mRNA_M-pyrifera_M_contig13018.5822.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig13018.5822.1 vs. uniprot
Match: D7FMZ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMZ0_ECTSI) HSP 1 Score: 115 bits (289), Expect = 2.470e-30 Identity = 71/122 (58.20%), Postives = 82/122 (67.21%), Query Frame = 1
Query: 28 REGGGRPKGRYGGKKLRELLQTYKAAVKLGQLAHAHIAARDLPAAMLQAQVHVDKRQADSDPAFLKRQANRGVCRKVALRKFTRARLQLRKAALAARARRENWEQGVAYFRGVEKEYLGASA 393
R G GRPKGR+G K+L E++ TYKA V+ GQL A + RDL AML A V VDK + PAFLKRQ+NRGV R ALRK T+ R QL KAALAA A + WE+GV YFR V KE A A
Sbjct: 20 RGGAGRPKGRFGRKRLHEMMATYKARVEQGQLEFADMHVRDLSTAMLDAAVEVDKHEEVWRPAFLKRQSNRGVRRAEALRKLTKHRSQLEKAALAATACKAGWEKGVEYFRAVVKECRSAVA 141
BLAST of mRNA_M-pyrifera_M_contig13018.5822.1 vs. uniprot
Match: A0A6H5JVH8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVH8_9PHAE) HSP 1 Score: 110 bits (275), Expect = 9.250e-26 Identity = 75/160 (46.88%), Postives = 90/160 (56.25%), Query Frame = 1
Query: 1 TPPEKRGGIREGGGRPKGRYGGKKLRELLQTYKAAVKLGQLAHAHIAARDLPAAMLQAQVHVDKRQADSDPAFLKRQANRGVCRKVALRKFTRARLQLRKAALAARARRENWEQGVAYFRGVEKEYLGASA------------------LLVSHAQAGKL 426
PP KRGG R G GRPKG YG K+LR+ Q ++ GQL A + +RDLP AM A +++ PAFLKRQ+NRGV RK ALRK + R QL KAA+A+ A R WE G YFR V KE S+ +LVSHAQAG L
Sbjct: 134 APPGKRGGARPGAGRPKGSYGRKRLRQAAQQLNYYLERGQLQCAQMVSRDLPGAMSYAVKEAHQQEEVYRPAFLKRQSNRGVGRKEALRKLAKHRSQLEKAAVASAACRSGWEGGQDYFRAVIKECQSCSSHTCWTQCKRVWATRCSESVLVSHAQAGSL 293
BLAST of mRNA_M-pyrifera_M_contig13018.5822.1 vs. uniprot
Match: A0A6H5KAS5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAS5_9PHAE) HSP 1 Score: 110 bits (276), Expect = 1.230e-25 Identity = 77/151 (50.99%), Postives = 88/151 (58.28%), Query Frame = 1
Query: 1 TPPEKRGGIREGGGRPKGRYGGKKLRELLQTYKAAVKLGQLAHAHIAARDLPAAMLQAQVHVDKRQADSDPAFLKRQANRGVCRKVALRKFTRARLQLRKAALAARARRENWEQGVAYFRGVEKEYLGASA---------LLVSHAQAGKL 426
P K GG R G GRPKG YG K++RE Q ++ GQ A IA+RDLP ML A V + Q PAFLKRQ+NRGV RK ALRK + R QL KAA A+ A R WE+G YFR V KE A A +LVSHAQAG L
Sbjct: 128 APAAKVGGARPGSGRPKGSYGWKRVREAAQQLNDYIERGQPHCALIASRDLPGDMLDAVKEVHQHQEVWGPAFLKRQSNRGVGRKEALRKLAKHRSQLEKAAAASAACRSGWERGQDYFRAVIKECQSAVAATSAGLNESVLVSHAQAGSL 278
BLAST of mRNA_M-pyrifera_M_contig13018.5822.1 vs. uniprot
Match: A0A6H5JU25_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU25_9PHAE) HSP 1 Score: 110 bits (276), Expect = 1.600e-25 Identity = 77/151 (50.99%), Postives = 88/151 (58.28%), Query Frame = 1
Query: 1 TPPEKRGGIREGGGRPKGRYGGKKLRELLQTYKAAVKLGQLAHAHIAARDLPAAMLQAQVHVDKRQADSDPAFLKRQANRGVCRKVALRKFTRARLQLRKAALAARARRENWEQGVAYFRGVEKEYLGASA---------LLVSHAQAGKL 426
