mRNA_M-pyrifera_M_contig1336.5933.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig1336.5933.1 vs. uniprot
Match: D8LKT4_ECTSI (DUF202 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKT4_ECTSI) HSP 1 Score: 249 bits (636), Expect = 1.120e-79 Identity = 158/251 (62.95%), Postives = 184/251 (73.31%), Query Frame = 1
Query: 1 YSGASDAAISRTIDNALGLPRGTPAVVRDPEDDSALAISDSIPSGVTLHAK--PAASPPTH------RSDDGFHGGSSDSGKGRGVEGGSNNGDSRQ------GVGDGXXXXXXXXXXXAK-EFRGELLKFERVNAHLANERTWLAWVRTALSVXXXXXXXXXXADDMLTTSMDSVALALGVAFVLCTLFTYLTGWLRYTRVKEVLTWTGSQVSGKFNRFGLQYFSYLLGVSLVFTVPIYLIAGVDVIEKA 708
++GASD AI+RTI+ AL LPRGTPAVVRDPED SALA+SDS+P G+T+ A PA S + S +GF+G RG G + N D++ G+G XXXXXXXXXXXA EFRGELLKFERVNAHLANERTWLAWVRTALSV DDM + +MDS A+ALGVAFV CTLFTY+TGWLRYTRVKEVLTWTGSQV G+F RFGL+YF++ LG SLV TVP+Y IAGV+V+E A
Sbjct: 34 FAGASDEAITRTIELALRLPRGTPAVVRDPEDGSALAVSDSLPDGLTVDATAVPACSGGDNDRRRAESSGNGFYG--------RGESGNNKNSDAKPAHDSAGGIGXXXXXXXXXXXXXAAHEFRGELLKFERVNAHLANERTWLAWVRTALSVLGVALSLISLTDDMGSATMDSTAMALGVAFVACTLFTYMTGWLRYTRVKEVLTWTGSQVKGRFGRFGLKYFTWFLGASLVLTVPVYFIAGVNVVEDA 276
BLAST of mRNA_M-pyrifera_M_contig1336.5933.1 vs. uniprot
Match: A0A7S3YD22_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YD22_HETAK) HSP 1 Score: 121 bits (304), Expect = 3.620e-30 Identity = 84/222 (37.84%), Postives = 116/222 (52.25%), Query Frame = 1
Query: 1 YSGASDAAISRTIDNALGLPRGTPAVVRDPEDDSALAISDSIPSGVTLHAKPAASPPTHRSDDGFHGGSSDSGKGRGVEGGSNNGDSRQGV-GDGXXXXXXXXXXXAKEFRGELLKFERVNAHLANERTWLAWVRTALSVXXXXXXXXXXADDMLTTSMDSVALALGVAFVLCTLFTYLTGWLRYTRVKEVLTWTGSQVSGKFNRFGLQYFSYLLGVSLVFT 663
Y G +D + + I ++ LP T ++ D D++ +A+S S+PSG+ L +P P+ RGV + D + GDG +EF+GELLKFERVNAHLANERTWLAWVRTAL+V +D + + V LG ++ L TY TGWLRY +V+E+L GS + KFNRFGL + + L V L+ T
Sbjct: 30 YDGTTDEGLEKLIADSFSLPSKTRFILIDSADNTTIALSSSLPSGIELQIQPLEGDPSFDEQR------------RGVLNKKASPDPDEAADGDGSGLQ-------GQEFQGELLKFERVNAHLANERTWLAWVRTALAVLSSAFTFLGLTEDFASGTQIFV-FVLGGFYIGNVLLTYGTGWLRYAQVREILGLPGSMIKPKFNRFGLSHQARYLAVLLLVT 231
BLAST of mRNA_M-pyrifera_M_contig1336.5933.1 vs. uniprot
Match: A0A7S2Y0E1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0E1_9STRA) HSP 1 Score: 120 bits (300), Expect = 1.450e-29 Identity = 84/233 (36.05%), Postives = 121/233 (51.93%), Query Frame = 1
Query: 1 YSGASDAAISRTIDNALGLPRGTPAVVRDPEDDSALAISDSIPSGVTLH------------AKPAASPPTHRSDDGFHGGSSDSGKGRGVEGGSNNGDSRQGVGDGXXXXXXXXXXXAKEFRGELLKFERVNAHLANERTWLAWVRTALSVXXXXXXXXXXADDMLTTSMDSVALALGVAFVLCTLFTYLTGWLRYTRVKEVLTWTGSQVSGKFNRFGLQYFSYLLGVSLVFT 663
+ GA+DA++ R + +A LP + ++ DP D +A+S+++PSG+ L+ AK + + R D DS K G+E +GD G K+FRGELLKFERVNAHLANERT+LAWVRTALSV +D + + G +V+ LFTY TGW+RY++V+ +L S+V +F RFGL + + L +FT
Sbjct: 27 FPGATDASLHRLVLDAFSLPLHSRFLLVDPADGCIVALSENLPSGLVLNVQHVQTQGRDTPAKEGQAYTSARED-------RDSEKSGGLE----SGDDESSTG--------------KKFRGELLKFERVNAHLANERTFLAWVRTALSVLSSAFSIDSLTEDFSDGAFKVMVFIFGCLYVVGVLFTYTTGWVRYSQVRAILGLPASKVKAQFGRFGLSHVAKFLAFLFLFT 234
