mRNA_M-pyrifera_M_contig13150.5866.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig13150.5866.1 vs. uniprot
Match: D7G0H9_ECTSI (Ankyrin repeat domain protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0H9_ECTSI) HSP 1 Score: 328 bits (840), Expect = 8.600e-108 Identity = 201/360 (55.83%), Postives = 230/360 (63.89%), Query Frame = 1
Query: 1 MADRTHLHRAAQRGDIGAVRALVQAVDVNVRGGWRVESPLHAASRAGRPDVIQCLVEAGARTEVRDRNNDTPLLLAAWLGHAAAIAKLLASGARVDADGIPRSALHCACMQXXXXXXXXXXXXGADEEAVDEDGNTPSQVIGTMTENAEQHTENIVAIHDMLRCAPADRVWRRRGWLVVLRARDCAAVSMLPXXXXXXXXXXXXXXXXXXV----VSSVARPQVGPAAT----FEGKTFIIGQPK-----KVVGTRRNQGGRAV-------GHGETKASKRQ--AGGNSGXXXXXXXXXXXXXRRSRSLRKGDEKRSKRKQEEGAASDREEANRQDLRNVVARLIGLGEEGAFRSVLSFL 1014
MADRTHLHRAAQRGDIGAVRALVQAVDVN+RGGWRVESPLHAASRAG+PDVI CLV AGA TEVRDRNNDTPLLLAAWLGHA AIAKLLASGARVDADGIPRSALHCACMQ GADE DEDGN+P+QVIGTM+E+ E+ E+IV I +MLR APADR WRRRGWLV+LR RDC A +LP + + AAT FEG+ G + KV G +++ G V G G+ S+R AGG+SG + R ++R ++ GA S+ E A RQ L ++VARLIGLGEEGAFR VLSFL
Sbjct: 1 MADRTHLHRAAQRGDIGAVRALVQAVDVNLRGGWRVESPLHAASRAGKPDVIACLVGAGAHTEVRDRNNDTPLLLAAWLGHATAIAKLLASGARVDADGIPRSALHCACMQGHAACVSELLRGGADETVEDEDGNSPAQVIGTMSESLER-AEDIVLIREMLRRAPADRAWRRRGWLVMLRNRDCVAAGLLPSARPPPTTVTTRSAARRGARVWAIDGGGSRSIAGAATSPGFFEGQGLTTGHIRNHHQLKVHGKKKSFGAPGVTVAGSRGGGGKAPRSRRSPSAGGSSGSGSFCPPGKGHVSSNKKRPRGAAKRRVGKRGRGGAESEEELAGRQALASLVARLIGLGEEGAFRCVLSFL 359
BLAST of mRNA_M-pyrifera_M_contig13150.5866.1 vs. uniprot
Match: D8LQN0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQN0_ECTSI) HSP 1 Score: 82.8 bits (203), Expect = 8.440e-14 Identity = 67/193 (34.72%), Postives = 92/193 (47.67%), Query Frame = 1
Query: 19 LHRAAQRGDIGAVRALVQA----VDVNVRGGWRVESPLHAASRAGRP--DVIQCLVEAGARTEVRDRNND--TPLLLAA--WLGHAAAIAKLLASGARVDA----DGIPRSALHCACMQXXXXXXXXXXXXGADEEAVDEDGNTPSQVIGTMTENA---EQHTENIVAIHDMLRCAPADRVWRRRGWLVVLRA 546
L AA RG ++AL+ VD GW + + R D ++ L+ AGA V+ N+ TPL LA W+ I LL GA ++A D P LH AC + GADE+ + DG+TP+ V+G + +N E+ + IH ML APADR WRRRGWLV+ R+
Sbjct: 249 LEIAAGRGHADVLKALLDKRSSEVDTANDLGWAALHYVASFDETVRDKGDAVRVLLGAGADVNVKGTNDSCATPLHLAVNRWMTSTGTICALLEGGANINARTAGDDTP---LHIACTRLRGSVVELLLRWGADEKLPNNDGDTPADVVGVLEQNDLDDEEREADNQRIHRMLARAPADRSWRRRGWLVLSRS 438
BLAST of mRNA_M-pyrifera_M_contig13150.5866.1 vs. uniprot
Match: D7FSI6_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSI6_ECTSI) HSP 1 Score: 77.8 bits (190), Expect = 2.660e-12 Identity = 64/190 (33.68%), Postives = 93/190 (48.95%), Query Frame = 1
