mRNA_M-pyrifera_M_contig13793.6075.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig13793.6075.1
Unique NamemRNA_M-pyrifera_M_contig13793.6075.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig13793.6075.1 vs. uniprot
Match: D8LIP7_ECTSI (DEAD box helicase DEAD/DEAH box helicase-like protein (Partial) (Fragment) n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIP7_ECTSI)

HSP 1 Score: 411 bits (1057), Expect = 1.390e-137
Identity = 213/248 (85.89%), Postives = 220/248 (88.71%), Query Frame = 1 
Query:    1 KAMDFDSYGLNPRLQQQLRKVGVDKFFPVQAQCFEKVVNGQDLMCKSRTGSGKTLAFAIPIIEALDRQSQGEAVQSQRGGRGRHFSRGARGRLPRAICVAPTRELAKQVEREFNRIAPELSSLAVYGGTALGPQIGEMRRGVDIIVGTPGRIIDHISQGNLNLSEIQFCVLDEADLMLQMGFQEPVEEIFKEMPDNKQTTLWSATMPRD---------RLGAEPLHGGLTQAAREACLGRFRSGRTKV 717
            K+MDFDSYGLN RLQ+QLRKVGVD+FFPVQAQCFEKVV+GQDLMCKSRTGSGKTLAFAIPIIEALDRQS GE+VQ      GR FSRGA GR PRAICVAPTRELAKQVEREFNRIAPELSSLAVYGGTA GPQIGEMRRGVDIIVGTPGRIIDHI QGNLNLSEIQFCVLDEADLMLQMGFQEPVEEIFKEMP+NKQTTLWS     D         RLGAE LHGGLTQAAREACLGRFRSGRTK+
Sbjct:  185 KSMDFDSYGLNQRLQRQLRKVGVDQFFPVQAQCFEKVVSGQDLMCKSRTGSGKTLAFAIPIIEALDRQSGGESVQRXXXXXGRLFSRGAYGRFPRAICVAPTRELAKQVEREFNRIAPELSSLAVYGGTAQGPQIGEMRRGVDIIVGTPGRIIDHIEQGNLNLSEIQFCVLDEADLMLQMGFQEPVEEIFKEMPENKQTTLWSTKAEVDELCTHPALSRLGAEALHGGLTQAAREACLGRFRSGRTKM 432
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BLAST of mRNA_M-pyrifera_M_contig13793.6075.1 vs. uniprot
Match: A0A835YGZ8_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGZ8_9STRA)

HSP 1 Score: 218 bits (554), Expect = 1.940e-62
Identity = 131/318 (41.19%), Postives = 171/318 (53.77%), Query Frame = 1 
Query:    4 AMDFDSYGLNPRLQQQLRKVGVDKFFPVQAQCFEKVVNGQDLMCKSRTGSGKTLAFAIPIIEALDRQSQGEAVQSQRGGRGRHFSRGARGRLPRAICVAPTRELAKQVEREFNRIAPELSSLAVYGGTALGPQIGEMRRGVDIIVGTPGRIIDHISQGNLNLSEIQFCVLDEADLMLQMGFQEPVEEIFKEMP--DNKQTTLWSATMP---------------------------------------RDR---------------------------------------LGAEPLHGGLTQAAREACLGRFRSGRTKV 717
            A D   + L+PRL + L + G++  FPVQ++CF+ +++G+D++CKSRTGSGKTLAFAIPIIE+++R+ +                   RGR P AI V PTRELAKQV+REF R+AP+L SL+VYGG+ +  Q+  +R GVD++VGTPGR+ID +    L+L+  +F VLDEAD MLQMGFQ+ VE+IF  MP    +QT LWSATMP                                       RD                                        +GAE LHGGL Q ARE  L RFR GRT+V
Sbjct:  103 ARDLGEFDLSPRLSRSLAESGINSLFPVQSRCFDLIMSGKDMICKSRTGSGKTLAFAIPIIESIEREGRPPR----------------RGRKPVAIVVTPTRELAKQVQREFERVAPQLQSLSVYGGSPVQAQVAALRGGVDVVVGTPGRVIDLLESRALDLNASRFAVLDEADQMLQMGFQDDVEKIFGFMPAAGARQTMLWSATMPAWVHKIGRKYLQEPEFIDLVGADDVKIPATIDHWAIAASRDTRAEVLALVCSVYGHNKRVLVFSRTKAEVDELVMLPALAGMGAEALHGGLAQEARERTLQRFREGRTRV 404
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BLAST of mRNA_M-pyrifera_M_contig13793.6075.1 vs. uniprot
Match: A0A7S0QES0_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QES0_9CRYP)

HSP 1 Score: 196 bits (497), Expect = 1.250e-57
Identity = 96/205 (46.83%), Postives = 144/205 (70.24%), Query Frame = 1 
Query:   13 FDSYGLNPRLQQQLRKVGVDKFFPVQAQCFEKVVNGQDLMCKSRTGSGKTLAFAIPIIEALDRQSQGEAVQSQRGGRGRHFSRGARGRLPRAICVAPTRELAKQVEREFNRIAPELSSLAVYGGTALGPQIGEMRRGVDIIVGTPGRIIDHISQGNLNLSEIQFCVLDEADLMLQMGFQEPVEEIFKEMPDN-KQTTLWSATMPR 624
