGLE VK+ELQETVQ YPVEH +KF+KFGM+ SKG LFYGPPGCGKTLLAKAIANEC ANFIS+KGPELL+MWFGESE+NVRE+FDKAR +APC+LFFDE+DSIA
Sbjct:  211 INREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKTIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIFIDEVDSIAPKRDKTNGEVERRIVSQLLTLMDGLKARSHIIVMAATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVMRIHTKNMKLDEEVDLEVVAKDTHGFVGADLAALCTEAALQCIREKMDVIDLEDDEIDAEILDSMAISNDHFKTALAQTNPSALRETVVEVPNVSWDDVGGLETVKQELQETVQ-YPVEHPEKFEKFGMAPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESESNVREVFDKARQSAPCVLFFDELDSIA 604          
BLAST of mRNA_M-pyrifera_M_contig13947.6117.1 vs. uniprot
Match: A0A1D6GQ45_MAIZE (Cell division cycle protein 48 n=3 Tax=Poaceae TaxID=4479 RepID=A0A1D6GQ45_MAIZE)

HSP 1 Score: 616 bits (1588), Expect = 2.170e-216
Identity = 296/395 (74.94%), Postives = 355/395 (89.87%), Query Frame = 1
Query:    1 FQRDDDESLNEIGYDDIGGCKRQLAQIRELIELPLRHPQLFNAIGIPPPRGVLMYGPPGCGKTMIARAVASETGAYCFTINGPEIMSKLSGESETNLRKAFEDAEANSPAIIFIDEIDSIAPRRDKAGGEVEKRIVSQLLTLMDGIKPTSHVVVIAATNRPNVIEPALRRFGRFDRELDIGIPDEEGRLEVLRIKTRTMKLDDDVDLIQVAKDTHGFVGADLSQLCMEAALRCIREQMHTIDVDADKIPVEVLDGLAITNDHFKYALQHCNPSALRETLVEVPNVSWKDVGGLEDVKRELQETVQQYPVEHADKFKKFGMSASKGTLFYGPPGCGKTLLAKAIANECGANFISVKGPELLSMWFGESEANVRELFDKARAAAPCILFFDEMDSIA 1185
             +R+D+E L+E+GYDD+GG ++Q+AQIREL+ELPLRHPQLF +IG+ PP+G+L+YGPPG GKT+IARAVA+ETGA+ F INGPEIMSKL+GESE+NLRKAFE+AE N+P+IIFIDEIDSIAP+R+K  GEVE+RIVSQLLTLMDG+K  SHV+V+ ATNRPN I+PALRRFGRFDRE+DIG+PDE GRLEVLRI T+ MKL +DV+L  ++KDTHG+VGADL+ LC EAAL+CIRE+M  ID++ + I  E+L+ +A+TNDHFK AL   NPSALRET+VEVPNVSW+D+GGLE+VKRELQETVQ YPVEH +KF+KFGMS SKG LFYGPPGCGKTLLAKAIANEC ANFISVKGPELL+MWFGESEANVRE+FDKAR +APC+LFFDE+DSIA
Sbjct:  106 IKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRSHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVNLELISKDTHGYVGADLAALCTEAALQCIREKMDIIDLEDETIDAEILNSMAVTNDHFKTALGTSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQ-YPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 499          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig13947.6117.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LF27_ECTSI7.720e-27698.48Flagellar associated protein n=2 Tax=Ectocarpus Ta... [more]
A0A835YZ06_9STRA3.560e-25288.64Valosin-containing protein, isoform CRA_a n=1 Tax=... [more]
