mRNA_M-pyrifera_M_contig13533.5985.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig13533.5985.1
Unique NamemRNA_M-pyrifera_M_contig13533.5985.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig13533.5985.1 vs. uniprot
Match: A0A6H5JEV9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEV9_9PHAE)

HSP 1 Score: 401 bits (1031), Expect = 3.980e-128
Identity = 200/278 (71.94%), Postives = 230/278 (82.73%), Query Frame = 1
Query:    1 EEEEGLLDRPLWSYVSDRITRLLTEGLGDRCVLARPLCGAAGEDGEDFRGIPGPRGWNPRSPPPPDGCFSFGGDEGEGTHMKHPLLTVGLIVDSVNAGRLVDKGPPAEDGPAARKFREFWGDKSELRRFKDGSIVEAVVWKGKGAQRHRVV---ARHVLARHDPSRCAESSKRSKQNQNAVRFRGNELLGMVAVGGLEEGAAEDDDLTRSALKALEKLMEKAKAVEGMPLRVESLQASSPLLRYTSLLPPVPHPLATSPGEAAVVFPSQSTRITSQVQ 825
            +EEEGLLD+PLW +VSDR+T +L EGLGDRCVLARPLCG AGE   DF+GIPGPRGW+PR+PPP       GG  GEG     PLLTVGLIV+   AGRLVDKGPPAEDGPAARKFR+FWG KSELRRFKDGSIVEAVVWKGKGAQRHRVV    RHVL RHDP RCA+SS   +++ +AVRFRGNELLG+V VGG E G+AEDDDLTRSA+KAL+ L E+AKA EGMPL+VE+LQA+SPLLRYTSLLPP PHPLA S GE+    PS++++I+SQV+
Sbjct:  574 QEEEGLLDKPLWRHVSDRVTGILREGLGDRCVLARPLCGVAGEAAHDFQGIPGPRGWHPRNPPP----AGVGGGSGEGKRKTLPLLTVGLIVNPTFAGRLVDKGPPAEDGPAARKFRDFWGSKSELRRFKDGSIVEAVVWKGKGAQRHRVVEQVVRHVLGRHDPLRCADSSSAKQRDDHAVRFRGNELLGLVTVGGTEAGSAEDDDLTRSAIKALQVLQERAKAAEGMPLKVEALQAASPLLRYTSLLPPAPHPLANSHGESPAPLPSKASKISSQVE 847          
BLAST of mRNA_M-pyrifera_M_contig13533.5985.1 vs. uniprot
Match: D7FGX0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGX0_ECTSI)

HSP 1 Score: 395 bits (1016), Expect = 1.580e-125
Identity = 201/281 (71.53%), Postives = 231/281 (82.21%), Query Frame = 1
Query:    1 EEEEGLLDRPLWSYVSDRITRLLTEGLGDRCVLARPLCGAAGEDGEDFRGIPGPRGWNPRSPPPPDGCFSFGGDEGEGTHMKHPLLTVGLIVDSVNAGRLVDKGPPAEDGPAARKFREFWGDKSELRRFKDGSIVEAVVWKGKGAQRHRV---VARHVLARHDPSRCAESS---KRSKQNQNAVRFRGNELLGMVAVGGLEEGAAEDDDLTRSALKALEKLMEKAKAVEGMPLRVESLQASSPLLRYTSLLPPVPHPLATSPGEAAVVFPSQSTRITSQVQ 825
            EEEEGLLDRPLW +VSDR+T +L EGLGDRCVLARPLCG AGE   DF+GIPGPRGW+P +PPP     S GG  GEG     PLLTVGLIV+   AGRLVDKGPPAEDGPAARKFR+FWG KSELRRFKDGSIVEAVVWKGKGAQRHRV   V RHVL RHDP RCA+SS   ++ +++ +AVRFRGNELLG+V VGG E  +AEDDDLTRSA+KAL+ L E+AKA EGMPL+VE+LQA+SPLLRYTSLLPP PHPLA S GE+    PS++++I+SQV+
Sbjct:  569 EEEEGLLDRPLWRHVSDRVTGILREGLGDRCVLARPLCGVAGEAAHDFQGIPGPRGWHPHNPPP----ASVGGGSGEGKRKNPPLLTVGLIVNPTFAGRLVDKGPPAEDGPAARKFRDFWGGKSELRRFKDGSIVEAVVWKGKGAQRHRVIEQVVRHVLGRHDPLRCADSSSAKQKQRRDGHAVRFRGNELLGLVTVGGSEAVSAEDDDLTRSAIKALQLLQERAKAAEGMPLKVEALQAASPLLRYTSLLPPAPHPLANSHGESPAPLPSKASKISSQVE 845          
BLAST of mRNA_M-pyrifera_M_contig13533.5985.1 vs. uniprot
Match: W7TWG8_9STRA (Nrap protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TWG8_9STRA)

HSP 1 Score: 134 bits (336), Expect = 1.280e-31
Identity = 103/278 (37.05%), Postives = 136/278 (48.92%), Query Frame = 1
Query:    1 EEEEGLLDRPLWSYVSDRITRLLTEGLGDRCVLARPLCGAAGEDGEDFRGIPGPRGWNPRSPPPPDGCFSFGGDEGEGTHMKHPLLTVGLIVDSVNAGRLVDKGPPAEDGPAARKFREFWGDKSELRRFKDGSIVEAVVWKGKGA-------QRHRVVA---RHVLARHDPSRCAESSKRSKQNQNAVRFRGNELL------------GMVAVGGLEEGAAEDDDLTRSALKALEKLMEKAKAVEG----MPLRVESLQASSPLLRYTSLLPPVPHPL 756
            EEE    D P+ SY+S +  ++L+  LG+R    R L  A     E   G  G RGW                            + VG+ +D + A RLVD+GPPAE+   AR+FR FWG K+ELRRFKDG+IVEAVVW G+GA        RH++V    R+ L  H   R   S   S      +R  GNEL+            G  A   L   +   + +T++AL AL+ L  K K  EG    +PL +E++   SP LR+TSL PP PHPL
