mRNA_M-pyrifera_M_contig13310.5909.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig13310.5909.1 vs. uniprot
Match: D7FIE9_ECTSI (Peptide-methionine (R)-S-oxide reductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIE9_ECTSI) HSP 1 Score: 228 bits (581), Expect = 2.370e-67 Identity = 100/148 (67.57%), Postives = 122/148 (82.43%), Query Frame = 1
Query: 346 QEKKLNMMQRYVVGGGTEPPFTGRYSNGFKYNTKQRGTYNCAVCGLPAYSSQHKFESGTGWPSFYKTIDPAHVWETTDITHGMVRKEVVCVRCHAHQGHVFSDGPRPTGLRYCVNAAALSFEPTSGEGEDSKCRLGAHFIQSISKRLR 789
+E+ L++ QRYVV GGTEPPF+GR+SNG +Y+TK+RGT+NCAVC LPAYSS KF SGTGWPSFY+TIDP HVWETTD++ GMVRKEV C RCHAHQGHVF+DGPRPTG RYCVNAA+L+F+ GEG+ + A F+ +S+ LR
Sbjct: 38 RERALSIKQRYVVSGGTEPPFSGRFSNGVRYSTKRRGTFNCAVCDLPAYSSSSKFNSGTGWPSFYETIDPDHVWETTDLSAGMVRKEVKCARCHAHQGHVFNDGPRPTGKRYCVNAASLTFKAAHGEGQVPSHGIAAGFVDMLSRHLR 185
BLAST of mRNA_M-pyrifera_M_contig13310.5909.1 vs. uniprot
Match: A0A6H5JXE9_9PHAE (Peptide-methionine (R)-S-oxide reductase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXE9_9PHAE) HSP 1 Score: 218 bits (556), Expect = 1.100e-63 Identity = 100/166 (60.24%), Postives = 128/166 (77.11%), Query Frame = 1
Query: 310 YDFCNSHLTTSR--QEKKLNMMQRYVVGGGTEPPFTGRYSNGFKYNTKQRGTYNCAVCGLPAYSSQHKFESGTGWPSFYKTIDPAHVWETTDITHGMVRKEVVCVRCHAHQGHVFSDGPRPTGLRYCVNAAALSFEPTSGEGEDSKCRLGAHFIQSISKRLRRKKK 801
YD +T++ +E+ L++ QRYVV GGTEPPF+GR+SNG +Y+TK+RGT++CAVC LPAYSS KF SGTGWPSFY+T+DP HVWETTD++ GMVRKEV C RCHAHQGHVF+DGPRPTG RYCVNAA+L+F+ + +D G F+ +S+ LR + K
Sbjct: 23 YDVTRRKKSTAQLARERSLSVKQRYVVSGGTEPPFSGRFSNGVRYSTKRRGTFDCAVCDLPAYSSSSKFNSGTGWPSFYETVDPDHVWETTDLSAGMVRKEVKCARCHAHQGHVFNDGPRPTGKRYCVNAASLTFK--AAHAQDRVPSGGIGFVDMLSRHLRMRTK 186
BLAST of mRNA_M-pyrifera_M_contig13310.5909.1 vs. uniprot
Match: A0A3B9P772_9CHLR (Peptide methionine sulfoxide reductase MsrB n=1 Tax=Anaerolineaceae bacterium TaxID=2024896 RepID=A0A3B9P772_9CHLR) HSP 1 Score: 151 bits (381), Expect = 1.610e-39 Identity = 71/134 (52.99%), Postives = 87/134 (64.93%), Query Frame = 1
Query: 328 HLTTSRQEKKLNMMQRYVVGG-GTEPPFTGRYSNGFKYNTKQRGTYNCAVCGLPAYSSQHKFESGTGWPSFYKTIDPAHVWETTDITHGMVRKEVVCVRCHAHQGHVFSDGPRPTGLRYCVNAAALSFEPTSGE 726
H T + +L Q V GTEPPF G + Y+ KQ GTY+C C LP +SS+HKF SGTGWPSF+K ID AH+ D + GM R E+ C RC+AH GHVF DGP+PTGLRYC+N+ AL+F P GE
Sbjct: 6 HKTDAEWRAQLTREQYEVTRRKGTEPPFCGMF-----YDNKQAGTYHCICCDLPIFSSEHKFTSGTGWPSFFKPIDEAHIEYHQDSSFGMRRTEIACARCNAHLGHVFRDGPKPTGLRYCINSVALTFVPKDGE 134
BLAST of mRNA_M-pyrifera_M_contig13310.5909.1 vs. uniprot
Match: A0A7C4UVE5_9BACT (Peptide methionine sulfoxide reductase MsrB n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7C4UVE5_9BACT) HSP 1 Score: 148 bits (373), Expect = 1.480e-38 Identity = 69/117 (58.97%), Postives = 84/117 (71.79%), Query Frame = 1
