mRNA_M-pyrifera_M_contig1371.6037.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig1371.6037.1 vs. uniprot
Match: A0A6H5JCD8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCD8_9PHAE) HSP 1 Score: 185 bits (469), Expect = 1.140e-48 Identity = 98/243 (40.33%), Postives = 142/243 (58.44%), Query Frame = 1
Query: 124 RVSGREEWVADSGATFHVTGNPFGIVDCTPPLPDKSRLVVGDMRSLKIEYFGQIAMVMHSSQCSVQVRLLDVAYIPGVRFNLFSLHAVMLKCPVTLDAQGVHTLNEQLSFIRTGAGSYVDATRIVEDP----IAAAVLAPGKMRKIDINGLHVSLAHSHADTLRETAHQVGIKVFGELVPCARCSEAKGRRMAVPWTTECRSTRPLECLFVDLSGQQPTSASGAQYLMMIVDDYSRLGWPYFL 840
R G W+ DS +T H T + + + PPL +++ L +GD R LK E FG + +V H + V V + D+A +P + F+L SL+ + + L++ G LN ++ F + G+Y+ ATRI + AA + PG+ R I+IN LHVSL H++ RETA Q+GI+V G CA C EAK R +VP T+ ++ RP LF+DL+G P S GA+Y MM+VDDYS +GW FL
Sbjct: 9 RRPGSTVWIGDSASTVHATSDGTHVYNTRPPLAEETFLFIGDGRKLKAECFGSLDVVFHCRE-DVLVTMKDIAVVPDLAFDLVSLNVIQETHDLLLNSAGTWILNGRVHFSKLPTGNYIQATRIAHGASPPAMVAATVRPGRPRSININDLHVSLGHTNDANARETAKQLGIQVTGTRGYCAGCGEAKAIRRSVPKETKAKAGRPFGRLFIDLTGPYPPSTGGARYCMMVVDDYSNVGWTLFL 250
BLAST of mRNA_M-pyrifera_M_contig1371.6037.1 vs. uniprot
Match: A0A6H5L6D3_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6D3_9PHAE) HSP 1 Score: 127 bits (320), Expect = 3.830e-29 Identity = 72/164 (43.90%), Postives = 94/164 (57.32%), Query Frame = 1
Query: 508 IAAAVLAPGKMRKIDINGLHVSLAHSHADTLRETAHQVGIKVFGELVPCARCSEAKGRRMAVPWTTECRSTRPLECLFVDLSGQQPTSASGAQYLMMIVDDYSRLGWPYFL--KRNSDVPKVLAGFLADINA-KGVPSIVECLRSDNGTEFTKAEFVDLLNHHG 990
+ AA + PG+ R I+IN LHVSL H++ RETA Q+GI+V G CA C EAK R +VP T+ ++ RP +F+DL+G P S GA+Y MM+VDDYS +GW FL K S + + D G + R DNGTEFT EF LL+ G
Sbjct: 1 MVAATVRPGRPRSININDLHVSLGHTNDANARETAKQLGIQVTGTRGYCAGCGEAKAIRRSVPKETKAKAGRPFGRVFIDLTGPYPPSTGGARYCMMVVDDYSNVGWTLFLADKGGSTLCDAFRAWYVDTKQLAGTHGGLGVARFDNGTEFTNTEFRHLLSELG 164
BLAST of mRNA_M-pyrifera_M_contig1371.6037.1 vs. uniprot
Match: A0A6H5JEM9_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEM9_9PHAE) HSP 1 Score: 126 bits (317), Expect = 1.290e-28 Identity = 71/164 (43.29%), Postives = 94/164 (57.32%), Query Frame = 1
Query: 508 IAAAVLAPGKMRKIDINGLHVSLAHSHADTLRETAHQVGIKVFGELVPCARCSEAKGRRMAVPWTTECRSTRPLECLFVDLSGQQPTSASGAQYLMMIVDDYSRLGWPYFL--KRNSDVPKVLAGFLADINAKGVP-SIVECLRSDNGTEFTKAEFVDLLNHHG 990
+ AA + PG+ R IDIN LHVSL H++ RETA Q+GI++ G CA C EAK R +VP + ++ RP +F+DL+G P S GA+Y MM+VDDYS +GW FL K S + + D + + R DNGTEFT AEF LL+ G
Sbjct: 1 MVAATVRPGRPRSIDINDLHVSLGHTNDANARETAKQLGIQITGTRGYCAGCGEAKAIRRSVPKEPQTKAGRPFGRVFIDLTGPYPPSTGGARYCMMVVDDYSNVGWTLFLADKSGSTLSGAFRAWYVDNKQLAMAHGGLGVARFDNGTEFTNAEFRHLLSELG 164