             +++ ++   +++L+++G+ + FPVQA+ F  +++G+D++ +SRTGSGKT+ FA+P++E L +              G H    ARGR PR I +APTRELA Q+ REF RI P+LS++ +YGG +  PQ   +RRGVD++VGTPGR+ DH+++G L L +++  +LDEAD ML+MGFQE VE I K +P+  +QT LWSATMPR
Sbjct:  100 LENFPISVATKERLKEMGILQLFPVQAKSFSALMDGKDMVVRSRTGSGKTIGFALPVVEKLIK--------------GDHS---ARGRKPRCIVLAPTRELAVQIHREFERIGPQLSTVCIYGGASYIPQESALRRGVDVVVGTPGRVTDHMNKGTLMLDQVKIFILDEADEMLKMGFQEDVENIMKSVPEQGRQTNLWSATMPR 287
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BLAST of mRNA_M-pyrifera_M_contig13793.6075.1 vs. uniprot
Match: L1IQZ7_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IQZ7_GUITC)

HSP 1 Score: 196 bits (497), Expect = 3.330e-57
Identity = 93/205 (45.37%), Postives = 145/205 (70.73%), Query Frame = 1 
Query:    7 MDFDSYGLNPRLQQQLRKVGVDKFFPVQAQCFEKVVNGQDLMCKSRTGSGKTLAFAIPIIEALDRQSQGEAVQSQRGGRGRHFSRGARGRLPRAICVAPTRELAKQVEREFNRIAPELSSLAVYGGTALGPQIGEMRRGVDIIVGTPGRIIDHISQGNLNLSEIQFCVLDEADLMLQMGFQEPVEEIFKEMPDNKQTTLWSATMP 621
            M+ +   L+ +++ +L++ G+   FPVQ + F+ +++G+D++ +SRTGSGKT+AFA+P+IE +       A ++++            GRLP  + +APTRELA Q++REF RI PE++S  VYGG ++G Q+  +R+GVD++VGTPGR+IDH+  G L++S ++  +LDEAD ML+MGFQ+ VE I + +P +KQT LWSATMP
Sbjct:    1 MNLEEVPLSKKVKAKLKECGITSLFPVQVKTFQTLMDGKDVVVRSRTGSGKTIAFALPVIEKI------LANKTRK-----------HGRLPSCLVIAPTRELAIQIDREFTRIQPEVASTCVYGGVSIGMQVSALRKGVDVVVGTPGRLIDHLVNGTLDVSAVETFILDEADEMLKMGFQDDVERIIEYLPPSKQTNLWSATMP 188
[Close]
BLAST of mRNA_M-pyrifera_M_contig13793.6075.1 vs. uniprot
Match: A0A7S0UG13_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0UG13_HEMAN)

HSP 1 Score: 194 bits (493), Expect = 2.470e-55
Identity = 97/203 (47.78%), Postives = 137/203 (67.49%), Query Frame = 1 
Query:   13 FDSYGLNPRLQQQLRKVGVDKFFPVQAQCFEKVVNGQDLMCKSRTGSGKTLAFAIPIIEALDRQSQGEAVQSQRGGRGRHFSRGARGRLPRAICVAPTRELAKQVEREFNRIAPELSSLAVYGGTALGPQIGEMRRGVDIIVGTPGRIIDHISQGNLNLSEIQFCVLDEADLMLQMGFQEPVEEIFKEMPDNKQTTLWSATMP 621
             D +G++   Q+ LRK+GV+K FPVQ Q FE ++ G+D++ KSRTGSGKT+AF +P++E L        +Q+         S   RGR PR + +APTRELA Q++RE  ++ P L++ A+YGG     Q   +R+GVDI+VGTPGR++D I +G+L L  +Q  +LDEAD ML+MGFQE VE I   +P+ +QT LWSAT+P
Sbjct:  114 LDKFGISEETQRALRKMGVEKLFPVQIQTFEALMGGKDMVVKSRTGSGKTIAFGLPVVETL--------LQTN--------SERDRGRHPRCLVLAPTRELALQIQREMVKVGPRLTTAAIYGGAPYTTQENILRQGVDIVVGTPGRVMDMIDKGSLMLDSVQMFILDEADEMLKMGFQEDVERIMTSVPEVRQTNLWSATVP 300
[Close]
BLAST of mRNA_M-pyrifera_M_contig13793.6075.1 vs. uniprot
Match: A0A2N9FKT2_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9FKT2_FAGSY)

HSP 1 Score: 194 bits (494), Expect = 7.970e-55
Identity = 97/207 (46.86%), Postives = 141/207 (68.12%), Query Frame = 1 
Query:    1 KAMDFDSYGLNPRLQQQLRKVGVDKFFPVQAQCFEKVVNGQDLMCKSRTGSGKTLAFAIPIIEALDRQSQGEAVQSQRGGRGRHFSRGARGRLPRAICVAPTRELAKQVEREFNRIAPELSSLAVYGGTALGPQIGEMRRGVDIIVGTPGRIIDHISQGNLNLSEIQFCVLDEADLMLQMGFQEPVEEIFKEMPDNKQTTLWSATMP 621
            + +D    G++P +   L K G+ K FP+Q    E  + G+D++ ++RTG+GKTLAF IPI++ + + +                ++  RGR P AIC+APTRELAKQVE+EF   AP L ++ VYGGT +  Q+ ++  GVD+ VGTPGRIID +++G LNLSE++F VLDEAD MLQ+GFQE VE+I +++P+ +QT ++SATMP
Sbjct:  111 EGLDISKLGISPEIVSALSKRGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKILQYN----------------AKHGRGRNPLAICLAPTRELAKQVEKEFAESAPGLDTICVYGGTPISQQMRQLDYGVDVAVGTPGRIIDLLNRGALNLSEVKFVVLDEADQMLQVGFQEDVEKILEKLPEKRQTLMFSATMP 301
