mRNA_M-pyrifera_M_contig13334.5921.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig13334.5921.1
Unique NamemRNA_M-pyrifera_M_contig13334.5921.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig13334.5921.1 vs. uniprot
Match: A0A6H5L308_9PHAE (Tr-type G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L308_9PHAE)

HSP 1 Score: 409 bits (1051), Expect = 3.500e-134
Identity = 210/242 (86.78%), Postives = 216/242 (89.26%), Query Frame = 1 
Query:    1 QLPDTRCSPEFMASLMETPTLVRHAAVVGHLGHGKTLLMDVLVGQSRVAPFDPQKEVRYTDTRVDEQQRGLSVKSCPVSMVLESTTGKSFLLNLIDCPGHVNFVDESIAAMR---------------ACDGVVLVVDAVEGVMMHTETLVKHALHEGLAITLCINKASETDIVDRLLLELKLPPADAYFKLVHTLEEVNSLIVANSTEVTGPPQRLDPAKGNVCFASAQHGWAFTTGSFAKV 681
            +LPDT+CSPEFMASLMETPTLVRHAAVVGHLGHGKTLLMDVLVGQSRV PFDP KEVRYTDTRVDEQQRGLSVKSCPVSMVLESTTGKS+LLNLIDCPGHVNFVDES+AAM                ACDG+VLVVDAVEGVMMHTETLVKHALHEGLAITLCINK      VDRLLLELKLPPADAYFKLVHTLEEVN+LI ANSTEVTGPPQRLDPAKGNVCFASAQHGWAFTT SFAKV
Sbjct:  115 ELPDTKCSPEFMASLMETPTLVRHAAVVGHLGHGKTLLMDVLVGQSRVKPFDPSKEVRYTDTRVDEQQRGLSVKSCPVSMVLESTTGKSYLLNLIDCPGHVNFVDESVAAMSELVWTVVIVVVAVTGACDGIVLVVDAVEGVMMHTETLVKHALHEGLAITLCINK------VDRLLLELKLPPADAYFKLVHTLEEVNALIAANSTEVTGPPQRLDPAKGNVCFASAQHGWAFTTASFAKV 350
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BLAST of mRNA_M-pyrifera_M_contig13334.5921.1 vs. uniprot
Match: A0A7S2WSH7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WSH7_9STRA)

HSP 1 Score: 288 bits (738), Expect = 3.750e-88
Identity = 149/227 (65.64%), Postives = 176/227 (77.53%), Query Frame = 1 
Query:    1 QLPDTRCSPEFMASLMETPTLVRHAAVVGHLGHGKTLLMDVLVGQSRVAPFDPQKEVRYTDTRVDEQQRGLSVKSCPVSMVLESTTGKSFLLNLIDCPGHVNFVDESIAAMRACDGVVLVVDAVEGVMMHTETLVKHALHEGLAITLCINKASETDIVDRLLLELKLPPADAYFKLVHTLEEVNSLIVANSTEVTGPPQRLDPAKGNVCFASAQHGWAFTTGSFAKV 681
            ++P+   S EFM  LM+ P LVR+ AV+GH  HGKTL MD LV Q++  PFD  KEVRYTD+RVDEQQR LS+KS PVS+VL +T+GK+F LNLIDCPGH N VDES+A +RA DGVVL+VDAVEGVMM TE ++K AL E L + L INK      VDRL++ELKLPPADAY+KLVHT+EEVNSLI  + T VTG P RL PA GNVCFASAQHGW F+  SFAK+
Sbjct:   86 EIPELTVSTEFMRGLMQNPELVRNVAVLGHFHHGKTLFMDTLVQQTQQKPFDAAKEVRYTDSRVDEQQRELSIKSTPVSLVLPNTSGKNFFLNLIDCPGHPNLVDESMAGLRAADGVVLMVDAVEGVMMVTEKVIKAALLERLPLCLVINK------VDRLIIELKLPPADAYYKLVHTIEEVNSLIAQHWTGVTGRPPRLSPALGNVCFASAQHGWCFSLLSFAKI 306
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BLAST of mRNA_M-pyrifera_M_contig13334.5921.1 vs. uniprot
Match: A0A7S3MIT9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MIT9_9STRA)

HSP 1 Score: 268 bits (686), Expect = 1.110e-85
Identity = 138/218 (63.30%), Postives = 165/218 (75.69%), Query Frame = 1 
Query:   28 EFMASLMETPTLVRHAAVVGHLGHGKTLLMDVLVGQSRVAPFDPQKEVRYTDTRVDEQQRGLSVKSCPVSMVLESTTGKSFLLNLIDCPGHVNFVDESIAAMRACDGVVLVVDAVEGVMMHTETLVKHALHEGLAITLCINKASETDIVDRLLLELKLPPADAYFKLVHTLEEVNSLIVANSTEVTGPPQRLDPAKGNVCFASAQHGWAFTTGSFAKV 681
            EF+ SLM TPTL+R+ A++G   HGKT+ +D LV  +    +DP KEVRYTDTR DEQ R LSVKS  VS+VLE+   KS+LLN++DCPGHVNF DES AA+RA DG V+VVDAVEGVMM+TE L+KHAL   L I L INK      +DRL+LELKLPP DAYFKL+HTLEEVN+LIVA+ T  +  PQRL P  GNVCFA+ QHGW+FT  SFA +
Sbjct:  130 EFLTSLMNTPTLIRNIAILGQFHHGKTVFVDTLVAATHADDWDPSKEVRYTDTRKDEQDRQLSVKSTAVSLVLENIKSKSYLLNILDCPGHVNFSDESTAALRAADGAVIVVDAVEGVMMNTERLIKHALQARLPICLVINK------MDRLVLELKLPPQDAYFKLLHTLEEVNNLIVAH-THASAKPQRLSPELGNVCFAAGQHGWSFTLASFAAL 340
