mRNA_M-pyrifera_M_contig13746.6056.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig13746.6056.1 vs. uniprot
Match: D8LJQ1_ECTSI (Polyprenol reductase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJQ1_ECTSI) HSP 1 Score: 131 bits (330), Expect = 1.470e-35 Identity = 58/83 (69.88%), Postives = 67/83 (80.72%), Query Frame = 1
Query: 16 YAMPTQGWFQYVSCPHYFAELLIYISFMLMAGWDGGGPSQGYVVALLWVFANQALVAGHSHAWYKSKFEDYPPSRKRLIPGVW 264
YA+PT GWF+YVSCPHYFAELL+Y SF+L+ + G G QGY+VA WVFANQALVAG AWY+ KFEDYP R+RLIPGVW
Sbjct: 236 YAIPTAGWFRYVSCPHYFAELLVYGSFVLLGSFKGRGLGQGYLVAFAWVFANQALVAGWVQAWYQQKFEDYPRDRRRLIPGVW 318
BLAST of mRNA_M-pyrifera_M_contig13746.6056.1 vs. uniprot
Match: A0A087UJP6_STEMI (Polyprenol reductase (Fragment) n=1 Tax=Stegodyphus mimosarum TaxID=407821 RepID=A0A087UJP6_STEMI) HSP 1 Score: 89.7 bits (221), Expect = 8.160e-21 Identity = 45/87 (51.72%), Postives = 58/87 (66.67%), Query Frame = 1
Query: 1 VSTSTYAMPTQGWFQYVSCPHYFAELLIYISFMLMAGWDGGGPSQGYVVALLWVFANQALVAGHSHAWYKSKFEDYPPSRKRLIPGV 261
VST+ Y MP G+F+YVSCPHYFAE+L+Y+S L+ G G S + + LWV NQ L SH WY+ KFE+YPP RK +IP +
Sbjct: 78 VSTAHY-MPCGGFFEYVSCPHYFAEILMYLSGCLILG----GKSYTWWLLCLWVVTNQILTGLMSHQWYQQKFENYPPKRKAVIPFI 159
BLAST of mRNA_M-pyrifera_M_contig13746.6056.1 vs. uniprot
Match: R7UW84_CAPTE (Polyprenol reductase n=1 Tax=Capitella teleta TaxID=283909 RepID=R7UW84_CAPTE) HSP 1 Score: 87.4 bits (215), Expect = 9.490e-19 Identity = 41/88 (46.59%), Postives = 59/88 (67.05%), Query Frame = 1
Query: 1 VSTSTYAMPTQGWFQYVSCPHYFAELLIYISFMLMAGWDGGGPSQGYVVALLWVFANQALVAGHSHAWYKSKFEDYPPSRKRLIPGVW 264
V T T+ +P GWF+YVSCPHYF E+LIY +F ++AG+ + +++V+ANQA+ A SH WYK F+DYP R+ LIP ++
Sbjct: 219 VRTLTHHIPRGGWFEYVSCPHYFMEVLIYTAFGMVAGFS----NLTVWSVVIFVYANQAIAARVSHNWYKDTFKDYPKQRRALIPFIF 302
BLAST of mRNA_M-pyrifera_M_contig13746.6056.1 vs. uniprot
Match: A0A835Z372_9STRA (Polyprenol reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z372_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 1.210e-18 Identity = 39/86 (45.35%), Postives = 55/86 (63.95%), Query Frame = 1
Query: 7 TSTYAMPTQGWFQYVSCPHYFAELLIYISFMLMAGWDGGGPSQGYVVALLWVFANQALVAGHSHAWYKSKFEDYPPSRKRLIPGVW 264
T++Y +PT G F VSCPHYF E+ +Y SF+++ G G V+ L+WV N ++ A H HAWY S +DYP R+RL+P +W
Sbjct: 214 TASYRIPTAGLFSEVSCPHYFWEIALYASFVMITG----GQVCSVVLMLVWVITNLSINAAHMHAWYWSHLKDYPVRRRRLVPFLW 295
BLAST of mRNA_M-pyrifera_M_contig13746.6056.1 vs. uniprot
Match: UPI0015A8AC61 (polyprenol reductase-like n=1 Tax=Stegodyphus dumicola TaxID=202533 RepID=UPI0015A8AC61) HSP 1 Score: 85.5 bits (210), Expect = 5.210e-18 Identity = 43/87 (49.43%), Postives = 57/87 (65.52%), Query Frame = 1
Query: 1 VSTSTYAMPTQGWFQYVSCPHYFAELLIYISFMLMAGWDGGGPSQGYVVALLWVFANQALVAGHSHAWYKSKFEDYPPSRKRLIPGV 261
VST+ Y MP G+F+YVSCPHYFAE+++Y+S L+ G G S + + LWV NQ L SH WY+ KFE+YP RK +IP +
Sbjct: 223 VSTAHY-MPCGGFFEYVSCPHYFAEIVMYLSGCLILG----GKSYTWWLLCLWVVTNQVLTGLMSHQWYRQKFENYPLKRKAVIPFI 304
BLAST of mRNA_M-pyrifera_M_contig13746.6056.1 vs. uniprot
Match: UPI001C40D8E7 (polyprenol reductase n=1 Tax=Solea senegalensis TaxID=28829 RepID=UPI001C40D8E7) HSP 1 Score: 85.5 bits (210), Expect = 5.600e-18 Identity = 46/88 (52.27%), Postives = 56/88 (63.64%), Query Frame = 1
Query: 1 VSTSTYAMPTQGWFQYVSCPHYFAELLIYISFMLMAGWDGGGPSQGYVVALLWVFANQALVAGHSHAWYKSKFEDYPPSRKRLIPGVW 264
V T Y+MP GWF+ VSCPHYFAELLIYIS L+ G G S + + +L+V NQAL A H +Y SK+E YP RK IP V+
Sbjct: 228 VETLAYSMPKGGWFELVSCPHYFAELLIYISLSLVLG----GLSLTWWLVVLYVLFNQALAAQLCHDFYVSKYELYPKHRKAFIPFVF 311
