mRNA_M-pyrifera_M_contig13533.5985.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig13533.5985.1 vs. uniprot
Match: A0A6H5JEV9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEV9_9PHAE) HSP 1 Score: 401 bits (1031), Expect = 3.980e-128 Identity = 200/278 (71.94%), Postives = 230/278 (82.73%), Query Frame = 1
Query: 1 EEEEGLLDRPLWSYVSDRITRLLTEGLGDRCVLARPLCGAAGEDGEDFRGIPGPRGWNPRSPPPPDGCFSFGGDEGEGTHMKHPLLTVGLIVDSVNAGRLVDKGPPAEDGPAARKFREFWGDKSELRRFKDGSIVEAVVWKGKGAQRHRVV---ARHVLARHDPSRCAESSKRSKQNQNAVRFRGNELLGMVAVGGLEEGAAEDDDLTRSALKALEKLMEKAKAVEGMPLRVESLQASSPLLRYTSLLPPVPHPLATSPGEAAVVFPSQSTRITSQVQ 825
+EEEGLLD+PLW +VSDR+T +L EGLGDRCVLARPLCG AGE DF+GIPGPRGW+PR+PPP GG GEG PLLTVGLIV+ AGRLVDKGPPAEDGPAARKFR+FWG KSELRRFKDGSIVEAVVWKGKGAQRHRVV RHVL RHDP RCA+SS +++ +AVRFRGNELLG+V VGG E G+AEDDDLTRSA+KAL+ L E+AKA EGMPL+VE+LQA+SPLLRYTSLLPP PHPLA S GE+ PS++++I+SQV+
Sbjct: 574 QEEEGLLDKPLWRHVSDRVTGILREGLGDRCVLARPLCGVAGEAAHDFQGIPGPRGWHPRNPPP----AGVGGGSGEGKRKTLPLLTVGLIVNPTFAGRLVDKGPPAEDGPAARKFRDFWGSKSELRRFKDGSIVEAVVWKGKGAQRHRVVEQVVRHVLGRHDPLRCADSSSAKQRDDHAVRFRGNELLGLVTVGGTEAGSAEDDDLTRSAIKALQVLQERAKAAEGMPLKVEALQAASPLLRYTSLLPPAPHPLANSHGESPAPLPSKASKISSQVE 847
BLAST of mRNA_M-pyrifera_M_contig13533.5985.1 vs. uniprot
Match: D7FGX0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGX0_ECTSI) HSP 1 Score: 395 bits (1016), Expect = 1.580e-125 Identity = 201/281 (71.53%), Postives = 231/281 (82.21%), Query Frame = 1
Query: 1 EEEEGLLDRPLWSYVSDRITRLLTEGLGDRCVLARPLCGAAGEDGEDFRGIPGPRGWNPRSPPPPDGCFSFGGDEGEGTHMKHPLLTVGLIVDSVNAGRLVDKGPPAEDGPAARKFREFWGDKSELRRFKDGSIVEAVVWKGKGAQRHRV---VARHVLARHDPSRCAESS---KRSKQNQNAVRFRGNELLGMVAVGGLEEGAAEDDDLTRSALKALEKLMEKAKAVEGMPLRVESLQASSPLLRYTSLLPPVPHPLATSPGEAAVVFPSQSTRITSQVQ 825
EEEEGLLDRPLW +VSDR+T +L EGLGDRCVLARPLCG AGE DF+GIPGPRGW+P +PPP S GG GEG PLLTVGLIV+ AGRLVDKGPPAEDGPAARKFR+FWG KSELRRFKDGSIVEAVVWKGKGAQRHRV V RHVL RHDP RCA+SS ++ +++ +AVRFRGNELLG+V VGG E +AEDDDLTRSA+KAL+ L E+AKA EGMPL+VE+LQA+SPLLRYTSLLPP PHPLA S GE+ PS++++I+SQV+
Sbjct: 569 EEEEGLLDRPLWRHVSDRVTGILREGLGDRCVLARPLCGVAGEAAHDFQGIPGPRGWHPHNPPP----ASVGGGSGEGKRKNPPLLTVGLIVNPTFAGRLVDKGPPAEDGPAARKFRDFWGGKSELRRFKDGSIVEAVVWKGKGAQRHRVIEQVVRHVLGRHDPLRCADSSSAKQKQRRDGHAVRFRGNELLGLVTVGGSEAVSAEDDDLTRSAIKALQLLQERAKAAEGMPLKVEALQAASPLLRYTSLLPPAPHPLANSHGESPAPLPSKASKISSQVE 845
BLAST of mRNA_M-pyrifera_M_contig13533.5985.1 vs. uniprot