A0A7S2V5J3_9STRA6.370e-23381.57Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3LYG9_9STRA2.570e-22880.71Hypothetical protein n=2 Tax=Spumella elongata Tax... [more]
W7TW67_9STRA5.500e-22478.28Transitional endoplasmic reticulum atpase n=2 Tax=... [more]
A0A7S0ZAC4_9RHOD4.670e-21776.52Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A0D2S4I0_GOSRA5.440e-21774.87Uncharacterized protein n=5 Tax=Pentapetalae TaxID... [more]
A0A2K3LVS9_TRIPR8.600e-21774.37Cell division cycle protein 48 (Fragment) n=9 Tax=... [more]
K8E910_9CHLO1.820e-21675.95Uncharacterized protein n=1 Tax=Bathycoccus prasin... [more]
A0A1D6GQ45_MAIZE2.170e-21674.94Cell division cycle protein 48 n=3 Tax=Poaceae Tax... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig13947contigM-pyrifera_M_contig13947:726..8317 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score785.0
Seed ortholog evalue1.6e-224
Seed eggNOG ortholog2880.D8LF27
KEGG koko:K13525
KEGG TC3.A.16.1
KEGG Pathwayko04141,ko05134,map04141,map05134
KEGG ModuleM00400,M00403
Hectar predicted targeting categoryother localisation
EggNOG free text desc.ATP binding
EggNOG OGsCOG0464@1,KOG0730@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03019,ko04131,ko04147
Exons8
Model size1188
Cds size1188
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig13947.6117.1prot_M-pyrifera_M_contig13947.6117.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig13947 726..8317 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815830.7809672-CDS-M-pyrifera_M_contig13947:725..8471622815830.7809672-CDS-M-pyrifera_M_contig13947:725..847Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13947 726..847 -
1692277594.4219215-CDS-M-pyrifera_M_contig13947:725..8471692277594.4219215-CDS-M-pyrifera_M_contig13947:725..847Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13947 726..847 -
1622815830.7951121-CDS-M-pyrifera_M_contig13947:1458..16091622815830.7951121-CDS-M-pyrifera_M_contig13947:1458..1609Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13947 1459..1609 -
1692277594.4316201-CDS-M-pyrifera_M_contig13947:1458..16091692277594.4316201-CDS-M-pyrifera_M_contig13947:1458..1609Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13947 1459..1609 -