BLAST of mRNA_M-pyrifera_M_contig1336.5933.1 vs. uniprot
Match: A0A7S2FKJ2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FKJ2_9STRA) HSP 1 Score: 110 bits (275), Expect = 2.110e-26 Identity = 80/210 (38.10%), Postives = 105/210 (50.00%), Query Frame = 1
Query: 1 YSGASDAAISRTIDNALGLPRGTPAVVRDPEDDSALAISDSIPSGVTLHAKPAASPPTHRSDDGFHGGSSDSGKGRGVEGGSNNGDSRQGVGDGXXXXXXXXXXXAKEFRGELLKFERVNAHLANERTWLAWVRTALSVXXXXXXXXXXADDMLTTSMDSVAL-ALGVAFVLCTLFTYLTGWLRYTRVKEVLTWTGSQVSGKFNRFGLQY 627
+ GASD +I +I +AL L + V RD D + +A+S ++PSG+TL P+ S PT + FRG++LKFERV AHLANERTWLAWVRTALS +DD +S +AL +G V LFT++TGWLRY RVK+VL T S++S F RFGL +
Sbjct: 21 FEGASDESIKTSITSAL-LMKADSIVARD-LDGNVVAVSQAMPSGLTLVVDPSDSVPTTTT------------------------------------ARASAEQRTLNFRGQVLKFERVQAHLANERTWLAWVRTALSALTIAFSLLTLSDD--ASSASQLALFVMGSCMVANVLFTFVTGWLRYVRVKDVLMLTRSEMSENFGRFGLSH 190
BLAST of mRNA_M-pyrifera_M_contig1336.5933.1 vs. uniprot
Match: A0A7S2WVC3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WVC3_9STRA) HSP 1 Score: 100 bits (250), Expect = 2.960e-22 Identity = 53/111 (47.75%), Postives = 68/111 (61.26%), Query Frame = 1
Query: 325 FRGELLKFERVNAHLANERTWLAWVRTALSVXXXXXXXXXXADDMLTTSMDSVALALGVAFVLCTLFTYLTGWLRYTRVKEVLTWTGSQVSGKFNRFGLQYFSYLLGVSLV 657
FRG++LKFERV AHLANERTWLAWVRTAL+ +DD + +G V+ LFT++TGWLRY RVK+VL ++S +F RFGL + + L LV
Sbjct: 115 FRGQVLKFERVQAHLANERTWLAWVRTALAALSISFTLLTLSDDATKDWLALFLFVVGCLMVVNVLFTFITGWLRYVRVKDVLMLRKQEMSDEFGRFGLSHHARFLSALLV 225
BLAST of mRNA_M-pyrifera_M_contig1336.5933.1 vs. uniprot
Match: F0YI70_AURAN (Expressed protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YI70_AURAN) HSP 1 Score: 95.5 bits (236), Expect = 1.710e-20 Identity = 49/120 (40.83%), Postives = 70/120 (58.33%), Query Frame = 1
Query: 325 FRGELLKFERVNAHLANERTWLAWVRTALSVXXXXXXXXXXADDMLTTSMDSVALALGVAFVLCTLFTYLTGWLRYTRVKEVLTWTGSQVSGKFNRFGLQYFSYLLGVSLVFTVPIYLIA 684
FR +L+KFE + AHLANERTWLAWVRT+LS D + + V LG F++ +LTGWLRY R+++VL T +V F+R G+++ + L+G+ +F YL A
Sbjct: 88 FRKQLIKFENIQAHLANERTWLAWVRTSLSALSVAFSLLTLVGDSRESWLAVVLFLLGSGFIVSVFTAFLTGWLRYARIRDVLMLTKREVPAHFHRIGVRHQARLMGLLFIFLTATYLCA 207
BLAST of mRNA_M-pyrifera_M_contig1336.5933.1 vs. uniprot
Match: A0A7S2GM95_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GM95_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 4.170e-20 Identity = 53/121 (43.80%), Postives = 68/121 (56.20%), Query Frame = 1
Query: 325 FRGELLKFERVNAHLANERTWLAWVRTALSVXXXXXXXXXXADDMLTTSMDSVALALGVAFVLCTLFTYLTGWLRYTRVKEVLTWTGSQVSGKFNRFGLQYFSYLLGVSLVFTVPIYLIAG 687
FRG++LKFERV AHLANERTWLAWVRTALS +D+ + +G V L T++TGWLRY RVK+VL +S F R GL + + L + L+F + I G
Sbjct: 67 FRGQVLKFERVQAHLANERTWLAWVRTALSALSIAFSLLTLSDESTKQWLKVTLFVVGSLMVANVLMTFVTGWLRYVRVKDVLMLDKQDMSANFGRLGLSHQARFLSL-LLFVISFAYITG 186
BLAST of mRNA_M-pyrifera_M_contig1336.5933.1 vs. uniprot
