mRNA_M-pyrifera_M_contig1335.5928.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig1335.5928.1 vs. uniprot
Match: A0A6H5J8U9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8U9_9PHAE) HSP 1 Score: 161 bits (408), Expect = 1.750e-45 Identity = 78/139 (56.12%), Postives = 97/139 (69.78%), Query Frame = 1
Query: 1 TIIGVSANAYDTRPGEDYNMKGCGQDGCAPRLSRDDISD-DPESRWSCAQMIVPDGGLCEIEFVFQDPQDIKEVQVAFWKGDVRSRTLEVSVNDEVIGEFDSYTGAIFNTLDIQGVEVDRMRFTSVNLAEDEWISLLEV 414
T +GV+A AYD RPGE GCG+ GC P L+ D + + D ESRWSCA+ IVPDGG CEI F F PQDI +VQVAFWKGD R+RTL+V +N + IGE++SY G+ FN+ IQ V + SV + D+WISLLEV
Sbjct: 258 TTVGVTATAYDDRPGESAGDVGCGEMGCLPDLAHDGVGEEDTESRWSCAEEIVPDGGQCEISFTFDSPQDITDVQVAFWKGDERTRTLKVKINGDKIGEYESYPGSTFNSFGIQENGVHTVTMESVGIDRDDWISLLEV 396
BLAST of mRNA_M-pyrifera_M_contig1335.5928.1 vs. uniprot
Match: A0A6H5JFX1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JFX1_9PHAE) HSP 1 Score: 154 bits (389), Expect = 3.050e-43 Identity = 73/138 (52.90%), Postives = 95/138 (68.84%), Query Frame = 1
Query: 1 TIIGVSANAYDTRPGEDYNMKGCGQDGCAPRLSRDDISDDPESRWSCAQMIVPDGGLCEIEFVFQDPQDIKEVQVAFWKGDVRSRTLEVSVNDEVIGEFDSYTGAIFNTLDIQGVEVDRMRFTSVNLAEDEWISLLEV 414
T I SA +D RPG+ GCG+ GC P L+ D I+DD ESRWSCA+ IVPDGG CEIEF F PQ++K++QV FWKG+ R+RTL+V +N E GEFDS+ G++ + D+ +V + S+ L DEWISLLEV
Sbjct: 198 TAIAASATGFDERPGQASGDHGCGKYGCLPVLATDGITDDVESRWSCAEDIVPDGGQCEIEFTFSHPQNLKQLQVDFWKGEERTRTLKVKINGEKFGEFDSHPGSVTSYFDVIAYDVHTVTLESLGLDTDEWISLLEV 335
BLAST of mRNA_M-pyrifera_M_contig1335.5928.1 vs. uniprot
Match: D7G3F6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3F6_ECTSI) HSP 1 Score: 148 bits (374), Expect = 2.770e-42 Identity = 72/144 (50.00%), Postives = 97/144 (67.36%), Query Frame = 1
Query: 1 TIIGVSANAYDTRPGEDYNMKGCGQ---DGCAPRLSRDDISDDPESRWSCAQMIVPDGGLCEIEFVFQDPQDIKEVQVAFWKGDVRSRTLEVSVNDEVIGEFDSYTGAIFNTLDIQGVEVDRMRFTSVNLAEDEWISLLEVSVY 423
T + VSA A+DTRPG GCG+ +GC P +RD IS++ ESRWSCA IVP GG C+IE+VF +PQDI+++QVAFWKGD R RTLEV + + +SY G+ FN L + + + SV+L E+EWISL+EV ++
Sbjct: 79 TDVSVSATAHDTRPGSSSGDVGCGEAGGNGCTPANTRDGISNEAESRWSCASKIVPGGGPCQIEYVFGEPQDIEDIQVAFWKGDERVRTLEVYFDGTLYRTHESYAGSTFNPLGVSATGISSVMLESVDLLENEWISLIEVLIF 222
BLAST of mRNA_M-pyrifera_M_contig1335.5928.1 vs. uniprot
Match: D7FI81_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI81_ECTSI) HSP 1 Score: 144 bits (362), Expect = 1.550e-39 Identity = 70/144 (48.61%), Postives = 95/144 (65.97%), Query Frame = 1
Query: 1 TIIGVSANAYDTRPGEDYNMKGCGQ---DGCAPRLSRDDISDDPESRWSCAQMIVPDGGLCEIEFVFQDPQDIKEVQVAFWKGDVRSRTLEVSVNDEVIGEFDSYTGAIFNTLDIQGVEVDRMRFTSVNLAEDEWISLLEVSVY 423
T + VSA A+DTRPG GCG+ DGCA + D I + ESRWSCA M+VPD G C+IEF F DPQDI ++QVAFW+G+ R+RT+++ ++ E+ +SY + FNTL + E + SV+L DEWISLLEV ++