Match: W7TWG8_9STRA (Nrap protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TWG8_9STRA) HSP 1 Score: 134 bits (336), Expect = 1.280e-31 Identity = 103/278 (37.05%), Postives = 136/278 (48.92%), Query Frame = 1
Query: 1 EEEEGLLDRPLWSYVSDRITRLLTEGLGDRCVLARPLCGAAGEDGEDFRGIPGPRGWNPRSPPPPDGCFSFGGDEGEGTHMKHPLLTVGLIVDSVNAGRLVDKGPPAEDGPAARKFREFWGDKSELRRFKDGSIVEAVVWKGKGA-------QRHRVVA---RHVLARHDPSRCAESSKRSKQNQNAVRFRGNELL------------GMVAVGGLEEGAAEDDDLTRSALKALEKLMEKAKAVEG----MPLRVESLQASSPLLRYTSLLPPVPHPL 756
EEE D P+ SY+S + ++L+ LG+R R L A E G G RGW + VG+ +D + A RLVD+GPPAE+ AR+FR FWG K+ELRRFKDG+IVEAVVW G+GA RH++V R+ L H R S S +R GNEL+ G A L + + +T++AL AL+ L K K EG +PL +E++ SP LR+TSL PP PHPL
Sbjct: 353 EEERVCCDLPVASYLSRKAAQILSLALGNRARRVRALPAACCV--EQNLGRKGERGW----------------------------VWVGISIDPMQALRLVDRGPPAEEETKAREFRAFWGQKAELRRFKDGAIVEAVVWGGEGAVTAYTGGDRHKIVEEIMRYTLGYHLRHRFPPSVATS------LRILGNELVMLLELSKERSANGASASSSLPSPSLTPEAMTKAALTALDSLTTKLK--EGVSSCLPLAIEAVAPLSPALRHTSLFPPFPHPL 592
BLAST of mRNA_M-pyrifera_M_contig13533.5985.1 vs. uniprot
Match: A0A4D9D5Y6_9STRA (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D5Y6_9STRA) HSP 1 Score: 133 bits (334), Expect = 2.460e-31 Identity = 101/271 (37.27%), Postives = 134/271 (49.45%), Query Frame = 1
Query: 1 EEEEGLLDRPLWSYVSDRITRLLTEGLGDRCVLARPLCGAAGEDGEDFRGIPGPRGWNPRSPPPPDGCFSFGGDEGEGTHMKHPLLTVGLIVDSVNAGRLVDKGPPAEDGPAARKFREFWGDKSELRRFKDGSIVEAVVWKGKGAQRHRVVA---RHVLARHDPSRCAESSKRSKQNQNAVRFRGNEL------------LGMVAVGGLEEGAAEDDDLTRSALKALEKLMEKAKAVEG----MPLRVESLQASSPLLRYTSLLPPVPHPL 756
EEE D P+ SY+S + ++L+ LG+R R L A E G G RGW + VG+ +D + A RLVD+GPPAE+ AR+FR FWG K+ELRRFKDG+IVEAVVW+G G RH++V R+ L H R S S +R GNEL G + L + + +T++AL AL+ L K K EG +PL +E++ SP LR+TSL PP PHPL
Sbjct: 621 EEERVCCDLPVSSYLSRKAAQILSLALGNRAHRVRALPAACCV--EQNVGRKGERGW----------------------------VWVGISIDPMQALRLVDRGPPAEEETKAREFRAFWGQKAELRRFKDGAIVEAVVWRG-GGDRHKIVEEIMRYTLGYHLRHRFPPSVATS------LRILGNELDMLLELSKERSANGASSSSSLPSPSLTPEAMTKAALTALDSLTTKLK--EGVSSCLPLAIEAVAPLSPALRHTSLFPPFPHPL 852
BLAST of mRNA_M-pyrifera_M_contig13533.5985.1 vs. uniprot
Match: A0A150G133_GONPE (Uncharacterized protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150G133_GONPE) HSP 1 Score: 121 bits (304), Expect = 2.340e-27 Identity = 91/260 (35.00%), Postives = 126/260 (48.46%), Query Frame = 1