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BLAST of mRNA_M-pyrifera_M_contig13334.5921.1 vs. uniprot
Match: W7TM02_9STRA (116 kDa U5 small nuclear ribonucleoprotein component n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TM02_9STRA)

HSP 1 Score: 280 bits (715), Expect = 1.450e-84
Identity = 146/228 (64.04%), Postives = 176/228 (77.19%), Query Frame = 1 
Query:    1 QLPDTRCSPEFMASLMETPTLVRHAAVVGHLGHGKTLLMDVLVGQSRVAPFDPQKEVRYTDTRVDEQQRGLSVKSCPVSMVLESTTGKSFLLNLIDCPGHVNFVDESIAAMRACDGVVLVVDAVEGVMMHTETLVKHALHEGLAITLCINKASETDIVDRLLLELKLPPADAYFKLVHTLEEVNSLIVANSTE-VTGPPQRLDPAKGNVCFASAQHGWAFTTGSFAKV 681
            +LP TR +PEF+ +LMETPTL+R+  V+G L HGKTLLMD+L+ Q++ A +DP KEVRYTDTR DEQ+R LS+KS PVS+VLE T GKSFLLN++D PG VNF DE  AA+RACDG +LVVDAVEGVMM TE L+K AL E LA+ L INK      VDRL+LELKLPPADAY+KL HT+EEVN+ I  ++   +   PQRL PA GNV FASA HGW F+ GSFA +
Sbjct:  120 ELPQTRYTPEFLTTLMETPTLLRNVCVMGALHHGKTLLMDLLIQQTQEAAWDPSKEVRYTDTRKDEQERALSIKSTPVSLVLEDTRGKSFLLNVLDTPGMVNFSDEVSAALRACDGALLVVDAVEGVMMQTERLIKQALREQLALVLVINK------VDRLILELKLPPADAYYKLKHTIEEVNACIERHTPNALVRRPQRLSPALGNVAFASAVHGWCFSLGSFASL 341
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BLAST of mRNA_M-pyrifera_M_contig13334.5921.1 vs. uniprot
Match: A0A7S2V7Q4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V7Q4_9STRA)

HSP 1 Score: 266 bits (680), Expect = 4.750e-82
Identity = 135/227 (59.47%), Postives = 160/227 (70.48%), Query Frame = 1 
Query:    1 QLPDTRCSPEFMASLMETPTLVRHAAVVGHLGHGKTLLMDVLVGQSRVAPFDPQKEVRYTDTRVDEQQRGLSVKSCPVSMVLESTTGKSFLLNLIDCPGHVNFVDESIAAMRACDGVVLVVDAVEGVMMHTETLVKHALHEGLAITLCINKASETDIVDRLLLELKLPPADAYFKLVHTLEEVNSLIVANSTEVTGPPQRLDPAKGNVCFASAQHGWAFTTGSFAKV 681
            +LP T  S EF+A L E P LVRH  V G L HGKTLLMD+L+ Q+    +   KE +YTDTR DE QR LS+KS PVS+VLE+T GKSFLLN++DCPGH NF DE  A MRA DGVV+VVD  EGVM+ TE  + HA+ +GL I L +NK      VDRL+LELKLPPADAYFKL+HTLEEVN L+   ++    PP RL P  GNVCFAS  HGW F+  SFA +
Sbjct:  121 ELPKTTYSLEFLAGLCEAPQLVRHVVVCGQLHHGKTLLMDILISQTHTKAWPAHKETKYTDTRKDEHQRELSIKSTPVSLVLENTRGKSFLLNIMDCPGHPNFADEMTAGMRAADGVVVVVDCAEGVMLGTERAISHAVSQGLPILLVLNK------VDRLILELKLPPADAYFKLLHTLEEVNGLVQGQASAAGVPPPRLSPELGNVCFASGHHGWVFSLTSFADL 341
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BLAST of mRNA_M-pyrifera_M_contig13334.5921.1 vs. uniprot
Match: A0A835Z8L8_9STRA (GTPase of the U5 snRNP particle n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8L8_9STRA)

HSP 1 Score: 272 bits (696), Expect = 5.550e-82
Identity = 144/225 (64.00%), Postives = 170/225 (75.56%), Query Frame = 1 
Query:    4 LPDTRCSPEFMASLMETPTLVRHAAVVGHLGHGKTLLMDVLVGQSRVAPFDPQKEVRYTDTRVDEQQRGLSVKSCPVSMVLES-TTGKSFLLNLIDCPGHVNFVDESIAAMRACDGVVLVVDAVEGVMMHTETLVKHALHEGLAITLCINKASETDIVDRLLLELKLPPADAYFKLVHTLEEVNSLIVANSTEVTGPPQRLDPAKGNVCFASAQHGWAFTTGSFA 675
            LP+TR S EF+A+LMETP L+R+ A+ GHL HGKTLL D L+  +R AP D  +E R TDTR DEQ RGLS+KS PVS+VL S  +GKS+L+N++D PGHVNF  E+ AA+ ACDGVVLVVDAVEGVMM TE L + AL  GL++ L INK      VDRL+LELKLPP DAYFKL HTLEEVN+L+      V G P RLDPA+GNVCFASA HGW F+ GSFA