[Close]
BLAST of mRNA_M-pyrifera_M_contig13793.6075.1 vs. uniprot
Match: A0A7S4HA65_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4HA65_GUITH)

HSP 1 Score: 196 bits (497), Expect = 1.230e-54
Identity = 93/204 (45.59%), Postives = 144/204 (70.59%), Query Frame = 1 
Query:   10 DFDSYGLNPRLQQQLRKVGVDKFFPVQAQCFEKVVNGQDLMCKSRTGSGKTLAFAIPIIEALDRQSQGEAVQSQRGGRGRHFSRGARGRLPRAICVAPTRELAKQVEREFNRIAPELSSLAVYGGTALGPQIGEMRRGVDIIVGTPGRIIDHISQGNLNLSEIQFCVLDEADLMLQMGFQEPVEEIFKEMPDNKQTTLWSATMP 621
            D +   L+ +++ +L++ G+   FPVQ + F+ +++G+D++ +SRTGSGKT+AFA+P+IE +       A ++++            GRLP  + +APTRELA Q++REF RI PE++S  VYGG ++G Q+  +R+GVD++VGTPGR+IDH+  G L++S ++  +LDEAD ML+MGFQ+ VE I + +P +KQT LWSATMP
Sbjct:  105 DLEEVPLSKKVKAKLKECGITSLFPVQVKTFQTLMDGKDVVVRSRTGSGKTIAFALPVIEKI------LANKTRK-----------HGRLPSCLVIAPTRELAIQIDREFTRIQPEVASTCVYGGVSIGMQVSALRKGVDVVVGTPGRLIDHLVNGTLDVSAVETFILDEADEMLKMGFQDDVERIIEYLPPSKQTNLWSATMP 291
[Close]
BLAST of mRNA_M-pyrifera_M_contig13793.6075.1 vs. uniprot
Match: A0A7J8YCU7_GOSAI (Uncharacterized protein n=1 Tax=Gossypium aridum TaxID=34290 RepID=A0A7J8YCU7_GOSAI)

HSP 1 Score: 186 bits (472), Expect = 1.570e-54
Identity = 93/207 (44.93%), Postives = 137/207 (66.18%), Query Frame = 1 
Query:    1 KAMDFDSYGLNPRLQQQLRKVGVDKFFPVQAQCFEKVVNGQDLMCKSRTGSGKTLAFAIPIIEALDRQSQGEAVQSQRGGRGRHFSRGARGRLPRAICVAPTRELAKQVEREFNRIAPELSSLAVYGGTALGPQIGEMRRGVDIIVGTPGRIIDHISQGNLNLSEIQFCVLDEADLMLQMGFQEPVEEIFKEMPDNKQTTLWSATMP 621
            +A++  + G+ P +   L+  G+ K FP+Q    E  + G+D++ +++TG+GKTLAF IPI++ + R +                ++  RGR P  + +APTRELAKQVE+EF+  AP L ++ VYGGT +  Q+ ++  GVD+ VGTPGRIID + +G LNLSE+QF VLDEAD MLQ+GF E VE I + +P N+Q+ ++SATMP
Sbjct:   95 EALEISNLGIAPEIVSALKNRGITKLFPIQRAVLEPAMQGRDMIGRAKTGTGKTLAFGIPIMDKIIRYN----------------AKHGRGRNPMCLVLAPTRELAKQVEKEFHESAPNLDTICVYGGTPISRQMRQLDYGVDVAVGTPGRIIDLLKRGALNLSEVQFLVLDEADQMLQVGFAEDVETILERLPANRQSMMFSATMP 285
[Close]
BLAST of mRNA_M-pyrifera_M_contig13793.6075.1 vs. uniprot
Match: A0A7S1EEL6_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1EEL6_HEMAN)

HSP 1 Score: 194 bits (493), Expect = 2.420e-54
Identity = 97/203 (47.78%), Postives = 137/203 (67.49%), Query Frame = 1 
Query:   13 FDSYGLNPRLQQQLRKVGVDKFFPVQAQCFEKVVNGQDLMCKSRTGSGKTLAFAIPIIEALDRQSQGEAVQSQRGGRGRHFSRGARGRLPRAICVAPTRELAKQVEREFNRIAPELSSLAVYGGTALGPQIGEMRRGVDIIVGTPGRIIDHISQGNLNLSEIQFCVLDEADLMLQMGFQEPVEEIFKEMPDNKQTTLWSATMP 621
             D +G++   Q+ LRK+GV+K FPVQ Q FE ++ G+D++ KSRTGSGKT+AF +P++E L        +Q+         S   RGR PR + +APTRELA Q++RE  ++ P L++ A+YGG     Q   +R+GVDI+VGTPGR++D I +G+L L  +Q  +LDEAD ML+MGFQE VE I   +P+ +QT LWSAT+P
Sbjct:  107 LDKFGISEETQRALRKMGVEKLFPVQIQTFEALMGGKDMVVKSRTGSGKTIAFGLPVVETL--------LQTN--------SERDRGRHPRCLVLAPTRELALQIQREMVKVGPRLTTAAIYGGAPYTTQENILRQGVDIVVGTPGRVMDMIDKGSLMLDSVQMFILDEADEMLKMGFQEDVERIMTSVPEVRQTNLWSATVP 293
[Close]
BLAST of mRNA_M-pyrifera_M_contig13793.6075.1 vs. uniprot
Match: Q1J0S9_DEIGD (RNA helicase n=5 Tax=Deinococcus TaxID=1298 RepID=Q1J0S9_DEIGD)

HSP 1 Score: 192 bits (487), Expect = 5.530e-54
Identity = 109/248 (43.95%), Postives = 156/248 (62.90%), Query Frame = 1 