Query: 22 DRPLWSYVSDRITRLLTEGLGDRC----VLARPLCGAAGEDGEDFRGIPGPRGWNPRSPPPPDGCFSFGGDEGEGTHMKHPLLTVGLIVDSVNAGRLVDKGPPAEDGPAARKFREFWGDKSELRRFKDGSIVEAVVWKGKGAQRHRV---VARHVLARHDPSRCAESSKRSKQNQNAVRFRGNELLGMVAVGGLEEGAAEDDDLTRSALKALEKLMEKAKAVEGMPLRVESLQASSPLLRYTSLLPPVPHPLATSPGEAA 780
DR LW ++ +L+ + L DR V+ RP+ AA + +D G EG G + VG ++D + A RLVD GP A+DGPAA +FR FWGDK+ELRR++DG I E VW+ +RH + + HV ARH P A + A L VA G + AA R+A A EKL ++ +++EG+ L+V +Q S + R T+ LPP PHPLA P A
Sbjct: 609 DRSLWRDQEVQVEQLVRQALSDRAKAVRVVRRPM--AASLEPDDLA----------------HGLLPLAATEGPGGGAA---IWVGAVMDPLAASRLVDVGPAADDGPAAARFRRFWGDKAELRRWQDGKITETAVWEVAAHERHAIPDLILAHVAARHLPPGTAVAG--------AAACLDWALGCRVAPPGADLAAA------RAAEAAAEKLGKQLRSLEGLALKVIGVQPLSAVARGTAPLPPQPHPLAGGPAAGA 833
BLAST of mRNA_M-pyrifera_M_contig13533.5985.1 vs. uniprot
Match: A0A7C8YD28_OPUST (Uncharacterized protein n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C8YD28_OPUST) HSP 1 Score: 118 bits (296), Expect = 2.370e-26 Identity = 88/254 (34.65%), Postives = 123/254 (48.43%), Query Frame = 1
Query: 22 DRPLWSYVSDRITRLLTEGLGDRCVLARPLCGAAGEDGEDFRGIPGPRGWNPRSPPPPDGCFSFGGDEGEGTHMKHPLLTVGLIVDSVN-AGRLVDKGPPAEDGPAARKFREFWGDKSELRRFKDGSIVEAVVWKGKGAQRHRVVAR---HVLARHDPSRCAESSKRSKQNQNAVRFRGNELLGMVAVGGLEEGAAEDDDLTRSALKALEKLMEKAKAVEGMPLRVESLQASSPLLRYTSLLPPVPHPLATSPG 771
D W ++ LL +GLGDR L R + R W P+ DG S K PLL +G+ + S+ A RLVD GP AE A KFR+FWG+KSELRRFKDG+I E+ VW+ K +RH +V + HVL+RH + ++ ++L + G A+ T S L+A E L ++ + ++ +PLRV S+Q P R T++ PP PHPLA G
Sbjct: 168 DNECWRMYEAKVHSLLLQGLGDRANLVRVIW----------------RNW-PKEYHVEDGFSSLD---------KEPLL-IGVALSSLEKAFRLVDIGPNAEQKEEAAKFRKFWGEKSELRRFKDGTIAESTVWECKQWERHLIVKKITEHVLSRH-----------LSLTKESIAVTADQLDFSLGYGD-----ADPISFTGSLLEAYEVLAKRLRLLDDIPLRVSSVQPLDPAFRCTAVFPPEPHPLAGGKG 378
BLAST of mRNA_M-pyrifera_M_contig13533.5985.1 vs. uniprot
Match: A0A7R9U8W3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U8W3_9STRA) HSP 1 Score: 117 bits (293), Expect = 6.530e-26 Identity = 104/292 (35.62%), Postives = 131/292 (44.86%), Query Frame = 1
Query: 52 RITRLLTEGLGDR------------CVLARPLCGAAGEDGEDFRGIPGPRGWNPRSPPPPDGCFSFGGD-------------EGEGTHMKHPLLTVGLIVDSVNAGRLVDKGPPAEDGPAARKFREFWGDKSELRRFKDGSIVEAVVWKGKGAQRHRV---VARHVLARHDPSRCAESSKRSKQNQNAVRFRGNELLGMVAVGGLEEGAAEDDDLT---RSALKALEKLME--KAKAVEGMPLRVESLQASSPLLRYTSLLPPVPHPLATSPGEAAVVFPSQSTRITSQVQD 828