Sbjct:   99 LPETRYSLEFLAALMETPALIRNVALAGHLHHGKTLLADALLAATRAAPRDAAREPRLTDTRHDEQARGLSIKSTPVSLVLPSGASGKSYLVNVVDTPGHVNFEAEAAAALAACDGVVLVVDAVEGVMMQTERLARIALAGGLSVCLVINK------VDRLILELKLPPRDAYFKLQHTLEEVNALLARCWAGVAGAPPRLDPARGNVCFASALHGWCFSVGSFA 317
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BLAST of mRNA_M-pyrifera_M_contig13334.5921.1 vs. uniprot
Match: A0A5D6YFB3_9STRA (Tr-type G domain-containing protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YFB3_9STRA)

HSP 1 Score: 270 bits (690), Expect = 8.590e-81
Identity = 139/226 (61.50%), Postives = 173/226 (76.55%), Query Frame = 1 
Query:    4 LPDTRCSPEFMASLMETPTLVRHAAVVGHLGHGKTLLMDVLVGQSRVAPFDPQKEVRYTDTRVDEQQRGLSVKSCPVSMVLESTTGKSFLLNLIDCPGHVNFVDESIAAMRACDGVVLVVDAVEGVMMHTETLVKHALHEGLAITLCINKASETDIVDRLLLELKLPPADAYFKLVHTLEEVNSLIVANSTEVTGPPQRLDPAKGNVCFASAQHGWAFTTGSFAKV 681
            +P T  S EFM SLM+ P L+RH AV+G L HGKTL +D+LV Q+ V  +DP KE RYTDTR+DEQQR +SVKS PVS+VL S+ GK +L+NL+DCPGHVNF DES AA++  DG VLVVDA+EGVMM+TE L+K AL   +A+ L +NK      VDRL++ELKLPP DAYFKL+HT+EEVN++I A+ T V    QRL P +GNVCFAS QHGW+FT  SFA++
Sbjct:  130 VPKTTYSTEFMTSLMDHPQLLRHVAVIGDLHHGKTLFLDLLVQQTHVDKWDPAKERRYTDTRLDEQQRRVSVKSTPVSLVLPSSRGKHYLVNLLDCPGHVNFSDESTAALQVADGAVLVVDAIEGVMMNTERLIKAALKARVALVLVVNK------VDRLIVELKLPPVDAYFKLLHTIEEVNAVIAAH-TPVGHTQQRLSPERGNVCFASGQHGWSFTLESFAQL 348
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BLAST of mRNA_M-pyrifera_M_contig13334.5921.1 vs. uniprot
Match: H3G917_PHYRM (Tr-type G domain-containing protein n=20 Tax=Phytophthora TaxID=4783 RepID=H3G917_PHYRM)

HSP 1 Score: 263 bits (671), Expect = 2.330e-78
Identity = 135/227 (59.47%), Postives = 170/227 (74.89%), Query Frame = 1 
Query:    1 QLPDTRCSPEFMASLMETPTLVRHAAVVGHLGHGKTLLMDVLVGQSRVAPFDPQKEVRYTDTRVDEQQRGLSVKSCPVSMVLESTTGKSFLLNLIDCPGHVNFVDESIAAMRACDGVVLVVDAVEGVMMHTETLVKHALHEGLAITLCINKASETDIVDRLLLELKLPPADAYFKLVHTLEEVNSLIVANSTEVTGPPQRLDPAKGNVCFASAQHGWAFTTGSFAKV 681
            ++P T  S +F+ SLM+ P LVRH AV+G L HGKTL +D+LV Q+ V  +DP  E R+TDTR DEQ R LS+KS PVS+VL ++ GK +LLN++DCPGHVNF DE+ AA++  DG VLVVDA+EGVMM+TE +VK AL   +AI L +NK      VDRL++ELKLPPADAYFKL+HT+EEVN++I AN T      QRL P  GNVCFAS QHGW+FT  SFA++
Sbjct:  109 KVPQTTYSTQFLTSLMDHPQLVRHVAVLGDLHHGKTLFVDLLVQQTHVDKWDPALETRFTDTRKDEQDRKLSIKSTPVSLVLPTSRGKHYLLNVLDCPGHVNFSDETTAALQVADGAVLVVDAIEGVMMNTERVVKAALRANVAIVLVVNK------VDRLIIELKLPPADAYFKLLHTIEEVNAIIDAN-TPAGREKQRLSPELGNVCFASGQHGWSFTLESFAQI 328
[Close]
BLAST of mRNA_M-pyrifera_M_contig13334.5921.1 vs. uniprot
Match: A0A0N7L529_PLAHL (116 kDa u5 small nuclear ribonucleoprotein component-like n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L529_PLAHL)

HSP 1 Score: 262 bits (670), Expect = 3.340e-78
Identity = 134/225 (59.56%), Postives = 168/225 (74.67%), Query Frame = 1 
Query:    7 PDTRCSPEFMASLMETPTLVRHAAVVGHLGHGKTLLMDVLVGQSRVAPFDPQKEVRYTDTRVDEQQRGLSVKSCPVSMVLESTTGKSFLLNLIDCPGHVNFVDESIAAMRACDGVVLVVDAVEGVMMHTETLVKHALHEGLAITLCINKASETDIVDRLLLELKLPPADAYFKLVHTLEEVNSLIVANSTEVTGPPQRLDPAKGNVCFASAQHGWAFTTGSFAKV 681
            P T  S EF+ SLM  P L+RH A++G L HGKTL  D+LV Q+ V  ++P  E RYTDTR DEQ+R +S+KS PVS+VL ++ GK FLLN++DCPGHVNF DES AA++  DG VLVVDA+EGVMM+TE LVK AL   +AI L +NK      VDRL++ELKLPPADAYFKL+HT+EE+N++I+AN T      QR+ P  GNVCFAS QHGW+FT  SFA++
