mRNA_M-pyrifera_M_contig1333.5914.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig1333.5914.1
Unique NamemRNA_M-pyrifera_M_contig1333.5914.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig1333.5914.1 vs. uniprot
Match: D7G5C1_ECTSI (Sulfhydryl oxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5C1_ECTSI)

HSP 1 Score: 459 bits (1181), Expect = 9.960e-149
Identity = 227/433 (52.42%), Postives = 291/433 (67.21%), Query Frame = 1
Query:    1 WERVGATIRGP-IHVGAINCIEHRDLCHSFKVHSYPSLVGVNWPGAPEGTPEEPAINMFKFGSHSFKDTMANIETAFPGLLKVDELTQGVEEGNLGLAMKA--------GRKGDAVWRTRPVPCELLLEDAAVSVQWVLRYDVFTQGLRLTDKRMGALLSFLDLLATTLPGKFNRLSFRNLSNELRNDPGLNDIGRWDKRVENFQVGSFELNEEPNWRGANMLTGTEAHANHLTSGLWSLFHALSLSSAPMRQQPYAIMESIHSFVDNFFRCEHCRSHFLEMYGTCENHRCDIPLASNLRGNQLPEGQDKLALWVWRMHNAVNARVALDQDETAEVH-KSFWPSAEDCVHCWEAFPPEKDQPPWSEPDVLQFLASRYSCPNAVEEGPDLSGSSWAVKCVAVLAAVSLLMWARRKLGKWGVGLSKKRCDTLPSM 1269
            WERVG  +R   +HVGA+NC++HR+LC S  V SYP+L+ +N PG P GT ++PA  + K G+HSF+  M  I+  F G+L+   +        + + +K         G++  +  R    PC L +EDAAVSV++VLR +VFTQG  L ++RMGALLSFL+LLATT PGK NR+SFR+L+ +LR DP LNDI RWDKR+ NF +GSF   +  NW  AN+  GTE   +H TSGLWSLFH LS+S APM+Q PYA+ME I SFVDNFFRCE CRSHF+EMY TC+N RCDIP  +N+RG    +G+  LALWVWR HN VN R+AL+ DE    + +  WPSA+ C  CW  FP  KD+P WSE +VL+ L   +SCP    EGPD SG  WAV  V + A V+++MWARR     GVGLSKKR D+ P +
Sbjct:   19 WERVGTALRDTQVHVGAVNCLKHRELCSSLHVPSYPTLMAINSPGEPGGTADDPAKKVLKKGTHSFEAVMDLIKGEFAGVLENVTVPDAAAVEVVNVKVKGREKDRRVRGQRRASEERGAGAPCILRIEDAAVSVRFVLRNEVFTQGTSLDEERMGALLSFLELLATTFPGKMNRVSFRSLATDLRRDPSLNDIARWDKRIGNFHIGSFAPGKRDNWPAANIERGTEPEVSHYTSGLWSLFHLLSVSEAPMKQNPYAVMEGIASFVDNFFRCEVCRSHFMEMYSTCDNGRCDIPKPANVRGQHTSQGEPALALWVWRAHNTVNGRLALEGDEEVGPYDRGLWPSAKACKQCWSGFPQGKDKPSWSETEVLKLLKRTFSCPEIAGEGPDASGRGWAVNGVMLCAVVAVVMWARRWTELRGVGLSKKRGDSAPDV 451          
BLAST of mRNA_M-pyrifera_M_contig1333.5914.1 vs. uniprot
Match: A0A7S2WSV1_9STRA (Sulfhydryl oxidase (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WSV1_9STRA)

HSP 1 Score: 137 bits (344), Expect = 1.140e-30
Identity = 104/350 (29.71%), Postives = 156/350 (44.57%), Query Frame = 1
Query:   43 GAINCIEHRDLCHSFKVHSYPSLVGVNWPGAPEGTPEEPAINMFKFGSHSFKDTMANIETAFPGL---LKVDELTQGVEEGNLGLAMKAGRKGDAVW--RTRP--VPCELLLEDAAVSVQWVLRYDVFTQGLRLTDKRMGALLSFLDLLATTLPG-KFNRLSFRNLSNELRNDPGLNDIGRWDKRVENFQVGSFE----LNEEPNWRGANMLTGTEAHANHLTSGLWSLFHALSLSSAPMRQQPYAIMESIHSFVDNFFRCEHCRSHFLEMYGTCENHRCDIPLASNLRGNQLPEGQDKLALWVWRMHNAVNARVALDQDETAEVHKS-----------FWPSAEDCVHC 1023
            GA +C+  + +C + K++ +P++   + PG P             F S      +   E+    +   L ++  T    +G    A +A       W   + P   P +  L DAA S+++ L+Y VF  G  L   R+ ALL  L  L+   PG + NR S   L +++ +  G     +WD  +  +  G F      +   N R A+ + G+       T GLW+LFH L+ S       P   M ++  +VD+FF C HCR HFL+M+  C   RCDI        ++  E Q  LALW+WR HN VN+RVA++  E A    S            WPS E C  C
Sbjct:   97 GAFDCVRFKTVCSANKINGFPTVKAFHVPGEPRS-----------FSSRGVTLKVRKFESWVEWVHDHLDLERRTPAHADGGSASAAQAPDTAVPRWPRSSSPGVFPPQRRLLDAATSLRFGLQYGVFVDGATLDASRLKALLDLLQDLSQMFPGSRVNRDSLGVLHDQVADGKGQLSSEQWDDLLGRWSFGKFSGDFAWSTMCNPR-ADEVDGSPHVTAGYTCGLWTLFHMLTFSGPRAGLSPGRTMATVRGYVDHFFGCSHCRQHFLQMFDECWGGRCDIG------DDRSEESQRALALWLWRAHNTVNSRVAVESAELAASPDSPLVAPELQAWALWPSTELCPAC 428          
BLAST of mRNA_M-pyrifera_M_contig1333.5914.1 vs. uniprot