Sbjct:  353 EEERVCCDLPVASYLSRKAAQILSLALGNRARRVRALPAACCV--EQNLGRKGERGW----------------------------VWVGISIDPMQALRLVDRGPPAEEETKAREFRAFWGQKAELRRFKDGAIVEAVVWGGEGAVTAYTGGDRHKIVEEIMRYTLGYHLRHRFPPSVATS------LRILGNELVMLLELSKERSANGASASSSLPSPSLTPEAMTKAALTALDSLTTKLK--EGVSSCLPLAIEAVAPLSPALRHTSLFPPFPHPL 592          
BLAST of mRNA_M-pyrifera_M_contig13533.5985.1 vs. uniprot
Match: A0A4D9D5Y6_9STRA (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D5Y6_9STRA)

HSP 1 Score: 133 bits (334), Expect = 2.460e-31
Identity = 101/271 (37.27%), Postives = 134/271 (49.45%), Query Frame = 1
Query:    1 EEEEGLLDRPLWSYVSDRITRLLTEGLGDRCVLARPLCGAAGEDGEDFRGIPGPRGWNPRSPPPPDGCFSFGGDEGEGTHMKHPLLTVGLIVDSVNAGRLVDKGPPAEDGPAARKFREFWGDKSELRRFKDGSIVEAVVWKGKGAQRHRVVA---RHVLARHDPSRCAESSKRSKQNQNAVRFRGNEL------------LGMVAVGGLEEGAAEDDDLTRSALKALEKLMEKAKAVEG----MPLRVESLQASSPLLRYTSLLPPVPHPL 756
            EEE    D P+ SY+S +  ++L+  LG+R    R L  A     E   G  G RGW                            + VG+ +D + A RLVD+GPPAE+   AR+FR FWG K+ELRRFKDG+IVEAVVW+G G  RH++V    R+ L  H   R   S   S      +R  GNEL             G  +   L   +   + +T++AL AL+ L  K K  EG    +PL +E++   SP LR+TSL PP PHPL
Sbjct:  621 EEERVCCDLPVSSYLSRKAAQILSLALGNRAHRVRALPAACCV--EQNVGRKGERGW----------------------------VWVGISIDPMQALRLVDRGPPAEEETKAREFRAFWGQKAELRRFKDGAIVEAVVWRG-GGDRHKIVEEIMRYTLGYHLRHRFPPSVATS------LRILGNELDMLLELSKERSANGASSSSSLPSPSLTPEAMTKAALTALDSLTTKLK--EGVSSCLPLAIEAVAPLSPALRHTSLFPPFPHPL 852          
BLAST of mRNA_M-pyrifera_M_contig13533.5985.1 vs. uniprot
Match: A0A150G133_GONPE (Uncharacterized protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150G133_GONPE)

HSP 1 Score: 121 bits (304), Expect = 2.340e-27
Identity = 91/260 (35.00%), Postives = 126/260 (48.46%), Query Frame = 1
Query:   22 DRPLWSYVSDRITRLLTEGLGDRC----VLARPLCGAAGEDGEDFRGIPGPRGWNPRSPPPPDGCFSFGGDEGEGTHMKHPLLTVGLIVDSVNAGRLVDKGPPAEDGPAARKFREFWGDKSELRRFKDGSIVEAVVWKGKGAQRHRV---VARHVLARHDPSRCAESSKRSKQNQNAVRFRGNELLGMVAVGGLEEGAAEDDDLTRSALKALEKLMEKAKAVEGMPLRVESLQASSPLLRYTSLLPPVPHPLATSPGEAA 780
            DR LW     ++ +L+ + L DR     V+ RP+  AA  + +D                   G       EG G       + VG ++D + A RLVD GP A+DGPAA +FR FWGDK+ELRR++DG I E  VW+    +RH +   +  HV ARH P   A +         A       L   VA  G +  AA      R+A  A EKL ++ +++EG+ L+V  +Q  S + R T+ LPP PHPLA  P   A
Sbjct:  609 DRSLWRDQEVQVEQLVRQALSDRAKAVRVVRRPM--AASLEPDDLA----------------HGLLPLAATEGPGGGAA---IWVGAVMDPLAASRLVDVGPAADDGPAAARFRRFWGDKAELRRWQDGKITETAVWEVAAHERHAIPDLILAHVAARHLPPGTAVAG--------AAACLDWALGCRVAPPGADLAAA------RAAEAAAEKLGKQLRSLEGLALKVIGVQPLSAVARGTAPLPPQPHPLAGGPAAGA 833          
BLAST of mRNA_M-pyrifera_M_contig13533.5985.1 vs. uniprot
Match: A0A7C8YD28_OPUST (Uncharacterized protein n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C8YD28_OPUST)

HSP 1 Score: 118 bits (296), Expect = 2.370e-26
Identity = 88/254 (34.65%), Postives = 123/254 (48.43%), Query Frame = 1
Query:   22 DRPLWSYVSDRITRLLTEGLGDRCVLARPLCGAAGEDGEDFRGIPGPRGWNPRSPPPPDGCFSFGGDEGEGTHMKHPLLTVGLIVDSVN-AGRLVDKGPPAEDGPAARKFREFWGDKSELRRFKDGSIVEAVVWKGKGAQRHRVVAR---HVLARHDPSRCAESSKRSKQNQNAVRFRGNELLGMVAVGGLEEGAAEDDDLTRSALKALEKLMEKAKAVEGMPLRVESLQASSPLLRYTSLLPPVPHPLATSPG 771