Sbjct:  114 PRTTYSTEFLTSLMNHPQLIRHVAILGDLHHGKTLFTDLLVQQTHVDKWNPALEKRYTDTRKDEQERKVSIKSTPVSLVLPTSKGKHFLLNVLDCPGHVNFSDESTAALQVADGAVLVVDAIEGVMMNTERLVKAALRANVAIVLVLNK------VDRLIIELKLPPADAYFKLLHTIEEINAVIIAN-TPADQEKQRVSPELGNVCFASGQHGWSFTLESFAQI 331
[Close]
BLAST of mRNA_M-pyrifera_M_contig13334.5921.1 vs. uniprot
Match: A0A8K1FK92_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FK92_PYTOL)

HSP 1 Score: 262 bits (670), Expect = 4.070e-78
Identity = 137/226 (60.62%), Postives = 169/226 (74.78%), Query Frame = 1 
Query:    4 LPDTRCSPEFMASLMETPTLVRHAAVVGHLGHGKTLLMDVLVGQSRVAPFDPQKEVRYTDTRVDEQQRGLSVKSCPVSMVLESTTGKSFLLNLIDCPGHVNFVDESIAAMRACDGVVLVVDAVEGVMMHTETLVKHALHEGLAITLCINKASETDIVDRLLLELKLPPADAYFKLVHTLEEVNSLIVANSTEVTGPPQRLDPAKGNVCFASAQHGWAFTTGSFAKV 681
            +P T  S EFM SLM+ P L+R+ AV+G L HGKTLLMD+LV Q+ V  +DP KE R+TDTR DEQ+R +S+KS PVS+VL S+ GK +LLNLIDCPGHVNF DES AA++  DG  LVVDA+EGVMM+TE L+K AL   + + L I+K      VDRL++ELKLPP DAYFKL+HT+EEVN++I ANS       QRL P  GNVCFAS QHGW+FT  SFA++
Sbjct:  131 VPKTTYSTEFMTSLMDHPQLIRNVAVIGDLHHGKTLLMDLLVQQTHVDKWDPTKEKRFTDTRKDEQERQVSIKSTPVSLVLPSSRGKHYLLNLIDCPGHVNFSDESTAALQIADGAALVVDAIEGVMMNTERLIKAALKARVKLMLVISK------VDRLIVELKLPPEDAYFKLLHTIEEVNAIIAANSPG-EDDKQRLSPELGNVCFASGQHGWSFTLESFAQI 349
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig13334.5921.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L308_9PHAE3.500e-13486.78Tr-type G domain-containing protein n=2 Tax=Ectoca... [more]
A0A7S2WSH7_9STRA3.750e-8865.64Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3MIT9_9STRA1.110e-8563.30Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
W7TM02_9STRA1.450e-8464.04116 kDa U5 small nuclear ribonucleoprotein compone... [more]
A0A7S2V7Q4_9STRA4.750e-8259.47Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A835Z8L8_9STRA5.550e-8264.00GTPase of the U5 snRNP particle n=1 Tax=Tribonema ... [more]
A0A5D6YFB3_9STRA8.590e-8161.50Tr-type G domain-containing protein (Fragment) n=1... [more]
H3G917_PHYRM2.330e-7859.47Tr-type G domain-containing protein n=20 Tax=Phyto... [more]
A0A0N7L529_PLAHL3.340e-7859.56116 kDa u5 small nuclear ribonucleoprotein compone... [more]
A0A8K1FK92_PYTOL4.070e-7860.62Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig13334contigM-pyrifera_M_contig13334:295..7140 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score416.8
Seed ortholog evalue6.6e-114
Seed eggNOG ortholog2880.D8LIZ9
Preferred nameEF-TU
KEGG koko:K12852
KEGG Pathwayko03040,map03040
KEGG ModuleM00354,M00355
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000166,GO:0000244,GO:0000375,GO:0000377,GO:0000387,GO:0000398,GO:0000974,GO:0001672,GO:0001882,GO:0001883,GO:0003006,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005682,GO:0005684,GO:0005730,GO:0005737,GO:0005829,GO:0005886,GO:0005911,GO:0006139,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0007275,GO:0008150,GO:0008152,GO:0008380,GO:0009506,GO:0009790,GO:0009791,GO:0009793,GO:0009908,GO:0009987,GO:0010154,GO:0010467,GO:0010847,GO:0015030,GO:0016020,GO:0016043,GO:0016070,GO:0016071,GO:0016462,GO:0016604,GO:0016607,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0022414,GO:0022607,GO:0022613,GO:0022618,GO:0030054,GO:0030312,GO:0030532,GO:0