Match: A0A3L8E373_OOCBI (Sulfhydryl oxidase (Fragment) n=3 Tax=Ooceraea biroi TaxID=2015173 RepID=A0A3L8E373_OOCBI)

HSP 1 Score: 92.4 bits (228), Expect = 1.710e-15
Identity = 52/157 (33.12%), Postives = 83/157 (52.87%), Query Frame = 1
Query:  679 GLWSLFHALSLSSAPMR-----QQPYAIMESIHSFVDNFFRCEHCRSHFLEMYGTCENHRCDIPLASNLRGNQLPEGQDKLALWVWRMHNAVNARVALDQDETAEVHKSFWPSAEDCVHCWEAFPPEKDQPPWSEPDVLQFLASRYSCPNAVEEGPD 1134
            GLW++FH LS++ A  +     Q P A++ ++H ++ NFF C  C +HF++     EN   D+              +D+  LW+WR+HN VNAR++ D  E  E  K  +P+AE+C  C  A         W+E +VL++L ++YS      +G D
Sbjct:  397 GLWTMFHTLSVNFALKQSKHTSQDPSAVLRAMHGYIGNFFGCADCAAHFVKT--ASENRYLDV------------RREDEAVLWLWRVHNQVNARLSGDDTEDPEHKKLQYPAAENCPACRFA------NGSWNEDEVLRYLKTKYSVDAIKYDGID 533          
BLAST of mRNA_M-pyrifera_M_contig1333.5914.1 vs. uniprot
Match: UPI0005F0C3E0 (sulfhydryl oxidase 1 n=1 Tax=Wasmannia auropunctata TaxID=64793 RepID=UPI0005F0C3E0)

HSP 1 Score: 88.2 bits (217), Expect = 4.050e-14
Identity = 53/162 (32.72%), Postives = 80/162 (49.38%), Query Frame = 1
Query:  679 GLWSLFHALSLSSAPMRQQ----------PYAIMESIHSFVDNFFRCEHCRSHFLEMYGTCENHRCDIPLASNLRGNQLPEGQDKLALWVWRMHNAVNARVALDQDETAEVHKSFWPSAEDCVHCWEAFPPEKDQPPWSEPDVLQFLASRYSCPNAVEEGPD 1134
            GLW++FH L+++ A  R+           P AI+ ++H ++  FF C  C +HF+EM     N   D+              +D+ ALW+WR HN VNAR++ D  E  E  K  +P+AE C  C  A         W+E +VL++L  +YS      +G D
Sbjct:  443 GLWTMFHMLTVNFALERRDRDVTRALSRDPAAILRAMHGYIGTFFGCADCAAHFVEMAD--RNGMFDV------------RSRDEAALWLWRAHNQVNARLSGDNTEDPEHRKIQYPAAEHCPACRHA------NDSWNEEEVLRYLKIKYSYSGIKFDGID 584          
BLAST of mRNA_M-pyrifera_M_contig1333.5914.1 vs. uniprot
Match: A0A835ZH80_9STRA (Sulfhydryl oxidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH80_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 5.810e-13
Identity = 47/112 (41.96%), Postives = 59/112 (52.68%), Query Frame = 1
Query:  622 WRGANMLTGTEAHAN-HLTSGLWSLFHALSLSSAPMRQQPYAIMESIHSFVDNFFRCEHCRSHFLEMYGTCENHRCDIPLASNLRGNQLPEGQDKLALWVWRMHNAVNARVA 954
            W  A   TG + H+  + +SGLWSLFH L+LS A    +      +I +FVD FF C  CR+HFL     C+   C +             G   LALW+WRMHNAVN RVA
Sbjct:    3 WPAAAHETGRDLHSLVNYSSGLWSLFHVLTLSPARGAARAQETQAAIRTFVDRFFGCAPCRAHFLGAVDACDAGACAVSA-----------GPRALALWLWRMHNAVNVRVA 103          
BLAST of mRNA_M-pyrifera_M_contig1333.5914.1 vs. uniprot
Match: A0A7S2RPX9_9STRA (Sulfhydryl oxidase (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RPX9_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 7.230e-13
Identity = 52/161 (32.30%), Postives = 76/161 (47.20%), Query Frame = 1
Query:  691 LFHALSL-SSAPMRQ----------QPYAIMESIHSFVDNFFRCEHCRSHFLEMYGTCENHRCD------IPLASNLRGNQLPEGQDKLALWVWRMHNAVNARVALDQDE-------TAEVHKSFWPSAEDCVHCWEAFPPEKDQPPWSEPDVLQFLASRY 1101
            LFH L++ +S P  Q           P+ + ESI +F+ NFF CE CR HFL+MY  C +  C         L ++   N   EG++ LA+W W +HN VN R+  +          T EV+ + +P+   C  CW     +K+   W   +V  FL   Y
Sbjct:    1 LFHILTIGASFPENQIYGFHKGYVISPHEVAESIRNFIANFFGCEVCRRHFLDMYDNCGHGHCKRLANQATFLKNDFSNNSNEEGRE-LAIWFWEVHNDVNIRLMKENATSHHRNVTTEEVNAAKFPTTNMCHTCWL----DKNMEQWDSNEVYVFLKQWY 156          
BLAST of mRNA_M-pyrifera_M_contig1333.5914.1 vs. uniprot
Match: A0A7S2Q3R2_9DINO (Sulfhydryl oxidase (Fragment) n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2Q3R2_9DINO)