RI LL + LGDR C L RPL +G+ G G G DG F G+ E L GL +D AGR VD+GP A D AA+ F+ WG K+ELRRFKDGS+VE VVW A R V + HVLA HD SR E FRG EL +V EE AA + R+A+KA E + + ++ +++ +PLRV P LRYTS++ P+PHPL PG F + ITS D
Sbjct: 574 RIGHLLEKALGDRLRGRGRGKHEKGCAL-RPLVAPSGDLGGAADGYYRVGGL--------DGAFLLAGELPRSVDPRVQARQESNAASDASDALWFGLRLDLATAGRHVDRGPDAADREAAKAFQSLWGSKAELRRFKDGSLVETVVWGNNTAPRSAVLREIVEHVLATHDASRHVEGK--------WPCFRGMELDALVN----EEVAANEVQALPSFRTAMKAFEAVRDVLQSASLQVLPLRVTRAAPVGPYLRYTSMIQPLPHPLL--PG-----FEKSAALITSDAAD 837
BLAST of mRNA_M-pyrifera_M_contig13533.5985.1 vs. uniprot
Match: A0A2I0X035_9ASPA (Uncharacterized protein n=1 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0X035_9ASPA) HSP 1 Score: 115 bits (289), Expect = 2.170e-25 Identity = 83/260 (31.92%), Postives = 129/260 (49.62%), Query Frame = 1
Query: 10 EGLLDRPLWSYVSDRITRLLTEGLGDRCVLARPLCGAAGEDGEDFRGIPGPRGWNPRSPPPPDGCFSFGGDEGEGTHMKHPLLTVGLIVDSVN-AGRLVDKGPPAEDGPAARKFREFWGDKSELRRFKDGSIVEAVVWKGKGAQRHRVVAR---HVLARHDPSRCAESSKRSKQNQNAVRFRGNELLGMVAVGGLEEGAAEDDDLTRSALKALEKLMEKAKAVEGMPLRVESLQASSPLLRYTSLLPPVPHPLATSPGEA 777
E LD W V + +L +GL DR L R G+A P WN +G +FG + P+L VGL++ S RLVD GP AE+ A KFR+FWGDK+ELRRF+DG+I E+ VW+ QRH ++ R +V+++H +Q + + ++L + +GG + ++ + S L+ E L ++ + ++ +PLR+ S+Q R+T++ PP PHPL G A
Sbjct: 402 EFCLDEERWGLVEKDVQSVLQQGLSDRAKLVRVTWGSA------------PSNWNIN-----EGYENFG---------EEPML-VGLLLSSEEKCFRLVDIGPHAENNEEAAKFRKFWGDKAELRRFRDGTIAESTVWECPPWQRHLIMKRITEYVISKH-----------FLLSQGDIVYAVDQLDFSIHLGGKDPISS-----STSLLETFETLSKRLRLLDDIPLRISSVQPLDAAFRHTAVFPPEPHPLVYEKGSA 618
BLAST of mRNA_M-pyrifera_M_contig13533.5985.1 vs. uniprot
Match: A0A835TK30_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835TK30_9CHLO) HSP 1 Score: 115 bits (289), Expect = 2.310e-25 Identity = 91/257 (35.41%), Postives = 125/257 (48.64%), Query Frame = 1
Query: 22 DRPLWSYVSDRITRLLTEGLGDRC----VLARPLCGAAGEDGEDFRGIPGPRGWNPRSPPPPDGCFSFGGDEGEGTHMKHPLLTVGLIVDSVNAGRLVDKGPPAEDGPAARKFREFWGDKSELRRFKDGSIVEAVVWKGKGAQRHRV---VARHVLARHDPSRCAESSKRSKQNQNAVRFRGNELLGMVAVGGLEEGAAEDDDLTRSALKALEKLMEKAKAVEGMPLRVESLQASSPLLRYTSLLPPVPHPLATSPG 771
DR L + +L + L DR VL RP C A D + RG+ G + + D G + G G+ + P+ VG ++D + A RLVD GP A+DGPAA +FR FWG++SELRR+ DG I E VW+ AQRH + + RHV RH P A V L ++ G+ D EKL ++ +A+EG+ L+V S+Q S + R T+ LPP PHPLA G