P K GG R G GRPKG YG K++RE Q ++ GQ A IA+RDLP ML A V + Q PAFLKRQ+NRGV RK ALRK + R QL KAA A+ A R WE+G YFR V KE A A +LVSHAQAG L
Sbjct: 128 APAAKVGGARPGSGRPKGSYGWKRVREAAQQLNDYIERGQPHCALIASRDLPGDMLDAVKEVHQHQEVWGPAFLKRQSNRGVGRKEALRKLAKHRSQLEKAAAASAACRSGWERGQDYFRAVIKECQSAVAATSAGLNESVLVSHAQAGSL 278
BLAST of mRNA_M-pyrifera_M_contig13018.5822.1 vs. uniprot
Match: A0A6H5JUL0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUL0_9PHAE) HSP 1 Score: 106 bits (264), Expect = 6.410e-24 Identity = 70/151 (46.36%), Postives = 88/151 (58.28%), Query Frame = 1
Query: 1 TPPEKRGGIREGGGRPKGRYGGKKLRELLQTYKAAVKLGQLAHAHIAARDLPAAMLQAQVHVDKRQADSDPAFLKRQANRGVCRKVALRKFTRARLQLRKAALAARARRENWEQGVAYFRGVEKEYLGASAL---------LVSHAQAGKL 426
PP KRGG R G GRPKG YG +LR+ Q ++ GQL A + +RDLP AML A +++ PAFLKRQ+NRG+ RK ALRK + + QL+K A A+ A R WE+G R V KE A A+ LVSH+QAG L
Sbjct: 47 APPGKRGGARPGAGRPKGSYGRNRLRQAAQQLNGYLERGQLQCAQMVSRDLPGAMLDAVKEAHQQEVVYRPAFLKRQSNRGLGRKEALRKLAKHQSQLQKEAAASAACRSGWERGQGCLRAVIKECQSAIAVTSAGLNESVLVSHSQAGSL 197
BLAST of mRNA_M-pyrifera_M_contig13018.5822.1 vs. uniprot
Match: A0A6H5JGM4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGM4_9PHAE) HSP 1 Score: 92.0 bits (227), Expect = 4.480e-19 Identity = 66/144 (45.83%), Postives = 80/144 (55.56%), Query Frame = 1
Query: 1 TPPEKRGGIREGGGRPKGRYGGKKLRELLQTYKAAVKLGQLAHAHIAARDLPAAMLQA--QVHVDKRQADSDPAFLKRQANRGVCRKVALRKFTRARLQLRKAALAARARRENWEQGVAYFRGVEKEYLGASALLVSHAQAGKL 426
PP RGG R G GRPKG YG K+L + Q ++ GQL A + +RDLP AM A + H + AFLKRQ+N RK ALRK T+ R QL KAA A+ A R WE+G YFR V KE A A+ + AG L
Sbjct: 89 APPGTRGGARPGAGRPKGSYGRKRLPQAAQQLNDYLERGQLQCAQMVSRDLPGAMSDAVKEAHQQEEVYRPAXAFLKRQSN---SRKEALRKLTKHRSQLEKAAAASAACRSGWERGQDYFRAVIKECQSAVAVTSAGLNAGSL 229
BLAST of mRNA_M-pyrifera_M_contig13018.5822.1 vs. uniprot
Match: D7G1V5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1V5_ECTSI) HSP 1 Score: 82.8 bits (203), Expect = 2.760e-17 Identity = 53/97 (54.64%), Postives = 61/97 (62.89%), Query Frame = 1
Query: 163 MLQAQVHVDKRQADSDPAFLKRQANRGVCRKVALRKFTRARLQLRKAALAARARRENWEQGVAYFRGVEKEYLGASALL---------VSHAQAGKL 426
ML A VDK + D PAFLKRQ+NRGV RK ALRK + R QL KA+LA+ A + WE+G+ YFR V KE GA A VSHAQAGKL
Sbjct: 1 MLAASQEVDKHEKDWQPAFLKRQSNRGVGRKEALRKLAKHRSQLEKASLASAACKAGWEKGLEYFRAVAKECNGAVAATSAGLEETIDVSHAQAGKL 97
BLAST of mRNA_M-pyrifera_M_contig13018.5822.1 vs. uniprot
Match: A0A6H5JPF3_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPF3_9PHAE) HSP 1 Score: 79.3 bits (194), Expect = 1.510e-15 Identity = 44/83 (53.01%), Postives = 56/83 (67.47%), Query Frame = 1