Query:    7 MDFDSYGLNPRLQQQLRKVGVDKFFPVQAQCFEKVVNGQDLMCKSRTGSGKTLAFAIPIIEALDRQSQGEAVQSQRGGRGRHFSRGARGRLPRAICVAPTRELAKQVEREFNRIAPELSSLAVYGGTALGPQIGEMRRGVDIIVGTPGRIIDHISQGNLNLSEIQFCVLDEADLMLQMGFQEPVEEIFKEMPDNKQTTLWSATMP-----------RDRLGAEPLHGGLTQAAREACLGRFRSGRTKV 717
            M+FD   + P L  +L + G+ +  P+QA+     + G+DL+ ++RTG+GKTLAFA+PII+ L            RG R        RGRLPRAI +APTRELAKQV  EF++  P+LS++ VYGG A GPQ   +RRGVD++VGTPGR+IDH+ +GNL+LS IQ+ VLDEAD ML +GF + +E I ++ P  +QT L+SAT+            R+ +  + +  G +QAA+     + + GRT+ 
Sbjct:    1 MNFDQL-IAPELAARLAERGITEASPIQAESLPHTLAGKDLIGRARTGTGKTLAFALPIIQNL-------TAPDGRGSR-------ERGRLPRAIVIAPTRELAKQVAEEFSKSGPQLSTVTVYGGAAYGPQENALRRGVDVVVGTPGRLIDHLERGNLDLSAIQYAVLDEADEMLSVGFADAIETILQQTPAARQTMLFSATLNDEIHRLARKYLREPVVVDLVGEGKSQAAQSVEHLKVKVGRTRT 233
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig13793.6075.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LIP7_ECTSI1.390e-13785.89DEAD box helicase DEAD/DEAH box helicase-like prot... [more]
A0A835YGZ8_9STRA1.940e-6241.19P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S0QES0_9CRYP1.250e-5746.83Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]
L1IQZ7_GUITC3.330e-5745.37Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
A0A7S0UG13_HEMAN2.470e-5547.78Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A2N9FKT2_FAGSY7.970e-5546.86Uncharacterized protein n=1 Tax=Fagus sylvatica Ta... [more]
A0A7S4HA65_GUITH1.230e-5445.59Hypothetical protein n=1 Tax=Guillardia theta TaxI... [more]
A0A7J8YCU7_GOSAI1.570e-5444.93Uncharacterized protein n=1 Tax=Gossypium aridum T... [more]
A0A7S1EEL6_HEMAN2.420e-5447.78Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
Q1J0S9_DEIGD5.530e-5443.95RNA helicase n=5 Tax=Deinococcus TaxID=1298 RepID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig13793contigM-pyrifera_M_contig13793:752..8542 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score411.4
Seed ortholog evalue2.9e-112
Seed eggNOG ortholog2880.D8LIP7
KEGG koko:K16911
KEGG Pathwayko01110,map01110
Hectar predicted targeting categoryother localisation
EggNOG free text desc.helicase activity
EggNOG OGsCOG0513@1,KOG0331@2759
EC3.6.4.13
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03009,ko03036
Exons6
Model size720
Cds size714
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815826.6119168-CDS-M-pyrifera_M_contig13793:751..8451622815826.6119168-CDS-M-pyrifera_M_contig13793:751..845Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13793 752..845 -
1692277591.610664-CDS-M-pyrifera_M_contig13793:751..8451692277591.610664-CDS-M-pyrifera_M_contig13793:751..845Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13793 752..845 -
1622815826.622099-CDS-M-pyrifera_M_contig13793:4468..46051622815826.622099-CDS-M-pyrifera_M_contig13793:4468..4605Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13793 4469..4605 -
1692277591.625391-CDS-M-pyrifera_M_contig13793:4468..46051692277591.625391-CDS-M-pyrifera_M_contig13793:4468..4605Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13793 4469..4605 -
1622815826.6318557-CDS-M-pyrifera_M_contig13793:5815..59801622815826.6318557-CDS-M-pyrifera_M_contig13793:5815..5980Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13793 5816..5980 -