031445,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032991,GO:0033043,GO:0033044,GO:0034622,GO:0034641,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043900,GO:0043933,GO:0044085,GO:0044087,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0045595,GO:0045694,GO:0046483,GO:0046540,GO:0048316,GO:0048367,GO:0048437,GO:0048608,GO:0048731,GO:0048856,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0051239,GO:0055044,GO:0061458,GO:0065003,GO:0065007,GO:0070013,GO:0071007,GO:0071013,GO:0071014,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0090304,GO:0090567,GO:0097159,GO:0097367,GO:0097525,GO:0097526,GO:0099402,GO:0120114,GO:1901265,GO:1901360,GO:1901363,GO:1902275,GO:1902494,GO:1902802,GO:1990904,GO:2000026,GO:2000241
EggNOG free text desc.GTPase activity
EggNOG OGsCOG0480@1,KOG0468@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03041
Exons5
Model size681
Cds size681
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig13334.5921.1prot_M-pyrifera_M_contig13334.5921.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig13334 295..7140 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815814.1375363-CDS-M-pyrifera_M_contig13334:294..4341622815814.1375363-CDS-M-pyrifera_M_contig13334:294..434Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13334 295..434 +
1692277583.752265-CDS-M-pyrifera_M_contig13334:294..4341692277583.752265-CDS-M-pyrifera_M_contig13334:294..434Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13334 295..434 +
1622815814.1479874-CDS-M-pyrifera_M_contig13334:1614..18091622815814.1479874-CDS-M-pyrifera_M_contig13334:1614..1809Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13334 1615..1809 +
1692277583.766444-CDS-M-pyrifera_M_contig13334:1614..18091692277583.766444-CDS-M-pyrifera_M_contig13334:1614..1809Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13334 1615..1809 +
1622815814.1576889-CDS-M-pyrifera_M_contig13334:4508..46441622815814.1576889-CDS-M-pyrifera_M_contig13334:4508..4644Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13334 4509..4644 +
1692277583.7801206-CDS-M-pyrifera_M_contig13334:4508..46441692277583.7801206-CDS-M-pyrifera_M_contig13334:4508..4644Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13334 4509..4644 +
1622815814.1677675-CDS-M-pyrifera_M_contig13334:5557..56321622815814.1677675-CDS-M-pyrifera_M_contig13334:5557..5632Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13334 5558..5632 +
1692277583.7948794-CDS-M-pyrifera_M_contig13334:5557..56321692277583.7948794-CDS-M-pyrifera_M_contig13334:5557..5632Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13334 5558..5632 +
1622815814.1822782-CDS-M-pyrifera_M_contig13334:7005..71401622815814.1822782-CDS-M-pyrifera_M_contig13334:7005..7140Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13334 7006..7140 +
1692277583.8120165-CDS-M-pyrifera_M_contig13334:7005..71401692277583.8120165-CDS-M-pyrifera_M_contig13334:7005..7140Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13334 7006..7140 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig13334.5921.1

>prot_M-pyrifera_M_contig13334.5921.1 ID=prot_M-pyrifera_M_contig13334.5921.1|Name=mRNA_M-pyrifera_M_contig13334.5921.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=227bp