            D   W     ++  LL +GLGDR  L R +                 R W P+     DG  S           K PLL +G+ + S+  A RLVD GP AE    A KFR+FWG+KSELRRFKDG+I E+ VW+ K  +RH +V +   HVL+RH               + ++    ++L   +  G      A+    T S L+A E L ++ + ++ +PLRV S+Q   P  R T++ PP PHPLA   G
Sbjct:  168 DNECWRMYEAKVHSLLLQGLGDRANLVRVIW----------------RNW-PKEYHVEDGFSSLD---------KEPLL-IGVALSSLEKAFRLVDIGPNAEQKEEAAKFRKFWGEKSELRRFKDGTIAESTVWECKQWERHLIVKKITEHVLSRH-----------LSLTKESIAVTADQLDFSLGYGD-----ADPISFTGSLLEAYEVLAKRLRLLDDIPLRVSSVQPLDPAFRCTAVFPPEPHPLAGGKG 378          
BLAST of mRNA_M-pyrifera_M_contig13533.5985.1 vs. uniprot
Match: A0A7R9U8W3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U8W3_9STRA)

HSP 1 Score: 117 bits (293), Expect = 6.530e-26
Identity = 104/292 (35.62%), Postives = 131/292 (44.86%), Query Frame = 1
Query:   52 RITRLLTEGLGDR------------CVLARPLCGAAGEDGEDFRGIPGPRGWNPRSPPPPDGCFSFGGD-------------EGEGTHMKHPLLTVGLIVDSVNAGRLVDKGPPAEDGPAARKFREFWGDKSELRRFKDGSIVEAVVWKGKGAQRHRV---VARHVLARHDPSRCAESSKRSKQNQNAVRFRGNELLGMVAVGGLEEGAAEDDDLT---RSALKALEKLME--KAKAVEGMPLRVESLQASSPLLRYTSLLPPVPHPLATSPGEAAVVFPSQSTRITSQVQD 828
            RI  LL + LGDR            C L RPL   +G+ G    G     G         DG F   G+             E          L  GL +D   AGR VD+GP A D  AA+ F+  WG K+ELRRFKDGS+VE VVW    A R  V   +  HVLA HD SR  E             FRG EL  +V     EE AA +       R+A+KA E + +  ++ +++ +PLRV       P LRYTS++ P+PHPL   PG     F   +  ITS   D
Sbjct:  574 RIGHLLEKALGDRLRGRGRGKHEKGCAL-RPLVAPSGDLGGAADGYYRVGGL--------DGAFLLAGELPRSVDPRVQARQESNAASDASDALWFGLRLDLATAGRHVDRGPDAADREAAKAFQSLWGSKAELRRFKDGSLVETVVWGNNTAPRSAVLREIVEHVLATHDASRHVEGK--------WPCFRGMELDALVN----EEVAANEVQALPSFRTAMKAFEAVRDVLQSASLQVLPLRVTRAAPVGPYLRYTSMIQPLPHPLL--PG-----FEKSAALITSDAAD 837          
BLAST of mRNA_M-pyrifera_M_contig13533.5985.1 vs. uniprot
Match: A0A2I0X035_9ASPA (Uncharacterized protein n=1 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0X035_9ASPA)

HSP 1 Score: 115 bits (289), Expect = 2.170e-25
Identity = 83/260 (31.92%), Postives = 129/260 (49.62%), Query Frame = 1
Query:   10 EGLLDRPLWSYVSDRITRLLTEGLGDRCVLARPLCGAAGEDGEDFRGIPGPRGWNPRSPPPPDGCFSFGGDEGEGTHMKHPLLTVGLIVDSVN-AGRLVDKGPPAEDGPAARKFREFWGDKSELRRFKDGSIVEAVVWKGKGAQRHRVVAR---HVLARHDPSRCAESSKRSKQNQNAVRFRGNELLGMVAVGGLEEGAAEDDDLTRSALKALEKLMEKAKAVEGMPLRVESLQASSPLLRYTSLLPPVPHPLATSPGEA 777
            E  LD   W  V   +  +L +GL DR  L R   G+A            P  WN       +G  +FG         + P+L VGL++ S     RLVD GP AE+   A KFR+FWGDK+ELRRF+DG+I E+ VW+    QRH ++ R   +V+++H              +Q  + +  ++L   + +GG +  ++     + S L+  E L ++ + ++ +PLR+ S+Q      R+T++ PP PHPL    G A
Sbjct:  402 EFCLDEERWGLVEKDVQSVLQQGLSDRAKLVRVTWGSA------------PSNWNIN-----EGYENFG---------EEPML-VGLLLSSEEKCFRLVDIGPHAENNEEAAKFRKFWGDKAELRRFRDGTIAESTVWECPPWQRHLIMKRITEYVISKH-----------FLLSQGDIVYAVDQLDFSIHLGGKDPISS-----STSLLETFETLSKRLRLLDDIPLRISSVQPLDAAFRHTAVFPPEPHPLVYEKGSA 618          
BLAST of mRNA_M-pyrifera_M_contig13533.5985.1 vs. uniprot
Match: A0A835TK30_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835TK30_9CHLO)

HSP 1 Score: 115 bits (289), Expect = 2.310e-25
Identity = 91/257 (35.41%), Postives = 125/257 (48.64%), Query Frame = 1
Query:   22 DRPLWSYVSDRITRLLTEGLGDRC----VLARPLCGAAGEDGEDFRGIPGPRGWNPRSPPPPDGCFSFGGDEGEGTHMKHPLLTVGLIVDSVNAGRLVDKGPPAEDGPAARKFREFWGDKSELRRFKDGSIVEAVVWKGKGAQRHRV---VARHVLARHDPSRCAESSKRSKQNQNAVRFRGNELLGMVAVGGLEEGAAEDDDLTRSALKALEKLMEKAKAVEGMPLRVESLQASSPLLRYTSLLPPVPHPLATSPG 771