BLAST of mRNA_M-pyrifera_M_contig1371.6037.1 vs. uniprot
Match: A0A6H5K3H9_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3H9_9PHAE) HSP 1 Score: 123 bits (309), Expect = 9.780e-28 Identity = 70/161 (43.48%), Postives = 90/161 (55.90%), Query Frame = 1
Query: 517 AVLAPGKMRKIDINGLHVSLAHSHADTLRETAHQVGIKVFGELVPCARCSEAKGRRMAVPWTTECRSTRPLECLFVDLSGQQPTSASGAQYLMMIVDDYSRLGWPYFL--KRNSDVPKVLAGFLADINA-KGVPSIVECLRSDNGTEFTKAEFVDLLNHHG 990
A + PG+ R I+IN LHVSL H++ RETA Q+GI+V G CA C AK R +VP T+ ++ RP F+DL+G P S GA+Y MM+VDDYS +GW FL K S + + D G + R DNGTEFT EF LL+ G
Sbjct: 195 ATVRPGRPRSININDLHVSLGHTNDANARETAKQLGIQVTGTRGYCAGCGVAKAIRRSVPMETKAKAERPFGRAFIDLTGPYPPSTGGARYCMMVVDDYSNVGWTLFLADKGGSTLCDAFRAWYVDTKQLAGTHGGLGVARFDNGTEFTNTEFRHLLSELG 355
BLAST of mRNA_M-pyrifera_M_contig1371.6037.1 vs. uniprot
Match: A0A6H5JU31_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU31_9PHAE) HSP 1 Score: 111 bits (277), Expect = 2.940e-23 Identity = 67/168 (39.88%), Postives = 89/168 (52.98%), Query Frame = 1
Query: 511 AAAVLAPG--------KMRKIDINGLHVSLAHSHADTLRETAHQVGIKVFGELVPCARCSEAKGRRMAVPWTTECRSTRPLECLFVDLSGQQPTSASGAQYLMMIVDDYSRLGWPYFLKRNSDVPKVLAGFLADINAKGVPSIVECLRSDNGTEFTKAEFVDLLNHHG 990
A A++APG IDIN H S H + +RETA Q G+++ GEL PCA C EAKGRR VP R+ P + +DL+G + G++Y +M VD SR Y ++ SD K + FLAD+N G P C R DNG EFT A F++ + G
Sbjct: 330 ALAIIAPGASPFSVGKSTPTIDINLFHASTGHVNEFLMRETAKQQGVRLVGELQPCAGCVEAKGRRALVP-RRGTRAAVPFGKVHIDLTGPFTEAMDGSRYPIMFVDSASRWQRGYGMRAKSDTLKYVKRFLADMNGMGTPG---CFRMDNGGEFTGAAFIEFCDAAG 493
BLAST of mRNA_M-pyrifera_M_contig1371.6037.1 vs. uniprot
Match: A0A6H5L7P2_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7P2_9PHAE) HSP 1 Score: 103 bits (257), Expect = 2.190e-21 Identity = 64/162 (39.51%), Postives = 86/162 (53.09%), Query Frame = 1
Query: 508 IAAAVLAPGKMRK-IDINGLHVSLAHSHADTLRETAHQVGIKVFGELVPCARCSEAKGRRMAVPWTTECRSTRPLECLFVDLSGQQPTSASGAQYLMMIVDDYSRLGWPYFLKRNSDVPKVLAGFLADINAKGVPSIVECLRSDNGTEFTKAEFVDLLNHHG 990
+ A+ A G K +DI+ H SLAH+ LRET Q GI + G+LVPC C AKGRR +VP R+++P + VDL G G YL + VD SR Y L+R SD LAD+ + I EC+R DNGTE+T+ +F + +G
Sbjct: 61 LGASPFALGSTEKSVDIDRFHRSLAHACEPLLRETDQQRGIMLTGKLVPCTDCMRAKGRRGSVPRRPGARASKPFGRVHVDLCGPLVPFLGGNLYLFVAVDSASRWNKVYGLRRKSDALAATKRLLADVGRYDLGRI-ECVRVDNGTEWTRGDFRRFCDDNG 221
BLAST of mRNA_M-pyrifera_M_contig1371.6037.1 vs. uniprot
Match: A0A1Z5KHE7_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KHE7_FISSO) HSP 1 Score: 100 bits (249), Expect = 1.290e-19 Identity = 77/287 (26.83%), Postives = 137/287 (47.74%), Query Frame = 1