1692277591.6383302-CDS-M-pyrifera_M_contig13793:5815..59801692277591.6383302-CDS-M-pyrifera_M_contig13793:5815..5980Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13793 5816..5980 -
1622815826.6412907-CDS-M-pyrifera_M_contig13793:6544..66641622815826.6412907-CDS-M-pyrifera_M_contig13793:6544..6664Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13793 6545..6664 -
1692277591.6591706-CDS-M-pyrifera_M_contig13793:6544..66641692277591.6591706-CDS-M-pyrifera_M_contig13793:6544..6664Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13793 6545..6664 -
1622815826.6525667-CDS-M-pyrifera_M_contig13793:7512..76081622815826.6525667-CDS-M-pyrifera_M_contig13793:7512..7608Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13793 7513..7608 -
1692277591.6704578-CDS-M-pyrifera_M_contig13793:7512..76081692277591.6704578-CDS-M-pyrifera_M_contig13793:7512..7608Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13793 7513..7608 -
1622815826.6635716-CDS-M-pyrifera_M_contig13793:8434..85361622815826.6635716-CDS-M-pyrifera_M_contig13793:8434..8536Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13793 8435..8536 -
1692277591.6803765-CDS-M-pyrifera_M_contig13793:8434..85361692277591.6803765-CDS-M-pyrifera_M_contig13793:8434..8536Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13793 8435..8536 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815826.6758633-UTR-M-pyrifera_M_contig13793:8536..85421622815826.6758633-UTR-M-pyrifera_M_contig13793:8536..8542Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig13793 8537..8542 -
1692277591.690156-UTR-M-pyrifera_M_contig13793:8536..85421692277591.690156-UTR-M-pyrifera_M_contig13793:8536..8542Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig13793 8537..8542 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig13793.6075.1prot_M-pyrifera_M_contig13793.6075.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig13793 752..8536 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig13793.6075.1

>prot_M-pyrifera_M_contig13793.6075.1 ID=prot_M-pyrifera_M_contig13793.6075.1|Name=mRNA_M-pyrifera_M_contig13793.6075.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=238bp
MDFDSYGLNPRLQQQLRKVGVDKFFPVQAQCFEKVVNGQDLMCKSRTGSG
KTLAFAIPIIEALDRQSQGEAVQSQRGGRGRHFSRGARGRLPRAICVAPT
RELAKQVEREFNRIAPELSSLAVYGGTALGPQIGEMRRGVDIIVGTPGRI
IDHISQGNLNLSEIQFCVLDEADLMLQMGFQEPVEEIFKEMPDNKQTTLW
SATMPRDRLGAEPLHGGLTQAAREACLGRFRSGRTKV*
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mRNA from alignment at M-pyrifera_M_contig13793:752..8542-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig13793.6075.1 ID=mRNA_M-pyrifera_M_contig13793.6075.1|Name=mRNA_M-pyrifera_M_contig13793.6075.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=7791bp|location=Sequence derived from alignment at M-pyrifera_M_contig13793:752..8542- (Macrocystis pyrifera P11B4 male)
AAAGCCATGGACTTCGACTCGTACGGCTTGAACCCCAGGCTGCAGCAACA
ATTGCGGAAGGTCGGCGTGGACAAATTCTTTCCCGTTCAAGCGCAGTGCT
TCGAGAAGGTCAGAGAGGGACCGGAGGGTGGGGGGTGGGTCGGGGATGGC
CGCAGGGAGATCGGGGGGTCGAGGGTGGCAGGGCGGGAGGGGGGCGGTTG
GCGGGGCCGAGGGGGTGGGAGGAAGTGGGAGATTGGCGAGGTTGGGCGGG
GGGGAGGGGGCGAGGGATAGAAATGGGCGGGAAAGTGGGCGGGATAGGGG