            DR L       + +L  + L DR     VL RP C  A  D +  RG+    G +  +    D     G + G G+ +  P+  VG ++D + A RLVD GP A+DGPAA +FR FWG++SELRR+ DG I E  VW+   AQRH +   + RHV  RH P   A            V      L   ++      G+  D           EKL ++ +A+EG+ L+V S+Q  S + R T+ LPP PHPLA   G
Sbjct:  619 DRALSRDQEAHLEQLARQALTDRAKVVRVLRRPTCPTAQPD-DLARGLVPLAGESGAASEEEDA----GPESGSGS-VSIPIW-VGAVLDPLLACRLVDIGPSADDGPAAARFRRFWGERSELRRWADGKITETAVWELPQAQRHTIPDIIMRHVATRHLPVGAA------------VATAAGALDWALSARACPAGSGTDVAAAXXXXXXAEKLSKQLRALEGLALKVVSVQPLSGVARGTAPLPPQPHPLAGGAG 856          
BLAST of mRNA_M-pyrifera_M_contig13533.5985.1 vs. uniprot
Match: W9RT56_9ROSA (Uncharacterized protein n=2 Tax=Morus notabilis TaxID=981085 RepID=W9RT56_9ROSA)

HSP 1 Score: 115 bits (288), Expect = 2.940e-25
Identity = 83/251 (33.07%), Postives = 119/251 (47.41%), Query Frame = 1
Query:   19 LDRPLWSYVSDRITRLLTEGLGDRCVLARPLCGAAGEDGEDFRGIPGPRGWNPRSPPPPDGCFSFGGDEGEGTHMKHPLLTVGLIVDSVN-AGRLVDKGPPAEDGPAARKFREFWGDKSELRRFKDGSIVEAVVWKGKGAQRH---RVVARHVLARHDPSRCAESSKRSKQNQNAVRFRGNELLGMVAVGGLEEGAAEDDDLTRSALKALEKLMEKAKAVEGMPLRVESLQASSPLLRYTSLLPPVPHPLA 759
            LD   W     ++  +LTEGL DR  L R +                   W       P  CF    + G       PLL +G+ ++S+  A R+VD GP  E+   A KFR+FWG+ +ELRRFKDG I E+VVWK +  +RH   + +A +VL RH           S   +N           +V       GA +    + S L+A E L ++ +A+E +PL+V ++Q      R+TS+ PP PHPLA
Sbjct:  393 LDDECWRLYEQKVHNVLTEGLSDRVKLVRVI-------------------WRNT----PSECFI---ENGLSAFSSEPLL-IGISINSLEKAFRVVDIGPNPENKDEALKFRKFWGEIAELRRFKDGRIAESVVWKSEQWERHLIIKTIAEYVLIRH----------LSLPKENITHIVDQLDFSLV------HGATDPISYSLSLLEAFEDLSKRLRAIEDIPLKVSTVQPLDSAFRFTSVYPPEPHPLA 600          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig13533.5985.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JEV9_9PHAE3.980e-12871.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FGX0_ECTSI1.580e-12571.53Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
W7TWG8_9STRA1.280e-3137.05Nrap protein n=1 Tax=Nannochloropsis gaditana TaxI... [more]
A0A4D9D5Y6_9STRA2.460e-3137.27Uncharacterized protein n=3 Tax=Monodopsidaceae Ta... [more]
A0A150G133_GONPE2.340e-2735.00Uncharacterized protein n=1 Tax=Gonium pectorale T... [more]
A0A7C8YD28_OPUST2.370e-2634.65Uncharacterized protein n=1 Tax=Opuntia streptacan... [more]
A0A7R9U8W3_9STRA6.530e-2635.62Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A2I0X035_9ASPA2.170e-2531.92Uncharacterized protein n=1 Tax=Dendrobium catenat... [more]
A0A835TK30_9CHLO2.310e-2535.41Uncharacterized protein n=1 Tax=Chlamydomonas schl... [more]
W9RT56_9ROSA2.940e-2533.07Uncharacterized protein n=2 Tax=Morus notabilis Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig13533contigM-pyrifera_M_contig13533:1241..7751 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score397.9
Seed ortholog evalue3.9e-108
Seed eggNOG ortholog2880.D7FGX0
Preferred nameNOL6
KEGG koko:K08018,ko:K14544
KEGG Pathwayko03008,ko04010,ko04015,ko04530,map03008,map04010,map04015,map04530
Hectar predicted targeting categoryother localisation