QLPDTRCSPEFMASLMETPTLVRHAAVVGHLGHGKTLLMDVLVGQSRVAP
FDPQKEVRYTDTRVDEQQRGLSVKSCPVSMVLESTTGKSFLLNLIDCPGH
VNFVDESIAAMRACDGVVLVVDAVEGVMMHTETLVKHALHEGLAITLCIN
KASETDIVDRLLLELKLPPADAYFKLVHTLEEVNSLIVANSTEVTGPPQR
LDPAKGNVCFASAQHGWAFTTGSFAKV
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mRNA from alignment at M-pyrifera_M_contig13334:295..7140+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig13334.5921.1 ID=mRNA_M-pyrifera_M_contig13334.5921.1|Name=mRNA_M-pyrifera_M_contig13334.5921.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=6846bp|location=Sequence derived from alignment at M-pyrifera_M_contig13334:295..7140+ (Macrocystis pyrifera P11B4 male)
CAGCTGCCGGACACTCGCTGCTCCCCGGAGTTCATGGCCTCCTTGATGGA
AACCCCGACTCTGGTTCGGCACGCGGCCGTGGTCGGCCACCTGGGGCACG
GGAAGACGCTTCTCATGGACGTGCTGGTCGGGCAGAGCAGGTGGAGAGGG
TTTGTTTTTTTCGGGGGGGTTTTTTCCCCCCGCCATAATTGTAATTGGTG
GAGCTGGCCATGTGACTTTGGACTACGGTTACCGGGGAACATATTACCTG
GGAGCATAGTAAATAGGACATATGGTACACATAAAAACCTATACATTTCC
CTATTTCTACTAATAGTATGTCATCCTATTTACCATGGTCCCCCGCAATA
GTAATGATACCTAAATGTGGTGTGTAAACATATTGAAGGGATACCTGTTT
TTTGGGTCCATCTTTGGTTCTGATTGCTATGCCCCCCCGTTATACGTAAT
ATTACCGGGTAATACGAATTATTAATAGTACCGGGTGATATGCATTATTA
CCGGGTAATATATATATATCATTACCGGGTAACGTGTATCATTACCGGGT
AATATTATCATTACCGGGTAATATGTATCATTACCGGGAAACATAGTAAT
CAGAACCAAATATGGTGTCTAAACACGGGGAGAGACTACCTGGTTTTTGA
GTCCATCGTGGGTTCTGATTACTATGGCCCCTTAATATGTAATATTACCG
GGTAATATTAATTGTTACCGGAAAACCTAGTAATCAGAACCATATATGGT
GTGTAAACATAGGGAGACACCTTTTTTTTGGGGGTCCATCGGGGGTTCTG
ATTACTTTGGCCCCTCGTAATATGTAATATTACCGGGTAATATTAATTAT
TACCAGGGAGCATAGTAATCAAAACAAAATATGGTGTGCAAACATAGGGG
GATACCTGTTTTTTTGCCCGTCGTGGGTTTTGATTAGTATGGCCCACCGC
CGTGGCGATGAATGCTAACTCTTTTATTACTACTGCACGCGCATTTTTTT
TGCGGAAATATGACTTAGAATTAGTATAGACTTTATTTTCTGCTGTGGTG
CAAGGGTTAACGTGACAATGACTGATAATACATACGCTGCTGTACACTAT
TGCTGTACACTGCGGTATACTTGTGTACACTGGTGTAAAGACCAAGCCAC
ACACAACGCCACGCTTTTTTGTTTGGTTTGATTTGGGTTGGGTCGGTCTC
GTCTGGATGCGCGGTCAATGGTGGGATGGCTATGGTAAAAAGATAATCAG
TACCCCCCCTTTTCCCCCCCCCTTGGCAACCTCGCTAACCCTCATGTGAA
AACCTTACTCTCTCGCGCAGGGTTGCGCCGTTCGACCCTCAGAAAGAGGT
TCGATACACGGACACAAGGGTGGACGAGCAGCAGCGGGGGCTGTCGGTGA
AGTCTTGCCCGGTGTCCATGGTGCTGGAGAGCACGACGGGGAAGTCGTTC
CTGCTGAACCTCATCGACTGCCCCGGGCACGTCAACTTCGTCGACGAGAG
CATCGCCGCCATGAGGTGAGGGGAGATTTGTTGTTGGGTGTTGTAGTCTG
GTGTCGCAGTAGATTCTGTGTGTTTGCTTGCTTGGTAAAGTAGGTGTTGG
CAGAAGGTGTTGCTGTGGTATGGGTGTTGCAGTTCGTGTCGCACCGCAGG
TGTTGCAGTAGGTGGTACAGCACGTAATGAGGTAGTAAGGGGGCTATACT
TGGTATCGCAGTAGGCGTTGCAGTAGACAGCACAATAGGTGGGGTAGTAG
GTGTTACAGCAGTGGTAAAGGTGCTCTGTAATAGTTCAGGTCAGTGAAGG
GGCTATACTTGGTATCGCAGTAGGTGTTGCAGTAGACAACACAGTAGGTG
GGACAGTAGGTGTTACAGCAGTAGTAAAGGTGCTCTACAATAGTTCGTGT
AACAGTAGGGGTTTCGACGGGAGGAGGCGACTGCCAAAGCCTCACGGTGT
ATGCTCATCGTTTTCACGCGATCCATCTGATCCGTCTGATTCGCTCCGAT
CCGCCCAATTCAACTAATAATATTACGGGGGACCATAGTAAATAGGACCA
AATACTGCTATTGCGGGGGTCCATAGTTAACAGGACCTATGGCATACATA
AAAACCTACCAGGTATATATTTAGGTATTTTTACTAACAATATTTGGCCC
TGTTACCTATGGACCCCCGTAATAGTAAGAATAGGTAAAATATATAGGTT
TTCATGTATACCATAGGTCCTGTTAACTATGGACCCCCGTAATAGTCGAT
TTGCAGTATTAAATACTAGAAGTTGAACCACGAATGACATTGACCCGTTG
AGGACCGCACTCCCGTCGTGGGAACAACACACTTGGAATTAGTGTTAGAT
GTAGGTGTGTGCAAAGTGCGGCACTAAAAGGGTGAACTCATTTCGGACTT