GTTGGGGCGGTCGAGGCGTTTAGGGGGGGGCGTGGAGGGGGGAGAGTCTG
GGGGGAGGGGGGGGGGCTCCCGCCTCCACTTCTCACCCCTCTTGTAACGG
CGCGCTGCTATTGAAACCCCTTAAGGCCTAGTTGCACTCCCGTTTCTGCG
AGTAATGCACTAGGATTAGCGTTAGGGGTAGGTTTCCGTATACACAATAG
CGACCGTGGTAAAAGGGTCTCGTAGTAAATATCACGCGGCGCTGATTGTT
TCGCACATGGGACAGATCATCGACAGATCATTCCCAGTTGATGATCCAAA
TATTTCAGGGCAGAAATATCAGATAGATAGATTCTTGATCTGTATGGTCT
GTATGGTCTGTATGATCTAGCTCATGTCGCCGGGTGAGAGCCGTGTAACC
TCCGTAGTCTACGTGGGACATGTTTTTTGTTGTTGGATTATCTGTCTGCC
CTCTTAAGGCAGATCCCGCACATACAACCTCTCACAATGGCAGCTGAGGA
GCTAGATCATCTATCTGTAGACAGATCAGATAGATAGATCAGGTAGATCA
TTACCTGTCTGTGCTGCGGATTGCTTCACTCCTCGTTTTCTTTTCTCGTG
TTGTGACGCTGCTGTTTTGTGGTTCCTTGGGCAGGTGGTAAATGGGCAGG
ACCTTATGTGCAAGAGCAGGACGGGATCTGGAAAGACCTTGGCATTCGCC
ATCCCGATCATCGAGGCGCTCGACCGTCAGGTAAAGCATGAGAACTATGG
AAAATATGGAAGTAATATATAAACTGATAAACTTGGAAGTATGGGATTGT
GCGCTTATTGAAGCGCTCGACGGTCAAGTAAATTTGGGGCGCGGAAAATA
TGGAAACGTGGAAACTAGGTATTATGTGTATGTACTCTCTGTGTGAATGC
TCGAAGTATGTGAATATGTGAATCTGAAAACAGAAAAATTGGAATTGCTT
GCACTTCCTATCGATGCGAAAATTTTGGGGGAGGGGGGGATGAAAAAAGT
AAAAATGCAGGTGCCTTGCATTACCCCTGTAAAACTCTATATTGCGTGCA
TTACCCTTTCGTATCTCCTAACTGTGACTACCTATGAAACCTTTTTGCCA
AACCGAATGTAGCTTGCCTCGCCTCACCCCATACAGCCCTTCGTTGCCCC
ATCCTATATGGCCTTCCCCCACCCTGATCTACACAGCTAACCTTGCCTCG
CCAACCCGGATGTAGCCTTACCTTGCCTTACCGCGACAAAGGCTCGCCTT
CGCGTTATCCCTGTGCAGCCTCGGCCTTGCCTTGGCCCTATCTATATACC
CATGTGAGCTCGCCTTGCCAACCCGGATGTAGTCTTGCCTTTGCCTTGCC
AACCCGGATGTAGTCTTGTCTTTGCCTTGCCAACCCGGATGTAGTCTTGT
CTTTGCCTTGCCAACCCGGATGTAGACTTGCCTTTGCCTTGCCAAACCGG
ATGTAGTCTTGCCTTTGCCTTTGCCTCACCCCCTTCTGCGGTTGTAACCT
TGTCTTGCGAACCCGGAACCTCGGCCCCGTGTTTCCGTGTTGTCGCCGTT
GGCGCTTCTGTTTCCCTTGACACCACAGAGCCAGGGAGAGGCAGTGCAGA
GCCAGAGGGGAGGACGGGGGAGGCATTTCAGCAGAGGGGCCCGGGGACGT
CTGCCACGCGCCATCTGCGTCGCGCCTACGCGAGAGCTGGCCAAGCAGGT
ATTGATTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTTGCGGTTGTT
GTTTTACAGTACTTCAAGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTT
GGTGGTGGTTTTTTAGTCTTTCTTGTTTTGCTGTGTTTGTGGTTGATGCA
GTTGGTGCTGATGGTTTGTGGGGGTAGTGGTGGTGTTTTGTGGTGGCGAC
GGTGATGGTGTCGTTATTGCTGTTGCTGTTGTGGTACTGCGGCACAGTAG
CTGTTGATGCCCGTGCCACCGCTGTTGCTGTTGCTGCTGCTGCTGCTGCT
GCTGTACGAACACGGCTACGGTACCACCCTACAACTACCTCTCCTTCTCC
TCCTCCTCCTCTTCGTCCTCCTCCTTCTCCTTCTCCTCTTCTTCCTCCTC
CTCCTTGTCCTCCTCTTCCTCCTCCTCCTTGGCCTCCTCTTCTTCCTCCT
CCTACCTCTACCACCCCCCCAGCAAGTAGAACCACCACCCCTAGAACCAT
CAGCACTCCTCCTCTCTTCCCTTTCTGTTCCTCCCGTTTAACGTGGCGTT
CTTCGCGAACAGGTGGAGCGCGAGTTCAACCGCATCGCCCCGGAGCTGTC
CTCTCTTGCCGTGTACGGAGGCACTGCCCTCGGCCCCCAGATCGGGGAGA
TGCGACGAGGCGTTGACATCATCGTGGGCACACCCGGCCGCATCATCGAC
CACATCAGCCAGGGCAACCTCAACCTGGTGAGCGCTACGTACGTACGTAT
GCAGGTCCTGTGTTTTTTTTTTTCATTGTCTCTTGCTGTAGGCGACACGT
CCTGGTAGGATTTTGTTCATTTGTTTGTACCAAGCGCTACGTCCGAGTAC
GTAGGTACCAGTTACGTTTTTTTGTTCTCGTCTGTTGTGTGTGTTTTTTC
ATATTTTTTGCCCTCCGACCGACGGGAAAAACCAAGGTAAAACTTGCACA
CGTCGGAGCCGGCGTCCCCGGTGGCTGGGTAGGTGGTCCGAGTGCATACC
AGTGAGGACTTTTTCTTGCGTACAAATTGATATAGCGGAAAGCGTGAAAG
CGTGAGTTGGCTACATTCGATGAAAATCGACGAGCAGTGGGAATGCTGAA
CCCTATGCGCGATAAAAAATAAAGCACGTACCGGGGGGGGCAAGCGACGA
CACCTGTGACCACGGCTTGTCCAGAAAGAAGACCGCTGAGGGTAAAACCT
CCTACGAGTTAAGCTGGAAAGTGAAAGTGATGATCGGATAGATCAGACAG
ATGATCTGCAGATCATTCGCACAGTTCATGATGTAGATCCTCCAGGGCAG
ATAGATAGATTCCTGATGTGTACCAGGTATGATCCATAGCTCGTGCTACT
GCTGTGTGGGAGCTACGGGATTGTGCTGTATCCAGGGGAATATCAGAAAA