1622815830.8134909-CDS-M-pyrifera_M_contig13947:3116..31881622815830.8134909-CDS-M-pyrifera_M_contig13947:3116..3188Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13947 3117..3188 -
1692277594.4399452-CDS-M-pyrifera_M_contig13947:3116..31881692277594.4399452-CDS-M-pyrifera_M_contig13947:3116..3188Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13947 3117..3188 -
1622815830.8335123-CDS-M-pyrifera_M_contig13947:3916..40091622815830.8335123-CDS-M-pyrifera_M_contig13947:3916..4009Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13947 3917..4009 -
1692277594.448407-CDS-M-pyrifera_M_contig13947:3916..40091692277594.448407-CDS-M-pyrifera_M_contig13947:3916..4009Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13947 3917..4009 -
1622815830.8582091-CDS-M-pyrifera_M_contig13947:4491..46141622815830.8582091-CDS-M-pyrifera_M_contig13947:4491..4614Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13947 4492..4614 -
1692277594.456494-CDS-M-pyrifera_M_contig13947:4491..46141692277594.456494-CDS-M-pyrifera_M_contig13947:4491..4614Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13947 4492..4614 -
1622815830.8698833-CDS-M-pyrifera_M_contig13947:5436..57111622815830.8698833-CDS-M-pyrifera_M_contig13947:5436..5711Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13947 5437..5711 -
1692277594.470349-CDS-M-pyrifera_M_contig13947:5436..57111692277594.470349-CDS-M-pyrifera_M_contig13947:5436..5711Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13947 5437..5711 -
1622815830.8831964-CDS-M-pyrifera_M_contig13947:6199..63901622815830.8831964-CDS-M-pyrifera_M_contig13947:6199..6390Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13947 6200..6390 -
1692277594.4829268-CDS-M-pyrifera_M_contig13947:6199..63901692277594.4829268-CDS-M-pyrifera_M_contig13947:6199..6390Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13947 6200..6390 -
1622815830.8937972-CDS-M-pyrifera_M_contig13947:8156..83171622815830.8937972-CDS-M-pyrifera_M_contig13947:8156..8317Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13947 8157..8317 -
1692277594.493134-CDS-M-pyrifera_M_contig13947:8156..83171692277594.493134-CDS-M-pyrifera_M_contig13947:8156..8317Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13947 8157..8317 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig13947.6117.1

