mRNA_M-pyrifera_M_contig13436.5960.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig13436.5960.1 vs. uniprot
Match: D7FSR1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSR1_ECTSI) HSP 1 Score: 187 bits (475), Expect = 2.270e-57 Identity = 99/108 (91.67%), Postives = 104/108 (96.30%), Query Frame = 1
Query: 1 MADKEKKKSRKERQRELRMLEKEISGGKSLIDYGKVNQRHMDDNRFERELKHKEVLQKQADHGASKEAEQAPSSTYDAFMRMQTGQETRTIADKINDPNRVSWEQFRK 324
MAD KKKSRKERQRELRMLEK+ISGGKS+IDYGKVN+RHMDD RFERELKHKEVLQKQAD GASKE+EQAPS+TYDAFMRMQTGQETRTIADKINDPNRVSWEQFRK
Sbjct: 1 MADS-KKKSRKERQRELRMLEKDISGGKSVIDYGKVNERHMDDKRFERELKHKEVLQKQADQGASKESEQAPSATYDAFMRMQTGQETRTIADKINDPNRVSWEQFRK 107
BLAST of mRNA_M-pyrifera_M_contig13436.5960.1 vs. uniprot
Match: A0A836CAI5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAI5_9STRA) HSP 1 Score: 100 bits (250), Expect = 1.730e-23 Identity = 61/124 (49.19%), Postives = 81/124 (65.32%), Query Frame = 1
Query: 1 MADKEKKKSRKERQRELRMLEKEISGGKSLIDYGKVNQRHMDDNRFERELKHKEVLQK---------------QADHGASKEAEQAPSSTYDAFMRMQTGQETRTIADKINDPNRVSWEQFRKV 327
M+DK +K S+KER++E R LE+ + GG S +DY KV+ RH+DD RFEREL+HK+ L+ QA + APS+ YDAF+RMQ G RTIADKINDPNR++W+ F+KV
Sbjct: 1 MSDK-RKLSKKEREKEHRRLERGVQGG-SGVDYSKVSDRHVDDKRFERELEHKKNLEAAPYAIGKGEAGAGGDQASRTKTLLLHAAPSAAYDAFIRMQAGLGERTIADKINDPNRITWDHFKKV 122
BLAST of mRNA_M-pyrifera_M_contig13436.5960.1 vs. uniprot
Match: A0A7S3Y9Y5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y9Y5_HETAK) HSP 1 Score: 86.7 bits (213), Expect = 4.060e-19 Identity = 53/104 (50.96%), Postives = 73/104 (70.19%), Query Frame = 1
Query: 16 KKKSRKERQRELRMLEKEISGGKSLIDYGKVNQRHMDDNRFERELKHKEVLQKQADHGASKEA-EQAPSSTYDAFMRMQTGQETRTIADKINDPNRVSWEQFRK 324
KKK+RKER RELR + GG ++Y ++ RH DD RFEREL+ K+ LQ+++ +E +APS+TYDAFMRM TGQ+ RTI +KI D NR +W+Q++K
Sbjct: 8 KKKTRKERLRELRD-DGFAKGG--TVNYSVIHDRHKDDVRFERELEFKQKLQEESGKMEDEEGGAKAPSATYDAFMRMATGQQERTIQEKIADSNRPTWDQYKK 108
BLAST of mRNA_M-pyrifera_M_contig13436.5960.1 vs. uniprot
Match: A0A7S2SNX5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SNX5_9STRA) HSP 1 Score: 86.3 bits (212), Expect = 1.980e-18 Identity = 52/107 (48.60%), Postives = 69/107 (64.49%), Query Frame = 1
Query: 19 KKSRKERQRELRMLEKEISGGKSL-IDYGKVNQRHMDDNRFERELKHKEVLQKQADHGASKEAEQAP----SSTYDAFMRMQTGQETRTIADKINDPNRVSWEQFRK 324
KKSRKER E R E+++ K + Y KV RH+DD RFEREL K+ +Q +E + A S+TYDAFMRM TG++ RTIADKIND NR +W++++K
Sbjct: 11 KKSRKERLAEQRAFERDLGLNKGTGVRYDKVADRHLDDVRFERELAFKKSMQPGGKAEVGEEMQAAAPAQSSATYDAFMRMATGRQERTIADKINDSNRPTWDEYKK 117
BLAST of mRNA_M-pyrifera_M_contig13436.5960.1 vs. uniprot
Match: A0A812SC88_SYMMI (Hypothetical protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812SC88_SYMMI) HSP 1 Score: 73.9 bits (180), Expect = 8.600e-14 Identity = 40/78 (51.28%), Postives = 53/78 (67.95%), Query Frame = 1
Query: 91 IDYGKVNQRHMDDNRFERELKHKEVLQKQADHGASKEAEQAPSSTYDAFMRMQTGQETRTIADKINDPNRVSWEQFRK 324
++Y +V + +DD R ERE KE +KQ D A + + QA SST+DAF RM G E RT+A+KI DPNR SWEQ++K
Sbjct: 20 VNYAQVLEHRIDDKRHERE---KEYKRKQMDGTAVQPSRQAASSTFDAFQRMAAGLEGRTLAEKIADPNRPSWEQYKK 94
BLAST of mRNA_M-pyrifera_M_contig13436.5960.1 vs. uniprot
Match: W2QV57_PHYPN (Uncharacterized protein n=17 Tax=Phytophthora TaxID=4783 RepID=W2QV57_PHYPN) HSP 1 Score: 73.6 bits (179), Expect = 1.470e-13 Identity = 43/85 (50.59%), Postives = 57/85 (67.06%), Query Frame = 1
Query: 85 SLIDYGKVNQRHMDDNRFERELKHKEVLQ----KQADHGASKEAEQAP-SSTYDAFMRMQTGQETRTIADKINDPNRVSWEQFRK 324