HSP 1 Score: 78.6 bits (192), Expect = 4.340e-12
Identity = 45/133 (33.83%), Postives = 66/133 (49.62%), Query Frame = 1
Query:  673 TSGLWSLFHALSLSSAPMRQQ------------PYAIMESIHSFVDNFFRCEHCRSHFLEMYGTCENHRCDIPLASNLRGNQLPEGQDKLALWVWRMHNAVNARVALDQDETAEVHKSF---WPSAEDCVHCW 1026
            T GLW+LFH +++++A   Q              Y  +  I +FV NFF CE C  HFL+MY +C   RCD+   ++ RG          ALW+W++HN V  RV+ ++    E   +    WP+   C  CW
Sbjct:  117 TCGLWTLFHMVTVAAAQGAQSIVGSDASTSEAAKYDALPKIRNFVANFFGCEDCARHFLDMYDSCGLGRCDLS-PTDARG---------AALWLWQVHNNVTQRVSRERGLAGERGLALPAPWPNRTLCGQCW 239          
BLAST of mRNA_M-pyrifera_M_contig1333.5914.1 vs. uniprot
Match: UPI0005CE21CB (sulfhydryl oxidase 1-like n=1 Tax=Ceratosolen solmsi marchali TaxID=326594 RepID=UPI0005CE21CB)

HSP 1 Score: 80.5 bits (197), Expect = 9.620e-12
Identity = 52/174 (29.89%), Postives = 78/174 (44.83%), Query Frame = 1
Query:  619 NWRGANMLTGTEAHANHLTSGLWSLFHALSLSSAP----MRQQPYAIMESIHSFVDNFFRCEHCRSHFLEMYGTCENHRCDIPLASNLRGNQLPEGQDKLALWVWRMHNAVNARVALDQDETAEVHKSFWPSAEDCVHCWEAFPPEKDQPPWSEPDVLQFLASRYSCPNAVEEG 1128
            NW G     G+  +      GLW+LFH L+ ++A     +      +++ IH +V NFF C  C +HF +M              S  R      G ++  LW+W+ HN VN R+  D  E  E  K  +PS E+C  C      +     W E +VL++L  +YS  N   +G
Sbjct:  415 NWIGCK---GSTPNFRGYPCGLWTLFHTLTTAAAEEIDDVHNNNLPVLQVIHGYVQNFFGCTDCVTHFQDM--------------SKKRKLFEVHGGNESILWLWKAHNEVNERLTGDTTEDPEHKKIQYPSVENCPKC------KLSNDKWDENEVLKYLKIKYSKTNIDFQG 565          
BLAST of mRNA_M-pyrifera_M_contig1333.5914.1 vs. uniprot
Match: A0A2K1IWB4_PHYPA (Sulfhydryl oxidase n=4 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1IWB4_PHYPA)

HSP 1 Score: 79.3 bits (194), Expect = 1.430e-11
Identity = 98/394 (24.87%), Postives = 156/394 (39.59%), Query Frame = 1
Query:    1 WERVGATIRGP--IHVGAI-----NCIEH--RDLCHSFKVHSYPSLVGVNWPGAPEGTPEEPAINMFKFGSHSFKDTMANIE---TAFPGLLKVDELTQGVEEGNLGLAMKAGRKGDAVWRTRPVPCELLLEDAAVSVQWVLRYDVFTQGLRLTDKRMGALLSFLDLLATTLPGKFNR-------LSFRNLSNELRNDPGLNDIGRWDKRVENFQVGSFELNEEPNWRGANMLTGTEAHANHLTSGLWSLFHALSLSSAPMRQQPYAIMESIHSFVDNFFRCEHCRSHFLEM----YGTCENHRCDIPLASNLRGNQLPEGQDKLALWVWRMHNAVNARVALDQ----DETAEVHKSFWPSAEDCVHCWEAFPPEKDQPPWSEPDVLQFLASRY 1101
            +ERV     GP  +H G I     +C  +  +DLC  FKV  YP+L+   W   P              G    KD +  +E    A      ++ + + V +      + A    D       V     + D   +     +  +  + L L +K  G L  FL LL    P K  R       ++F +L +E   DP +  + ++ +        ++ ++   + RG N              GLW LFH+LS+  +   + P A + ++  FVD FFRC+ CR HFLEM     GT +  R                    L +W+W  HN VN R+A ++     E  +  ++ WP+   C  C       ++ P W+E  V +FL + Y
Sbjct:   85 YERVARLFNGPNAVHAGEIYLARVDCANNVNQDLCTRFKVEYYPTLL---WASPPT----------LARGDRVSKDKVEGLEEVKNAHSAERLLEWINKRVSKTYSLSDVTAEGGADRALVREVVQIVASIHDTEEATAAAFKIILDEKLLNLDNK--GDLAQFLQLLVLHHPSKRCRKGSADLLVNFDDLWSE--GDPSMEVLSKY-RICGKSSPSNYWVSCRGDNRGYNC-------------GLWLLFHSLSVRVSDS-ESPGAFV-ALRGFVDQFFRCQVCREHFLEMSSSAMGTIKTRR-------------------DLVMWLWNAHNEVNKRLANEELKSRKEDLQAPRTVWPTNHLCSDC--ILGTNREDPLWNEDVVYKFLKNWY 424          
BLAST of mRNA_M-pyrifera_M_contig1333.5914.1 vs. uniprot
Match: A0A090KY77_STRRB (Sulfhydryl oxidase n=1 Tax=Strongyloides ratti TaxID=34506 RepID=A0A090KY77_STRRB)

HSP 1 Score: 79.0 bits (193), Expect = 2.580e-11
Identity = 70/282 (24.82%), Postives = 119/282 (42.20%), Query Frame = 1