Sbjct: 619 DRALSRDQEAHLEQLARQALTDRAKVVRVLRRPTCPTAQPD-DLARGLVPLAGESGAASEEEDA----GPESGSGS-VSIPIW-VGAVLDPLLACRLVDIGPSADDGPAAARFRRFWGERSELRRWADGKITETAVWELPQAQRHTIPDIIMRHVATRHLPVGAA------------VATAAGALDWALSARACPAGSGTDVAAAXXXXXXAEKLSKQLRALEGLALKVVSVQPLSGVARGTAPLPPQPHPLAGGAG 856
BLAST of mRNA_M-pyrifera_M_contig13533.5985.1 vs. uniprot
Match: W9RT56_9ROSA (Uncharacterized protein n=2 Tax=Morus notabilis TaxID=981085 RepID=W9RT56_9ROSA) HSP 1 Score: 115 bits (288), Expect = 2.940e-25 Identity = 83/251 (33.07%), Postives = 119/251 (47.41%), Query Frame = 1
Query: 19 LDRPLWSYVSDRITRLLTEGLGDRCVLARPLCGAAGEDGEDFRGIPGPRGWNPRSPPPPDGCFSFGGDEGEGTHMKHPLLTVGLIVDSVN-AGRLVDKGPPAEDGPAARKFREFWGDKSELRRFKDGSIVEAVVWKGKGAQRH---RVVARHVLARHDPSRCAESSKRSKQNQNAVRFRGNELLGMVAVGGLEEGAAEDDDLTRSALKALEKLMEKAKAVEGMPLRVESLQASSPLLRYTSLLPPVPHPLA 759
LD W ++ +LTEGL DR L R + W P CF + G PLL +G+ ++S+ A R+VD GP E+ A KFR+FWG+ +ELRRFKDG I E+VVWK + +RH + +A +VL RH S +N +V GA + + S L+A E L ++ +A+E +PL+V ++Q R+TS+ PP PHPLA
Sbjct: 393 LDDECWRLYEQKVHNVLTEGLSDRVKLVRVI-------------------WRNT----PSECFI---ENGLSAFSSEPLL-IGISINSLEKAFRVVDIGPNPENKDEALKFRKFWGEIAELRRFKDGRIAESVVWKSEQWERHLIIKTIAEYVLIRH----------LSLPKENITHIVDQLDFSLV------HGATDPISYSLSLLEAFEDLSKRLRAIEDIPLKVSTVQPLDSAFRFTSVYPPEPHPLA 600 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig13533.5985.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig13533.5985.1 >prot_M-pyrifera_M_contig13533.5985.1 ID=prot_M-pyrifera_M_contig13533.5985.1|Name=mRNA_M-pyrifera_M_contig13533.5985.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=279bp EEEEGLLDRPLWSYVSDRITRLLTEGLGDRCVLARPLCGAAGEDGEDFRGback to top mRNA from alignment at M-pyrifera_M_contig13533:1241..7751+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig13533.5985.1 ID=mRNA_M-pyrifera_M_contig13533.5985.1|Name=mRNA_M-pyrifera_M_contig13533.5985.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=6511bp|location=Sequence derived from alignment at M-pyrifera_M_contig13533:1241..7751+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig13533:1241..7751+ >mRNA_M-pyrifera_M_contig13533.5985.1 ID=mRNA_M-pyrifera_M_contig13533.5985.1|Name=mRNA_M-pyrifera_M_contig13533.5985.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1674bp|location=Sequence derived from alignment at M-pyrifera_M_contig13533:1241..7751+ (Macrocystis pyrifera P11B4 male)back to top |