mRNA_M-pyrifera_M_contig13468.5968.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig13468.5968.1 vs. uniprot
Match: D7G2R6_ECTSI (Derlin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2R6_ECTSI) HSP 1 Score: 235 bits (599), Expect = 5.260e-71 Identity = 109/128 (85.16%), Postives = 123/128 (96.09%), Query Frame = 1
Query: 1 LRSLLLLTLATGGDINSSYTLGHSLSCFLVMVWSRKFAGTKVNVLDMFELPTELLPYFFVAQTLMMEGIVPWVDLSGLLIGYAWQTLSLKGLLKAPKPLADLFRTNAFLRAEYARAGKEYGQDIPFND 384
+ SLLLLTL TGGD+NSSYTLGHS++CFLVM+WSRKFAGT+VN+LDMFELPTELLPYFFVAQTLMMEG++PWVDLSG+LIGYAWQTLSLKGLLKAPKPL +LFR NAFLRAEYA+AGKEYGQD+P +D
Sbjct: 224 MSSLLLLTLVTGGDVNSSYTLGHSMNCFLVMIWSRKFAGTRVNMLDMFELPTELLPYFFVAQTLMMEGVIPWVDLSGILIGYAWQTLSLKGLLKAPKPLVNLFRNNAFLRAEYAKAGKEYGQDVPLHD 351
BLAST of mRNA_M-pyrifera_M_contig13468.5968.1 vs. uniprot
Match: F0YAW8_AURAN (Derlin n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YAW8_AURAN) HSP 1 Score: 100 bits (248), Expect = 4.390e-21 Identity = 51/117 (43.59%), Postives = 75/117 (64.10%), Query Frame = 1
Query: 13 LLLTLATGGDINSSYTLGHSLSCFLVMVWSRKFAGTKVNVLDMFELPTELLPYFFVAQTLMMEGIVPWVDLSGLLIGYAWQTLSLKGLLKAPKPLADLFRTNAFLRAEYARAGKEYG 363
LLL + GG ++ LGH+LSCFLV +W+R + G +V+V++ F + ELLP+FF AQT ++E +P DL G+ IG+ + + +L APKPL DLF +N L A Y +E+G
Sbjct: 205 LLLGVGLGGM--KTHFLGHNLSCFLVYIWARTYEGQEVSVMEFFNIKAELLPWFFAAQTYLLEHELPIHDLLGIAIGHLYTVARQRKILGAPKPLQDLFTSNPALMARYEAMAEEFG 319
BLAST of mRNA_M-pyrifera_M_contig13468.5968.1 vs. uniprot
Match: A0A7S2Y3M2_9STRA (Derlin n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y3M2_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 7.480e-20 Identity = 46/105 (43.81%), Postives = 71/105 (67.62%), Query Frame = 1
Query: 49 SSYTLGHSLSCFLVMVWSRKFAGTKVNVLDMFELPTELLPYFFVAQTLMMEGIVPWVDLSGLLIGYAWQTLSLKGLLKAPKPLADLFRTNAFLRAEYARAGKEYG 363
S LGH+LSCFLV +W++K+ G VNV+D+F + ELLP+FFVAQTL++ G +P D+ G+ G+ + L+LK + AP+ L +F ++ ++ Y R +EYG
Sbjct: 231 SPNVLGHNLSCFLVYIWAKKYEGNDVNVMDLFHMSAELLPWFFVAQTLVLTGELPIADIIGIAAGHMYHYLNLKKMTSAPEFLQRIFEIDS-IKMRYERYEEEYG 334
BLAST of mRNA_M-pyrifera_M_contig13468.5968.1 vs. uniprot
Match: A0A0G4GDN6_VITBC (Derlin n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GDN6_VITBC) HSP 1 Score: 92.0 bits (227), Expect = 5.410e-18 Identity = 46/100 (46.00%), Postives = 64/100 (64.00%), Query Frame = 1
Query: 61 LGHSLSCFLVMVWSRKFAGTKVNVLDMFELPTELLPYFFVAQTLMMEGIVPWVDLSGLLIGYAWQTLSLKGLLKAPKPLADLFRTNAFLRAEYARAGKEY 360
