mRNA_M-pyrifera_M_contig13911.6107.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig13911.6107.1 vs. uniprot
Match: A0A8D1CLN3_PIG (Uncharacterized protein n=1 Tax=Sus scrofa TaxID=9823 RepID=A0A8D1CLN3_PIG) HSP 1 Score: 237 bits (605), Expect = 8.930e-79 Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 1
Query: 34 MPPAPKSKKSSKKQTVKFVIDSHVPVADRVLDPASFEKFLHDRIKVNGKAGQLGDVVTITRERASITVTAQAPFSKRYLKYLTKKYLKKQQLRDYLHVIASNKNTYELRYFSIINDELAADEE 402
MPPAPKSKKSSKKQTVKFVIDSHVPVADRVLDPASFEKFLHDRIKVNGKAGQLGDVVTITRERASITVTAQAPFSKRYLKYLTKKYLKKQQLRDYLHVIASNKNTYELRYFSIINDELAADEE
Sbjct: 1 MPPAPKSKKSSKKQTVKFVIDSHVPVADRVLDPASFEKFLHDRIKVNGKAGQLGDVVTITRERASITVTAQAPFSKRYLKYLTKKYLKKQQLRDYLHVIASNKNTYELRYFSIINDELAADEE 123
BLAST of mRNA_M-pyrifera_M_contig13911.6107.1 vs. uniprot
Match: A0A6H5L046_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L046_9PHAE) HSP 1 Score: 214 bits (545), Expect = 1.250e-69 Identity = 109/123 (88.62%), Postives = 114/123 (92.68%), Query Frame = 1
Query: 34 MPPAPKSKKSSKKQTVKFVIDSHVPVADRVLDPASFEKFLHDRIKVNGKAGQLGDVVTITRERASITVTAQAPFSKRYLKYLTKKYLKKQQLRDYLHVIASNKNTYELRYFSIINDELAADEE 402
MPPAPKSKK SKKQTVKFVID +PV DRVLDP+SFEKFLHDRIKVNGKAGQLGD VTI RE+A ITVTAQAPFSKRYLKYLTKKYLKKQQLRDYLHVIASNKNTYELRYFSI+ND+ ADEE
Sbjct: 1 MPPAPKSKKCSKKQTVKFVIDCFIPVEDRVLDPSSFEKFLHDRIKVNGKAGQLGDAVTIAREKARITVTAQAPFSKRYLKYLTKKYLKKQQLRDYLHVIASNKNTYELRYFSIVNDQQEADEE 123
BLAST of mRNA_M-pyrifera_M_contig13911.6107.1 vs. uniprot
Match: A0A835Z6N6_9STRA (Ribosomal protein L22e n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6N6_9STRA) HSP 1 Score: 171 bits (433), Expect = 1.540e-52 Identity = 89/125 (71.20%), Postives = 100/125 (80.00%), Query Frame = 1
Query: 34 MPPAPKSKKSSKKQTVKFVIDSHVPVADRVLDPASFEKFLHDRIKVNGKAGQLGDVVTITRERASITVTAQAPFSKRYLKYLTKKYLKKQQLRDYLHVIASNKNTYELRYFSII--NDELAADEE 402
MP APK KK+SK +T KF ID HVPV D VLDPA+FEKF+HDRIKVNGKAG LGD VTITRE + V AQ PFSKRYLKYLTKKYLKKQ LRDYL V+A+ K+TYE+RYFSI D AA+E+
Sbjct: 1 MPAAPKGKKASKVKTAKFTIDCHVPVGDSVLDPANFEKFMHDRIKVNGKAGDLGDAVTITREADRLVVVAQLPFSKRYLKYLTKKYLKKQSLRDYLRVVATKKDTYEMRYFSIAADGDADAAEED 125
BLAST of mRNA_M-pyrifera_M_contig13911.6107.1 vs. uniprot
Match: A0A024UQN7_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces TaxID=100860 RepID=A0A024UQN7_9STRA) HSP 1 Score: 167 bits (422), Expect = 7.050e-51 Identity = 88/124 (70.97%), Postives = 102/124 (82.26%), Query Frame = 1
Query: 34 MPPAPKSKKSSKKQTVKFVIDSHVPVADRVLDPASFEKFLHDRIKVNGKAGQLGDVVTITRERASITVTAQAPFSKRYLKYLTKKYLKKQQLRDYLHVIASNKNTYELRYFSIIN-DELAADEE 402
M PA K ++ KK +KF ID+ +PV D+VLD ASFEKFLHDRIKVNGK G LGDV+TITRE+ + + AQAPFSKRYLKYLTKKYLKKQQLRDYLHVIAS+K+TYELRYF+I N + ADEE