Query: 94 HQGEATDDLFRVSGREEWVADSGATFHVTGNPFGIVDCTPPLPDKSRLVVGDMRSLKIEYFGQIAMVMHSSQCSVQVRLLDVAYIPGVRFNLFSLHAVMLK-CPVTLDAQGVHTLNEQLSFIRTGAGSYVDATRIVEDPIAAAVLAPGKMRKIDINGLHVSLAHSHADTLRETAHQVGIKVFGELVPCARCSEAKGRRMAVPWTTECRSTRPLECLFVDLSGQQPTSASGAQYLMMIVDDYSRLGWPYFLKRNSDVPKVLAGFLADINAKGVPSI-VECLRSDNGTE 948
HQ A D + +V +E+++ DSGAT HV + + D + K LVVGD + +++ G + + ++L +V P N+ S A++ + C + + + + + + T S+ + + + V A K+DIN H H+ L+ Q+GI++ G C C+ AK + AV +T ++T E +VD SG S + Y +++VDD++R W +F+ + S + KV+ FL + KG P++ V+ +R DN E
Sbjct: 315 HQVGAVD-VMKVEDKEKFLLDSGATCHVVVDETILRDV---VSTKEYLVVGDGKEVQVHKKGTLMLATAGGT----MKLSEVKVAPTFAKNIISTGALVKQGCKIEITSCAMKITDPSGKSVLTVPQSHYGLYYLKASVVKSNVHAVETKVKMDINAAHDMYGHASDIPLKSLMKQLGIELTGTKTTCEACAYAKAKAKAVCKSTAIKATAKGERFYVDTSGPYKKSLGQSCYWILLVDDFTRKAWSFFVTKKSMIGKVMTLFLDRL--KGDPNVNVKYIRCDNAGE 591
BLAST of mRNA_M-pyrifera_M_contig1371.6037.1 vs. uniprot
Match: A0A1Z5KT31_FISSO (Uncharacterized protein (Fragment) n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KT31_FISSO) HSP 1 Score: 99.8 bits (247), Expect = 2.520e-19 Identity = 84/285 (29.47%), Postives = 134/285 (47.02%), Query Frame = 1
Query: 139 EEWVADSGATFHVTGNPFGIVD---CTPPLPDKSRLVVGDMRSLKIEYFGQIAMVMHSSQCSVQVRLLDVAYIPGVRFNLFSLHAV--------MLKCPVTL-DAQGVHTLNEQLSFIRTGAGSYVDATRIVEDPIAAAVLAPGKMRKIDINGLHVSLAHSHADTLRETAHQVGIKVFGELVPCARCSEAKGRRMAVPWTTECRSTRPLECLFVDLSGQQPTSASGAQYLMMIVDDYSRLGWPYFLKRNSDVPKVLAGFLADINAKGVPSIVECLRSDNGTEFTK 957
E ++ DSGAT HV +VD T K L+VG+ + + G + + S V+L +V P N+ S ++ M +T+ DA G H++ + G Y++AT ++E V A K+DIN H H+ + L+E + Q+GI + GE C C+ AK + AV +T ++T+ E LFVD SG S + Y +++VDD++R W YF+ + + V+ FL ++ GV V+ +R DN E K
Sbjct: 320 ERFLLDSGATCHV------VVDETILTNVQDKKDVLIVGNGKEVTTFKTGTLTLSTESGL----VKLQNVRVAPTFAKNIISTGSLEKQGNKIEMSNGVMTITDASGKHSVKIPR---KNGTLYYLEATPVIE-----GVDAVESTSKLDINEAHEKYGHASNNPLKEVSKQLGIVLTGEKKTCEACAYAKAKAKAVCKSTLVKATKKGERLFVDTSGPYKMSLAKNSYWILVVDDFTRKAWSYFVDKKLKIKDVMEKFLDKLSGCGVE--VKFVRCDNAGENDK 584
BLAST of mRNA_M-pyrifera_M_contig1371.6037.1 vs. uniprot
Match: A0A6H5L6V8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6V8_9PHAE) HSP 1 Score: 99.4 bits (246), Expect = 3.240e-19 Identity = 59/150 (39.33%), Postives = 80/150 (53.33%), Query Frame = 1
Query: 541 RKIDINGLHVSLAHSHADTLRETAHQVGIKVFGELVPCARCSEAKGRRMAVPWTTECRSTRPLECLFVDLSGQQPTSASGAQYLMMIVDDYSRLGWPYFLKRNSDVPKVLAGFLADINAKGVPSIVECLRSDNGTEFTKAEFVDLLNHHG 990