GOsGO:0000228,GO:0000375,GO:0000377,GO:0000398,GO:0000462,GO:0000793,GO:0000794,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005694,GO:0005730,GO:0005737,GO:0005739,GO:0006139,GO:0006364,GO:0006396,GO:0006397,GO:0006403,GO:0006405,GO:0006409,GO:0006611,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0008104,GO:0008150,GO:0008152,GO:0008380,GO:0009987,GO:0010467,GO:0015031,GO:0015833,GO:0015931,GO:0016070,GO:0016071,GO:0016072,GO:0022613,GO:0030490,GO:0030515,GO:0030628,GO:0030684,GO:0030686,GO:0031503,GO:0031974,GO:0031981,GO:0032040,GO:0032545,GO:0032991,GO:0033036,GO:0034456,GO:0034470,GO:0034613,GO:0034641,GO:0034660,GO:0036002,GO:0042254,GO:0042274,GO:0042886,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044452,GO:0044464,GO:0045184,GO:0046483,GO:0046907,GO:0050657,GO:0050658,GO:0051031,GO:0051168,GO:0051169,GO:0051179,GO:0051234,GO:0051236,GO:0051641,GO:0051649,GO:0070013,GO:0070727,GO:0071166,GO:0071426,GO:0071431,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0089701,GO:0090304,GO:0097064,GO:0097159,GO:1901360,GO:1901363,GO:1990904
EggNOG free text desc.tRNA export from nucleus
EggNOG OGsKOG2054@1,KOG2054@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03009
Exons6
Model size837
Cds size837
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig13533.5985.1prot_M-pyrifera_M_contig13533.5985.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig13533 1241..7751 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815819.2627628-CDS-M-pyrifera_M_contig13533:1240..13881622815819.2627628-CDS-M-pyrifera_M_contig13533:1240..1388Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13533 1241..1388 +
1692277587.0455313-CDS-M-pyrifera_M_contig13533:1240..13881692277587.0455313-CDS-M-pyrifera_M_contig13533:1240..1388Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13533 1241..1388 +
1622815819.27433-CDS-M-pyrifera_M_contig13533:3272..35071622815819.27433-CDS-M-pyrifera_M_contig13533:3272..3507Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13533 3273..3507 +
1692277587.0658822-CDS-M-pyrifera_M_contig13533:3272..35071692277587.0658822-CDS-M-pyrifera_M_contig13533:3272..3507Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13533 3273..3507 +
1622815819.2840695-CDS-M-pyrifera_M_contig13533:4654..47211622815819.2840695-CDS-M-pyrifera_M_contig13533:4654..4721Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13533 4655..4721 +
1692277587.0791712-CDS-M-pyrifera_M_contig13533:4654..47211692277587.0791712-CDS-M-pyrifera_M_contig13533:4654..4721Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13533 4655..4721 +
1622815819.2953415-CDS-M-pyrifera_M_contig13533:5045..51801622815819.2953415-CDS-M-pyrifera_M_contig13533:5045..5180Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13533 5046..5180 +
1692277587.0888226-CDS-M-pyrifera_M_contig13533:5045..51801692277587.0888226-CDS-M-pyrifera_M_contig13533:5045..5180Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13533 5046..5180 +
1622815819.3111222-CDS-M-pyrifera_M_contig13533:6486..65841622815819.3111222-CDS-M-pyrifera_M_contig13533:6486..6584Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13533 6487..6584 +
1692277587.0975375-CDS-M-pyrifera_M_contig13533:6486..65841692277587.0975375-CDS-M-pyrifera_M_contig13533:6486..6584Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13533 6487..6584 +
1622815819.331272-CDS-M-pyrifera_M_contig13533:7597..77511622815819.331272-CDS-M-pyrifera_M_contig13533:7597..7751Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13533 7598..7751 +