LGH+LS F+V VWSR G VN++D+F+L E LP+FFV QT ++EG P DL G+ G+ + L + LK+P PL DLFR L+ +Y + KE+
Sbjct: 243 LGHNLSSFIVYVWSRTHEGQDVNIMDLFQLRAEYLPWFFVMQTWLLEGQAPTFDLLGIAFGWLYHWLKSRHWLKSPPPLKDLFR-QPVLKRQYEKYEKEF 341
BLAST of mRNA_M-pyrifera_M_contig13468.5968.1 vs. uniprot
Match: A0A6V1KE03_HETAK (Derlin n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1KE03_HETAK) HSP 1 Score: 88.2 bits (217), Expect = 1.240e-16 Identity = 43/101 (42.57%), Postives = 67/101 (66.34%), Query Frame = 1
Query: 61 LGHSLSCFLVMVWSRKFAGTKVNVLDMFELPTELLPYFFVAQTLMMEGIVPWVDLSGLLIGYAWQTLSLKGLLKAPKPLADLFRTNAFLRAEYARAGKEYG 363
LGH+L+CFLV VWSR G V + D FE+ L+P+FF Q ++MEG++P+ D+ G+LIG+A+ L K LL AP + +F+ + L+++Y +E+G
Sbjct: 227 LGHNLACFLVYVWSRVHEGQSVLLFDFFEMKAVLMPWFFALQPMIMEGMIPYPDILGILIGHAYYYLKTKKLLVAPAFIKSIFQ-HPILKSKYLVFEEEFG 326
BLAST of mRNA_M-pyrifera_M_contig13468.5968.1 vs. uniprot
Match: A0A836CBA0_9STRA (Derlin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBA0_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 3.290e-15 Identity = 41/88 (46.59%), Postives = 61/88 (69.32%), Query Frame = 1
Query: 100 SRKFAGTKVNVLDMFELPTELLPYFFVAQTLMMEGIVPWVDLSGLLIGYAWQTLSLKGLLKAPKPLADLFRTNAFLRAEYARAGKEYG 363
SR++ G +VNV DMF L ELLP+FFVAQTL++EG VP +DL G+ +GY + L ++ L+KAP+ + F+ A + +Y R +E+G
Sbjct: 167 SREYEGVEVNVNDMFSLKAELLPWFFVAQTLVLEGEVPLLDLLGIFVGYLYMQLKIRKLIKAPEFVTQFFKLPAIAK-DYKRFEREFG 253
BLAST of mRNA_M-pyrifera_M_contig13468.5968.1 vs. uniprot
Match: A0A7S2XRP1_9STRA (Derlin n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XRP1_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 1.700e-14 Identity = 37/104 (35.58%), Postives = 62/104 (59.62%), Query Frame = 1
Query: 61 LGHSLSCFLVMVWSRKFAGTKVNVLDMFELPTELLPYFFVAQTLMMEGIVPWVDLSGLLIGYAWQTLSLKGLLKAPKPLADLF----RTNAFLRAEYARAGKEY 360
LGH+LS FLV +WSR G +VN+ ++F E+LP+FF+AQT ++EG P +DL G++ G+ + +L+ P+ + D + R + LR +Y ++
Sbjct: 16 LGHNLSTFLVYIWSRYHEGLEVNMFELFNTRAEMLPWFFLAQTFLLEGEFPVLDLLGIVFGHIYHHCKTTNILRTPQFIIDWYNSDGRFSTVLRKQYKAISSDF 119
BLAST of mRNA_M-pyrifera_M_contig13468.5968.1 vs. uniprot
Match: W7TX70_9STRA (Derlin n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TX70_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 2.560e-14 Identity = 40/88 (45.45%), Postives = 57/88 (64.77%), Query Frame = 1
Query: 61 LGHSLSCFLVMVWSRKFAGTKVNVLDMFELPTELLPYFFVAQTLMMEGIVPWVDLSGLLIGYAWQTLSLKGLLKAPKPLADLFRTNAF 324
LGH+LSC+LV VWSR F G V+V+ +F LP +LP+FFVAQT+++E +P DL G+ +G+ + S + L+K P L F F