Query: 388 GGTEPPFTGRYSNGFKYNTKQRGTYNCAVCGLPAYSSQHKFESGTGWPSFYKTIDPAHVWETTDITHGMVRKEVVCVRCHAHQGHVFSDGPRPTGLRYCVNAAALSFEPTSGEGEDS 738
GGTEPPFTG+Y +N K+ GTY CA CG P +SS+HKF+SGTGWPSF+ ID V E D++HGMVR EV+C +C H GHVF DGP PT LRYC+N+A+L F EGE+S
Sbjct: 15 GGTEPPFTGKY-----WNHKEPGTYICAGCGNPLFSSKHKFDSGTGWPSFWAPIDSNAVEERLDVSHGMVRTEVICTKCKGHLGHVFKDGPPPTYLRYCINSASLDFIK---EGEES 123
BLAST of mRNA_M-pyrifera_M_contig13310.5909.1 vs. uniprot
Match: A0A1A7RB38_9GAMM (Peptide methionine sulfoxide reductase MsrB n=10 Tax=Acinetobacter TaxID=469 RepID=A0A1A7RB38_9GAMM) HSP 1 Score: 147 bits (372), Expect = 3.360e-38 Identity = 66/116 (56.90%), Postives = 82/116 (70.69%), Query Frame = 1
Query: 391 GTEPPFTGRYSNGFKYNTKQRGTYNCAVCGLPAYSSQHKFESGTGWPSFYKTIDPAHVWETTDITHGMVRKEVVCVRCHAHQGHVFSDGPRPTGLRYCVNAAALSFEPTSGEGEDS 738
GTE FTG+Y +NTKQ+GTY C CG P +SS+ K++SG GWPSFYK I+P+ V E D THGMVR E+VC C AH GHVF DGP+PTGLRYC+N+A+L E E++
Sbjct: 27 GTEQAFTGKY-----WNTKQQGTYTCRCCGEPLFSSETKYDSGCGWPSFYKPIEPSVVDENVDTTHGMVRTEIVCHHCDAHLGHVFPDGPQPTGLRYCINSASLELETKEKNDEET 137
BLAST of mRNA_M-pyrifera_M_contig13310.5909.1 vs. uniprot
Match: A0A2H5XYN4_9BACT (Multifunctional fusion protein n=1 Tax=bacterium HR21 TaxID=2035416 RepID=A0A2H5XYN4_9BACT) HSP 1 Score: 153 bits (387), Expect = 4.520e-38 Identity = 70/118 (59.32%), Postives = 81/118 (68.64%), Query Frame = 1
Query: 373 RYVVGGGTEPPFTGRYSNGFKYNTKQRGTYNCAVCGLPAYSSQHKFESGTGWPSFYKTIDPAHVWETTDITHGMVRKEVVCVRCHAHQGHVFSDGPRPTGLRYCVNAAALSFEPTSGE 726
R GTEPPF GR+ +N K+ G Y C VCGLP Y+SQHKF+SGTGWPSF + IDP HV D +HGMVR E+ CVRC AH GHVF DGP PTG R+C+N+AAL F P E
Sbjct: 38 RVTQRAGTEPPFCGRF-----WNHKEPGIYACVVCGLPLYASQHKFDSGTGWPSFSQPIDPEHVGRRPDFSHGMVRTELYCVRCGAHLGHVFDDGPPPTGERHCLNSAALRFYPQGAE 150
BLAST of mRNA_M-pyrifera_M_contig13310.5909.1 vs. uniprot
Match: A0A1Q7N4K9_9BACT (Peptide methionine sulfoxide reductase MsrB n=4 Tax=Acidobacteria TaxID=57723 RepID=A0A1Q7N4K9_9BACT) HSP 1 Score: 147 bits (370), Expect = 5.850e-38 Identity = 69/127 (54.33%), Postives = 87/127 (68.50%), Query Frame = 1
Query: 334 TTSRQEKKLNMMQRYVVG-GGTEPPFTGRYSNGFKYNTKQRGTYNCAVCGLPAYSSQHKFESGTGWPSFYKTIDPAHVWETTDITHGMVRKEVVCVRCHAHQGHVFSDGPRPTGLRYCVNAAALSFE 711
T +K+L+ Q YV GTEP FTG+Y + TK GTYNC CG P +SS+ KF+SGTGWPSF++ +D + V TD +HGMVR EV C +C+AH GHVF DGP PTGLRYC+N+AAL +
Sbjct: 8 TEEEWQKQLSPEQYYVTRKAGTEPAFTGKY-----WKTKDPGTYNCVCCGEPLFSSESKFDSGTGWPSFWRPLDESAVLAHTDASHGMVRTEVRCSKCNAHLGHVFEDGPAPTGLRYCMNSAALDLK 129
BLAST of mRNA_M-pyrifera_M_contig13310.5909.1 vs. uniprot
Match: UPI000F0928EB (peptide-methionine (R)-S-oxide reductase MsrB n=1 Tax=Acinetobacter TaxID=469 RepID=UPI000F0928EB) HSP 1 Score: 146 bits (369), Expect = 8.870e-38 Identity = 64/116 (55.17%), Postives = 81/116 (69.83%), Query Frame = 1
Query: 391 GTEPPFTGRYSNGFKYNTKQRGTYNCAVCGLPAYSSQHKFESGTGWPSFYKTIDPAHVWETTDITHGMVRKEVVCVRCHAHQGHVFSDGPRPTGLRYCVNAAALSFEPTSGEGEDS 738