Query:  361 DAAVSVQWVLRYDVFTQGLRLTDKRMGALLSFLDLLATTLPGK-----------------------FNR---LSFRNLSNELRNDPGLNDIGRWDKRVENFQVGSFELNEEPNWRGANMLTGTEAHANHLTSGLWSLFHALSLSS---APMRQQ--PYAIMESIHSFVDNFFRCEHCRSHFLEMYGT---CENHRCDIPLASNLRGNQLPEGQDKLALWVWRMHNAVNARVALDQDETAEVHKSFWPSAEDCVHCWEAFPPEKDQPPWSEPDVLQFLASRYS 1104
            D   ++++ L  ++   G  LT   + AL +F+++L    PG                        FN    L+ + + N L  D  +N+  +++++ +N         ++ +W       GTE      T GLW+LFH +++S+   AP+     P  I+ SI  +V+ FF CE+C+ HF+EM G     E+H                + ++   L++W+ HN VN R+     E     K  +P+   C  C E F    +      P   +FL S YS
Sbjct:  318 DMLKAIKYALTNEIELVGQNLTGNSLTALYNFVNMLNDYYPGYTKNGSDNTSVKILENSSKAKQIFFNLKQFLTIKMMENSLTLDDWVNEFKKYEQKFDN------PFADDADWEHCK---GTEPRYRGYTCGLWTLFHTITVSAYNDAPVNGDFDPIPIIYSIRGWVEEFFGCEYCKKHFIEMTGRKFKIEDHM---------------KTKEDTYLYLWKAHNIVNNRIKGHDSEDPNFKKYQFPAKFLCKECNEDFESLDN------PKTHKFLQSYYS 569          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1333.5914.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G5C1_ECTSI9.960e-14952.42Sulfhydryl oxidase n=1 Tax=Ectocarpus siliculosus ... [more]
A0A7S2WSV1_9STRA1.140e-3029.71Sulfhydryl oxidase (Fragment) n=1 Tax=Rhizochromul... [more]
A0A3L8E373_OOCBI1.710e-1533.12Sulfhydryl oxidase (Fragment) n=3 Tax=Ooceraea bir... [more]
UPI0005F0C3E04.050e-1432.72sulfhydryl oxidase 1 n=1 Tax=Wasmannia auropunctat... [more]
A0A835ZH80_9STRA5.810e-1341.96Sulfhydryl oxidase n=1 Tax=Tribonema minus TaxID=3... [more]
A0A7S2RPX9_9STRA7.230e-1332.30Sulfhydryl oxidase (Fragment) n=1 Tax=Eucampia ant... [more]
A0A7S2Q3R2_9DINO4.340e-1233.83Sulfhydryl oxidase (Fragment) n=1 Tax=Brandtodiniu... [more]
UPI0005CE21CB9.620e-1229.89sulfhydryl oxidase 1-like n=1 Tax=Ceratosolen solm... [more]
A0A2K1IWB4_PHYPA1.430e-1124.87Sulfhydryl oxidase n=4 Tax=Physcomitrium patens Ta... [more]
A0A090KY77_STRRB2.580e-1124.82Sulfhydryl oxidase n=1 Tax=Strongyloides ratti Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig1333contigM-pyrifera_M_contig1333:6639..13754 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score394.8
Seed ortholog evalue4.4e-107
Seed eggNOG ortholog2880.D7G5C1
Preferred nameQSOX
KEGG koko:K10758
Hectar predicted targeting categoryother localisation
EggNOG free text desc.thiol oxidase activity
EggNOG OGsKOG1731@1,KOG1731@2759
Ec32 ortholog descriptionERV/ALR sulfhydryl oxidase domain
Ec32 orthologEc-14_006970.1
EC1.8.3.2
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Exons5
Model size3066
Cds size1113
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815813.716349-UTR-M-pyrifera_M_contig1333:6638..68061622815813.716349-UTR-M-pyrifera_M_contig1333:6638..6806Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig1333 6639..6806 +
1692277583.4567885-UTR-M-pyrifera_M_contig1333:6638..68061692277583.4567885-UTR-M-pyrifera_M_contig1333:6638..6806Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig1333 6639..6806 +
1622815813.789614-UTR-M-pyrifera_M_contig1333:11969..137541622815813.789614-UTR-M-pyrifera_M_contig1333:11969..13754Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig1333 11970..13754 +