1692277587.1048627-CDS-M-pyrifera_M_contig13533:7597..77511692277587.1048627-CDS-M-pyrifera_M_contig13533:7597..7751Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13533 7598..7751 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig13533.5985.1

>prot_M-pyrifera_M_contig13533.5985.1 ID=prot_M-pyrifera_M_contig13533.5985.1|Name=mRNA_M-pyrifera_M_contig13533.5985.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=279bp
EEEEGLLDRPLWSYVSDRITRLLTEGLGDRCVLARPLCGAAGEDGEDFRG
IPGPRGWNPRSPPPPDGCFSFGGDEGEGTHMKHPLLTVGLIVDSVNAGRL
VDKGPPAEDGPAARKFREFWGDKSELRRFKDGSIVEAVVWKGKGAQRHRV
VARHVLARHDPSRCAESSKRSKQNQNAVRFRGNELLGMVAVGGLEEGAAE
DDDLTRSALKALEKLMEKAKAVEGMPLRVESLQASSPLLRYTSLLPPVPH
PLATSPGEAAVVFPSQSTRITSQVQDDA*
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mRNA from alignment at M-pyrifera_M_contig13533:1241..7751+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig13533.5985.1 ID=mRNA_M-pyrifera_M_contig13533.5985.1|Name=mRNA_M-pyrifera_M_contig13533.5985.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=6511bp|location=Sequence derived from alignment at M-pyrifera_M_contig13533:1241..7751+ (Macrocystis pyrifera P11B4 male)
GAGGAGGAAGAGGGACTGCTGGATAGACCCCTTTGGAGCTATGTTTCCGA CCGAATAACGAGGCTTTTAACGGAGGGGTTGGGGGACCGTTGCGTGCTGG CGAGGCCGTTGTGCGGCGCCGCGGGAGAGGACGGGGAAGACTTCCGGGGT GAGGAAGAGGAGGCGTTATTTTGTAACCAATAGCTTGATTAGGAACTGTA ACCGACGGCGTAAAATTGTAACCGACGATGAACGTTGTGGCCCACAGCGT GATTTATGGCCGGCAGTATGTTTTGAAACGTTCAGCGTGATTTTTTTTAT CCAACGACGTGGCTTGTAACTGTAGCCGACCGCGTGATGTGTAACCGACG ACGCGATGTATAGGCGGCAACAAAATATGTAACCGATGGCGTGATAGGTA GCCGACGGCGTGATATGTAACCGACGGCGTGATATGTGACCGAGAGCGTA ATATGTAACTGACGGCGTCATTTGTAACCGACGACGCGATGTATAGGCGG CAACATGATTTGTAACCGATGGCGTGATAGATAGCCGACGGCGTGATATG TAAGGGCCCATCTTAACGGGGAACCCTAAATTTCGTTTAATCAGATGATG CAAATTAAATTAGAAAAAAAAAATCAATTCAAATTGAAAGAACCGAAAGT CCTCGATCAGATGAGCCCTAGAATTAAATTGGAAAAAAAAAAATCAAGTC GAATTGAAAGAGCCGAAAGTCTCCGTTAAGATGGGCCCTAACCGACGGCG TGATATGTAACCGATGGCGTGATAGTTAACCGACGGCGTGATTTGTAACC GACAGCGTGATTTGTAACCGACGGCGATGATTTGCAACCGACGGCGTGAT GTGCGTCGTCAGCGGCTGGCCTTGAGTACGTACCCACATCACACTAAGAG ATGACGTGACCCTCACAGAAGGAGATAGCTTACTGCGGGACTATGCACCG TCCCACACAATGCGCTAATACCCAAATGGTTAGTGTAGTGTTACGAGCGG ACGCTTGCTACGATACAGGTTTAGCTTTTTTTTTGCCAAACTATTTCTGA CTGACTGATAATAGGCTTCTTAAGGGCTCTGAGGATTTCACCCTCTTTTT TTTCCTGTGTTTTTCACTATTTTTCGATGTATGTATGTGTACCTGTTAGT TCATCGGGTTGTACGTTCGTTTTTCTGAGAGTTTTTTTTTTGGGGGGGGG GGGTGAGGTAACCAACAAACTGATTTTAGAGAAAAGCTAAAAAGCGCAAC CCGGATGCGCAATCCCAACTATTACGGGGGGGCATATTGAATAGGACCTA CGGTACGCACAAAAAATTATATATTTACCTATTTTTTACAAACAATATTT GGTCCAATTTGATTTATTTACTGTGGTCCCCCGTAATGGTAGGTACCAGA TAGTGATGATGACTGTTGTAGAAGCGCTAATGATATCCCAACGATGTTGG GTTAAGATCCCTTTTGGTATATACTGCAGTCTCTTTTTGGGGGCAAAGCA CTGAACTGCTACCTTGTAAGCAGTCTGTCCTCCAAACGGGACTGCAGCCC TACACTAAAACGGCTATACCTCTTTTTGGGACCCCTCGATGATGGTGATC AACACGATGGTTGGTAACCTTGGTGTTACATATATCAACCATCTGCGAGC ACCCGTGTGTGCCCAGCAACACGGGCGGTATCATCTTGCCCCCCGTTGCC CTGCTGCGACTTGACTCCCTTGCATTGTAACTTTCGGACACCAATTTTGT ACCATCCCTCAAAATGACGCAGTGGGCGTCTTCTCTAAAGTCGTCTTTTT TTCATTTATCGCTTTTTCCCTCTGAGGTAAAACTCCCTGCAGGACTAACT AAGTGAGGACCCCCAGCAAATCGCAGGTTCACACCTATCGTAGAATGCAT CAGCAGTCATTTACATTTCGAAGCTGGCCCAAGGTCGTATGTCATGTACG GCCCCCTTTTCGCTACGAAACCCACCAACCTGCTAGCCGATTGGATCCTT GCCGTTTCATTTTCGTTTCTTGTTGCCGACAGGCATTCCGGGCCCCCGGG GCTGGAACCCACGGTCCCCTCCCCCCCCCGACGGCTGTTTTTCCTTCGGA GGCGATGAAGGGGAGGGGACCCACATGAAACATCCCCTGTTAACGGTTGG