TTTTCAGGTATCGCGACCAAAACTGTGGCAGGTGCAGTCTTACCAACCAT
CTAATACAGGGTGGGCCTATGTAGTAAGAATCAGAACCCAAGATGGACCC
CAAAACCATGCATTCCCCTATGTTTGCACACCATGTTTGGTTCTGATATA
CTATGCTTCCCGGTAGAAATGGAAGCGCGCAGTAGACGACTAGTAATACT
TTGTTTATTGTTGAATAGTAGGGGTCCCTCCATACTACCGGTGTAACAAT
GCGGGGTGCCCGATAGACATGATGCCGGTGAATTCGCTCGGCGCGTATGG
GTTAACCAGTGTGACAAGTGCGCGGATTTCTGCCGGTACGGTACCCGCTA
TAGTGCCGTTGTAATGGCCTGGCACATACCGGCACTATAGAGAGGGACCA
TTATTGCGGAGGACCATAGTAAATAGCACCTACGATACACACAAAAACCT
ATATATTTTCCTATTTTTACTAACAAAATTTGGTCCCATTTACTACTGCA
TGGTCCCCCGTAATAGTGTGCGACAATATAGTGCCACGCTGCCCGCGTGT
CGGAGACCATCTTGCACTTAATTGCCGCGACCGGTTCGACGACAGGGGTT
GCGATCAGGGTATAAAAGTAGTACTTTTTGCCTTGCAAGACAAATATGTT
CTGACTAAATGGGGCTTCTCCAATGAGGAACTACCTGGTACCTATGAATA
GTAATATTACATATATATATATATTTTTTTGCTTTTGTTTTCCGATATAT
TGACCTTGTATACGTTGTTTTTTAGTTTTTTATAAATATAGACCATGGGA
TTTTGCTTGCTCAAATCGTTTTTGTTCAAGCGTGGCGCTTTGTCTTTTGA
ATACATGCCCTTTTTGGGGTGGTTTTTGCAAGAGCTCCTGAATTAAGCAA
GGAGAAGCCTGATAATATGGTAGGTGCGCCCACTCCCCTGTCGCCGTATG
TATTGGGTACAACTCCCTCAGCAGCAGCAGCAGCAGCAGTAGCAGCAGCA
TCTACTGTTGTAGTTCGGGCTTCTTCGTGTGATCGATGCTTCTCCTGTGC
CGGTACAGTATAGGTCCACGATAGATGCATCGAGTACATCTCCTCCCTCA
GCAGCAGCAGCAGCAGCAGCAGCCACGATATACATAAGAGATAACCTATT
TGAGCAAGAAAAGAAGGCTTACTTTTTGGGGCGACGCTATGTACCTGGCA
AGAAATTTAGATTAAGAAAATCGTGCTCAGCGGCGAGCGCTACACGGAAC
CCTATATAACAGTATTTGCTCAAGTTTGTTCAAGAACGGTGTCACAATAA
GGTTCTGAAGCTTTTTTTTGCTCTGGATTACTACTAGTAATAGGCGTTTT
CTCGTTGGCGAGCCCGTACTGTACACCAGTCACTTTTGTTCGAGATTGTT
TTTCCCCTTCCAACAATGCAGTCCCGTTTTGGCGACAAACTACTCACAAT
TTGAGCGGTTTTTGCCCAAAACGTGACTGCAGCCCAAACAGGCTTGAGGC
ATGCCTTGGAAGTCTCAAAGGGCCTATACACACGATATCATTCTTGGACG
ACTCGCCTGGTTCATCATCTGATCCATCTGATCCACCTGACCCACCCCAT
CTGATCCATCTGACCCGCTTACGCAGCTTCGCGTTTTTTTTTTCTGGGAT
AATTTACGTAAATGGAATCAGACTTTGGATGGATTACGTCGCGGTAAGTA
GTGGACGGGTCAATGCCTGGTATATATATACCAAGTATATTTAAGGATCG
TCTGATTCGTCCCCGACTTTTAGCTGTGTGATGGTCGAATGTGATGGTTT
TTTGGCCGCGGCAGGGCGTGTGACGGGGTCGTGCTTGTCGTCGACGCTGT
GGAGGGCGTGATGATGCACACCGAGACGCTCGTCAAGCACGCGCTGCACG
AGGGGTTGGCGATCACCCTCTGCATTAACAAGGCAAGCGAGACAGACATT
GTCGGTGGTGGTGGTGGTGGTGGTGGCGGTAGGTGGTGTAGTGGGTGGCG
GTGGTGGTGGTGGTGGTGGTGGTGGTGGTAGTGGTGGCGGTAGGTGGTGT
AGTGGGTGGCGGTGGTGGTGGTGGGATGGGGGGGGGTGTACTCGATATCG
TGCATAGCCTTCGTCGTATGAGCATAGACCCTTGCATGCCTTCAACGCCG
GGACGGAGCATGCCGGGTTTTCACCGACCGGGCGAGAAGACATTGCTTGC
AGCAAGTGCGAAGCGCCGCGAGGTGTCTGGCGAGTCGCATGAAGAGTGGG
CCGCATTCTGCTAAGAACCGCTTGTGAGGCGGACTTGCATATGGATGACA
GCTTCAATGATTTGAGTTATTTTCCGGTGTGGCCACTTCTAGAGGTGGGG
GGGGTGGTCTTGGTGGTGCTGGTACTGTTGTTTTTTCTCGGACGTGCTGT
TGCTGGGTGCTGCGTCCACTGCGCGGTGTTCGGTAGTATTGTCGTGGGTT
AGACTGCCCATCATAGCGTTCAAGTCCCATAACGTTCATCGGGCAAGGAG
GACGACTGGAAATACCTAGAACCTATGCGTGCGGCATGGGTTTTCATGAG
TATGGTGTGCTCAATGCCATGTATGGCCAGAGTCGCAAGACCATAGACCC
CCGCATCCCTGCAATACCGGAACCGAGCGCGTCGGGTTTTCACTGACCTG
ACAGACATTTCTTGCGTCGCGCGCGAAGCGTCGTTAGTTCGGCAAGTGTT
AGTTGAAGCCATATTCCAGGTCTGCCGCTCGGTTTTGAATCCACGTTCAT
TCCCTCCCCCCCCCCGCCTCCCGTCATTTCCCATCCCCGCAAAAATACGC
TTATTATGTATATGTATACCTGGTTTTCTGTTAATACCGCTATTACTGTA
TTGAATATACCAGGTGGACCGTCTCCTGCTTGAACTAAAGCTGCCTCCGG
CGGATGCGTACTTCAAGCTCGTCCACACCCTGGAAGAGGTGCGGCTCTAC
GTCGAAGAATATTCCGAGAAAAATCCTCGCGAAGACTACGAGCAATGTTG
TGTTCTGTAATGTCATACTTGTCTACGACGTAGATAATTATAACCAGTGT
ACTTTATACCAGTATATAATGTCGGTACTATATGGTAGTGCAGGCATCTA
