mRNA_M-pyrifera_M_contig13175.5868.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig13175.5868.1 vs. uniprot
Match: D8LK31_ECTSI (Geranylgeranyl transferase type-2 subunit alpha n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK31_ECTSI) HSP 1 Score: 409 bits (1051), Expect = 2.150e-140 Identity = 202/279 (72.40%), Postives = 229/279 (82.08%), Query Frame = 1
Query: 31 QVVGAIRHKRASGEMDGEYKKLLGKLLRLHPDYYSMWNFRKEAVLQEVGRIEEA------AEQGDRA----------------EALRVLYKEELGLSVDCIQRNPKSYPAWHHHKWALQRGLDFLGGRSALEKELALCAQFLELDGRNFHCWAHRMWVAEQMSLSAQEDLDFTTAKIKQNFSNYSAFHFRSKVLPRMVDEAGCDRWQLLSDELELAHDAMFTEPADQSVWWYHHFLLTWAEEGSTAGDGAERDAERYAEILRAEASTLEELIEVEDRCK 801
+VVGAIRHKRA+G+MD EYK+LLGKLLRLHPDYYSMWNFRKEAVL E+ RIE+A ++ GD+A + + +Y+EEL LSVDCI+RNPKSYPAWHHHKWAL+RGLD LGGRSAL +LALCA FLELDGRNFHCWAHRMWVAE+M LSA+E+ DFTT KIKQNFSNYSAFHFRSKVLPRMV+EAG DRWQLLSDEL+L HDAMFTEPADQSVWWYHHFLLTWA++G+ + D+ERY ILRAEA+TL ELIEVE RCK
Sbjct: 28 KVVGAIRHKRATGQMDAEYKQLLGKLLRLHPDYYSMWNFRKEAVLAELSRIEDAHSRQGGSDDGDKAAEEISSGTLLSPSVQEQQKKKIYEEELALSVDCIKRNPKSYPAWHHHKWALERGLDLLGGRSALAGDLALCATFLELDGRNFHCWAHRMWVAERMGLSAREEFDFTTDKIKQNFSNYSAFHFRSKVLPRMVEEAGHDRWQLLSDELDLTHDAMFTEPADQSVWWYHHFLLTWADDGTDSCS----DSERYENILRAEAATLGELIEVEVRCK 302
BLAST of mRNA_M-pyrifera_M_contig13175.5868.1 vs. uniprot
Match: A0A835Z1Z5_9STRA (Geranylgeranyl transferase type-2 subunit alpha n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1Z5_9STRA) HSP 1 Score: 244 bits (624), Expect = 1.450e-76 Identity = 121/237 (51.05%), Postives = 159/237 (67.09%), Query Frame = 1
Query: 94 LLGKLLRLHPDYYSMWNFRKEAVLQEVGRIEEAAEQGDRAEALRVLYKEELGLSVDCIQRNPKSYPAWHHHKWALQRGLDFLGGRSALEKELALCAQFLELDGRNFHCWAHRMWVAEQMSLSAQEDLDFTTAKIKQNFSNYSAFHFRSKVLPRMVDEAGCDR-WQLLSDELELAHDAMFTEPADQSVWWYHHFLLTWAEEGSTAGDGAERDAERYAEILRAEASTLEELIEVEDRCK 801
++ K++R++PDYYSMWN+RKEA L + E A+ G + +V+ ++EL L+ +RNPK Y AWHH +W L+RG D +GG +A +EL LC QFL LD RNFHCWA+R WV EQ LSA+ED FTT KI +NFSNYSAFH+RSK+LP + + G L+ ELE+ H A FTEP DQS WWYH FL+ WA E A G E ++Y E+L+ E + EL+ VE+RCK
Sbjct: 55 VVDKVVRVNPDYYSMWNYRKEAALPILEAAEGQAKVGVQERRAQVV-EQELALAAAAFKRNPKCYSAWHHRRWVLERGADAIGGEAAYRRELELCRQFLLLDSRNFHCWAYRGWVVEQAGLSAEEDFAFTTEKILENFSNYSAFHYRSKLLPAVAEARGAGGVLTLVEQELEMVHQAFFTEPDDQSAWWYHRFLVGWAAE---ALHGTEHH-DKYPELLQKEVDCIRELLFVEERCK 286