Sbjct: 326 LGHNLSCYLVYVWSRMFEGQDVDVMGLFHLPAHVLPWFFVAQTVVLEQELPLSDLLGIAVGHLYHYASTRKLVKPPAFLRVFFAQKHF 413
BLAST of mRNA_M-pyrifera_M_contig13468.5968.1 vs. uniprot
Match: A0A7S0C2M9_9STRA (Derlin n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C2M9_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 1.430e-13 Identity = 38/104 (36.54%), Postives = 60/104 (57.69%), Query Frame = 1
Query: 61 LGHSLSCFLVMVWSRKFAGTKVNVLDMFELPTELLPYFFVAQTLMMEGIVPWVDLSGLLIGYAWQTLSLKGLLKAPKPLADLFRTNAFLRAEYARAGKEYGQDI 372
LGH+LS FLV VWSR G +VN++++F E+LP+FF+AQT ++EG +P +DL G+L G+ + +LK P+ + + + + KE D
Sbjct: 79 LGHNLSTFLVYVWSRYHEGMEVNLMELFNARAEMLPWFFLAQTALLEGELPILDLLGILFGHIYHHCKTTQVLKTPQFIVNWYNGSGPYSTAIRNKYKEISSDF 182
BLAST of mRNA_M-pyrifera_M_contig13468.5968.1 vs. uniprot
Match: A0A0P0YV70_9STRA (Derlin n=1 Tax=Nitzschia sp. IriIs04 TaxID=1444690 RepID=A0A0P0YV70_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 1.970e-13 Identity = 40/103 (38.83%), Postives = 63/103 (61.17%), Query Frame = 1
Query: 61 LGHSLSCFLVMVWSRKFAGTKVNVLDMFELPTELLPYFFVAQTLMMEGIVPWVDLSGLLIGYAWQTLSLKGLLKAPKPLADLFRTNAF---LRAEYARAGKEY 360
LGH+LS +LV VWSR G V++ ++F ELLP+FFVAQT ++EG P +D+ G++ G+ + GLL+AP L D + T+ +R +Y + ++
Sbjct: 246 LGHNLSTYLVYVWSRHHEGMDVDMFELFTARAELLPWFFVAQTYLLEGAPPIMDILGIVFGHVYFHCKSTGLLRAPDALVDWYVTSESAKPIRQQYKQISSDF 348 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig13468.5968.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig13468.5968.1 >prot_M-pyrifera_M_contig13468.5968.1 ID=prot_M-pyrifera_M_contig13468.5968.1|Name=mRNA_M-pyrifera_M_contig13468.5968.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=263bp LRSLLLLTLATGGDINSSYTLGHSLSCFLVMVWSRKFAGTKVNVLDMFELback to top mRNA from alignment at M-pyrifera_M_contig13468:6785..8573- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig13468.5968.1 ID=mRNA_M-pyrifera_M_contig13468.5968.1|Name=mRNA_M-pyrifera_M_contig13468.5968.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1789bp|location=Sequence derived from alignment at M-pyrifera_M_contig13468:6785..8573- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig13468:6785..8573- >mRNA_M-pyrifera_M_contig13468.5968.1 ID=mRNA_M-pyrifera_M_contig13468.5968.1|Name=mRNA_M-pyrifera_M_contig13468.5968.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1578bp|location=Sequence derived from alignment at M-pyrifera_M_contig13468:6785..8573- (Macrocystis pyrifera P11B4 male)back to top |