CCTCATCGTAGACTCGGTAAATGCGGGGAGATTGGTGGACAAGGGACCCC CGGCCGAGGATGGTCCCGCCGCGAGAAAATTCCGAGAATTTTGGGGAGAT AAGAGCGAGCTGCGGAGGTGGGTCTTTCCGTGTTCAGTGTATGGTTTCAC TCAATATGACAGATCATCTACAGATCATCTAGATCCTAACCTGCCGTTGT GATGTGCTGTGCAGTATCTGTTTACAGTAGTACAGATCCAACCCAGGAAC TATACGCTACTTGCAATAAATCATGCAGATTGTACGGCACCCACCTCGGA ACATGAGCTAGATCATACAGATCATACAGATGACACAGATCATACAGATC AGGAATATATCTGCCCTGAAAGATCTATATCACGAACTTACTGTCAGGAA TATTATATATGTATATATATATGAGCTATCTGATCTGTCCGATGTGTTCA TACCTTTTTTTTACGAGCGAAGGTGCGACTTTCTACTTCACACCGAGCAC AAAAATAGCAGGGCTCTTTACGGGTCGTGACTCCGATCAGGAACTTTTTT TTTAAATCTAACCGGATCGGGTCGGATCGGGTCGGGTCGGGTCGGACTGG GTAGGGTCAGGAGGCTTTCAAGACCCTCACGGATCGGATCGACGGGTCAC CCTTGATCCTTTTAGCGATGCAGTCCTGTCTTGGGGATAAACCACTCTAA TTTCAAGTAGTTTTTCCCCAAAACGGGACTGCAGTACTAAATGAGTTAAC CGACGGGTCACCCTTAACCGGCCCGACCCGACCCGACCCGACCCGCGAGG TTGGACCCGATCCGTGAACAGCCCTCTCGGGATGGCTGAAGCGACCGACC GACCGACCGGGATCCACCAACGCACACAAGTTGGCGACAGTTACAACTAT CCTGCTGCCCGAATTACTAGCGACAGCTTACACTATTGTAGGTTCTTACT AGTCTATGTTTCTTGTATTGTCTCAACTCTGTGTTGTTGCAAAGGCCCAC CTGTATGGGTGCGATGAGTACTGTGCCTCGTCGCCTTTCGTTGCCTACCC TCTGAGGTGGAAGCGTGGTCATCGAGTGTCATGTTGTGTCAATGTTTCAG TTTCCACCTCCAACACACCGATGCTTATTTCTACGTGTCATGTTTTGTCT GTATTGTCTGTCTATCCGCCTGTCTGCGTTCTGTCCGTCCGTCCGTCCGT CTGTCCGTTTGTCTGTCTGCCCGCCTGCCTGCTTGTTGTTACCCTTCCTT CGTCTGCCACGCAGGTTTAAAGACGGGAGCATTGTGGAGGCGGTAGTGTG GAAGGGGAAAGGGGCACAAAGGCACCGCGTCGTCGAGCAGGCGAGTTCGT TTTTCATGTTTACTTTTTGGTACAGGATGTGTTTCCGGTTTTTCCGTTTT CTGTATTCTAGTTTTTGCTGTTGCTGCTAAGTTTCAATACATGTTTTTTT CTACCTGGTATGTTCTATTTTCTATTTCCCAAGTTTCATTCTTCAGCTTC ACTTCTGAGTTTTCGTCTTTCGATGTTCTTTTACTGGTTTTCGACCTTCA ACTTTCGATTTTTCAATTTCCGCTTTTCAATTTTCGATTACGTAATGATT TTGGATTTTTCACTTTCCATTGTTTTGACTCCCGGCCATGTCTTTGTTTG AACAGGTGGCGCGACACGTGCTAGCGCGACATGACCCTTCGAGATGCGCG GAGAGTTCGAAGCGGTCCAAGCAGAACCAAAACGCCGTTCGGTTCCGAGG AAACGAGCTTTTGGGGATGGTGGCGGTCGGCGGGTTAGAGGTGCGGCGTA ACTATGATTGCCGATTGGTCGGGTTGTCGGCGGCACTGGATAAAATACCG TTGAGCGTGATTGATTTAGCCGTTATTTGGTGGTAGGGGGAGTAGAGGTG CGGCGGCGAATCCATGGCGGTTGTCGGTTGGTTGGTTGTTGATGGCACTG GATAGTTGGATAAAGGGCGATATTGTAGCTACCGTTATCTGTAGTTAACT ACAGTAGCTGTTGTTGTTTTTTATCGTTCTGGTGACGGGTGGCGCTGTCC GGCCAAAGTCAATTCGCGGTCGTTTTGTGACACTCGATAAAGTACCGTTG GGTTGAACTATCCCCCCGTTAGCTTTCGGGCGCAGTTAGGTAGTCAGTTA GCTAGCTATTAATAGCTGTTGTTTTTTTACTTTCTGGTGACGAGTGGTGC CGTTCAGCCGAAACCATTTCGCGGCCGTTTTGTGACACTCGATGAAGTAC CGTTGAGTTGGATTTATCTCGATCTAACCGTTAGTTTTTGGGGATGGTAG CGGTCGCCGAATTTGAGGTGAGGCGTAACTATGATTATCGGCTTGTCGAT TGTCGATGGCACTGGATAAATTACCGTTGGGTTCGACATATTTACCTGTT GTGGACGAAAGGTGCAGCGTAACTATGGTTGTAGGTTGGCTGTCGTTGAA TAGCCGTTGGGCTAGTTAGTTAGCTAGCCGTTAGTTTTTTTACTTGCTGT TGACTGATTGTGCGTCCAAAGCCCAATACGCGGCGGTTTTGTGGCACTGG TTATAGTACCGTTGGGTTTGAGCGAGCTATCGGTTGGCGTTTATATATTC CGGTGACCCCGCACAAGTCTATCGCGCAGCCGTTGATTTTGAGCTATCTA GCCGTTAGTTTTTGGGGGTGGTGACGGTCGGGGGATTAGAGGTGCGGTAT AACTGTGGTTGTCGTTTTGTCGGGAAGTGGCATTGGATAAAGTACCGTTG GGTTTCGAGCCAGGTTGCTCGCCGTTGACTTTGATTACTTTCTGGTGACT CGTGGTGGTATGACCAATGTCCGTTTCGCGACCGTTTTTTCGGGACTCGG TAAGGTACTGTCGGGTTTGAGCGGGATAGCGAGATAGCCGCGGACTTCAT TGCTTGCTGGTGACTATGGCGGCGGTAGTATGGCGGCGGCCGGCAGATTC GAGGTGCAGCTTGTTGTTGATGTGCTTTGCGTGTTGATGTTTTTTGTTGC GCGTTTCTCGTGATGGTGTGAACTTTGTGTTGTTGCTGTTGTTGATGGTG TGGTGTTTTGTGTTCATGCTGTCGTCTATTTGCGTTTTGTGGACAGGAGG GCGCGGCGGAGGACGACGACTTGACGAGGTCGGCCCTGAAGGCGCTCGAA AAGCTCATGGAGAAGGCCAAGGCGGTCGAGGGCATGCCACTCAGGTGCTG