GTEP FTG+Y +NTKQ GTY C CG P +SS+ K++SG GWPSFY++I+P + E D +HGMVR E++C C AH GHVF DGP PTGLRYCVN+A+L + ED+
Sbjct: 27 GTEPAFTGKY-----WNTKQDGTYVCRCCGTPLFSSETKYDSGCGWPSFYRSINPTAIEEHIDTSHGMVRSEIICHHCDAHLGHVFDDGPEPTGLRYCVNSASLELKTNEKNDEDT 137
BLAST of mRNA_M-pyrifera_M_contig13310.5909.1 vs. uniprot
Match: UPI001EE1859F (peptide-methionine (R)-S-oxide reductase MsrB n=1 Tax=Kordiimonas gwangyangensis TaxID=288022 RepID=UPI001EE1859F) HSP 1 Score: 145 bits (366), Expect = 9.550e-38 Identity = 63/109 (57.80%), Postives = 79/109 (72.48%), Query Frame = 1
Query: 388 GGTEPPFTGRYSNGFKYNTKQRGTYNCAVCGLPAYSSQHKFESGTGWPSFYKTIDPAHVWETTDITHGMVRKEVVCVRCHAHQGHVFSDGPRPTGLRYCVNAAALSFEP 714
GGTEPPFTGRY +NTK +GTY CA C P +SS+ K++SG+GWPSF+ ID V E D +HGM+R E++C RC +H GHVF DGP+PTG RYC N+A+L EP
Sbjct: 5 GGTEPPFTGRY-----WNTKTKGTYLCAACKAPLFSSETKYDSGSGWPSFWAAIDEDAVAEKRDTSHGMIRTEILCARCDSHLGHVFPDGPQPTGRRYCTNSASLELEP 108
BLAST of mRNA_M-pyrifera_M_contig13310.5909.1 vs. uniprot
Match: L1J5Z0_GUITC (Peptide-methionine (R)-S-oxide reductase (Fragment) n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1J5Z0_GUITC) HSP 1 Score: 145 bits (367), Expect = 1.130e-37 Identity = 67/116 (57.76%), Postives = 84/116 (72.41%), Query Frame = 1
Query: 370 QRYVVGGGTEPPFTGRYSNGFKYNTKQRGTYNCAVCGLPAYSSQHKFESGTGWPSFYKTIDPAHVWETTDITH-GMVRKEVVCVRCHAHQGHVFSDGPRPTGLRYCVNAAALSFEP 714
+R V GTE FTG+ +G Y++K++GTY CAV GLP +SS+HK++SGTGWPSF++ +DP HV E D + GM R EV+C R AH GHVF DGP PTG RYC+NAAAL F P
Sbjct: 11 KRVVFSHGTEMAFTGKTVDGTSYDSKEQGTYVCAVGGLPLFSSEHKYDSGTGWPSFFQPVDPDHVIERIDTSAAGMTRVEVLCARTGAHLGHVFPDGPEPTGKRYCINAAALKFVP 126 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig13310.5909.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig13310.5909.1 >prot_M-pyrifera_M_contig13310.5909.1 ID=prot_M-pyrifera_M_contig13310.5909.1|Name=mRNA_M-pyrifera_M_contig13310.5909.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=158bp MMQRYVVGGGTEPPFTGRYSNGFKYNTKQRGTYNCAVCGLPAYSSQHKFEback to top mRNA from alignment at M-pyrifera_M_contig13310:2468..5495+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig13310.5909.1 ID=mRNA_M-pyrifera_M_contig13310.5909.1|Name=mRNA_M-pyrifera_M_contig13310.5909.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=3028bp|location=Sequence derived from alignment at M-pyrifera_M_contig13310:2468..5495+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig13310:2468..5495+ >mRNA_M-pyrifera_M_contig13310.5909.1 ID=mRNA_M-pyrifera_M_contig13310.5909.1|Name=mRNA_M-pyrifera_M_contig13310.5909.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=948bp|location=Sequence derived from alignment at M-pyrifera_M_contig13310:2468..5495+ (Macrocystis pyrifera P11B4 male)back to top |