>prot_M-pyrifera_M_contig13947.6117.1 ID=prot_M-pyrifera_M_contig13947.6117.1|Name=mRNA_M-pyrifera_M_contig13947.6117.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=396bp
FQRDDDESLNEIGYDDIGGCKRQLAQIRELIELPLRHPQLFNAIGIPPPR
GVLMYGPPGCGKTMIARAVASETGAYCFTINGPEIMSKLSGESETNLRKA
FEDAEANSPAIIFIDEIDSIAPRRDKAGGEVEKRIVSQLLTLMDGIKPTS
HVVVIAATNRPNVIEPALRRFGRFDRELDIGIPDEEGRLEVLRIKTRTMK
LDDDVDLIQVAKDTHGFVGADLSQLCMEAALRCIREQMHTIDVDADKIPV
EVLDGLAITNDHFKYALQHCNPSALRETLVEVPNVSWKDVGGLEDVKREL
QETVQQYPVEHADKFKKFGMSASKGTLFYGPPGCGKTLLAKAIANECGAN
FISVKGPELLSMWFGESEANVRELFDKARAAAPCILFFDEMDSIAK
back to top

mRNA from alignment at M-pyrifera_M_contig13947:726..8317-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig13947.6117.1 ID=mRNA_M-pyrifera_M_contig13947.6117.1|Name=mRNA_M-pyrifera_M_contig13947.6117.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=7592bp|location=Sequence derived from alignment at M-pyrifera_M_contig13947:726..8317- (Macrocystis pyrifera P11B4 male)
TTCCAGCGTGACGACGATGAGAGCCTTAACGAGATTGGCTACGACGACAT CGGGGGCTGCAAGCGCCAGCTGGCCCAGATCCGGGAGCTGATCGAGCTGC CTCTGAGGCATCCTCAGCTCTTCAACGCCATCGGCATTCCCCCTCCAAGA GGTGTCCTCATGTGAGCGGCGGGAGGGAGGGACAGCAGTGGACGTGGGGA CGTGGTTTCAAGTTTTAATGAAACCTTGTTCTAGAAGCATGCTATGAATA CTCGTAGGAAAGGTGGTTTATTTCCACTTCATCATCTTCAGTACAGTTTT CAGGGCAGATGTATGTATGTTCCTCATCTGTATGATCTATATGATCTGTA TGATCTGTGGGATCTGTAGGTTCTATATGATCTGTATGATCTGTATGATA GACAGCTCATGTTGCCGGGTGGGAACCACATATTCTGCACGATATATCGC ATTTTTTTCTGGGCTGCATCTGTACGATACAGCAGATACTGGACGCACAA CATATCATAACGGCGGGTTAGGATCTCGATGATCTAGATGATCTACCGTA GGTCAGATGATGATCTACCTATCTGATCTATCTGAGGTGTGAATGGTTTG TGATGGTGTGCTCCTGTGATACATGCTACCGTAGTACAGCGGTAGGTAGC CCCTCTTCAGAGACCCTACGATAAGCTGTAGGGGAAAACGGTAGATAAGC GACCTCAATTTTCTGCCCACCATTTTTACTCGCTGCTGACCGTAAGGGGC CGCAAACTCTGATAACTGATAAGGGATGTTGTTGATGCAGTATGCCGGGT ACCAGGTATATGGTTAAGGGACATCCAAGGTCGAATACTCACGCTAGGGC CCGCAAAAAGGAACTGCCTATTACTGCTGTAGTCCGGGGCGAGGGGAGGG GGGCCCCGGAGATCAATGCAACATGATGGGATTCAACGATCCCGGGAATA CGTATACTTTTGTTGGTGATATCGCCATCTTGCGCGCCGCTGCTGTGCAA AGTTGATGCTCTCAGTATCTGTATCCTGTATCTGTATCTGTATCTGTTAT CTGTATCTGTATCCTGTATCTGTATCTGTATCTGTAAATGTATCTGTAAA TGTATCTGTATCTGTATCTGTATCTGTTCGCGTGTTTTACAAGTCTGCTG GCATCCTTCCGTGCTCGATCCGTTTGATACTGGCGCGATCAACCGAACGA AGAAGCCACGTTGCTGCTACAGCTGCATGTGTCAAATTGACCTGTGCAAC GCAAACAGTATGCGCCAAACGCCTGCCTACCTTCTTGTCTCTAAAACAAC AAACCACACTTTATTCTCGAAACGGTTTCCCGATCTGTAATAATCTAGGA