BLAST of mRNA_M-pyrifera_M_contig13175.5868.1 vs. uniprot
Match: A4SAM5_OSTLU (Geranylgeranyl transferase type-2 subunit alpha n=2 Tax=Ostreococcus sp. 'lucimarinus' TaxID=242159 RepID=A4SAM5_OSTLU) HSP 1 Score: 175 bits (443), Expect = 3.430e-50 Identity = 95/244 (38.93%), Postives = 133/244 (54.51%), Query Frame = 1
Query: 91 KLLGKLLRLHPDYYSMWNFRKEAVLQEVGRIEEAAEQGDRAEALRVL--YKEELGLSVDCIQRNPKSYPAWHHHKWALQRGLDFLG-----GRSALEKELALCAQFLELDGRNFHCWAHRMWVAEQMSLSAQEDLDFTTAKIKQNFSNYSAFHFRSKVLPRMVDEAGCDRWQLLSDELELAHDAMFTEPADQSVWWYHHFLLTWAEEGSTAGDGAERDAERYAEILRAEASTLEELIEVEDRCK 801
K KLL L P+ + WN+R+E + G +E GD E + +EL +S ++ NPKSYP+W+H KW L+R ++ G R LE+E LCA L D RNFHCWA+R +VAE++ E+L +T KI+ NFSNYSA+H+RS +L + G + L E ELA +A +TEP DQS W YH +L + A A DA+ +L E T E+ ++E CK
Sbjct: 2 KACEKLLGLCPEILTAWNYRRETIEARTGDAATTSEGGDEGEXXXXXDWWSDELRVSETALRNNPKSYPSWYHRKWVLRRMIEAFGTEEGKARETLEREAKLCADMLNADDRNFHCWAYRRFVAEKLGRGVDEELQYTLTKIENNFSNYSAWHYRSAIL----ESRGAADAETLEREFELASNAFYTEPEDQSAWMYHRWLTSRAR--------AIEDAKDRESLLERERQTCREVSDLEPTCK 233
BLAST of mRNA_M-pyrifera_M_contig13175.5868.1 vs. uniprot
Match: A0A8J5DNR5_9CHEL (Geranylgeranyl transferase type-2 subunit alpha n=1 Tax=Nymphon striatum TaxID=424472 RepID=A0A8J5DNR5_9CHEL) HSP 1 Score: 175 bits (444), Expect = 3.490e-50 Identity = 88/215 (40.93%), Postives = 135/215 (62.79%), Query Frame = 1
Query: 55 KRASGEMDGEYKKLLGKLLRLHPDYYSMWNFRKEAVLQEVGRIEEAAEQGDRAEALRVLYKEELGLSVDCIQRNPKSYPAWHHHKWALQRGLDFLGGRSALEKELALCAQFLELDGRNFHCWAHRMWVAEQMSLSAQEDLDFTTAKIKQNFSNYSAFHFRSKVLP--------RMVDEAGCDRWQLLSDELELAHDAMFTEPADQSVWWYHHFLL 675
KR + E+D + KL ++L L+PD+YS+WNFRKE +L+ ++ + E + L+K++LG + C++ NPKSY AWHH W +Q + E+EL +C Q+L LD RNFHCW +R +V ++ +S ++L+F++ KI+ NFSNYSA+H+RSK+LP + +DE+ L +E EL +A FT+P DQS W+YH +LL
Sbjct: 38 KRENRELDEDALKLTTEILSLNPDFYSLWNFRKEIILE--------FKRTRKEEEIIKLFKDDLGFTEICLRNNPKSYCAWHHRHWVMQNT-----PKPDWERELKICNQYLLLDERNFHCWDYRRFVVQESGISNNKELEFSSEKIENNFSNYSAWHYRSKLLPLVHAGNSYKKIDESK------LLEEFELVQNAAFTDPNDQSAWFYHRWLL 233
BLAST of mRNA_M-pyrifera_M_contig13175.5868.1 vs. uniprot
Match: UPI000C78249F (geranylgeranyl transferase type-2 subunit alpha-like n=1 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C78249F) HSP 1 Score: 176 bits (447), Expect = 1.150e-48 Identity = 91/238 (38.24%), Postives = 141/238 (59.24%), Query Frame = 1
