mRNA_M-pyrifera_M_contig13579.6005.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig13579.6005.1 vs. uniprot
Match: A0A6H5KNU9_9PHAE (CRIM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNU9_9PHAE) HSP 1 Score: 602 bits (1552), Expect = 2.220e-213 Identity = 317/385 (82.34%), Postives = 344/385 (89.35%), Query Frame = 1
Query: 1 MKKVSTGERIRFADLRRRSVGGPRGDADSDV-MSEQLFVSELMDTTPSSSYEGETVRDAFVYNPRDPSVSDSPLARYDSDGEAADEVVTGTQEGVGKADLIVKEDVPEIPGETQQGSLLAVGLAAVKIGASQHGLAGPLTGARQRDDT--LSDGESLMGDPRVDHGTDHGPGGCTAEQLIGSLVSECKSLDLGTELTQGTNKYVLRMADDDWDPDLDFPGLDSSAVITDVGVDQFVLCHQAKVEPMLHITIALHKGLNGPLTGTGAMEAPGAGATMTLEVDFQTPGQEGTHHLSMPIAS-NGQLDLVRFRDSGLRSAAVSAAECEFEQLLGMGPSAKEQVPEQVQAEETVKLRNMDTGEDIDLAEIKDRVPPSLDPGELFRTKNL 1143
MKKVSTGERI+FADLRRRSVG R DADSD SEQ FVSELMDTTPSSSYEGET+ D + YNP DPSVS+SPLARY+SDGEAADEVVT TQEG+GKADLIVKEDVPEIP ETQQGSLLA GLAAV+IGASQ GL G L GARQRDDT LSDGESLMGDPRVDHGTDHGPGGCTAEQLI +LVSECKS DLG+ELTQG +KYVLRMADDDWDPDLDFPGLDSSAVITDVGVDQFVLCHQA++EPMLHITIALHKGLNGPLTGTGAMEAPGAGA++TLEVDFQTPGQEGTHH+S+PIAS +GQ DLVRFRDSG+R +A SA E E+LL P KEQV E++ EE VK+RNMDTGEDI LAEIKDRVPPSLDPGE+FR+K++
Sbjct: 93 MKKVSTGERIKFADLRRRSVGVSR-DADSDAAQSEQRFVSELMDTTPSSSYEGETLGDGYAYNPPDPSVSNSPLARYESDGEAADEVVTDTQEGIGKADLIVKEDVPEIPEETQQGSLLAAGLAAVQIGASQSGLGGLLAGARQRDDTMTLSDGESLMGDPRVDHGTDHGPGGCTAEQLIRALVSECKSRDLGSELTQGADKYVLRMADDDWDPDLDFPGLDSSAVITDVGVDQFVLCHQAQIEPMLHITIALHKGLNGPLTGTGAMEAPGAGASITLEVDFQTPGQEGTHHMSVPIASESGQRDLVRFRDSGVRGSAASADAAEVEKLLRTPPGNKEQVVEEIGIEEAVKVRNMDTGEDITLAEIKDRVPPSLDPGEVFRSKDV 476
BLAST of mRNA_M-pyrifera_M_contig13579.6005.1 vs. uniprot
Match: D7FJ13_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ13_ECTSI) HSP 1 Score: 287 bits (735), Expect = 7.440e-94 Identity = 145/179 (81.01%), Postives = 161/179 (89.94%), Query Frame = 1
Query: 610 MADDDWDPDLDFPGLDSSAVITDVGVDQFVLCHQAKVEPMLHITIALHKGLNGPLTGTGAMEAPGAGATMTLEVDFQTPGQEGTHHLSMPIAS-NGQLDLVRFRDSGLRSAAVSAAECEFEQLLGMGPSAKEQVPEQVQAEETVKLRNMDTGEDIDLAEIKDRVPPSLDPGELFRTKNL 1143
MADDDWDPDLDFPGLDSSAVITDVGVDQFVLCHQA++EPMLHITIALHKGLNGPLTGTGAMEAPGAGA+MTLEVDFQTPGQEGTHH+S+PIAS +GQ DLVRFRDSG+R +A SA E E+LL PS KE+V ++ EE VKLRNMDTGEDI LAEIKDRVPPSLDPGE+FR+K++
Sbjct: 1 MADDDWDPDLDFPGLDSSAVITDVGVDQFVLCHQAQIEPMLHITIALHKGLNGPLTGTGAMEAPGAGASMTLEVDFQTPGQEGTHHMSVPIASESGQRDLVRFRDSGVRGSAASADAAEVEKLLRTPPSNKEKVVGEIGMEEAVKLRNMDTGEDITLAEIKDRVPPSLDPGEVFRSKDV 179
BLAST of mRNA_M-pyrifera_M_contig13579.6005.1 vs. uniprot