Sbjct: 163 TEVNVSATAHDTRPGSSSGDVGCGETGGDGCAAIKAHDGIISEIESRWSCATMLVPDEGPCQIEFSFADPQDIVDIQVAFWEGNERTRTVDIFIDGELTHTHESYADSTFNTLGVTATEASTVMLESVDLLSDEWISLLEVLIF 306
BLAST of mRNA_M-pyrifera_M_contig1335.5928.1 vs. uniprot
Match: D7FI77_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI77_ECTSI) HSP 1 Score: 137 bits (346), Expect = 1.070e-38 Identity = 70/142 (49.30%), Postives = 90/142 (63.38%), Query Frame = 1
Query: 7 IGVSANAYDTRPGEDYNMKGCGQDG---CAPRLSRDDISDDPESRWSCAQMIVPDGGLCEIEFVFQDPQDIKEVQVAFWKGDVRSRTLEVSVNDEVIGEFDSYTGAIFNTLDIQGVEVDRMRFTSVNLAEDEWISLLEVSVY 423
+GVSA A+DTRPG GCG+ G C +RD I + ESRWSCA +VPD G C+IEF F +PQ I ++QVAFWKG+ R+RTL V VN E+ +SYT + FNTL + E + S L DEWISL+EV ++
Sbjct: 29 VGVSATAHDTRPGNSSGDVGCGEVGGLGCTATNTRDGIFSEIESRWSCATKLVPDEGPCQIEFTFAEPQHIVDIQVAFWKGNDRTRTLGVHVNGELTHTHESYTDSTFNTLGVTANEASTVMLESTALLSDEWISLIEVLIF 170
BLAST of mRNA_M-pyrifera_M_contig1335.5928.1 vs. uniprot
Match: A0A6H5JTT4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT4_9PHAE) HSP 1 Score: 145 bits (365), Expect = 6.970e-38 Identity = 71/141 (50.35%), Postives = 96/141 (68.09%), Query Frame = 1
Query: 1 TIIGVSANAYDTRPGEDYNMKGCGQ---DGCAPRLSRDDISDDPESRWSCAQMIVPDGGLCEIEFVFQDPQDIKEVQVAFWKGDVRSRTLEVSVNDEVIGEFDSYTGAIFNTLDIQGVEVDRMRFTSVNLAEDEWISLLEV 414
T + VSA AYDTRPG GCG+ +GC+P +RD IS++ ESRWSCA IVP GG C+IE+VF +PQDI++++VAFW GD R RTLEV + + +SY G+ FN+L + + + SV+L E+EWISL+EV
Sbjct: 485 TDVSVSATAYDTRPGSSSGDVGCGEAGGNGCSPANTRDGISNETESRWSCASKIVPGGGPCQIEYVFGEPQDIEDIKVAFWMGDERVRTLEVYFDGTLHRTHESYAGSTFNSLGVSATGIGTVMLESVDLLENEWISLIEV 625
BLAST of mRNA_M-pyrifera_M_contig1335.5928.1 vs. uniprot
Match: D7G5F4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5F4_ECTSI) HSP 1 Score: 136 bits (343), Expect = 1.810e-37 Identity = 70/144 (48.61%), Postives = 93/144 (64.58%), Query Frame = 1
Query: 1 TIIGVSANAYDTRPGEDYNMKGCGQDG---CAPRLSRDDISDDPESRWSCAQMIVPDGGLCEIEFVFQDPQDIKEVQVAFWKGDVRSRTLEVSVNDEVIGEFDSYTGAIFNTLDIQGVEVDRMRFTSVNLAEDEWISLLEVSVY 423
T +GVS+ A+D RPG+D GCG+ G C +RD I + ESRWSCA +V D G C+IEF F +PQ I ++QVAFWKG+ R+RTLEV +N E+ +SY A FNTL + +V + SV L DEWISL+EV ++
Sbjct: 95 TEVGVSSTAHDVRPGDD----GCGEVGGLGCTAANTRDGIFSEIESRWSCATKLVDDEGPCQIEFTFAEPQTIVDIQVAFWKGNERTRTLEVYINGEMTHTHESYADATFNTLGVTATDVSTVMLESVALLSDEWISLIEVLIF 234
BLAST of mRNA_M-pyrifera_M_contig1335.5928.1 vs. uniprot
Match: D8LCQ5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCQ5_ECTSI) HSP 1 Score: 132 bits (332), Expect = 2.900e-37 Identity = 64/113 (56.64%), Postives = 80/113 (70.80%), Query Frame = 1
Query: 79 GCAPRLSRDDISD-DPESRWSCAQMIVPDGGLCEIEFVFQDPQDIKEVQVAFWKGDVRSRTLEVSVNDEVIGEFDSYTGAIFNTLDIQGVEVDRMRFTSVNLAEDEWISLLEV 414