Query: 31 QVVGAIRHKRASGEMDGEYKKLLGKLLRLHPDYYSMWNFRKEAVL----------QEVGRIEEAAEQGDRAEALRV-------LYKEELGLSVDCIQRNPKSYPAWHHHKWALQRGLDFLGGRSALEKELALCAQFLELDGRNFHCWAHRMWVAEQMSLSAQEDLDFTTAKIKQNFSNYSAFHFRSKVLPRMVDEAGCDRWQLLSDELELAHDAMFTEPADQSVWWYHHFLLTWAEEG 693
+ +G + +RA G++D + + G++L+ +PD ++WN RKE +L ++VG E+ E+ D + V + EL L+ C+ NPKSY AWHH W L+ ++ +ELALC +FL+LD RNFHCW +R WVA++ + Q++L+FT KI++NFSNYSA+H+RSK+LP + + + + EL+L +A FT+PAD S W+YH +LL EG
Sbjct: 30 KAMGVLLSRRAEGKLDDQQLVISGQVLQGNPDISTLWNIRKEILLHYINLGTQKEKDVGEGEKGQEEVDCGKEENVPMHDQDEMLSSELDLTQQCLIANPKSYGAWHHRTWCLEHMIN-----PDWSRELALCRKFLKLDERNFHCWDYRKWVADKAGVKPQQELEFTLEKIEENFSNYSAWHYRSKLLPLLNPDTSSIQEDQVHKELDLVQNAAFTDPADSSAWFYHTWLLGQESEG 262
BLAST of mRNA_M-pyrifera_M_contig13175.5868.1 vs. uniprot
Match: UPI000CEFEA1D (geranylgeranyl transferase type-2 subunit alpha-like n=1 Tax=Terrapene carolina triunguis TaxID=2587831 RepID=UPI000CEFEA1D) HSP 1 Score: 165 bits (418), Expect = 1.950e-46 Identity = 87/222 (39.19%), Postives = 131/222 (59.01%), Query Frame = 1
Query: 19 RACVQVVGAIRHKRASGEMDGEYKKLLGKLLRLHPDYYSMWNFRKEAVLQEVGRIEEAAEQGDRAEALRVLYKEELGLSVDCIQRNPKSYPAWHHHKWALQRGLDFLGGRSALEKELALCAQFLELDGRNFHCWAHRMWVAEQMSLSAQEDLDFTTAKIKQNFSNYSAFHFRSKVLPRMVDEA---GCDRWQLLSDELELAHDAMFTEPADQSVWWYHHFLL 675
R V AI KR +G++D E +L ++L ++PD+ ++WNFR+E +L+ E E ++ L + EL C++ NPKSY WHH W ++ +EL LCA+FLE+D RNFHCW +R +V ++ +SA ++L FT I +NFSNYS++H+RS++LPR+ + G +L ELEL +A FT+P DQS W+YH +LL
Sbjct: 26 RQYVAATTAIFEKRKTGQLDKEALELTNQILGVNPDFATLWNFRREILLR--------LEPEGSPEEMQSLCRGELSFLESCLRVNPKSYGTWHHRCWVMEHV-----PHPDWARELELCAKFLEIDERNFHCWDYRRFVVQRAQVSAADELHFTDRLITRNFSNYSSWHYRSRLLPRLHPDPRQPGRPTEAVLLKELELVQNAFFTDPNDQSAWFYHRWLL 234
BLAST of mRNA_M-pyrifera_M_contig13175.5868.1 vs. uniprot
Match: A0A8B7Z413_ACAPL (Geranylgeranyl transferase type-2 subunit alpha n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7Z413_ACAPL) HSP 1 Score: 166 bits (421), Expect = 3.530e-46 Identity = 87/210 (41.43%), Postives = 122/210 (58.10%), Query Frame = 1
Query: 55 KRASGEMDGEYKKLLGKLLRLHPDYYSMWNFRKEAVLQEVGRIEEAAEQGDRAEALRVLYKEELGLSVDCIQRNPKSYPAWHHHKWALQRGLDFLGGRSALEKELALCAQFLELDGRNFHCWAHRMWVAEQMSLSAQEDLDFTTAKIKQNFSNYSAFHFRSKVLPRM---VDEAGCDRWQLLSDELELAHDAMFTEPADQSVWWYHHFLL 675