Query: 28 AAQRGDIGAVRALVQ-AVDVNVRG----GWRVESPLHAASRAGRPDVIQCLVEAGARTEVRDRNN----DTPLLLAAWLGHAAAIAKLLASGA---RVDADGIPRSALHCACMQXXXXXXXXXXXX---GADEEAVDEDGNTPSQVIGTMTENAEQHTENIVAIHDMLRCAPADRVWRRRGWLVVLRARD 552
A Q G +G ++A ++ VD + + GW + LH A+ + + ++ L+EAGA +V DTPLL AA A+ LL +GA + D +G LH A + GA E AV++ GNTP++V + + TE +L APADR WRRRGW+V+LRAR
Sbjct: 174 ATQLGHVGVIKAFLEHGVDASSQACPASGW---TALHQAALDNQAEAVEVLLEAGADADVESLPGSPCYDTPLLAAAESMSNEALRVLLRNGADPNKPDDNG--SMPLHLAAHEQTPGVMEVVDLLLRWGASETAVNKHGNTPAEVFQRLAIHRPDATEERAGALVLLARAPADRAWRRRGWVVMLRARS 358
BLAST of mRNA_M-pyrifera_M_contig13150.5866.1 vs. uniprot
Match: D7FY50_ECTSI (Similar to ankyrin 2,3/unc44, partial n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY50_ECTSI) HSP 1 Score: 77.0 bits (188), Expect = 6.200e-12 Identity = 54/147 (36.73%), Postives = 74/147 (50.34%), Query Frame = 1
Query: 112 SPLHAASRAGRPDVIQCLVEAGARTEVRDRNNDTPLLLAAWLGHAAAIAKLLASGARVD-ADGIPRSALHCACMQXXXXXXXXXXXXGADEEAVDEDGNTPSQVIGTMTENAEQHTENIVAIHDMLRCAPADRVWRRRGWLVVLRAR 549
S + A G DV+ ++ A + D + L +AA GHA A+ L+ +GA VD A+ + LH ACM ADE +ED P V+G ++ E + I++ML APADRVWRRRGWL +LRAR
Sbjct: 206 SAVDLAVERGTTDVLLEILAARPHVDALDDRGVSALGIAARKGHAKALDVLIDAGADVDEANQEMDTPLHLACMHLQPACVRTLLRHNADEVFRNEDLAFPDDVVGHAVAGDKRDEEVVEWIYEMLARAPADRVWRRRGWLAMLRAR 352
BLAST of mRNA_M-pyrifera_M_contig13150.5866.1 vs. uniprot
Match: D8LBP9_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBP9_ECTSI) HSP 1 Score: 71.6 bits (174), Expect = 4.210e-10 Identity = 59/210 (28.10%), Postives = 90/210 (42.86%), Query Frame = 1
Query: 28 AAQRGDIGAVRALVQA-VDVNVRGGWRVE-------------------------------SPLHAASRAGRPDVIQCLVEAGARTEVRDRNNDTPLLLAAWLGHAA-AIAKLLASGARVDADGIPRSALHCACMQXXXXXXXXXXXX---GADEEAVDEDGNTPSQVIGTMTENAEQHTENIVAIHDMLRCAPADRVWRRRGWLVVLRAR 549
A+QRG + V+ L+ A DV++R G R + LHA + + L++AGA + + TPL +A G + A+ LL G +V + ++ LH ACM G E +D+ GNTP+ ++ ++ + + H +L APADR WRRR WLV+LRAR
Sbjct: 211 ASQRGHLSTVKTLLNAGADVSMRTGHRNSXXXXXXXXXXXXXXXXXXXXXXXVNASKHGYTALHAGCAMNQAGAMDVLLDAGADMDRKCYGASTPLCVAIEFGASVQAVHTLLRRGCQVSGP-MDKTMLHLACMTMAPGFDAIVDLLLRWGVSELTLDKGGNTPAALLSVAEGSSSRKAREVERAHVLLANAPADRAWRRRSWLVMLRAR 419
BLAST of mRNA_M-pyrifera_M_contig13150.5866.1 vs. uniprot