1692277583.5265057-UTR-M-pyrifera_M_contig1333:11969..137541692277583.5265057-UTR-M-pyrifera_M_contig1333:11969..13754Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig1333 11970..13754 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815813.7292945-CDS-M-pyrifera_M_contig1333:6806..70771622815813.7292945-CDS-M-pyrifera_M_contig1333:6806..7077Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1333 6807..7077 +
1692277583.4689982-CDS-M-pyrifera_M_contig1333:6806..70771692277583.4689982-CDS-M-pyrifera_M_contig1333:6806..7077Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1333 6807..7077 +
1622815813.7386959-CDS-M-pyrifera_M_contig1333:9423..95441622815813.7386959-CDS-M-pyrifera_M_contig1333:9423..9544Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1333 9424..9544 +
1692277583.4786582-CDS-M-pyrifera_M_contig1333:9423..95441692277583.4786582-CDS-M-pyrifera_M_contig1333:9423..9544Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1333 9424..9544 +
1622815813.7485216-CDS-M-pyrifera_M_contig1333:9775..100001622815813.7485216-CDS-M-pyrifera_M_contig1333:9775..10000Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1333 9776..10000 +
1692277583.489128-CDS-M-pyrifera_M_contig1333:9775..100001692277583.489128-CDS-M-pyrifera_M_contig1333:9775..10000Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1333 9776..10000 +
1622815813.7621264-CDS-M-pyrifera_M_contig1333:10545..107461622815813.7621264-CDS-M-pyrifera_M_contig1333:10545..10746Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1333 10546..10746 +
1692277583.5037131-CDS-M-pyrifera_M_contig1333:10545..107461692277583.5037131-CDS-M-pyrifera_M_contig1333:10545..10746Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1333 10546..10746 +
1622815813.7759624-CDS-M-pyrifera_M_contig1333:11674..119691622815813.7759624-CDS-M-pyrifera_M_contig1333:11674..11969Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1333 11675..11969 +
1692277583.5164285-CDS-M-pyrifera_M_contig1333:11674..119691692277583.5164285-CDS-M-pyrifera_M_contig1333:11674..11969Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1333 11675..11969 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig1333.5914.1prot_M-pyrifera_M_contig1333.5914.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig1333 6807..11969 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig1333.5914.1

>prot_M-pyrifera_M_contig1333.5914.1 ID=prot_M-pyrifera_M_contig1333.5914.1|Name=mRNA_M-pyrifera_M_contig1333.5914.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=371bp
MFKFGSHSFKDTMANIETAFPGLLKVDELTQGVEEGNLGLAMKAGRKGDA
VWRTRPVPCELLLEDAAVSVQWVLRYDVFTQGLRLTDKRMGALLSFLDLL
ATTLPGKFNRLSFRNLSNELRNDPGLNDIGRWDKRVENFQVGSFELNEEP
NWRGANMLTGTEAHANHLTSGLWSLFHALSLSSAPMRQQPYAIMESIHSF
VDNFFRCEHCRSHFLEMYGTCENHRCDIPLASNLRGNQLPEGQDKLALWV
WRMHNAVNARVALDQDETAEVHKSFWPSAEDCVHCWEAFPPEKDQPPWSE
PDVLQFLASRYSCPNAVEEGPDLSGSSWAVKCVAVLAAVSLLMWARRKLG
KWGVGLSKKRCDTLPSMPLA*
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mRNA from alignment at M-pyrifera_M_contig1333:6639..13754+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig1333.5914.1 ID=mRNA_M-pyrifera_M_contig1333.5914.1|Name=mRNA_M-pyrifera_M_contig1333.5914.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=7116bp|location=Sequence derived from alignment at M-pyrifera_M_contig1333:6639..13754+ (Macrocystis pyrifera P11B4 male)