KR GE D E +L +LL +PD+YS+WN+R+E L + E+ E DR Y +EL C+ NPKSY +WHH W L + ++E+ALC Q+LE D RNFHCW +R +V + + E+L F+ AKI NFSNYS++H+RSK+LP + + G + +L E EL +A FT+P DQS W+YH +LL
Sbjct: 38 KRKDGEFDDEALELTSQLLSANPDFYSLWNYRREIFLN-LAESRESQEMQDR-------YSKELVFLESCLMVNPKSYGSWHHRGWVLDHMPE-----PDWKREVALCNQYLEYDERNFHCWDYRRFVVSRAKVQPAEELKFSDAKITSNFSNYSSWHYRSKLLPLLHPDPESKGRVKEDILLQEYELVQNAFFTDPNDQSAWFYHRWLL 234
BLAST of mRNA_M-pyrifera_M_contig13175.5868.1 vs. uniprot
Match: A0A087TEC0_STEMI (Geranylgeranyl transferase type-2 subunit alpha (Fragment) n=1 Tax=Stegodyphus mimosarum TaxID=407821 RepID=A0A087TEC0_STEMI) HSP 1 Score: 164 bits (416), Expect = 1.090e-45 Identity = 85/209 (40.67%), Postives = 127/209 (60.77%), Query Frame = 1
Query: 55 KRASGEMDGEYKKLLGKLLRLHPDYYSMWNFRKEAVLQEVGRIEEAAEQGDRAEALRVLYKEELGLSVDCIQRNPKSYPAWHHHKWALQRGLDFLGGRSALEKELALCAQFLELDGRNFHCWAHRMWVAEQMSLSAQEDLDFTTAKIKQNFSNYSAFHFRSKVLPRMVDE--AGCDRWQLLSDELELAHDAMFTEPADQSVWWYHHFLL 675
KR GE D E +L G+LL +PD+Y++WN+R+E +L + E L+ L ELGL+ +C++ NPKSY AWHH W ++ D + +KEL LC FL D RNFHCW +R V ++ ++ E+L ++T I+ NFSNYSA+H+RS +LP + + + +L EL++ +A FT+P+DQSVW+YH +LL
Sbjct: 38 KREHGEYDEEGLELTGRLLEQNPDFYTLWNYRREILL--------FLKPTKNQEELKALTLVELGLTQNCLRVNPKSYGAWHHRFWVMEFDPD-----ADWKKELKLCGYFLSKDERNFHCWDYRRLVVKKCGVAPDEELTYSTELIEANFSNYSAWHYRSTLLPIVYPDHSKASLKEDILLKELDIVQNAAFTDPSDQSVWFYHRWLL 233
BLAST of mRNA_M-pyrifera_M_contig13175.5868.1 vs. uniprot
Match: A0A4D9DIG4_9SAUR (Geranylgeranyl transferase type-2 subunit alpha n=1 Tax=Platysternon megacephalum TaxID=55544 RepID=A0A4D9DIG4_9SAUR) HSP 1 Score: 168 bits (426), Expect = 1.740e-45 Identity = 89/226 (39.38%), Postives = 134/226 (59.29%), Query Frame = 1
Query: 19 RACVQVVGAIRHKRASGEMDGEYKKLLGKLLRLHPDYYSMWNFRKEAVLQEVGRIEEAAEQGDRAEALRVLYKEELGLSVDCIQRNPKSYPAWHHHKWALQRGLDFLGGRSALEKELALCAQFLELDGRNFHCWAHRMWVAEQMSLSAQEDLDFTTAKIKQNFSNYSAFHFRSKVLPRMVDEA---GCDRWQLLSDELELAHDAMFTEPADQSVWWYHHFLLTWAE 687
R V AI KR +G++D E +L ++L ++PD+ ++WNFR+E +L E+ E +++L + EL C++ NPKSY WHH W ++ +EL LCA+FLE+D RNFHCW +R +V ++ +SA ++L FT I +NFSNYS++H+RS++LPR+ + G +L ELEL +A FT+P DQS W+YH +LL AE