GTTTTGATTTGGTTGGGTGTTCGAAAGGTGTCTGTTCGAGGAGGGTAGAG
AGAGAGAATGGTCGTTGTCATACCCCAGTCGTTGAAAGCATGACAACACG
GGGAGGCTTGACACCCAGCCCCGGCTGGCGCGCTGTGAGAAATCGCCGGC
CAGGCACGGCTAGGCCAAGCCAGGCTGTCGGTGTAGTCGGCTGCGCTCGC
GGAGCAAGCCTTGTTTTTTTTTTGTGAGCCGTCGATGGGCGGTCGGTGTC
CTTGCCCCCGAAGAGGTGGATGGTGAAAGCTTAAGATTTAGCGATACATC
GCGTATATTACCTGGTGACTGCACTGTGTTCGTGGTGTATATACTACCGC
TTGCTGTCTTGTCTTGTCCCTACTCTTGTAAGTTGCTGCCGCACTCCATT
TGCTTGTATAAATCATGTGACTGAACGACGAAAGAGATAGCTTTGCGTTA
GTTGGTCGATTGGCTGTTTAGTTGGTTAGTTGGTTTCCTTTGTTAGCTGT
TACGGGGGTCCATAGTTAATGGGACCAATTTTTTTTTAGTAAAAATAGGT
AAATATATAGGTTTTTGTGTATACGATAGGTCCTATTAACTACGGACCCC
CGTAATAGTTGGTTGGTTAGTTGGTTGATTGGCTGGTTGGTTGATTCATT
AGTTGGTTGGTTGGCTGGTCAGTTGATTGACTGGTTGGTTGGTTGGTGTG
GTTGGTAGGCTGGTTGGTTGGTTAATGTGTTGATTCGTTGGTCGGTTGAT
CAGGTGGTTAGTTGGCTGGTATCGCCCTGATGTCCCCGTTGTCATAAAAC
CTTTACCCCCCCCTCCCTTCAGATATGAATAGTCCCGTTCCGGCCCTCCC
CCCCCCCTACGACTATGGCCATGCACGACATGAGTACACCCCCCCCCCCC
CTAACCGAAAAAATAAACATACGAAGTAGGTGTATCTCGAAAAAAACGTA
GTGAGCGCTTAAAAGTTGGTGTCTATTAGGAGTAGGAAAGGTGCTCCGTC
TCGAAAGAGGTGCGTGGTCAATGCCCAAAAGACTAAAGCGATCAACAAAC
AAGTACCTCCCGCCCCCCTCCCCGAGAATCTATGGTCATTCAACTACGGC
CATGCAGACATGAGTACACCTCTCTCCCCGTCCGTCCGTCCGTCCGTTTT
GCCGTCAATTTCTGTCTGTTTCTTTGTGTTTAATGTGTTTTTGAACAACT
GTAATGCACAGGTGAACTCGTTGATCGTGGCGAACAGCACGGAGGTCACG
GGACCTCCTCAACGGCTCGACCCTGCCAAGGGGAACGTTTGCTTCGCCTC
GGCACAGCACGGCTGGGCCTTCACGACGGGCTCGTTTGCCAAGGTG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig13334:295..7140+

>mRNA_M-pyrifera_M_contig13334.5921.1 ID=mRNA_M-pyrifera_M_contig13334.5921.1|Name=mRNA_M-pyrifera_M_contig13334.5921.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1362bp|location=Sequence derived from alignment at M-pyrifera_M_contig13334:295..7140+ (Macrocystis pyrifera P11B4 male)
CAGCTGCCGGACACTCGCTGCTCCCCGGAGTTCATGGCCTCCTTGATGGA
AACCCCGACTCTGGTTCGGCACGCGGCCGTGGTCGGCCACCTGGGGCACG
GGAAGACGCTTCTCATGGACGTGCTGGTCGGGCAGAGCAGCAGCTGCCGG
ACACTCGCTGCTCCCCGGAGTTCATGGCCTCCTTGATGGAAACCCCGACT
CTGGTTCGGCACGCGGCCGTGGTCGGCCACCTGGGGCACGGGAAGACGCT
TCTCATGGACGTGCTGGTCGGGCAGAGCAGGGTTGCGCCGTTCGACCCTC
AGAAAGAGGTTCGATACACGGACACAAGGGTGGACGAGCAGCAGCGGGGG
CTGTCGGTGAAGTCTTGCCCGGTGTCCATGGTGCTGGAGAGCACGACGGG
GAAGTCGTTCCTGCTGAACCTCATCGACTGCCCCGGGCACGTCAACTTCG
TCGACGAGAGCATCGCCGCCATGAGGGTTGCGCCGTTCGACCCTCAGAAA
GAGGTTCGATACACGGACACAAGGGTGGACGAGCAGCAGCGGGGGCTGTC
GGTGAAGTCTTGCCCGGTGTCCATGGTGCTGGAGAGCACGACGGGGAAGT
CGTTCCTGCTGAACCTCATCGACTGCCCCGGGCACGTCAACTTCGTCGAC
GAGAGCATCGCCGCCATGAGGGCGTGTGACGGGGTCGTGCTTGTCGTCGA
CGCTGTGGAGGGCGTGATGATGCACACCGAGACGCTCGTCAAGCACGCGC
TGCACGAGGGGTTGGCGATCACCCTCTGCATTAACAAGGCAAGCGAGACA
GACATTGGCGTGTGACGGGGTCGTGCTTGTCGTCGACGCTGTGGAGGGCG
TGATGATGCACACCGAGACGCTCGTCAAGCACGCGCTGCACGAGGGGTTG
GCGATCACCCTCTGCATTAACAAGGCAAGCGAGACAGACATTGTGGACCG
TCTCCTGCTTGAACTAAAGCTGCCTCCGGCGGATGCGTACTTCAAGCTCG
TCCACACCCTGGAAGAGGTGGACCGTCTCCTGCTTGAACTAAAGCTGCCT
CCGGCGGATGCGTACTTCAAGCTCGTCCACACCCTGGAAGAGGTGAACTC
GTTGATCGTGGCGAACAGCACGGAGGTCACGGGACCTCCTCAACGGCTCG
ACCCTGCCAAGGGGAACGTTTGCTTCGCCTCGGCACAGCACGGCTGGGCC
TTCACGACGGGCTCGTTTGCCAAGGTGGTGAACTCGTTGATCGTGGCGAA
CAGCACGGAGGTCACGGGACCTCCTCAACGGCTCGACCCTGCCAAGGGGA
ACGTTTGCTTCGCCTCGGCACAGCACGGCTGGGCCTTCACGACGGGCTCG
TTTGCCAAGGTG
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