TGGGAGCGCGTCGGCGCCACCATTCGAGGCCCCATCCATGTGGGTGCTAT AAATTGTATCGAGCACCGCGACCTCTGTCACTCCTTTAAAGTGCATAGCT ATCCTTCTCTTGTGGGAGTCAACTGGCCGGGCGCACCGGAAGGCACACCC GAAGAGCCTGCTATTAACATGTTCAAGTTTGGGTCCCACTCCTTCAAGGA CACCATGGCCAACATAGAAACGGCATTTCCCGGTTTGCTCAAGGTTGACG AACTGACGCAAGGCGTAGAGGAAGGGAACCTCGGTCTCGCCATGAAAGCA GGAAGAAAAGGAGATGCGGTCTGGCGAACGCGGCCGGTGCCGTGCGAGCT CCTACTGGAAGACGCGGCGGTGAGCGTGCAATGGGTATTGAGGTACGACG TCTTCACGCAGGGGCTGCGACTGACCGACAAACGGATGGGTGAGTGCGGG AGTGCGTGAGTGCGTGCGCGGCGCATGATGCTCGTTGCTGGAGGCAAGGT GCGAGGAAGTGATCGCCTCTTGGTATGAGACTGGTAGCAATCTATATATC ATGAGAAATATTTTGCGATTGGTTTGAGCCGTACAGGCAGTAGCAGGAGT TATTAATGTTGGCTGCTGTGCGCGAACTACGTTGCACCACGTGTGCAAAT GCAGCAGGCTTTGCTCCATAAGATCGAACCGAATGCTTGTGTTTTTTTGT ACCTACAACCTACACGTAAGAGCAACGACCGCTCCGGGGTAAACGTTGAG GAGTATTTGTTTGTGGCTGCGCTATGAAAAACCGTGCCGTGCCCGGCCTC ACTGTTTGTTGGGAGTGGGAATGGGTTCGTTTTAGTACGTAAAAAAGAAA CAAATAATGTCGGTCGGTCGTTATCTGGGGAAAAAAAACTTTCGGAAATT AACCAATCCATGATTGGGAAAAAAAAAACTTCGCCGCCAAAAAATCCGTT CGATGATGCTGCCTCTCGAAAATAAAATAAAAAGCAGTGCCGGCATCGAC GTTGTGGCGTTGAGCTATGTATGTGCTGAAAAAAAGTCAGCCTTGCTTTT TGCACGAAACGTGCTGCAGGACAGCGCACAACCAAGCCCAGAGCGTAGAG CAGCAGCGTAGACACGGACGCGCGAGCGTGAACGAATCGCACGTTCCTGG CGGGGGCTTGGGATTGGTGACCGGCAACACGAGAATGCTGCCCCCCCTGT GAAAAACATGCTGTACAGATCAAGTCGTAGTATGTGGTCCTGGTTTACTG CTGTTGGGCACGTGTAAACAAATAAGAACATACCCACACACAGCATCGAC AATCGGCTGCGTGTTGCTATACTGCACCTCGCCGAGACCGAGATTTCGAC GGCGCTGCCTGCACCTCCGTGGAAGCGCGCCCCACCTCCAGCTCACGGGC AAAAGTTGTTGCTGTGCGTGCGGCTAGGTTTGAGCCTTGCGGCTGAGGCT GCGTTCACCACGCGCCTGAAATCTGCATGATGCTGCTTATGTACTCGTAG GTACCTATTAATATTGTACCACTCTTTCCGGAAATGTAAGGAACCGTTTA TTCATATTTAAAATTGAACCGTTCTTATATTTCCGGACAGGGTGGTACGA TAGAGAATGTTTACTCGATCATTTTCTCACGTGAGACAACAATAGTGATG CGTTCGCATCTGAACGCTAGAGGTAACTCGCTTCCCGCTGCATCAAGGGC CGATCACAGATGATCTTCGCTGCGCCGATGACGCCGGGTGTGATGGCAAT CGCTCGGCGTGCGGCCGCGTTGATGTCTGGCACTGTTTGCCCGATGCAAT GAAGACTGGACGTCTTTTTTTATCTTTGGGGATGCTTTTTGTCGGATTTC CCATCAACAGTTGACTCATCAAAAGAGAGTCAACTCCTGTACCAAATTTC TTGTCGGCTTCTTGGAGGATTCAGGCGCGTATTCCTGTGTGCGCAAAGTC ACTCCGCATTTGGTGATTGGTTTAGATTTTCTAGGAGTGTCCTATAAATC TTCCCTAGACAGAAAGATACGAATACAACCTAAAAAACCGAGTTCTCCCG CATATTTCCACAAAAATAGACAGGGGAAAAATGTGCAGATCTAAACACAC CCTGTCACCGGATCATTCTCCATTGATGGCAGGTGTCTGACGAACGCTAT CCTCCAATTCGTTTCCTGTGTGAAGAAATCAGGTATTCGGTGCTACACGT GAATTTAGTCTAAAACCAAGTAAATAGGGTGGTGGCCGACTATTTAAAAA AATTCTTCTTTCGATTTTTTTTTGACGGATTCTCGAATAGACTGAACTTT TTTTCACGTCTAAAACGAATCCATTCCCATGCCTAACTGCTCTGTGTTGG GGTTTAGTGGCGTTTACATTGTTGATCCATTGAATACGTCTTTTTCGCTT TTCTTCCTACCACATGGACGAATCCACTGCAGTACGAGTACTACAGATCC CTACTCGCCCCTGTGTTTTTTAATACACCAATAGTACTGCTGTACTGCTG TACTTATTGGGATATATTTTAGGGCGGTGTAAATGCGTGCACCATACATA GGAGGCAAGAGCATAGCCGACAAGGCGCCGAATCCTCACGTTTTATTAAT AGATTGGCAGCGACCGGTACTGCCCAGTAGTATAATCGGCATGCAACACA CAATGCTTGATTACCGGTACGTGCCAATCGAAACCAAAACCACCTTCGGC AACCTCCTTAATGGTGCATTGGTGCATGTTGCCTCTCTCCTCTGCGGCTA TCATTGCTTGTGACTTGTCTGGGTTGCGTCTCCAGGCGCGCTTCTATCGT TCCTCGACCTCCTGGCCACTACCCTACCGGGCAAGTTCAACCGTCTCAGC TTCCGCAACCTCTCGAACGAGCTGAGGAATGATCCCGGTTTAAACGACAT AGGCAGGTGAACGGTTAGAGTCGGAGCTGCTGGTGAAATCTACCTGGTAC CATGCACCATGCGGTCTTTATGTGCATTTCTGGCAGGCCAAACCCTGGCA GGCGTGTTTCACCCAGTTGGCGTTGCTTAGTCGATTCTACTTCTTGTATG CACGACGTATTCTGATTGAAACACAATGCTCAGTGTTTGATTGTTTGACA CGCTTTTTTAAGACCGCCAACGTGACCTCTCTTCCAGGTGGGACAAACGA GTAGAAAATTTCCAAGTCGGCTCGTTTGAGCTGAATGAGGAACCTAACTG GCGAGGAGCCAACATGCTGACGGGTACGGAAGCCCACGCCAACCATTTGA CCTCAGGGCTGTGGTCTCTATTTCATGCGTTGTCCCTCTCCTCGGCGCCT ATGAGGCAACAGCCCTATGCCATCATGGAGAGCATTCACTCCTTCGTTGA