S +DY +V R +DDNRFER+ + +Q H +K A AP S+T DAFMRM TG+E RTIAD+I+DPNR +WEQ++K
Sbjct: 13 SGVDYSQVLDRQIDDNRFERQRAIRVASSAPPAEQPKHAGAKAA--APQSATMDAFMRMMTGKEERTIADRISDPNRPTWEQYKK 95
BLAST of mRNA_M-pyrifera_M_contig13436.5960.1 vs. uniprot
Match: A0A0W8CWD2_PHYNI (Lysine methyltransferase METTL21D protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A0W8CWD2_PHYNI) HSP 1 Score: 73.9 bits (180), Expect = 4.370e-13 Identity = 43/85 (50.59%), Postives = 57/85 (67.06%), Query Frame = 1
Query: 85 SLIDYGKVNQRHMDDNRFERELKHKEVLQ----KQADHGASKEAEQAP-SSTYDAFMRMQTGQETRTIADKINDPNRVSWEQFRK 324
S +DY +V R +DDNRFER+ + +Q H +K A AP S+T DAFMRM TG+E RTIAD+I+DPNR +WEQ++K
Sbjct: 13 SGVDYSQVLDRQIDDNRFERQRAIRAASSAPPAEQPKHAGAKAA--APQSATMDAFMRMMTGKEERTIADRISDPNRPTWEQYKK 95
BLAST of mRNA_M-pyrifera_M_contig13436.5960.1 vs. uniprot
Match: H3GHF7_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GHF7_PHYRM) HSP 1 Score: 72.8 bits (177), Expect = 1.090e-12 Identity = 43/85 (50.59%), Postives = 57/85 (67.06%), Query Frame = 1
Query: 85 SLIDYGKVNQRHMDDNRFERELKHKEVLQ----KQADHGASKEAEQAP-SSTYDAFMRMQTGQETRTIADKINDPNRVSWEQFRK 324
S +DY +V R +DD RFER+ + ++ H A+K A AP S+T DAFMRM TG+E RTIAD+I+DPNR +WEQF+K
Sbjct: 13 SGVDYSQVQDRQVDDERFERQRAIRAASAAAPAEKPQHAAAKGA--APQSATMDAFMRMVTGKEERTIADRISDPNRPTWEQFKK 95
BLAST of mRNA_M-pyrifera_M_contig13436.5960.1 vs. uniprot
Match: A0A2P4WXE5_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4WXE5_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 3.860e-12 Identity = 42/86 (48.84%), Postives = 57/86 (66.28%), Query Frame = 1
Query: 85 SLIDYGKVNQRHMDDNRFERELKHKEVLQ-----KQADH-GASKEAEQAPSSTYDAFMRMQTGQETRTIADKINDPNRVSWEQFRK 324
S +DY +V R +DD+RFER+ + +Q+ H GA A Q S+T DAFMRM TG+E RTIAD+I+DPNR +WEQ++K
Sbjct: 15 SGVDYSQVRDRQVDDDRFERQRAIRAATAAPPPIEQSKHVGAQATAPQ--SATMDAFMRMMTGKEERTIADRISDPNRPTWEQYKK 98
BLAST of mRNA_M-pyrifera_M_contig13436.5960.1 vs. uniprot
Match: M4C6C3_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C6C3_HYAAE) HSP 1 Score: 71.2 bits (173), Expect = 3.870e-12 Identity = 39/84 (46.43%), Postives = 53/84 (63.10%), Query Frame = 1
Query: 85 SLIDYGKVNQRHMDDNRFERELKHKEVLQ----KQADHGASKEAEQAPSSTYDAFMRMQTGQETRTIADKINDPNRVSWEQFRK 324
S +DY +V R +DD RFER+ + + +Q A A S+T DAFMRM TG+E RTIAD+I+DPNR +WEQ++K
Sbjct: 14 SGVDYSQVQDRQIDDQRFERQRRIRAASSAPPAEQPPTNGGTNAGVAQSATMDAFMRMVTGKEERTIADRISDPNRPTWEQYKK 97 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig13436.5960.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig13436.5960.1 >prot_M-pyrifera_M_contig13436.5960.1 ID=prot_M-pyrifera_M_contig13436.5960.1|Name=mRNA_M-pyrifera_M_contig13436.5960.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=111bp MADKEKKKSRKERQRELRMLEKEISGGKSLIDYGKVNQRHMDDNRFERELback to top mRNA from alignment at M-pyrifera_M_contig13436:4546..8689+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig13436.5960.1 ID=mRNA_M-pyrifera_M_contig13436.5960.1|Name=mRNA_M-pyrifera_M_contig13436.5960.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=4144bp|location=Sequence derived from alignment at M-pyrifera_M_contig13436:4546..8689+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig13436:4546..8689+ >mRNA_M-pyrifera_M_contig13436.5960.1 ID=mRNA_M-pyrifera_M_contig13436.5960.1|Name=mRNA_M-pyrifera_M_contig13436.5960.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=666bp|location=Sequence derived from alignment at M-pyrifera_M_contig13436:4546..8689+ (Macrocystis pyrifera P11B4 male)back to top |