GTCCTGCCGACGACGCCAAAAAGTGGGAAAGTAGTCCCTCCTGTACATGG CAGGTTGATTTATTTGCTCAGGTTCGGGCAGGGAGACACCACGCCTACTG TAAGGTAGGTTGTGTGGCGTTACCATAGCCTCGGGGGGGGGGGTCAGCGA CGAAATTGTCTCAAGGGTGAGCCTGCCAAGGGGCTAGACGGCCTTGAAGG CAAACATTGATGTATTGAGGCGGCACGACCTACCAGGTACGGAGTAGGAC CTGGTATCCACGTCTTCCTTTTTTTTGTTCTCAGCGATGGTCATGGTCAC TACTGGAACTTCTACGGGGTGGCATAATAATACTTGCCACGTAGTACTTT CTGTTACGGGAGACCATAGTAAATAAGACCTACGGTACACACAAAAACCT GTATATTTCCTTTTTTTACCAAGAATATTTGGTCCTATTTACTACGGTCC CCCGTAATAGTGCATACTGTAGGTATAGCACATGGTAATCATAACCTGCG ATGAACCCAAAAACACCCGTATCCCCTAATGTTTACACGCCAAATTTGAA TCTGATTATTGTACTACTGTTTCATAGGTACGGACCTCCCGGATGCGGCA AGACGATGATCGCTCGCGCAGTAGCGTCGGAGACCGGCGCTTACTGCTTT ACCATCAACGGGCCTGAGATCATGAGCAAGCTGTCCGGCGAGTCGGAGAC GAACCTGAGGAAGGCGTTTGAGGACGCCGAGGCTAACTCTCCCGCGATCA TCTTCATCGACGAGATCGGTGGGTGGCTTACTTACTCGCCTGACCGTGTG AACCGGCGACCGCCGTGCGCTGGTGTGTGTGTGTGTGTGTTTTTCGTGCT CCTGCCGTAGTTTATTTTTATTTTTATTTCGTTTTACTTTGTTTTATTTG ATTTTGTATTTGTTACGAGCGAAGCGAGTTGCTGTTGATACTTTGCGACC CTTTTTTTATCCTCTTTTTTATTTTTTTGCGAAAAGAGCACCCTTTGTTT TGCAACTTTTTTTTTACTACCAGGTACGTCGTACCCGCAATCAATCCAGA TCATCTATCCGAGGTATGGAAAAAATCCAACAGTATTATTAATATTAATA TTGCGGGGGACCACAATAAATAGAACCCACGGTAAAGACAAAAACCTATA TATATATTCCTATTTTTTTCTAACAAAATTTGGTCCTGTTTACTCTAAGG TCCCCCGTAATATAATATTGATAGTACTCTAAGGCTTTTTTTTTTTTGTT CGCCAGACTCAATCGCACCGCGAAGGGACAAGGCCGGCGGGGAGGTAGAG AAGCGCATCGTGTCTCAGCTGCTCACCCTCATGGACGGCATCAAGCCCAC GTCGCACGTGGTGGTCATCGCGGCCACCAACAGGCCGAACGTGATCGAGC CGGCCCTGAGGCGGTTCGGCAGGTTCGACCGCGAGCTGGACATCGGCATC CCCGACGAGGAGGGGAGGCTGGAGGTCCTCAGGATCAAGACCCGTACCAT GAAGCTCGATGACGATGTTGACCTTATCCAGGTGAGGGTGTAGGAGTCAC CGTTGCATCTGGTATGTACCGTACAGTTTACTCTACTGTAAGTCTTGTCC ATCGTCTTTGTTCAGACGCCGTGTATATGCTTCGGAAGTGCTCACGGCTA AATGACCGATTTTACTGTAGATTAGTAGAGCAGACTACAGCACTCTTAAT ATCGTATTGTACTAAATCCACTATTAGTACAACAGTACAAGAATATTGCT TTTATAAATACCCGAATTACCTACAGGAATTACATAACGGTTTATCCTTG AAAGCGTGACCACTCGTACATGGCTGTTTCAAAAAGAAGTGTTTCATATC TATGTTACTGTGGTACAAAAAAATCTGGTTGACGTTGACCTCAGGGGCTT TCTACGATAGAGATTCACCCTAAATTTTCTGAGGCTCCTCACTCACTTGA CCTTAAGGAGCTCCATACCTCCCCCGAAAACCGACTTAAGCAAAAATCAA ATTGCTTCTCGATGAATATTCCCATGACCCCAGTATACCAAAACACCGTT TTTCGAAACAAGATTGGCTTTCCGACGATTTTGGGTTAAGGAACCCCGTC ATTCGGAAACAAATTAGCGGAAATGTGCTATTACGGGGGTCCATAGTTAA TAGGACCTATGGTATAGATGAAAACCTATATATTTACCTATTTTACTAAC AAAATTTGGTCCCATTAACTATGGACCCCCGTAATACCTCTATCGTAGAA