mRNA_M-pyrifera_M_contig1390.6101.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig1390.6101.1 vs. uniprot
Match: D8LC23_ECTSI (Glyco_transf_41 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC23_ECTSI) HSP 1 Score: 406 bits (1044), Expect = 1.260e-135 Identity = 214/358 (59.78%), Postives = 245/358 (68.44%), Query Frame = 1
Query: 1 MVVTLPEVRPADAATAYCNHGHIVQTRAGADYSLLEEGIALFQRGLEKAPGHANCMYNLGLGMEKFGRYPEAKHLYVRSLELNPSMGNAHLNIGNIAFRAGRWEEGISRYNSAYSSPDADQRLRTVSSFMLGQARTLRFDFFGIYRHGIGNVRKGVEFYKRSYAIDNDYSQALGCILQSLRSLCLWEGWEFLEAQMASAIVNEVAAGSEPGPQSPYETRLTGELKPSQHLGLARLASMSYDRVARLSLPSDHDSV----PPPPTNLGGGLS-------------GAWRGDGSRFETGVVAGLEQAELRRRGXXXXXXXXXXXXGQASSRGLAVAYWSYDYREHPMGHLTRGLFCSHQA 1023
+V+ LP P + A+AYCNHGH+VQTRAG DY+LL EGI+LFQRGLE+ P H+ C+YN GLGMEK GRYPEAK+LY R++ L+P MGNAHLN+GNIAFR W EGI Y A+ SPDADQRL TVSSFMLGQ ++RHGIGNVRK VE+YKRSY DN Y AL ILQSLRSLCLWEGWE LE ++ASAI+++V++G EPGPQSPYETRLTGELKPSQHLGLARLAS +DRV RL LP DH G GL G GDG+ E G G A +RRR A+ GL VAYWSYDYR+H MGHLTRGLFCSHQA
Sbjct: 83 VVIKLPNALPIEVASAYCNHGHLVQTRAGEDYALLAEGISLFQRGLERVPDHSTCLYNFGLGMEKLGRYPEAKNLYTRAVGLDPFMGNAHLNLGNIAFRQANWTEGILCYERAHQSPDADQRLLTVSSFMLGQ----------LHRHGIGNVRKAVEYYKRSYDTDNTYKDALCAILQSLRSLCLWEGWESLEPRVASAIMDQVSSGKEPGPQSPYETRLTGELKPSQHLGLARLASQQFDRVERLPLPEDHTRRLSFRQGEALGQGRGLQQDSISFDEWLRRQGIEAGDGNGEEAGPRGG---ASVRRRA--------------AAGGGLVVAYWSYDYRDHAMGHLTRGLFCSHQA 413 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1390.6101.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig1390.6101.1 >prot_M-pyrifera_M_contig1390.6101.1 ID=prot_M-pyrifera_M_contig1390.6101.1|Name=mRNA_M-pyrifera_M_contig1390.6101.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=348bp MVVTLPEVRPADAATAYCNHGHIVQTRAGADYSLLEEGIALFQRGLEKAPback to top mRNA from alignment at M-pyrifera_M_contig1390:777..10656+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig1390.6101.1 ID=mRNA_M-pyrifera_M_contig1390.6101.1|Name=mRNA_M-pyrifera_M_contig1390.6101.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=9880bp|location=Sequence derived from alignment at M-pyrifera_M_contig1390:777..10656+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig1390:777..10656+ >mRNA_M-pyrifera_M_contig1390.6101.1 ID=mRNA_M-pyrifera_M_contig1390.6101.1|Name=mRNA_M-pyrifera_M_contig1390.6101.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2088bp|location=Sequence derived from alignment at M-pyrifera_M_contig1390:777..10656+ (Macrocystis pyrifera P11B4 male)back to top |