TAACTTTTTCAGGTGATGCGCTGTGCCATGGATAACTGTTTTACTTTTTT TACCACGGGCTACAATTCAGGGAAATCACCTGTTAATAGGGCGAGAACAC ACTTTTCTGGTTGGGTGATGCCCGTGTGCTTTGTGTGCGTACTTTATATG CGATTTGTTTGGTATGTGTGTAGTATAAACAATGTCATATCCCGAGAACA GCATCGGCAATTAGCGGTGGTATCATGCCAGGTATATAAATACAACCGTC TCCGTTTTCCCACTGAACGTTGATCTTCCCCTACAATACCCGGAGGCGTT CGTGACAGACCGATACCGCTGTATACGGTGGCAACGTGACCACCCTAACT GAACGACGGAAAAGCAATTTTCAACACCAGTTGTATCCAGTAAGCGCTCC CTTGTGCCGAATGAAGCCGTTACGAGCAACGACCGACCTGCCGTATGCTT TGGTTTTTTGTGGACTGTCACAAGGTGTAACGCACCCTCCCCGCTCCCTC CTGCTCTGCTCCCGCTTCTTCTGGTGCCCTCGCTTGAGTACATTGTGTAT GTCCCAGGTGCGAGCACTGTCGCAGCCACTTTCTTGAAATGTACGGAACG TGCGAAAATCACCGGTGTGACATCCCCTTGGCAAGCAACTTAAGAGGCAA TCAGTTACCGGAAGGACAAGACAAGCTAGCGCTCTGGGTATGGCGGATGC ACAACGCCGTAAACGCTCGCGTAGCCCTAGACCAGGACGAAACGGCGGAA GTGCACAAGTGAGATTAGTCTTTAACTACATTGTGCATGTGTTTTACTGC TGCAAGTAGTATGCTACTTGCTACACTGGTTCCAAGTATTTTGTCCTCAA AAACGTTACTGCAGTTCGAAATGGTTTTGACGGCAGAGAGAGGAGTCATT ACTGGGAACGTTGGCTGATACTTGGGCTCATCGACCGCGCATCTTCGTTT GCTTGGCCCTCCTTTGCTTTGATTGGCTGCAGCCGTCTATTATTTTTAGA CGAATAGCCGTGAACCCTGGCTGTTACCCCGAATCTTCTGAGTAGTAAGA CGTGCAGGGCCGCAGTATCGACCAAACATGTCAACGCTTTGGCACCAGGT GCGTGAGAGGGGGGCGTCATGTACCACGATACATGATGTATACGATACGA TAGTGGCTGGCTGGCTGGTGTACGATAGTGTCCGCTTAATGTTAAGGGGA CAGGTTTTCCGTTTGAGTTGTGCGTATCCCGATTTATTCGGCTGACACGT AGCAAAGTACCTGTTGCTCCCACGTGCTCTAGGAGATGTTACGTTGCATG TAGCTGTGGAGCTCTCTCTTTGCCCGGCCGATGCCGTTTCGAGCTTGGCT ATACTTCGTCGCCGTCACCTCTCGAGCAAATCAACAAAAGACACATTTTG TGTTTTTCCATCGACACTTGTTTTTAGTACACCGAGGACGTAGGCGCGAC TACAGTAGTATTCCTTCCATGAGGGCGTCCACAAGGGAAGGCTGAATAGA CAACCTAAAGTGCGCTGAAGCTCGACAGGCACACAGATCGATCTAATAGG CGAGGCAAGCATTCGATGTGTTGCCCACGTTTAGAAGGTGTGATGGACCC CCACCCCCCTGCAAATACCACAGTGAGTTACTGTAGTGGCTATATGCTGT GCCGTGCTGCCCGCCCTACTTTACTGCCTCCCGCAGGAGCTTTTGGCCTA GTGCTGAAGATTGCGTGCACTGCTGGGAGGCCTTCCCCCCAGAAAAAGAT CAGCCTCCGTGGAGCGAGCCAGATGTGCTCCAGTTTCTGGCCTCAAGGTA TTCGTGTCCCAATGCGGTCGAAGAGGGGCCAGATTTGTCGGGGAGCAGCT GGGCCGTGAAGTGCGTGGCGGTGCTTGCAGCGGTGTCCTTGCTCATGTGG GCCCGAAGAAAGCTGGGCAAGTGGGGGGTGGGGCTATCCAAGAAGCGGTG TGACACCTTGCCCAGTATGCCACTTGCTTAGCGTGCGCAGGTACCAGGTA TCATTTGCTAGCTCGCATGTTGCGGTTTGAAAGACGGCTTTCCCTGAAGA CAGCTTCTTGACTTGGCAAGGAGGTGCTGGATGTTTTGCTTCAGTGAAGA GAGCCGCGACCAGACAAGCGTGGTCTTCATGACTGTCGACTTGCGTGAAC GGCGTCAGGGAATCATCCGCGCTCGCTGGTCGATAGCAGACCGTGCTGTG ATGCCTGTGCATGGCGCTTCGAGCAGTCGGGATGTTTAGAGCATCCCAAT CGAGGGCTTGCTTTCTGAAAGGGGAGGGTGGTCCTACTCCAGTAGTACTC CAAATTACCTTGCACCTGCTCGCCCTCGAAGATACGAGCAAGGGAGATTG GGGTGAGTTGATGCTAGTTTCCTGAAAGTGAAGGTGGCTTTCGGTGGCTC AGCGTCAAAGGCACGGCCAAGGGGGGAGTGTCCTGGTGCGTTCTTGGCTT CATCTTGGGGTTTTGTCTATATACCAGGTACCACGTTTTTTGGCGTCACT CTTTTTTCTTCAGTACTGTTTTGGACGTTTCAAGATTTTTTTGTGTGTCG CCCTTCTCATACTGACTGCATACAGGCAACAATAAAGCCCAGTCGATGGA TCGTGTTGACGTTGTAACTATGTTATAGTATTTGCGTGTTGTGGGTGTTT CTTTCTTTGGTGGGATGTTTGGTATTTGGCGATGCCAACGTGGGAGCAGT AGGCAAGTAGGCTCGCTATCATACCGGATGCCGCGTATCACTGTGCGTGC TCCAGTTTGTATTCGTGTGTGAAGGGTGTTCAGATCATTTCACGTTTTTG TTTTTGTAAGTGCACGTTTGTTTTTAGTCGGTGAGGTGTCTCCGCTTGTT TCCCTTGGCATTCAAAAAGAGACCCTTGTTTTTTTATGTAGAAGGCAGTC TGTCCTCCGGTATACCAGGTAGATTTTTATTTTCCGCATGGCACCGGTCG CCCCGGTGGCTCGGTGTTACCCTCGAATGCTGGTAGAGTTGAATGTTTGA GTTCAAATCCCACCGTGGTGAAAAAAATCTTTATTTTCAAAAATATAAGA AAATAATCAACTGCCGAGAGCGCGTAGCGGTCGGCGAAATTCGAGCGAGT CGACGAAAGAATGAATGAGTGAAGCCTCCTCTCGCCATAAAAATGGACGC ACGAATTGTAGTGGGAGGGGGGAGGAGAGAGCCTGCACTATGTGACCTAA