BLAST of mRNA_M-pyrifera_M_contig13746.6056.1 vs. uniprot
Match: A0A6P3VPX1_CLUHA (Polyprenol reductase n=2 Tax=Clupea harengus TaxID=7950 RepID=A0A6P3VPX1_CLUHA) HSP 1 Score: 85.5 bits (210), Expect = 5.730e-18 Identity = 45/87 (51.72%), Postives = 54/87 (62.07%), Query Frame = 1
Query: 1 VSTSTYAMPTQGWFQYVSCPHYFAELLIYISFMLMAGWDGGGPSQGYVVALLWVFANQALVAGHSHAWYKSKFEDYPPSRKRLIPGV 261
V T + MP WF VSCPHYFAELLIY+S L G G S + + +L+V NQAL A H +Y+SKFE+YPP RK IP V
Sbjct: 230 VETLAHHMPHGCWFDLVSCPHYFAELLIYVSMALCLG----GASVTWWLVVLYVLFNQALAAQLCHEFYQSKFEEYPPQRKAFIPFV 312
BLAST of mRNA_M-pyrifera_M_contig13746.6056.1 vs. uniprot
Match: A0A1A8BLN3_9TELE (Polyprenol reductase (Fragment) n=13 Tax=Nothobranchius TaxID=28779 RepID=A0A1A8BLN3_9TELE) HSP 1 Score: 85.5 bits (210), Expect = 7.310e-18 Identity = 46/88 (52.27%), Postives = 55/88 (62.50%), Query Frame = 1
Query: 1 VSTSTYAMPTQGWFQYVSCPHYFAELLIYISFMLMAGWDGGGPSQGYVVALLWVFANQALVAGHSHAWYKSKFEDYPPSRKRLIPGVW 264
V T + MPT GWF+ VSCPHYFAELLIYISF L+ G G S + + +L+V NQAL H Y SKF YP RK +IP V+
Sbjct: 253 VETLAHRMPTGGWFELVSCPHYFAELLIYISFSLVFG----GLSLTWWLVVLYVLFNQALAGQLCHELYVSKFHSYPKHRKVIIPFVF 336
BLAST of mRNA_M-pyrifera_M_contig13746.6056.1 vs. uniprot
Match: UPI0006B0B8A2 (polyprenol reductase-like n=1 Tax=Limulus polyphemus TaxID=6850 RepID=UPI0006B0B8A2) HSP 1 Score: 85.1 bits (209), Expect = 7.360e-18 Identity = 38/87 (43.68%), Postives = 56/87 (64.37%), Query Frame = 1
Query: 1 VSTSTYAMPTQGWFQYVSCPHYFAELLIYISFMLMAGWDGGGPSQGYVVALLWVFANQALVAGHSHAWYKSKFEDYPPSRKRLIPGV 261
V T + +P+ GWF +VSCPHYFAE++IY++ L+ G G + + LWV NQ L A SH WYKS F++YP +R+ ++P +
Sbjct: 223 VVTYHHQLPSGGWFDWVSCPHYFAEIVIYMAMNLILG----GHHGNWWLVCLWVICNQVLAAIMSHHWYKSNFKEYPKTRRAIVPFI 305
BLAST of mRNA_M-pyrifera_M_contig13746.6056.1 vs. uniprot
Match: A0A061SJL0_9CHLO (Polyprenol reductase n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SJL0_9CHLO) HSP 1 Score: 82.4 bits (202), Expect = 1.090e-17 Identity = 36/82 (43.90%), Postives = 49/82 (59.76%), Query Frame = 1
Query: 16 YAMPTQGWFQYVSCPHYFAELLIYISFMLMAGWDGGGPSQGYVVALLWVFANQALVAGHSHAWYKSKFEDYPPSRKRLIPGV 261
Y +P GWF+ VSCPHY AE+++YI +L G S G + LLWV N + A +H WY+ F DYP R+ +IPG+
Sbjct: 110 YGLPRGGWFELVSCPHYLAEIVLYIGIVLFQG-----VSAGAFLMLLWVVVNLSFTAMATHTWYRKNFIDYPRERRAIIPGI 186 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig13746.6056.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig13746.6056.1 >prot_M-pyrifera_M_contig13746.6056.1 ID=prot_M-pyrifera_M_contig13746.6056.1|Name=mRNA_M-pyrifera_M_contig13746.6056.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=82bp MPTQGWFQYVSCPHYFAELLIYISFMLMAGWDGGGPSQGYVVALLWVFANback to top mRNA from alignment at M-pyrifera_M_contig13746:4691..4957+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig13746.6056.1 ID=mRNA_M-pyrifera_M_contig13746.6056.1|Name=mRNA_M-pyrifera_M_contig13746.6056.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=267bp|location=Sequence derived from alignment at M-pyrifera_M_contig13746:4691..4957+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig13746:4691..4957+ >mRNA_M-pyrifera_M_contig13746.6056.1 ID=mRNA_M-pyrifera_M_contig13746.6056.1|Name=mRNA_M-pyrifera_M_contig13746.6056.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=492bp|location=Sequence derived from alignment at M-pyrifera_M_contig13746:4691..4957+ (Macrocystis pyrifera P11B4 male)back to top |