Sbjct: 1 MAPANKKTQAGKKTVLKFTIDATIPVDDQVLDVASFEKFLHDRIKVNGKTGVLGDVITITREKTKLHIAAQAPFSKRYLKYLTKKYLKKQQLRDYLHVIASDKSTYELRYFNIHNAKDDDADEE 124
BLAST of mRNA_M-pyrifera_M_contig13911.6107.1 vs. uniprot
Match: M4BIK4_HYAAE (Uncharacterized protein n=7 Tax=Peronosporaceae TaxID=4777 RepID=M4BIK4_HYAAE) HSP 1 Score: 167 bits (422), Expect = 7.270e-51 Identity = 88/123 (71.54%), Postives = 98/123 (79.67%), Query Frame = 1
Query: 34 MPPAPKSKKSSKKQTVKFVIDSHVPVADRVLDPASFEKFLHDRIKVNGKAGQLGDVVTITRERASITVTAQAPFSKRYLKYLTKKYLKKQQLRDYLHVIASNKNTYELRYFSIINDELAADEE 402
M P K+KK SKKQ +KF ID +PV D VLDPASFEKFLHDRIKV GK G LGD +TITRE+ + V A PFSKRYLKYLTKKYLKKQQLRDYLHVIAS+KNTYELRYF+I + A+EE
Sbjct: 1 MAPPHKTKKISKKQQLKFTIDCTIPVDDHVLDPASFEKFLHDRIKVGGKTGVLGDSITITREKTKLQVAAVPPFSKRYLKYLTKKYLKKQQLRDYLHVIASDKNTYELRYFNIHDAGNDAEEE 123
BLAST of mRNA_M-pyrifera_M_contig13911.6107.1 vs. uniprot
Match: H3GXW9_PHYRM (Uncharacterized protein n=17 Tax=Peronosporaceae TaxID=4777 RepID=H3GXW9_PHYRM) HSP 1 Score: 166 bits (419), Expect = 2.080e-50 Identity = 87/123 (70.73%), Postives = 97/123 (78.86%), Query Frame = 1
Query: 34 MPPAPKSKKSSKKQTVKFVIDSHVPVADRVLDPASFEKFLHDRIKVNGKAGQLGDVVTITRERASITVTAQAPFSKRYLKYLTKKYLKKQQLRDYLHVIASNKNTYELRYFSIINDELAADEE 402
M PA K KK SKKQ +KF ID +PV D VLDPASFEKFLHDRIKV GK G LG+ + ITRE+ + V A PFSKRYLKYLTKKYLKKQQLRDYLHVIAS+KNTYELRYF+I + ADE+
Sbjct: 1 MAPAHKGKKVSKKQLLKFTIDCTIPVDDHVLDPASFEKFLHDRIKVGGKTGVLGEAIKITREKTKLQVVAVPPFSKRYLKYLTKKYLKKQQLRDYLHVIASDKNTYELRYFNIHDAGNDADED 123
BLAST of mRNA_M-pyrifera_M_contig13911.6107.1 vs. uniprot
Match: A0A0N7L406_PLAHL (60s ribosomal protein l22 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L406_PLAHL) HSP 1 Score: 162 bits (409), Expect = 7.140e-49 Identity = 83/118 (70.34%), Postives = 95/118 (80.51%), Query Frame = 1
Query: 49 KSKKSSKKQTVKFVIDSHVPVADRVLDPASFEKFLHDRIKVNGKAGQLGDVVTITRERASITVTAQAPFSKRYLKYLTKKYLKKQQLRDYLHVIASNKNTYELRYFSIINDELAADEE 402
K KK SKKQ +KF ID +PV D VLDPASFEKFLHDRIK+NGK G LG+ V ITRE+ + + A PFSKRYLKYLTKKYLKKQQLRDYLHVIAS+K+TYELRYF+I + ADE+
Sbjct: 7 KGKKISKKQLLKFTIDCTIPVDDHVLDPASFEKFLHDRIKINGKTGVLGESVKITREKTKLQIVAMPPFSKRYLKYLTKKYLKKQQLRDYLHVIASDKSTYELRYFNIHDAGNDADED 124
BLAST of mRNA_M-pyrifera_M_contig13911.6107.1 vs. uniprot
Match: K3WA34_GLOUD (Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WA34_GLOUD) HSP 1 Score: 161 bits (408), Expect = 1.050e-48 Identity = 85/120 (70.83%), Postives = 96/120 (80.00%), Query Frame = 1
Query: 43 APKSKKSSKKQTVKFVIDSHVPVADRVLDPASFEKFLHDRIKVNGKAGQLGDVVTITRERASITVTAQAPFSKRYLKYLTKKYLKKQQLRDYLHVIASNKNTYELRYFSIINDELAADEE 402
A K KK KKQ +KF ID +PV DRVLDPASFEKFLHDRIKV GK G LGD V I+RE+ + V A APFSKRYLKYLTKKYLKKQQLRDYLHVIAS+K+TYELRYF+I + AD++