CGTAGCGCTCTGGCCGAGAATATAATCCCCATTCGGCAGGGCTTCGAATC
GGCTGTGTTTTTACCGATATTTGAAAAATCGATTTCGGCGCGCAGACGAT
ATACCTGGTATCCGATAAATCGGCGAATCCCGCGTGTGAGCAAACCCTTG
TTTTGAATCCTCGTTTTGCGATAAATATGGCTGAGTCCTAACTCGAGTCA
TGAAAAATCGGGACGTCGTTTTGCCGATGTTTTGCCGGAAGAAAGAAGTA
CGTCCCGATTTTCCGATTCCGATTTATATCGCTCCGAATAGTGGGGTGGA
TCGGCTCCGATTCATAGCCCGGCGCTAACTAACATATGTACTGTACTATG
ATATATGAGCATCAAGCGGAGATTATGTTCCCGGCCAGAGTGGTGGAATT
AGTCGTGTGTGGTTTTTCTTCGCGTCGATTTGGTCGACCCATTCTTTTTC
TTGGCGCTGATTGACCGACCCTTACTGTTTCTTCACGCTGATTAGTCGAC
CCTTCTTTTTCTTCTTGTTGATTGGTCGTCGTTGCAGAGCGAGATTCAGT
TCTGCGTGCTGGATGAGGCGGACCTGATGCTTCAGATGGGATTCCAGGAG
CCTGTGGAGGAAATCTTCAAGGAGATGCCGGACAACAAGCAGACCACCCT
GTGGTCGGCGACGATGCCTCGTGAGTCCTGCTCCTATCATCTCCTGTTGC
ACAATATTCCACACCTCGCACACCTCGCACAGATCATGATCTACCTGATC
TATCTATCTGATCTGTCTACAGATAGATGATCTAGCTCCTCAGCTGCCGT
TGTGAGAGGTTGTATGTGCAGGATCTTCCTTATAGGGCAGATAGATCACA
CTCAACCCAAAAAACGTGTGCTACAGTAGATCGTGCAGATTGTTCGACTC
CCGTCCGGCAACATTAGCTAGATCATAAAGATCAGGGATCTATTTATCTA
TCTATCTGCCCCGAACGAAATAGATGGTGAACTGTGGGAATGATCTCATC
TGTCGCAGGCGTTTTTTGTTTCCAGCCCTGTCAATGTGTCGTTACTGGAG
CTGTGAGTGGACGGGATCTTACGAGTTGCGGCTATTAGTAGGCGGTAGAT
GCCGCTGTTACGGGGGGGCATAGTAAATAGGACCTACGCTACACACAAAA
ACCTATATATTTCCCTATTTTCACTAACTTTATTTGGTCCTATTCACTAT
GGTCCCCCGTAATAGCGAACTGTCTGACTTCGGTCGGCAGGTGGGCTGGT
TTAACCACCTATCGGACAGCCGACTTGCCGACTTAGGGTTAGTTGTAGGC
TGGTCTGTATGATACACGGCAGTATAAGTTATGTTACCGGATGAGAGCCG
TATAGAATGCGTATGACCTCGTAGCAAATGTTTCCTGGATTGGATATGTA
CTGTTTGTACAGAACCTGCACAGCATCTCGTAACGGAAGGCTAGGATCTA
TCTGATCTATCTGTAGATGATCTAAGTGATCTATCTGCAGATGATCTAGA
TGATCTATCTGCAGATGACCTAGATCATATAGATGATCTATCCGTAGATG
ACCTATTACGGGGGACCATAGTAAATAGGACCAAACATTGTTCGTAAAAA
TATGTAAATATATAGGGTTTCGTGTGTCCCGTAGATCCCATTAACTATGG
ACCCCCGTAATAGATGATATATCTAAAGATGATCTAGATGATCTATCCGA
AAATGATCTATCTGATCTATCCGAAGATGATCTATCTGATCTATCCGTAG
ATGATGTAGATGATCTATCTGTAGATGATATATATGTAGATGATCTAGAT
GATCTACCTGCAGATGATGTAGGTGATCTATCTGTAGATGATCTAGGTGA
TCTATCCGTAGATGACGTAGATGATCTATCTGAAGATGATCTACCTGATC
TGTCTGTAGATCATCTATATGATGTAGATGATCTATCTGTAAATGATCTT
GATGATCTATCTGTGGATGACCTATAAGATCTGTCTGTGGATAACCTATT
TTTTCGACGTGTGAATGGTTGGGTGCGGCAGCTGTATCGCACAAGTGAAG
TCGCCGACTTTCATACACTCGTATTATGAACCCTGATGCGTTTTTTTTTC
TGTCACATTGTTCAGAAGGGTGATTTAACCCCTTTCACGGCTGCAAAAAC
CAATTCTGCACAAATTCCGAGCTGTTGCTCCAAAAAAAAAAAAGGGTTTA
CAGTTTGCAGTAGTCGAAGCGGTCTGCTTTGATTTGTTCTATGTTTTTTT
TTTTTTCCTCACGAAAAAAAAGGTTGGGTGCAGCAGCTGTCGCACAAACA
GGCACCTCGAGTGTCAGACTTTTATGTTATTACAAGTATAATTTGGCACA
ATTTGGTTCTCAAGTCGCGGAAGAGTTAGGAAGCGGTCTGTTTTATGTCA
TTTATACGGTTGTCTTACAAAATGGTTGGGTGCAGCGGCTGTCGCACAAG
TACCTCTCAAGTCTCCGTCGTTCATTGACCTGGTGTGTTCATTTTCGTCG
TATTTTCCGTTTGAAAGTCCTAAAAAGGCTAAGAAACGCTTTTTTTTTCA
CCCGTTTGTTTTTGCAATGGACCAGGTTGGGTACAGCAGCTGTCTCGGAG
ATACCTTAAGTCTCCGTCGTTTATCGACATGGTCGGGGAGGATGATGTTA
AAATCCCCTCGACCATCGAGCACTGGAGCTACGCCACACAGAGGGAAACG
CGTGCGGACATCTTGGGCCTGGTGGCGGCGATTCACGGTTCCAGAAAGCG
CTCCATCGTCTTCACGCAGGTATTTTTATTTTTGTTTTCTCTGTTTTGTG
ATCCAATTAAGTATATACCGGGTGAGCGTATATTTACATTTATGTTTTTT
TCTTTCCTCCTTCTTGCTTTCTGTTATATTTCCTGCTTCTGATTGCCAAA
AATTACTGGTGCATATTTTCTGTTATTTTCCCTTTTTTCTATTTTTTTTT
GTTTTTGTTTTGTGTTCGCGTCTGTACATGTAGACTTACATACTTGGTAG
CAGACTGCTGTAGTCTACAATAATAGCGTTTTTCGTCTTTTTTTTTTACT
GTTTTTTTTTCGATTCCATCTCTCTCCGTTTTTCTCGTCTCCTGGTTTTC