Match: A0A7S3K4A5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K4A5_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 6.310e-19 Identity = 47/124 (37.90%), Postives = 71/124 (57.26%), Query Frame = 1
Query: 316 AKEFRGELLKFERVNAHLANERTWLAWVRTALSVXXXXXXXXXXADDMLTTSMDSVALALGVAFVLCTLFTYLTGWLRYTRVKEVLTWTGSQVSGKFNRFGLQYFSYLLGVSLVFTVPIYLIAG 687
++ FR +L+KFE + AHLANERT+LAW+RTAL+ D + + ALG AFV T+LTGWLR+ R++++L +QV F+R GL + +Y + + +YL+ G
Sbjct: 79 SRGFRRQLIKFENIQAHLANERTFLAWIRTALASLSISFSLLALVADASKNWLAACLYALGAAFVFSVFTTFLTGWLRFARIRDILMLAQNQVPTDFHRIGLSHQAYFIAILCGLLTFLYLVGG 202
BLAST of mRNA_M-pyrifera_M_contig1336.5933.1 vs. uniprot
Match: A0A7S2G4H1_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G4H1_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 7.360e-19 Identity = 47/123 (38.21%), Postives = 72/123 (58.54%), Query Frame = 1
Query: 325 FRGELLKFERVNAHLANERTWLAWVRTALSVXXXXXXXXXXADDMLTTSMDSVALALGVAFVLCTLFTYLTGWLRYTRVKEVLTWTGSQVSGKFNRFGLQYFSYLLGVSLVFTVPIYLIAGVD 693
F+ ++LKF+R+NAHLANERTWLAW+RT S+ A+D + + A+G A ++ FTY+TGW+RY +VKE+L + K R L+Y ++L+ +L +Y + G D
Sbjct: 58 FQKQMLKFDRINAHLANERTWLAWIRTTFSLLSCGLTLQTYANDSSSGTWHWWLFAVGCATIVSMDFTYMTGWIRYGKVKEILQQNKEVLGPKMGRLKLKYQTFLVFGTLCTVAVVYWMGGYD 180
BLAST of mRNA_M-pyrifera_M_contig1336.5933.1 vs. uniprot
Match: A0A7S2DFA2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DFA2_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 2.760e-14 Identity = 47/121 (38.84%), Postives = 67/121 (55.37%), Query Frame = 1
Query: 322 EFRGELLKFERVNAHLANERTWLAWVRTALSVXXXXXXXXXXADDMLTTSMDSVALAL---GVAFVLCTLFTYLTGWLRYTRVKEVLTWTGSQVSGKFNRFGLQYFSYLLGVSLVFTVPIY 675
+F+ + +KFERV +HLANERTWLAW+R AL++ D + +++LAL G+ +VL T + GWLRY R K +L + + F G+ + LLG LVFTV Y
Sbjct: 98 QFQDQYVKFERVLSHLANERTWLAWIRAALTMLSSAFTIWKLYDSVNDKIHPTISLALYSLGLCYVLVVPLTVVVGWLRYERTKHILGLSKVDIHEYFGSLGVVIQAALLGSVLVFTVGCY 218 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1336.5933.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig1336.5933.1 >prot_M-pyrifera_M_contig1336.5933.1 ID=prot_M-pyrifera_M_contig1336.5933.1|Name=mRNA_M-pyrifera_M_contig1336.5933.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=237bp YSGASDAAISRTIDNALGLPRGTPAVVRDPEDDSALAISDSIPSGVTLHAback to top mRNA from alignment at M-pyrifera_M_contig1336:21697..22590- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig1336.5933.1 ID=mRNA_M-pyrifera_M_contig1336.5933.1|Name=mRNA_M-pyrifera_M_contig1336.5933.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=894bp|location=Sequence derived from alignment at M-pyrifera_M_contig1336:21697..22590- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig1336:21697..22590- >mRNA_M-pyrifera_M_contig1336.5933.1 ID=mRNA_M-pyrifera_M_contig1336.5933.1|Name=mRNA_M-pyrifera_M_contig1336.5933.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1422bp|location=Sequence derived from alignment at M-pyrifera_M_contig1336:21697..22590- (Macrocystis pyrifera P11B4 male)back to top |