mRNA_M-pyrifera_M_contig13463.5967.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig13463.5967.1 vs. uniprot
Match: A0A6H5KJU0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJU0_9PHAE) HSP 1 Score: 149 bits (376), Expect = 1.250e-44 Identity = 76/84 (90.48%), Postives = 77/84 (91.67%), Query Frame = 1
Query: 10 AVPNRYLRLVDKFNEQNVSAFLTAGGAKLMLLHDGSTDDAIRTFFTEVHELY--LLMNPFYAYDSPVISPAFDQRVKALARKLL 255
+ P YLRLVDKFNEQNVSAFLTAGGAKLMLLHDG TDDAIRTFF EVHELY LLMNPFYAYDSPVISPAFDQRVKALARKLL
Sbjct: 57 STPATYLRLVDKFNEQNVSAFLTAGGAKLMLLHDGRTDDAIRTFFAEVHELYVKLLMNPFYAYDSPVISPAFDQRVKALARKLL 140
BLAST of mRNA_M-pyrifera_M_contig13463.5967.1 vs. uniprot
Match: A0A835Z2S7_9STRA (Sedlin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2S7_9STRA) HSP 1 Score: 107 bits (266), Expect = 6.440e-28 Identity = 50/79 (63.29%), Postives = 66/79 (83.54%), Query Frame = 1
Query: 25 YLRLVDKFNEQNVSAFLTAGGAKLMLLHDGSTDDAIRTFFTEVHELYL--LMNPFYAYDSPVISPAFDQRVKALARKLL 255
YLR+VDKFNEQ VSA+LTA G +LMLLHDG +++ I +FF +VHELY+ ++NPFY +D+P+ISP FD+RV+ALA K L
Sbjct: 61 YLRVVDKFNEQIVSAYLTAAGVRLMLLHDGRSEEGIGSFFKDVHELYVKHMLNPFYRFDTPIISPEFDERVRALAVKWL 139
BLAST of mRNA_M-pyrifera_M_contig13463.5967.1 vs. uniprot
Match: A0A7S0FIJ0_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FIJ0_9STRA) HSP 1 Score: 105 bits (261), Expect = 3.300e-27 Identity = 49/81 (60.49%), Postives = 63/81 (77.78%), Query Frame = 1
Query: 19 NRYLRLVDKFNEQNVSAFLTAGGAKLMLLHDGSTDDAIRTFFTEVHELY--LLMNPFYAYDSPVISPAFDQRVKALARKLL 255
N YL++VDK N Q VS FLTAG K MLLH G +D+I+ FF++V+ELY LL+NPFYAYD+P+ S AFD RV+A+AR+ L
Sbjct: 54 NMYLKVVDKVNHQQVSTFLTAGNVKFMLLHGGKNEDSIKNFFSDVYELYVKLLLNPFYAYDTPITSKAFDTRVRAIARRYL 134
BLAST of mRNA_M-pyrifera_M_contig13463.5967.1 vs. uniprot
Match: A0A7S2US08_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2US08_9STRA) HSP 1 Score: 104 bits (260), Expect = 4.950e-27 Identity = 47/79 (59.49%), Postives = 64/79 (81.01%), Query Frame = 1
Query: 19 NRYLRLVDKFNEQNVSAFLTAGGAKLMLLHDGSTDDAIRTFFTEVHELY--LLMNPFYAYDSPVISPAFDQRVKALARK 249
N YL+ +DKFN+ ++S ++TA G + +LLHDG +DDAI+ FF++V+ELY LLMNPFY YDS V+SPAFD RV+ LAR+
Sbjct: 57 NMYLKTIDKFNDMSISGWITAQGIRFLLLHDGRSDDAIKNFFSDVYELYVRLLMNPFYKYDSQVLSPAFDHRVRILARR 135
BLAST of mRNA_M-pyrifera_M_contig13463.5967.1 vs. uniprot
Match: A0A0L0SS10_ALLM3 (Uncharacterized protein n=2 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0SS10_ALLM3) HSP 1 Score: 101 bits (252), Expect = 7.050e-26 Identity = 47/82 (57.32%), Postives = 62/82 (75.61%), Query Frame = 1
Query: 16 PNRYLRLVDKFNEQNVSAFLTAGGAKLMLLHDGSTDDAIRTFFTEVHELYL--LMNPFYAYDSPVISPAFDQRVKALARKLL 255
PN YLR+VDKFN+ VSAF++AG + MLLHD +D IR FFT+VHELY+ LMNPFY + P+ +PAFD +V+ +AR+ L
Sbjct: 51 PNMYLRVVDKFNDWFVSAFVSAGNIRFMLLHDSKNEDGIRNFFTDVHELYVKSLMNPFYEVNDPIDNPAFDLKVRTIARRYL 132
BLAST of mRNA_M-pyrifera_M_contig13463.5967.1 vs. uniprot
Match: H3G6S7_PHYRM (Uncharacterized protein n=25 Tax=Peronosporaceae TaxID=4777 RepID=H3G6S7_PHYRM) HSP 1 Score: 100 bits (248), Expect = 2.780e-25 Identity = 48/82 (58.54%), Postives = 60/82 (73.17%), Query Frame = 1
Query: 16 PNRYLRLVDKFNEQNVSAFLTAGGAKLMLLHDGSTDDAIRTFFTEVHELY--LLMNPFYAYDSPVISPAFDQRVKALARKLL 255
P L++VD+FN+Q VSAF+TA G K +LLH+ DD ++ FF EVHELY LLMNPFY YD+P+ S FD RVK LAR+ L
Sbjct: 50 PAMALKVVDRFNDQLVSAFVTASGVKFLLLHETRNDDTVKAFFHEVHELYVKLLMNPFYEYDTPISSEVFDARVKTLARRYL 131
BLAST of mRNA_M-pyrifera_M_contig13463.5967.1 vs. uniprot