Sbjct: 31 RQYVAATTAIFEKRKTGQLDKEALELTNQILGVNPDFATLWNFRREIIL--------CLEREGSPEEMQLLCRGELSFLESCLRVNPKSYGTWHHRCWVMEHV-----PHPDWARELELCAKFLEIDERNFHCWDYRRFVVQRAQVSAADELHFTDHLITRNFSNYSSWHYRSRLLPRLHPDPRQPGRPTEAVLLKELELVQNAFFTDPNDQSAWFYHRWLLGRAE 243
BLAST of mRNA_M-pyrifera_M_contig13175.5868.1 vs. uniprot
Match: A0A821PVZ3_9NEOB (Geranylgeranyl transferase type-2 subunit alpha n=1 Tax=Ranitomeya imitator TaxID=111125 RepID=A0A821PVZ3_9NEOB) HSP 1 Score: 162 bits (410), Expect = 2.660e-45 Identity = 86/220 (39.09%), Postives = 130/220 (59.09%), Query Frame = 1
Query: 28 VQVVGAIRHKRASGEMDGEYKKLLGKLLRLHPDYYSMWNFRKEAVLQEVGRIEEAAEQGDRA-EALRVLYKEELGLSVDCIQRNPKSYPAWHHHKWALQRGLDFLGGRSALEKELALCAQFLELDGRNFHCWAHRMWVAEQMSLSAQEDLDFTTAKIKQNFSNYSAFHFRSKVLPRMVDEA---GCDRWQLLSDELELAHDAMFTEPADQSVWWYHHFLL 675
V A +KR G++D E ++ ++L L+PD+ S+WN R+E L A DR+ E +R LY EL +C++ NPKSY W+H W ++ + +EL LC QFLE+D RNFHCW +R +VA+ + ++L++T+ I +NFSNYS++H+RSK+LP++ + G +L ELEL +A FT+P DQS W+YH +LL
Sbjct: 29 VSATQAAFNKRKGGQLDKEALEITAQILALNPDFASLWNLRREVFL---------ALGSDRSDEEMRSLYLSELSFLQNCLRVNPKSYGTWYHRCWIMKHMPE-----PDWARELTLCNQFLEIDERNFHCWGYRRFVAQSFHVPPSDELEYTSDLITKNFSNYSSWHYRSKLLPQIHPDPQHLGRATENVLLSELELVQNAFFTDPNDQSAWFYHRWLL 234 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig13175.5868.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig13175.5868.1 >prot_M-pyrifera_M_contig13175.5868.1 ID=prot_M-pyrifera_M_contig13175.5868.1|Name=mRNA_M-pyrifera_M_contig13175.5868.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=267bp MTSARRRACVQVVGAIRHKRASGEMDGEYKKLLGKLLRLHPDYYSMWNFRback to top mRNA from alignment at M-pyrifera_M_contig13175:4428..8911+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig13175.5868.1 ID=mRNA_M-pyrifera_M_contig13175.5868.1|Name=mRNA_M-pyrifera_M_contig13175.5868.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=4484bp|location=Sequence derived from alignment at M-pyrifera_M_contig13175:4428..8911+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig13175:4428..8911+ >mRNA_M-pyrifera_M_contig13175.5868.1 ID=mRNA_M-pyrifera_M_contig13175.5868.1|Name=mRNA_M-pyrifera_M_contig13175.5868.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1602bp|location=Sequence derived from alignment at M-pyrifera_M_contig13175:4428..8911+ (Macrocystis pyrifera P11B4 male)back to top |