GTTCGTTTCTGTTAGGTCTTGTTTGTAAAATTCTGTTTTTCTCTTGGACC
TATCTTAGCTGTTAATAGTGACGGTTTCCCACAAGCACTGCATCGTTTTG
CACCCTCACTGAGACATTTCGTACGCCAGTTCGACTTGCTTGTTTCCGAC
AATGGTTGCACATTTAGGACCCGGAAGGAAAGCCGGGTAGGGGGGACTCA
TTCCAAGACGCACACGGCTGATTTTTTCTCGGTCCGCGGGTCGAAAACAT
CAACGTTTGTCGGAAACAGACCAATCGACTTTAAACAACATCGAACTGGA
GTGAAAGAAACAACCTCAGTTTTTTTTTTTCTTCTTGTTAGTTTTTACTT
GTCTGTTTTATGTCGCCCCTGTCACCTGCTTCTCACAAAACGCCTCCTCG
TTTCCCCCGTGACTTGCCAAGACAGACTTGCTGTTAGTAAAGGCGTGAAA
GCGCTGTCTCCTGACATCCTTCGATATTGCTGCATGTTATTCCTGCGAGT
ACGGCACGCTGTAGATGGCTGAAACTTGCGTAGTCGTCGTCCCCGTCAAC
CACTTGGCAAAAAAAAAAAATCCTTCCTGCTAGTACAGTAGGTTGATTTA
TGCACACAAGGAGGGGGGCTGCGATTGAAGAGAGGGGTGTGTCAGGTTAC
TTAATTGAACGGTGTGTGTTCTTCACGTTAAACCGTTCTTTCTACCCGTC
GACATCCAGCACAACCAGTGTCCGTGCCGATTCTTCAATCCTAGAGAGAT
ACAAGTTCTGTGGTCACAAAGCTATGCCACAGCAGAGATACTACGTTGCC
ACGTATGCAGTAAGCACGGTAGACGATGCAATGCCATGTCATAATACTGG
ATGCGACAGGCAAGACGTACACATTCTATGAAATCGAGAAACGAAAGTCT
TGAACCGGTGTTTCTCGTAAAGGCGTTTTTTTCTCTCCTGAAACAGGCGT
TTCTTTTCAAAACCGGTTTCTGTCTTGAAAACCGGTGTTTCTCTTGAACC
GGAATGTGTGTTACTTACAGTACAGTTTATAGCTTTTTTTTGGTCCGTGC
CCAACCCTTTTAATTTAACCCCTGTTTCAGTCGGGGTTTTCGGGGGCCCC
TCAAATTGTGGCCCCCCCCCCCCCCCCCCTCCCCATACGTTACTGCTGTA
CAGACTAAGGCCGAGGTGGATGAGTTGTGCACCCATCCTGCCCTGAGTCG
ACTTGGTGCGGAGCCTTTACATGGCGGCTTGACTCAGGCGGCACGCGAGG
CGTGCCTGGGCCGCTTCCGCAGCGGTCGCACGAAGGTATGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig13793:752..8542-

>mRNA_M-pyrifera_M_contig13793.6075.1 ID=mRNA_M-pyrifera_M_contig13793.6075.1|Name=mRNA_M-pyrifera_M_contig13793.6075.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1428bp|location=Sequence derived from alignment at M-pyrifera_M_contig13793:752..8542- (Macrocystis pyrifera P11B4 male)
ATGGACTTCGACTCGTACGGCTTGAACCCCAGGCTGCAGCAACAATTGCG
GAAGGTCGGCGTGGACAAATTCTTTCCCGTTCAAGCGCAGTGCTTCGAGA
AGATGGACTTCGACTCGTACGGCTTGAACCCCAGGCTGCAGCAACAATTG
CGGAAGGTCGGCGTGGACAAATTCTTTCCCGTTCAAGCGCAGTGCTTCGA
GAAGGTGGTAAATGGGCAGGACCTTATGTGCAAGAGCAGGACGGGATCTG
GAAAGACCTTGGCATTCGCCATCCCGATCATCGAGGCGCTCGACCGTCAG
GTGGTAAATGGGCAGGACCTTATGTGCAAGAGCAGGACGGGATCTGGAAA
GACCTTGGCATTCGCCATCCCGATCATCGAGGCGCTCGACCGTCAGAGCC
AGGGAGAGGCAGTGCAGAGCCAGAGGGGAGGACGGGGGAGGCATTTCAGC
AGAGGGGCCCGGGGACGTCTGCCACGCGCCATCTGCGTCGCGCCTACGCG
AGAGCTGGCCAAGCAGAGCCAGGGAGAGGCAGTGCAGAGCCAGAGGGGAG
GACGGGGGAGGCATTTCAGCAGAGGGGCCCGGGGACGTCTGCCACGCGCC
ATCTGCGTCGCGCCTACGCGAGAGCTGGCCAAGCAGGTGGAGCGCGAGTT
CAACCGCATCGCCCCGGAGCTGTCCTCTCTTGCCGTGTACGGAGGCACTG
CCCTCGGCCCCCAGATCGGGGAGATGCGACGAGGCGTTGACATCATCGTG
GGCACACCCGGCCGCATCATCGACCACATCAGCCAGGGCAACCTCAACCT
GGTGGAGCGCGAGTTCAACCGCATCGCCCCGGAGCTGTCCTCTCTTGCCG
TGTACGGAGGCACTGCCCTCGGCCCCCAGATCGGGGAGATGCGACGAGGC
GTTGACATCATCGTGGGCACACCCGGCCGCATCATCGACCACATCAGCCA
GGGCAACCTCAACCTGAGCGAGATTCAGTTCTGCGTGCTGGATGAGGCGG
ACCTGATGCTTCAGATGGGATTCCAGGAGCCTGTGGAGGAAATCTTCAAG
GAGATGCCGGACAACAAGCAGACCACCCTGTGGTCGGCGACGATGCCTCG
TGAAGCGAGATTCAGTTCTGCGTGCTGGATGAGGCGGACCTGATGCTTCA
GATGGGATTCCAGGAGCCTGTGGAGGAAATCTTCAAGGAGATGCCGGACA
ACAAGCAGACCACCCTGTGGTCGGCGACGATGCCTCGTGATCGACTTGGT
GCGGAGCCTTTACATGGCGGCTTGACTCAGGCGGCACGCGAGGCGTGCCT
GGGCCGCTTCCGCAGCGGTCGCACGAAGGTATGATCGACTTGGTGCGGAG
CCTTTACATGGCGGCTTGACTCAGGCGGCACGCGAGGCGTGCCTGGGCCG
CTTCCGCAGCGGTCGCACGAAGGTATGA
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