Match: A0A7S2EF91_TRICV (Hypothetical protein n=2 Tax=Eupodiscales TaxID=33838 RepID=A0A7S2EF91_TRICV) HSP 1 Score: 100 bits (248), Expect = 3.460e-25 Identity = 47/81 (58.02%), Postives = 60/81 (74.07%), Query Frame = 1
Query: 19 NRYLRLVDKFNEQNVSAFLTAGGAKLMLLHDGSTDDAIRTFFTEVHELY--LLMNPFYAYDSPVISPAFDQRVKALARKLL 255
N YL++VDK N Q VS FLTAG K MLLH G ++D I+ FFT+V+ELY L MNPFY YD+P+ S AFD R +++AR+ L
Sbjct: 58 NMYLKVVDKVNHQQVSTFLTAGNIKFMLLHSGKSEDGIKNFFTDVYELYVKLSMNPFYKYDTPITSKAFDIRARSIARRYL 138
BLAST of mRNA_M-pyrifera_M_contig13463.5967.1 vs. uniprot
Match: A0A1E7EU74_9STRA (Putative spondyloepiphyseal dysplasia n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EU74_9STRA) HSP 1 Score: 100 bits (248), Expect = 3.560e-25 Identity = 47/81 (58.02%), Postives = 61/81 (75.31%), Query Frame = 1
Query: 19 NRYLRLVDKFNEQNVSAFLTAGGAKLMLLHDGSTDDAIRTFFTEVHELY--LLMNPFYAYDSPVISPAFDQRVKALARKLL 255
N YL++VDK N+Q VS FLTAG K +LLH G ++D I+ FF EVHELY L MNPFY YD+P+ S FD+RV+ +AR+L+
Sbjct: 60 NMYLKVVDKVNQQYVSTFLTAGNIKFLLLHSGKSEDTIKIFFQEVHELYVQLSMNPFYRYDTPITSKEFDKRVRNVARRLV 140
BLAST of mRNA_M-pyrifera_M_contig13463.5967.1 vs. uniprot
Match: A0A151Z5J3_9MYCE (Trafficking protein particle complex subunit 2 n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151Z5J3_9MYCE) HSP 1 Score: 99.4 bits (246), Expect = 6.410e-25 Identity = 44/85 (51.76%), Postives = 64/85 (75.29%), Query Frame = 1
Query: 1 HVPAVPNRYLRLVDKFNEQNVSAFLTAGGAKLMLLHDGSTDDAIRTFFTEVHELYL--LMNPFYAYDSPVISPAFDQRVKALARK 249
HV N YL+++DK+N+ N+S+++TAG KLMLLH+ +D IR+FFTEVH++YL L+NPFY +++P+ SP FD RV+ L K
Sbjct: 49 HVWKSNNMYLKIIDKYNKYNISSYVTAGQIKLMLLHEKKDEDPIRSFFTEVHDIYLKYLLNPFYTFNTPITSPTFDARVRKLGAK 133
BLAST of mRNA_M-pyrifera_M_contig13463.5967.1 vs. uniprot
Match: A0A7R9WLH9_9STRA (Trafficking protein particle complex subunit n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WLH9_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 1.040e-24 Identity = 48/79 (60.76%), Postives = 59/79 (74.68%), Query Frame = 1
Query: 25 YLRLVDKFNEQNVSAFLTAGGAKLMLLHDGSTDDAIRTFFTEVHELYLL--MNPFYAYDSPVISPAFDQRVKALARKLL 255
YLR+VDK N Q VSAF TAG K MLLH G +DD IR FF EV+ELY+ MNPFY YD+P+ S FD+RV+++AR+ L
Sbjct: 62 YLRVVDKVNHQQVSAFQTAGNIKFMLLHAGKSDDTIRNFFNEVYELYVKVSMNPFYHYDTPITSKEFDKRVRSVARRYL 140 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig13463.5967.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig13463.5967.1 >prot_M-pyrifera_M_contig13463.5967.1 ID=prot_M-pyrifera_M_contig13463.5967.1|Name=mRNA_M-pyrifera_M_contig13463.5967.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=86bp HVPAVPNRYLRLVDKFNEQNVSAFLTAGGAKLMLLHDGSTDDAIRTFFTEback to top mRNA from alignment at M-pyrifera_M_contig13463:3611..4521+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig13463.5967.1 ID=mRNA_M-pyrifera_M_contig13463.5967.1|Name=mRNA_M-pyrifera_M_contig13463.5967.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=911bp|location=Sequence derived from alignment at M-pyrifera_M_contig13463:3611..4521+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig13463:3611..4521+ >mRNA_M-pyrifera_M_contig13463.5967.1 ID=mRNA_M-pyrifera_M_contig13463.5967.1|Name=mRNA_M-pyrifera_M_contig13463.5967.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=516bp|location=Sequence derived from alignment at M-pyrifera_M_contig13463:3611..4521+ (Macrocystis pyrifera P11B4 male)back to top |