CGCGTCCTCATCCAGGGCAGCAGAGAATCTCGTATATTACGAAATAACTG AATTGATGCCGTTGTCCCCCCACCCCCGCCTCCTCGCAACGAGAAAACCA TAGGTCGCCAAGGACACGCACGGATTTGTGGGGGCCGATCTCTCCCAGCT GTGCATGGAGGCCGCGCTGCGCTGCATCCGCGAGCAGATGCACACCATCG ACGTCGATGCTGACAAGATCCCCGTCGTGAGTTTGCTTGCTGCTTCATGG CTGGTTGTGCCGTGGTCAAGTGTTGTGTGGTGTTGGCTTGGCCTTGCCTG CCTTGTCTTGCTTGTGGGTCTTTTGTGCCTACCTTGTGCTGTCTTGTGCT CGCCTTGTCCTGTATTGTGCTTGTCTTGTGTACTGCTCGTTTTCTGAAGA CCGCTCTTGTGCTTGCGTGTGTATCCCCTTGCGATATTGTTTGGCTGGGA GCTGCCAATGCGGCTTGGGAAGATAACCAAGAGCGCGGGGGGGGGGGGGG GTCGTTTTAGCGGGGCTACGCTACTATACGTAGCTACTGTACGTCCCGTC CCTACTTGACCGACCATGTACTGCGTCATTTATCGCCCTTTATCGCCCCT CGCTGACTACCGCTCGATGCCTACTTCTACATTCCCTCTACTGCCGATGA TTCTGCTGCTGCTGTTGCTGTGTTTTTTTTTTTGTTTGTTTTTTTCTCGG CTTATCAGGAGGTACTCGACGGCCTGGCCATCACGAACGACCACTTCAAG TACGCCCTGCAGCACTGCAACCCCTCCGCCCTGCGCGAGACGCTTGTCGA GGTCAGTGCTGAACATTACGCGGGCAATCCGTTCCGTTTCACCTGCCCCC TCCCCTCTCTAGAATTGTCTTGTACACGACGATTGTTGTGCTCGAAACGG TATATGCGCACTTGCGATTGTCCTCGAAACGGTATATAATACACTTGTGA TTGTCCTCGAAACGGTACATACACACTTCTGGTTGTGCTTGAAACGGTAT ACACTCGCTTAAGATTGCGCTCGATGTTTGAGCTGTGAATCGGCACAGCT TGAGTCACCAACTAGTTATCAGCCAGACCAAGAGTGTATTATTAGTCGTT TCTTCCGACTATCCGACTTGTAGGGTTTCCATTATTGCAAGAAATATTGT TTAATGCGGGATATATATATATATTTGTTATTTGGACGCCCCCTCCCTCT CGCGGGGCTGATTTGGCTCGCTTCGCCCGCCTGAGTTAAGTCGGCAAGTC GACTCGCCATCAGCTGGCTTCGTCAGCCGACTTGCCAACTAAAGCAAGTT AGTCGGCTAACGGCACCTACCGATTAATTATTAGTCGTGAAATCCTGTCG ACTGACTGCTTTATCAAGTACCATTCTGTACCGAATAATCTATAAAAACG TTTCTTGTATTCCGGGACAGAGTGGTAAAAAGTAGCTTACAGTAGCTTAC AGTAACTTATACTATGTATATAGGGTTCCCTGCAACCTTAAATTGACCGT CGACCTTTTTGTTCTTCTGATCGAGACAGGTGCCCAACGTGAGCTGGAAG GACGTGGGAGGCTTGGAGGACGTCAAGCGAGAGCTGCAGGAAACCGTCCA GGTGAAAATAAAGACGAAAATAGAAAGGGACGGTTACACACCTGGGGCAG ACAGATCATGATCTAGCTATCTCATATATCTACGGTAGATCATCTAGATC ATCCAGATCATCTAGTTCATCACCTGCCGTTGTCAGAGGTTTGTTGCAGG ATCTGCGTATTAATAGTTCAGATCAAACATGGGCTGTAAGTAGATCATGC AGACTCTATGGGGCCCACCTGGCAACATGAGCTAGGGCATTCAAGATTGG GAATAGATGATCTATCTGCCTTGTAAGATCTAGATCGTGAACTGTGGGAA TCGATGATCTGTACATGATCTGTCTGTCCGAGGTGTGGACGTTTGGTGTT CCTTTTCGCCCTTTTGATGGGAGGTGTTTCTGTAGCGTCGATGTGGATGA ACAACACAGTCAAATGTTGTCCCCCTCGAGCAGCCATAGTCTCCGTGCAC AGATTTACTATTGGCTGACCTGACAGTCAGGGCTGTTTACGGGTCATGAC CCGGCCCGCGCGGGTCGCGTGTCTGGAGGTCTTCAAAATACCACGGGTCG GGTCGGATCGGGCGAAGAGGTTTTTAATATCTATTGCGTCGGGTCGGAGT CGAGTTAGGAGGTCTTCAAAGCCTCACTCGTCGAGTCGGTTGGTGTTATA