Match: D8LCR2_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCR2_ECTSI) HSP 1 Score: 69.3 bits (168), Expect = 1.790e-9 Identity = 61/169 (36.09%), Postives = 77/169 (45.56%), Query Frame = 1
Query: 112 SPLHAASRAGRPDVIQCLVEAGARTEVRDRN-------------NDTPLLLAAWLGHAAAIAKLLASG-ARVDA-DGIPRSALHCACMQXXXXXXXXXXXX----GADEEAVDEDGNTPSQVIGTMTENAEQHTENIVAIHDMLRCAPADRVWRRRGWLVVLRARDCAA 561
S LH A R GR DV+ L+E GA E R TPL AA+ G+ + LL G A +A D S LH CM GADE A DED +TP+ ++ + +E H + +L APADR WRRRG LV+LRA+ A
Sbjct: 196 SALHWAVRDGRSDVVDALIEVGADVEARTSRMISYYSDGGHCMKGMTPLHEAAYQGNYPGMLVLLQKGRANANAQDEHGHSPLHILCMNPQVCSAAACSDILLRSGADETATDEDRHTPADIMAS----SEGHNG---WLQQLLANAPADRAWRRRGTLVMLRAQGVQA 357
BLAST of mRNA_M-pyrifera_M_contig13150.5866.1 vs. uniprot
Match: A0A6H5JHY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY9_9PHAE) HSP 1 Score: 69.7 bits (169), Expect = 2.260e-9 Identity = 54/161 (33.54%), Postives = 79/161 (49.07%), Query Frame = 1
Query: 79 DVNVRGGWRVESPLHAASRAGRPDVIQCLVEAGARTEVRDRNNDTPLLLAAWLGHAAAIAKLLASGARVDA-DGIPRSALHCACMQXXXXXXXXXXXX----GADEEAVDEDGNTPSQVIGTMTENAEQHTENIVAIHDMLRCAPADRVWRRRGWLVVLRA 546
DVN + + + L AS + I L EAGA E + N TPL +A+ G AA LL GA V + ++ LH + GADE AV E+G+T + ++ TE ++ E++ + +L APADR WRRRG+L++ RA
Sbjct: 549 DVNAKVNNGITA-LRVASAFDKAPAIDVLTEAGANIEAQ-ANGSTPLHVASQEGRLAAGIALLRHGASVGKKNAAAQTPLHLVAAKAGSPGTAEMVDLLLRRGADETAVSENGHTAADMVVLKTEESDSLAEDVDRVRKLLARAPADRAWRRRGFLILSRA 707
BLAST of mRNA_M-pyrifera_M_contig13150.5866.1 vs. uniprot
Match: Q8QNP0_ESV1K (EsV-1-21 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNP0_ESV1K) HSP 1 Score: 65.9 bits (159), Expect = 3.330e-8 Identity = 55/182 (30.22%), Postives = 73/182 (40.11%), Query Frame = 1
Query: 118 LHAASRAGRPDVIQCLVEAGARTEVRDRNNDTPLLLAAWLGHAAAIAKLLASGARVDADG-----------------------------------IPRSALHCACMQXXXXXXXXXXXX--GADEEAVDEDGNTPSQVIGTMTENAEQHTENIVAIHDMLRCAPADRVWRRRGWLVVLRARD 552
LHAA+ G DV+ L++ R + D+N TPL+ +A H A LL +GA A+ SALH A GADE VD+ G TP V + T ++ E + +L APADR WRRRGWLV+L R+
Sbjct: 300 LHAAASGGHNDVVNYLLDNSVRIDPDDKNMMTPLMWSAMKNHLCVSATLLEAGANASAEDQMGESSLSSDSWSCSVDMALLLLRYGADVNASGGLFGSSALHNAIKNRDNTEAMVDLLLRWGADETVVDDRGRTPLDVFTSGT-RFQRTAETKERVRKLLVNAPADRTWRRRGWLVMLWERE 480
BLAST of mRNA_M-pyrifera_M_contig13150.5866.1 vs. uniprot
Match: A0A6H5K513_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K513_9PHAE) HSP 1 Score: 64.7 bits (156), Expect = 7.670e-8 Identity = 53/155 (34.19%), Postives = 70/155 (45.16%), Query Frame = 1