GGTTGCGGTTGCTGCTGCTGTTGGATCGCTGTCGGATTGGGTTGGCAGTA GATAGGTTTGGATTGGCGTTGATACTAATCAGGCCGCATTGGGTTGGGGT TGGTCGTCATTTTTCTGTCCGGTATAAACTGCAGTACCTAGACAAGTACC TAGATACTGGTGGTACCTCACAGATAGGCAGTCCCACAGCTGGGACGGAT AGATCATGATCTATCTATCTTTCTATCTATATATCTACCTATATGTCTAT ATATCTATCTATATATGTATTCATCTATCTACAGTAGATGATCTAGTTCC TCACCTACTTGCCGTTGTGAGAGTTTGTGCAAGATCTGCCTTACAGGGCA GATAGATCACACCCAGAAAACATGTACCAGTATATCAGATCATGCAGAAT GGACGGCTCCCACCAGTCAGCACGAGCTACGAGTGAGCTACGACTGTAGA TTAATCCTCTTGACCAATGAGGGAAAGAAGGACATCTGCCCCGAAAGCGT AGGTTATCCAGAAGTGGGAATCGATAATTTTTGTCCGAGGTGTGGGCGGC ATTGTAAGGGCACTGTAGAGACCGTTTAGATGTTAATAGGGGGACCAAGC TGTTCTTATGTTTGGGGCGAAACGTAGCCCACGCCCGTTCCTGTACGCGC ACTTAGTTCGTATTTCTGTTTCTGTTTATGTTTCGACTTTTGTTCTTACG CCTGTTGCTGATTGTCGTTCTTGTCTGTCCCTCTTATTAGTGGTATTCAC GTTTTTGTTGCTCTTCCTGTAATTTTTTTCCTTTTTTCTTTCTTCTTTTT TACGTTTTTTTTTTGTTTCCCCTCTCTGCCTTGCGGTTTCCCCTTCTCGT TTATGTGCTCCCTTCTCATATTGTTTTAGCAGTAGTATTGTTCTTGACCT GCTTTCTTCTTGCCGTTCCTCTTCTTGTTTCTGTTGTGTTTCATGTTCCT CTTGCTCGGCGTACTCCTCGCCTCGTTCTTGTTCCTCTCCTCGTTCTTAT CGGGCAGGGTGGAGTCGCTGCAGGCATCGTCGCCCTTGCTGAGATACACC TCGCTTCTACCCCCGGTCCCGCATCCTTTAGCCACGAGTCCCGGAGAGGC AGCAGTCGTGTTCCCTTCACAATCCACCAGGATCACATCTCAGGTACAGG ACGATGCGTAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig13533:1241..7751+

>mRNA_M-pyrifera_M_contig13533.5985.1 ID=mRNA_M-pyrifera_M_contig13533.5985.1|Name=mRNA_M-pyrifera_M_contig13533.5985.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1674bp|location=Sequence derived from alignment at M-pyrifera_M_contig13533:1241..7751+ (Macrocystis pyrifera P11B4 male)
GAGGAGGAAGAGGGACTGCTGGATAGACCCCTTTGGAGCTATGTTTCCGA
CCGAATAACGAGGCTTTTAACGGAGGGGTTGGGGGACCGTTGCGTGCTGG
CGAGGCCGTTGTGCGGCGCCGCGGGAGAGGACGGGGAAGACTTCCGGGGA
GGAGGAAGAGGGACTGCTGGATAGACCCCTTTGGAGCTATGTTTCCGACC
GAATAACGAGGCTTTTAACGGAGGGGTTGGGGGACCGTTGCGTGCTGGCG
AGGCCGTTGTGCGGCGCCGCGGGAGAGGACGGGGAAGACTTCCGGGGCAT
TCCGGGCCCCCGGGGCTGGAACCCACGGTCCCCTCCCCCCCCCGACGGCT
GTTTTTCCTTCGGAGGCGATGAAGGGGAGGGGACCCACATGAAACATCCC
CTGTTAACGGTTGGCCTCATCGTAGACTCGGTAAATGCGGGGAGATTGGT
GGACAAGGGACCCCCGGCCGAGGATGGTCCCGCCGCGAGAAAATTCCGAG
AATTTTGGGGAGATAAGAGCGAGCTGCGGAGGCATTCCGGGCCCCCGGGG
CTGGAACCCACGGTCCCCTCCCCCCCCCGACGGCTGTTTTTCCTTCGGAG
GCGATGAAGGGGAGGGGACCCACATGAAACATCCCCTGTTAACGGTTGGC
CTCATCGTAGACTCGGTAAATGCGGGGAGATTGGTGGACAAGGGACCCCC
GGCCGAGGATGGTCCCGCCGCGAGAAAATTCCGAGAATTTTGGGGAGATA
AGAGCGAGCTGCGGAGGTTTAAAGACGGGAGCATTGTGGAGGCGGTAGTG
TGGAAGGGGAAAGGGGCACAAAGGCACCGCGTCGTTTAAAGACGGGAGCA
TTGTGGAGGCGGTAGTGTGGAAGGGGAAAGGGGCACAAAGGCACCGCGTC
GTGGCGCGACACGTGCTAGCGCGACATGACCCTTCGAGATGCGCGGAGAG
TTCGAAGCGGTCCAAGCAGAACCAAAACGCCGTTCGGTTCCGAGGAAACG
AGCTTTTGGGGATGGTGGCGGTCGGCGGGTTAGAGGTGGCGCGACACGTG
CTAGCGCGACATGACCCTTCGAGATGCGCGGAGAGTTCGAAGCGGTCCAA
GCAGAACCAAAACGCCGTTCGGTTCCGAGGAAACGAGCTTTTGGGGATGG
TGGCGGTCGGCGGGTTAGAGGAGGGCGCGGCGGAGGACGACGACTTGACG
AGGTCGGCCCTGAAGGCGCTCGAAAAGCTCATGGAGAAGGCCAAGGCGGT
CGAGGGCATGCCACTCAGGAGGGCGCGGCGGAGGACGACGACTTGACGAG
GTCGGCCCTGAAGGCGCTCGAAAAGCTCATGGAGAAGGCCAAGGCGGTCG
AGGGCATGCCACTCAGGGTGGAGTCGCTGCAGGCATCGTCGCCCTTGCTG
AGATACACCTCGCTTCTACCCCCGGTCCCGCATCCTTTAGCCACGAGTCC
CGGAGAGGCAGCAGTCGTGTTCCCTTCACAATCCACCAGGATCACATCTC
AGGTACAGGACGATGCGTAAGGTGGAGTCGCTGCAGGCATCGTCGCCCTT
GCTGAGATACACCTCGCTTCTACCCCCGGTCCCGCATCCTTTAGCCACGA
GTCCCGGAGAGGCAGCAGTCGTGTTCCCTTCACAATCCACCAGGATCACA
TCTCAGGTACAGGACGATGCGTAA
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