TGGTTGATCTTGAGACCGACTAGGAGGGAGATGAAATAAAGGCGAAGCTA GTGAAAAGAGGAAGGAAAAAATGTGTTATCCATACATAGTAACGGGTACC AGGTCTGATCTGCATGATGAAATGTCGTCTCCCCTCGTCCCACTGCAAAA AGTGTCCTCTCCAATGCCATGTATTTTGTTTACTAAACGGGTGCAGTCAG AAATGGGTGGACATATCCTGGGGAAACCGCTTAACCATCGAGTGCCGTAG AATATACCGTACCAAGGCGTAGACACGCGGAATTGAGTCAAATCGTTCAA CTATGTCGTTTCCTGGCAGTGACACGCGGACTTGAGTCAAAATCGTTGGA CAATGTCAAGGGGCGCTATTAATCGTAGAGCAGGGCAAGGGTTGCCCTGC TGTTCTCTAGGTGTTACCCTTAATACAAGGTTGGACGGAGGTATGGAAAT TTTCGGGGGTTGGTCGGGCTTAGGCAAGCGGCCAAAAAGCAGACTCTATA CGTTCGCAAAGACGTCGGCCAGAAACATGTGTATTAGGGGTGGGAGCGAA AAAAAGCAGCAGCGAT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig1333:6639..13754+

>mRNA_M-pyrifera_M_contig1333.5914.1 ID=mRNA_M-pyrifera_M_contig1333.5914.1|Name=mRNA_M-pyrifera_M_contig1333.5914.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2226bp|location=Sequence derived from alignment at M-pyrifera_M_contig1333:6639..13754+ (Macrocystis pyrifera P11B4 male)
ATGTTCAAGTTTGGGTCCCACTCCTTCAAGGACACCATGGCCAACATAGA
AACGGCATTTCCCGGTTTGCTCAAGGTTGACGAACTGACGCAAGGCGTAG
AGGAAGGGAACCTCGGTCTCGCCATGAAAGCAGGAAGAAAAGGAGATGCG
GTCTGGCGAACGCGGCCGGTGCCGTGCGAGCTCCTACTGGAAGACGCGGC
GGTGAGCGTGCAATGGGTATTGAGGTACGACGTCTTCACGCAGGGGCTGC
GACTGACCGACAAACGGATGGATGTTCAAGTTTGGGTCCCACTCCTTCAA
GGACACCATGGCCAACATAGAAACGGCATTTCCCGGTTTGCTCAAGGTTG
ACGAACTGACGCAAGGCGTAGAGGAAGGGAACCTCGGTCTCGCCATGAAA
GCAGGAAGAAAAGGAGATGCGGTCTGGCGAACGCGGCCGGTGCCGTGCGA
GCTCCTACTGGAAGACGCGGCGGTGAGCGTGCAATGGGTATTGAGGTACG
ACGTCTTCACGCAGGGGCTGCGACTGACCGACAAACGGATGGGCGCGCTT
CTATCGTTCCTCGACCTCCTGGCCACTACCCTACCGGGCAAGTTCAACCG
TCTCAGCTTCCGCAACCTCTCGAACGAGCTGAGGAATGATCCCGGTTTAA
ACGACATAGGCAGGCGCGCTTCTATCGTTCCTCGACCTCCTGGCCACTAC
CCTACCGGGCAAGTTCAACCGTCTCAGCTTCCGCAACCTCTCGAACGAGC
TGAGGAATGATCCCGGTTTAAACGACATAGGCAGGTGGGACAAACGAGTA
GAAAATTTCCAAGTCGGCTCGTTTGAGCTGAATGAGGAACCTAACTGGCG
AGGAGCCAACATGCTGACGGGTACGGAAGCCCACGCCAACCATTTGACCT
CAGGGCTGTGGTCTCTATTTCATGCGTTGTCCCTCTCCTCGGCGCCTATG
AGGCAACAGCCCTATGCCATCATGGAGAGCATTCACTCCTTCGTTGATAA
CTTTTTCAGGTGGGACAAACGAGTAGAAAATTTCCAAGTCGGCTCGTTTG
AGCTGAATGAGGAACCTAACTGGCGAGGAGCCAACATGCTGACGGGTACG
GAAGCCCACGCCAACCATTTGACCTCAGGGCTGTGGTCTCTATTTCATGC
GTTGTCCCTCTCCTCGGCGCCTATGAGGCAACAGCCCTATGCCATCATGG
AGAGCATTCACTCCTTCGTTGATAACTTTTTCAGGTGCGAGCACTGTCGC
AGCCACTTTCTTGAAATGTACGGAACGTGCGAAAATCACCGGTGTGACAT
CCCCTTGGCAAGCAACTTAAGAGGCAATCAGTTACCGGAAGGACAAGACA
AGCTAGCGCTCTGGGTATGGCGGATGCACAACGCCGTAAACGCTCGCGTA
GCCCTAGACCAGGACGAAACGGCGGAAGTGCACAAGTGCGAGCACTGTCG
CAGCCACTTTCTTGAAATGTACGGAACGTGCGAAAATCACCGGTGTGACA
TCCCCTTGGCAAGCAACTTAAGAGGCAATCAGTTACCGGAAGGACAAGAC
AAGCTAGCGCTCTGGGTATGGCGGATGCACAACGCCGTAAACGCTCGCGT
AGCCCTAGACCAGGACGAAACGGCGGAAGTGCACAAGAGCTTTTGGCCTA
GTGCTGAAGATTGCGTGCACTGCTGGGAGGCCTTCCCCCCAGAAAAAGAT
CAGCCTCCGTGGAGCGAGCCAGATGTGCTCCAGTTTCTGGCCTCAAGGTA
TTCGTGTCCCAATGCGGTCGAAGAGGGGCCAGATTTGTCGGGGAGCAGCT
GGGCCGTGAAGTGCGTGGCGGTGCTTGCAGCGGTGTCCTTGCTCATGTGG
GCCCGAAGAAAGCTGGGCAAGTGGGGGGTGGGGCTATCCAAGAAGCGGTG
TGACACCTTGCCCAGTATGCCACTTGCTTAGGAGCTTTTGGCCTAGTGCT
GAAGATTGCGTGCACTGCTGGGAGGCCTTCCCCCCAGAAAAAGATCAGCC
TCCGTGGAGCGAGCCAGATGTGCTCCAGTTTCTGGCCTCAAGGTATTCGT
GTCCCAATGCGGTCGAAGAGGGGCCAGATTTGTCGGGGAGCAGCTGGGCC
GTGAAGTGCGTGGCGGTGCTTGCAGCGGTGTCCTTGCTCATGTGGGCCCG
AAGAAAGCTGGGCAAGTGGGGGGTGGGGCTATCCAAGAAGCGGTGTGACA
CCTTGCCCAGTATGCCACTTGCTTAG
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