Sbjct: 6 ANKGKKVGKKQVLKFTIDCTIPVDDRVLDPASFEKFLHDRIKVGGKVGVLGDAVKISREKNKLHVAAVAPFSKRYLKYLTKKYLKKQQLRDYLHVIASDKHTYELRYFNIHDGGNDADDD 125
BLAST of mRNA_M-pyrifera_M_contig13911.6107.1 vs. uniprot
Match: A0A662WKT4_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WKT4_9STRA) HSP 1 Score: 161 bits (408), Expect = 1.150e-48 Identity = 85/120 (70.83%), Postives = 95/120 (79.17%), Query Frame = 1
Query: 43 APKSKKSSKKQTVKFVIDSHVPVADRVLDPASFEKFLHDRIKVNGKAGQLGDVVTITRERASITVTAQAPFSKRYLKYLTKKYLKKQQLRDYLHVIASNKNTYELRYFSIINDELAADEE 402
A K KK KKQ +KF ID +PV D VLDPASFEKFLHDRIKV GKAG LGD V ITRE+ + V A PFSKRYLKYLTKKYLKKQQLRDYLHVIAS+K+TYELRYF+I + AD++
Sbjct: 9 ANKGKKVGKKQLLKFTIDCTIPVDDHVLDPASFEKFLHDRIKVGGKAGVLGDAVKITREKTKLQVVAVPPFSKRYLKYLTKKYLKKQQLRDYLHVIASDKHTYELRYFNIHDGGNDADDD 128
BLAST of mRNA_M-pyrifera_M_contig13911.6107.1 vs. uniprot
Match: A0A067CEX9_SAPPC (Uncharacterized protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CEX9_SAPPC) HSP 1 Score: 160 bits (406), Expect = 1.980e-48 Identity = 88/125 (70.40%), Postives = 101/125 (80.80%), Query Frame = 1
Query: 34 MPPAPKSK-KSSKKQTVKFVIDSHVPVADRVLDPASFEKFLHDRIKVNGKAGQLGDVVTITRERASITVTAQAPFSKRYLKYLTKKYLKKQQLRDYLHVIASNKNTYELRYFSIIND-ELAADEE 402
M PA K+ K+ KK +KF ID PV D+VLD ASFEKFLHDRIKVNGK G LGDVVTI+RE+ + + A APFSKRYLKYLTKKYLKKQQLRDYLHVIAS+K+TYELRYF+I N+ + ADEE
Sbjct: 1 MAPATKTAPKTGKKNLLKFTIDCSTPVEDQVLDVASFEKFLHDRIKVNGKTGVLGDVVTISREKTKLHIAAVAPFSKRYLKYLTKKYLKKQQLRDYLHVIASDKSTYELRYFNIHNNKDEDADEE 125 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig13911.6107.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig13911.6107.1 >prot_M-pyrifera_M_contig13911.6107.1 ID=prot_M-pyrifera_M_contig13911.6107.1|Name=mRNA_M-pyrifera_M_contig13911.6107.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=124bp MPPAPKSKKSSKKQTVKFVIDSHVPVADRVLDPASFEKFLHDRIKVNGKAback to top mRNA from alignment at M-pyrifera_M_contig13911:3641..6925+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig13911.6107.1 ID=mRNA_M-pyrifera_M_contig13911.6107.1|Name=mRNA_M-pyrifera_M_contig13911.6107.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=3285bp|location=Sequence derived from alignment at M-pyrifera_M_contig13911:3641..6925+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig13911:3641..6925+ >mRNA_M-pyrifera_M_contig13911.6107.1 ID=mRNA_M-pyrifera_M_contig13911.6107.1|Name=mRNA_M-pyrifera_M_contig13911.6107.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=744bp|location=Sequence derived from alignment at M-pyrifera_M_contig13911:3641..6925+ (Macrocystis pyrifera P11B4 male)back to top |