GGTGAGCCGACCCGACCCGACCCGCGAGTTTCGACCCGGCCCATCAACAG TCCGGATAAAATGGCAAAGTGATCGTGATCCCGTTGTCTCTGGTACCCAC CACCCCCGGGGGATCACCAACTTGTGTCCTTCACGAGGCCAATACACCCC GTAGCATGCCTAAAGACTGTATTGGTATACTCTAGCACAGGGGGCGGTAG TAATCAGGACCCGCGATGGACCCAAAGCACCATATATCCCTCTACTTTTA TATACCAAATTTGGTTCTGATATACTATCGTATGTTCCCTCGAAATATAT ACACTATACTCCTGTAGAACCAGGTTATAAAGTGGGTTGACTTTAATTCC CCAATGGTTGATTTTATTTTTATTTTGAGCGGTACCCAGTCGAGCACGCG GACAAGTTCAAGAAGGTTGGCATAAGCGCTTCTACCCCGCCCCGCACTCT AAACCTCAATCTAAAAACTGACGCCTAAAGACTACAGTCTCAAATTGACT GTCTCGCTTATCCCATGGTTGGTTTGTGTGCGAGCAATACCCTCTGGAAC ACGCAGACAGTTTTGTGATGTTCGGCATGAGCACTTCCATCCCCCACTCT TAATATCTAAATACTACCCCCCCCCCCCCCCTTCTGCCTGGTCGGTGAAA ACCTGACGCACTCTTGTAGGGGTGCAAGGGTCTACGGTCATACGACTACG CCCATGCGTGATGTCAGGAGTGCACTTCCCCTCCACACACACACACACAC ATTCTAAAGACTAACCCTGCCCCCAGCCCCTCAACCGTTTAAGCCCTCAG TTCTAGAGATCAACGTCGGTTAACTCACTCACCCCATGGTTGATTTGTTG GTCTTGAGCAGTACCCTGTGGAGCACGCGGACAAGTTTAAGAAGTTCGGC ATGAGCGCGTCTAAGGGGACTCTGTTCTACGGACCACCTGGGTGCGGGAA GACTTTGCTTGCCAAGGCCATCGCCAACGAGTGCGGGGCAAACTTCATCT CCGTCAAGGGTGAGACAAGCCGGCGGAACGTGGTCGTTTTTCTGTGGTCG ATCTGGTCGATAGTGTTTCGATTATTTGAGTCTAGTCGGTGTGTTTCCCA TGGTTGAGTCTGTTTGATGTGCTCTGATGGTTGAACCTGATGGGTGTGTT CCCATGGTTGGACCCTGGTCGATGTTTTGTGATCGTTGGGTCTGGTCGAT GTTTTGCTGGTTTAACCCCGTCGATACTTCGTGGTCGATGTGTTTCGGTA ATTGAACCTGGTCGATATCCCGATGGTTGAACCTGGTCGATGCTTCGATG GTGGGAGGTCGATGTGGTTCGATGGTTGAGCCCCTGGCCGATGCGTTTGG GTGTTGGAACTTAGTCGATGTGTTCCTATGGTTGAACCTAATTGATGCTT CGGTGCTAAATATAGTCGATGTGTTTCGATGGTTGGACGAGGTCGGTGTG TTTCTATGGTTGGACCTGGTACTTCGATGGTCGAATATGGTCAATTTTTT CAGTGGTTGAACCTGCTGGTCGATGTATTTGATGATTGACCCTGGCCTTT CGCCTCAATCCCTGCGTTGCCTCATTATCTACACGCTGCATATCGCGCTC AAAACATGTTGCAATCGCAGGCCCCGAGCTTCTCTCTATGTGGTTCGGAG AGTCTGAGGCAAACGTGCGCGAGCTTTTCGACAAGGCTCGTGCGGCAGCT CCTTGCATCCTGTTCTTCGACGAGATGGACTCCATCGCCAAG
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig13947:726..8317-

>mRNA_M-pyrifera_M_contig13947.6117.1 ID=mRNA_M-pyrifera_M_contig13947.6117.1|Name=mRNA_M-pyrifera_M_contig13947.6117.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2376bp|location=Sequence derived from alignment at M-pyrifera_M_contig13947:726..8317- (Macrocystis pyrifera P11B4 male)
TTCCAGCGTGACGACGATGAGAGCCTTAACGAGATTGGCTACGACGACAT
CGGGGGCTGCAAGCGCCAGCTGGCCCAGATCCGGGAGCTGATCGAGCTGC
CTCTGAGGCATCCTCAGCTCTTCAACGCCATCGGCATTCCCCCTCCAAGA