+ +DI+ H SLAH+ LRET Q GI + G+LVPC C AKGRR +VP R+++P + VDL G S G YL + V R Y L+R SD LAD+ + I EC+R DNGTE+T+ +F + +G
Sbjct: 360 KSVDIDRFHRSLAHACEPLLRETDQQRGIMLTGKLVPCTDCMRAKGRRGSVPRGPGARASKPFGRVHVDLCGPLVPSLGGNLYLFVAVASALRWNKVYGLRRKSDALAATKRLLADVGRYDLGRI-ECVRVDNGTEWTRGDFRRFCDDNG 508
BLAST of mRNA_M-pyrifera_M_contig1371.6037.1 vs. uniprot
Match: A0A540KZT6_MALBA (Uncharacterized protein n=1 Tax=Malus baccata TaxID=106549 RepID=A0A540KZT6_MALBA) HSP 1 Score: 96.7 bits (239), Expect = 1.670e-18 Identity = 81/313 (25.88%), Postives = 146/313 (46.65%), Query Frame = 1
Query: 106 ATDDLFRVSGREEWVADSGATFHVTGNPFGIVDCTPPLPDKSRLVVGDMRSLKIEYFGQIAMVMHSSQCSVQVRLLDVAYIPGVRFNLFSLHAVM---------------LKCPVTLDAQGVHTLNE-QLSFIRTGAGSYVDATRIVEDPIAAAVLAPGKMRKIDINGLHVSLAHSHADTLRETAHQVGIKVFGELVPCARCSEAKGRRMAVPWTTECRSTRPLECLFVDLSGQQPT-SASGAQYLMMIVDDYSRLGWPYFLKRNSDVPKVLAGFLADINAKGVPSI-VECLRSDNGTEFTKAEFVDLLNHHG 990
+T + ++ ++EW+ DSG H+TG+ V P +++ +V D ++E G + + + + + L +V ++PG++ NLFS+ +V+ L+ + A VHT + +F+ + + SY+D E+ A L ++ +++ L V + + L I F V C C K R+ ++ RS PLEC+ D+ G T S SG +Y++++VDD+SR W YF+K+ S+V F + +GV + ++CL ++NG EF F G
Sbjct: 100 STINAMVINFKDEWIVDSGCGHHLTGDGSKFVHLQPHKGNEA-MVTADNTVHQVEKEGTVII---NDGGNDSITLKNVFHVPGMKKNLFSVPSVVDAGNFVLFGPKDVKFLRNVEIVKADVVHTGRRVKDTFVLSASSSYIDKVSCNEN----ASLWHARLGHVNMEKLKVMIQKNLVIGLPN------ISSFPSKVICEGCQFGKAHRLPFA-KSDSRSKAPLECIHGDVMGPTRTHSFSGFRYMLILVDDFSRFTWVYFIKQKSEVLSKFQEFKETV--EGVLGLKIKCLHTNNGGEFASDSFFKFCQQFG 395 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1371.6037.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig1371.6037.1 >prot_M-pyrifera_M_contig1371.6037.1 ID=prot_M-pyrifera_M_contig1371.6037.1|Name=mRNA_M-pyrifera_M_contig1371.6037.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=330bp PSSSTSSSPGPANNGNPTPTFDPRLLTAQFAHQGEATDDLFRVSGREEWVback to top mRNA from alignment at M-pyrifera_M_contig1371:9858..10847+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig1371.6037.1 ID=mRNA_M-pyrifera_M_contig1371.6037.1|Name=mRNA_M-pyrifera_M_contig1371.6037.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=990bp|location=Sequence derived from alignment at M-pyrifera_M_contig1371:9858..10847+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig1371:9858..10847+ >mRNA_M-pyrifera_M_contig1371.6037.1 ID=mRNA_M-pyrifera_M_contig1371.6037.1|Name=mRNA_M-pyrifera_M_contig1371.6037.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1980bp|location=Sequence derived from alignment at M-pyrifera_M_contig1371:9858..10847+ (Macrocystis pyrifera P11B4 male)back to top |