Query: 109 ESPLHAASRAGRPDVIQCLVEAGARTEVRDR--NNDTPLLLAAWLGHAAAIAKLLASGARVDA---DGIPRSALHCACMQXXXXXXXXXXXX---GADEEAVDEDGNTPSQVIGTMTENAEQHTENIVAIHDMLRCAPADRVWRRRGWLVVLRAR 549
+SPLH A+ RPD + L++AGA R +N A+ LL+ GARVD DG +ALH A GA E+AVDE+ TP + + + ++L APADR WRRRGWLV+L R
Sbjct: 274 QSPLHWAAGHNRPDCVAVLLDAGANINGRCNFLDNHXXXXXXXXXXXXEALLALLSRGARVDEKTDDG--STALHLAGHARGYKVDDTVDTLLRWGASEQAVDENDETPVDRLTEVAREVVWEWPELDRALELLARAPADRAWRRRGWLVMLHER 426
BLAST of mRNA_M-pyrifera_M_contig13150.5866.1 vs. uniprot
Match: D8LQI9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQI9_ECTSI) HSP 1 Score: 62.4 bits (150), Expect = 2.050e-7 Identity = 61/196 (31.12%), Postives = 89/196 (45.41%), Query Frame = 1
Query: 19 LHRAAQRGDIGAVRALVQA----VDVNVRGGWRVESPLHAASRAGRP-----DVIQCLVEAGARTEVRDRNND----TPLLLAAWLGHAA--AIAKLLASGARVDADGI-PRSALHCACMQXXXXXXXXXXXXGADEEAVDEDGNTPSQVIGTMTEN----AEQHTENIVAIHDMLRCAPADRVWRRRGWLVVLRA 546
L AA G ++AL+ +D GW + LH A+ P D ++ L+ AGA +V + NN+ TPL +A + + LL G+ + A + ++ LH AC GADE+ + G TP+ VI +N E+ + I ML APADR WRRRGWLV+ R+
Sbjct: 87 LEIAAHGGHADVLKALLDKDSSQLDDTDGEGW---AALHYAAVVDGPVRDNGDAVRVLLGAGA--DVNETNNNDSCFTPLHIAVNGRKVSDGTVRALLEGGSNIHARALLDQTPLHIACKHASVTGVELLLRWGADEKLTNNVGKTPADVIRPRRQNDFDDEEEREADNQRIRRMLEHAPADRSWRRRGWLVLSRS 277 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig13150.5866.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig13150.5866.1 >prot_M-pyrifera_M_contig13150.5866.1 ID=prot_M-pyrifera_M_contig13150.5866.1|Name=mRNA_M-pyrifera_M_contig13150.5866.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=339bp MADRTHLHRAAQRGDIGAVRALVQAVDVNVRGGWRVESPLHAASRAGRPDback to top mRNA from alignment at M-pyrifera_M_contig13150:3204..4220- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig13150.5866.1 ID=mRNA_M-pyrifera_M_contig13150.5866.1|Name=mRNA_M-pyrifera_M_contig13150.5866.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1017bp|location=Sequence derived from alignment at M-pyrifera_M_contig13150:3204..4220- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig13150:3204..4220- >mRNA_M-pyrifera_M_contig13150.5866.1 ID=mRNA_M-pyrifera_M_contig13150.5866.1|Name=mRNA_M-pyrifera_M_contig13150.5866.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2034bp|location=Sequence derived from alignment at M-pyrifera_M_contig13150:3204..4220- (Macrocystis pyrifera P11B4 male)back to top |