GGTGTCCTCATTTCCAGCGTGACGACGATGAGAGCCTTAACGAGATTGGC
TACGACGACATCGGGGGCTGCAAGCGCCAGCTGGCCCAGATCCGGGAGCT
GATCGAGCTGCCTCTGAGGCATCCTCAGCTCTTCAACGCCATCGGCATTC
CCCCTCCAAGAGGTGTCCTCATGTACGGACCTCCCGGATGCGGCAAGACG
ATGATCGCTCGCGCAGTAGCGTCGGAGACCGGCGCTTACTGCTTTACCAT
CAACGGGCCTGAGATCATGAGCAAGCTGTCCGGCGAGTCGGAGACGAACC
TGAGGAAGGCGTTTGAGGACGCCGAGGCTAACTCTCCCGCGATCATCTTC
ATCGACGAGATCGGTACGGACCTCCCGGATGCGGCAAGACGATGATCGCT
CGCGCAGTAGCGTCGGAGACCGGCGCTTACTGCTTTACCATCAACGGGCC
TGAGATCATGAGCAAGCTGTCCGGCGAGTCGGAGACGAACCTGAGGAAGG
CGTTTGAGGACGCCGAGGCTAACTCTCCCGCGATCATCTTCATCGACGAG
ATCGACTCAATCGCACCGCGAAGGGACAAGGCCGGCGGGGAGGTAGAGAA
GCGCATCGTGTCTCAGCTGCTCACCCTCATGGACGGCATCAAGCCCACGT
CGCACGTGGTGGTCATCGCGGCCACCAACAGGCCGAACGTGATCGAGCCG
GCCCTGAGGCGGTTCGGCAGGTTCGACCGCGAGCTGGACATCGGCATCCC
CGACGAGGAGGGGAGGCTGGAGGTCCTCAGGATCAAGACCCGTACCATGA
AGCTCGATGACGATGTTGACCTTATCCAGACTCAATCGCACCGCGAAGGG
ACAAGGCCGGCGGGGAGGTAGAGAAGCGCATCGTGTCTCAGCTGCTCACC
CTCATGGACGGCATCAAGCCCACGTCGCACGTGGTGGTCATCGCGGCCAC
CAACAGGCCGAACGTGATCGAGCCGGCCCTGAGGCGGTTCGGCAGGTTCG
ACCGCGAGCTGGACATCGGCATCCCCGACGAGGAGGGGAGGCTGGAGGTC
CTCAGGATCAAGACCCGTACCATGAAGCTCGATGACGATGTTGACCTTAT
CCAGGTCGCCAAGGACACGCACGGATTTGTGGGGGCCGATCTCTCCCAGC
TGTGCATGGAGGCCGCGCTGCGCTGCATCCGCGAGCAGATGCACACCATC
GACGTCGATGCTGACAAGATCCCCGTCGTCGCCAAGGACACGCACGGATT
TGTGGGGGCCGATCTCTCCCAGCTGTGCATGGAGGCCGCGCTGCGCTGCA
TCCGCGAGCAGATGCACACCATCGACGTCGATGCTGACAAGATCCCCGTC
GAGGTACTCGACGGCCTGGCCATCACGAACGACCACTTCAAGTACGCCCT
GCAGCACTGCAACCCCTCCGCCCTGCGCGAGACGCTTGTCGAGGAGGTAC
TCGACGGCCTGGCCATCACGAACGACCACTTCAAGTACGCCCTGCAGCAC
TGCAACCCCTCCGCCCTGCGCGAGACGCTTGTCGAGGTGCCCAACGTGAG
CTGGAAGGACGTGGGAGGCTTGGAGGACGTCAAGCGAGAGCTGCAGGAAA
CCGTCCAGGTGCCCAACGTGAGCTGGAAGGACGTGGGAGGCTTGGAGGAC
GTCAAGCGAGAGCTGCAGGAAACCGTCCAGCAGTACCCTGTGGAGCACGC
GGACAAGTTTAAGAAGTTCGGCATGAGCGCGTCTAAGGGGACTCTGTTCT
ACGGACCACCTGGGTGCGGGAAGACTTTGCTTGCCAAGGCCATCGCCAAC
GAGTGCGGGGCAAACTTCATCTCCGTCAAGGCAGTACCCTGTGGAGCACG
CGGACAAGTTTAAGAAGTTCGGCATGAGCGCGTCTAAGGGGACTCTGTTC
TACGGACCACCTGGGTGCGGGAAGACTTTGCTTGCCAAGGCCATCGCCAA
CGAGTGCGGGGCAAACTTCATCTCCGTCAAGGGCCCCGAGCTTCTCTCTA
TGTGGTTCGGAGAGTCTGAGGCAAACGTGCGCGAGCTTTTCGACAAGGCT
CGTGCGGCAGCTCCTTGCATCCTGTTCTTCGACGAGATGGACTCCATCGC
CAAGGCCCCGAGCTTCTCTCTATGTGGTTCGGAGAGTCTGAGGCAAACGT
GCGCGAGCTTTTCGACAAGGCTCGTGCGGCAGCTCCTTGCATCCTGTTCT
TCGACGAGATGGACTCCATCGCCAAG
back to top