Query: 1 TPPEKRGGIREGGGRPKGRYGGKKLRELLQTYKAAVKLGQLAHAHIAARDLPAAMLQAQVHVDKRQADSDPAFLKRQANRGVC 249
TPP KR G EG GRPKG +G K+LR +L Y+ ++LGQ+ + RDL +AML A V+K + D PAFLKRQ+NRGVC
Sbjct: 122 TPPPKRPGY-EGAGRPKGTFGRKRLRAMLDRYRERIELGQVTCGRLEVRDLSSAMLDAAQEVEKHEQDWRPAFLKRQSNRGVC 203
BLAST of mRNA_M-pyrifera_M_contig13018.5822.1 vs. uniprot
Match: A0A6H5JEX5_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEX5_9PHAE) HSP 1 Score: 73.2 bits (178), Expect = 2.390e-12 Identity = 42/82 (51.22%), Postives = 54/82 (65.85%), Query Frame = 1
Query: 1 TPPEKRGGIREGGGRPKGRYGGKKLRELLQTYKAAVKLGQLAHAHIAARDLPAAMLQAQVHVDKRQADSDPAFLKRQANRGV 246
TPP KR G EG GRPKG +G K+LR +L Y+ ++LGQ+ + RDL +AML A V+K + D PAFLKRQ+NR V
Sbjct: 122 TPPPKRPGY-EGAGRPKGTFGRKRLRAMLDRYRERIELGQVTCGRLEVRDLSSAMLDAAQEVEKHEQDWRPAFLKRQSNRDV 202
BLAST of mRNA_M-pyrifera_M_contig13018.5822.1 vs. uniprot
Match: A0A6H5LDJ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDJ5_9PHAE) HSP 1 Score: 69.7 bits (169), Expect = 4.620e-12 Identity = 46/81 (56.79%), Postives = 51/81 (62.96%), Query Frame = 1
Query: 211 PAFLKRQANRGVCRKVALRKFTRARLQLRKAALAARARRENWEQGVAYFRGVEKEYLGASAL---------LVSHAQAGKL 426
PAFLKRQ+NRGV RK ALRK + R QL KAA A+ A R WE+G YFR V KE A A+ LVSHAQAG L
Sbjct: 17 PAFLKRQSNRGVGRKEALRKLAKHRSQLEKAAAASAACRSGWERGQDYFRAVIKECQFAVAVSSAGLNESVLVSHAQAGSL 97 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig13018.5822.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig13018.5822.1 >prot_M-pyrifera_M_contig13018.5822.1 ID=prot_M-pyrifera_M_contig13018.5822.1|Name=mRNA_M-pyrifera_M_contig13018.5822.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=142bp TPPEKRGGIREGGGRPKGRYGGKKLRELLQTYKAAVKLGQLAHAHIAARDback to top mRNA from alignment at M-pyrifera_M_contig13018:8387..8812+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig13018.5822.1 ID=mRNA_M-pyrifera_M_contig13018.5822.1|Name=mRNA_M-pyrifera_M_contig13018.5822.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=426bp|location=Sequence derived from alignment at M-pyrifera_M_contig13018:8387..8812+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig13018:8387..8812+ >mRNA_M-pyrifera_M_contig13018.5822.1 ID=mRNA_M-pyrifera_M_contig13018.5822.1|Name=mRNA_M-pyrifera_M_contig13018.5822.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=852bp|location=Sequence derived from alignment at M-pyrifera_M_contig13018:8387..8812+ (Macrocystis pyrifera P11B4 male)back to top |