Match: A0A835ZDT3_9STRA (CRIM domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDT3_9STRA) HSP 1 Score: 141 bits (355), Expect = 9.450e-35 Identity = 129/398 (32.41%), Postives = 186/398 (46.73%), Query Frame = 1
Query: 1 MKKVSTGERIRFADLRRRSVGGPRGDADSDVMSEQLFVSELMDTTPSSSYEGETVRDAFVYNPRDPSVSDSPLARYDSDGEAADEVVTGTQ--EGVGKADLIVKEDVPEIPG--ETQQGSLLAVGLAAVKIGASQH---GLAG--PLTGARQRDDTLSDGESLMGDPRVDHGTDHGP----GGCTAEQLIGSLVSECKSLDLGTEL-TQGTNKYVLRMADDDWDPDLDFPGLDSSAVITDVGVDQFVLCHQAKVEPMLHITIALHKGLNGPLTGTGAMEAPGAGATMTLEVDFQTPGQEGTHH--------LSMPIASNGQLDLVRFRDSGLRSAAVSAAECEFEQLLGMGPSAKEQVPEQVQAEETVKLRNMDTGEDIDLAEIKDRVPPSLDPGELF 1128
MKK+STGER+ D+RR D+ + EQ+ V ELMDTTPSSS+ + RD ++Y D + + Y SD + A+ VV+G+ EG DL K +V ++P ++ SLL+ LAAVK Q G AG PL A + LS ES + GGC+A QLI +++ EC++ D+ L + + + LR+ADD PDLDFP LDS+A I DVGVD+FVLC P+L + G G ++ L+V PG+E L P+ L R + R++ +S + PSA ++RN+DTGE+I++ + VPP + P LF
Sbjct: 1 MKKISTGERVNLQDIRRGIDQLRLSHTDAAIAGEQMLVEELMDTTPSSSFGEDAWRDGYIY---DGAAGGASPKDY-SDDDGAEAVVSGSYPPEGQESQDLFEKVEVAKLPDSQDSNPTSLLSGALAAVKSQEQQGPGIGSAGWSPLM-ASIMESGLSRSESXXXXXXXXXXXEEADMADTGGCSARQLISAVLKECQASDIAPILHNRPPHDFDLRIADDG-QPDLDFPELDSAAAIIDVGVDEFVLCEAGGAVPLLVVEXXXXXXXXXXXKG---------GYSLVLQVSLFEPGREDQRRSMCLPIELLPDPLWYGASTTLQTRRRTSSRTSGISG------EGGSNDPSA------------LTRIRNIDTGEEINVGDYDSMVPPGVSPQRLF 365 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig13579.6005.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig13579.6005.1 >prot_M-pyrifera_M_contig13579.6005.1 ID=prot_M-pyrifera_M_contig13579.6005.1|Name=mRNA_M-pyrifera_M_contig13579.6005.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=383bp MKKVSTGERIRFADLRRRSVGGPRGDADSDVMSEQLFVSELMDTTPSSSYback to top mRNA from alignment at M-pyrifera_M_contig13579:2978..5877- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig13579.6005.1 ID=mRNA_M-pyrifera_M_contig13579.6005.1|Name=mRNA_M-pyrifera_M_contig13579.6005.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=2900bp|location=Sequence derived from alignment at M-pyrifera_M_contig13579:2978..5877- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig13579:2978..5877- >mRNA_M-pyrifera_M_contig13579.6005.1 ID=mRNA_M-pyrifera_M_contig13579.6005.1|Name=mRNA_M-pyrifera_M_contig13579.6005.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2298bp|location=Sequence derived from alignment at M-pyrifera_M_contig13579:2978..5877- (Macrocystis pyrifera P11B4 male)back to top |