GC P L+ D + + D ESRWSCA+ IVPDGG CEI F F PQDI +VQVAFWKGD R+RTL+V +N + IGE++SY G+ FN+ IQ V + SV + D+WISLLEV
Sbjct: 2 GCLPDLAHDGVGEEDTESRWSCAEEIVPDGGQCEITFTFDSPQDITDVQVAFWKGDERTRTLKVKINGDKIGEYESYPGSTFNSFGIQENGVHTVAMESVGIDADDWISLLEV 114
BLAST of mRNA_M-pyrifera_M_contig1335.5928.1 vs. uniprot
Match: D7FI90_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI90_ECTSI) HSP 1 Score: 133 bits (335), Expect = 4.790e-37 Identity = 71/144 (49.31%), Postives = 88/144 (61.11%), Query Frame = 1
Query: 1 TIIGVSANAYDTRPGEDYNMKGCGQDG---CAPRLSRDDISDDPESRWSCAQMIVPDGGLCEIEFVFQDPQDIKEVQVAFWKGDVRSRTLEVSVNDEVIGEFDSYTGAIFNTLDIQGVEVDRMRFTSVNLAEDEWISLLEVSVY 423
T +GVSA A+D RPG N GCG+ G C +RD I D ESRWSCA +VPD G C+IEF F +PQ+I ++QVAFW + R TLEV VN E+ +SY FNTL + E + SV L DEWISLLEV ++
Sbjct: 27 TEVGVSATAHDVRPGSSGNDVGCGEVGSLGCTATNTRDGIVSDIESRWSCATSLVPDEGPCQIEFTFAEPQNIVDIQVAFWNDNERVSTLEVHVNGELTHTHESYDDT-FNTLGVTATEASTVMLESVALLSDEWISLLEVQIF 169
BLAST of mRNA_M-pyrifera_M_contig1335.5928.1 vs. uniprot
Match: D7FI87_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI87_ECTSI) HSP 1 Score: 139 bits (351), Expect = 5.780e-36 Identity = 71/144 (49.31%), Postives = 92/144 (63.89%), Query Frame = 1
Query: 1 TIIGVSANAYDTRPGEDYNMKGCGQDG---CAPRLSRDDISDDPESRWSCAQMIVPDGGLCEIEFVFQDPQDIKEVQVAFWKGDVRSRTLEVSVNDEVIGEFDSYTGAIFNTLDIQGVEVDRMRFTSVNLAEDEWISLLEVSVY 423
T +GVSA A+D RP + GCGQ G C +RD I D ESRWSCA ++VPD G C+IEF F +PQ++ ++QVAFWKG+ R+RTL V VN E+ +SY + FNTL + E + SV L DEWISLLEV ++
Sbjct: 465 TEVGVSATAHDVRPRSSSDDVGCGQVGGLGCTATNTRDGIVSDIESRWSCATILVPDEGACQIEFSFAEPQNVVDIQVAFWKGNERTRTLWVHVNGELTHTHESYADSTFNTLGVTATEASTVMLESVALLSDEWISLLEVLIF 608 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1335.5928.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig1335.5928.1 >prot_M-pyrifera_M_contig1335.5928.1 ID=prot_M-pyrifera_M_contig1335.5928.1|Name=mRNA_M-pyrifera_M_contig1335.5928.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=141bp TIIGVSANAYDTRPGEDYNMKGCGQDGCAPRLSRDDISDDPESRWSCAQMback to top mRNA from alignment at M-pyrifera_M_contig1335:5444..6657+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig1335.5928.1 ID=mRNA_M-pyrifera_M_contig1335.5928.1|Name=mRNA_M-pyrifera_M_contig1335.5928.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1214bp|location=Sequence derived from alignment at M-pyrifera_M_contig1335:5444..6657+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig1335:5444..6657+ >mRNA_M-pyrifera_M_contig1335.5928.1 ID=mRNA_M-pyrifera_M_contig1335.5928.1|Name=mRNA_M-pyrifera_M_contig1335.5928.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=846bp|location=Sequence derived from alignment at M-pyrifera_M_contig1335:5444..6657+ (Macrocystis pyrifera P11B4 male)back to top |