mRNA_M-pyrifera_M_contig1292.5784.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig1292.5784.1 vs. uniprot
Match: D7G910_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G910_ECTSI) HSP 1 Score: 199 bits (506), Expect = 1.870e-59 Identity = 91/148 (61.49%), Postives = 115/148 (77.70%), Query Frame = 2
Query: 149 RKPLAVGALSGLRFGPEPYLLEFHGANCDHCETMVPLMHKLFKIFRLNVKRHMVWEGTSNFRLMAAYDMETGCKGLPFFYNRRTNKAICGATTWTNFRNWALCRDCKAFLPPTLTPEQEEEAKPKKMKQDSILERMKAKAAGRQKAKP 592
R P+AVGALSGLR G EP+LLEFHG CDHCE M PL +LF RL VKRHMVWE T+NFRLM+ YD+++ C+GLPFFYNRRT + ICGATTW+NF+NWAL R+CK+ PP +T EQ+E+A+ KK++QD + R+K G ++A P
Sbjct: 31 RTPMAVGALSGLRIGLEPHLLEFHGEQCDHCEAMKPLFRRLFLETRLVVKRHMVWEDTANFRLMSIYDLKSRCRGLPFFYNRRTGQTICGATTWSNFKNWALDRNCKSSSPPRMTGEQQEDAREKKLEQDPLFSRLKKGLGGDKEATP 178
BLAST of mRNA_M-pyrifera_M_contig1292.5784.1 vs. uniprot
Match: M2W7T7_GALSU (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2W7T7_GALSU) HSP 1 Score: 113 bits (282), Expect = 3.170e-26 Identity = 58/138 (42.03%), Postives = 79/138 (57.25%), Query Frame = 2
Query: 197 EPYLLEFHGANCDHCETMVPLMHKLFKIFRLNVKRHMVWEGTSNFRLMAAYDMETGCKGLPFFYNRRTNKAICGATTWTNFRNWALCRDCKAFLPPTLTPEQEEEAKPKKMKQDSILERMKAKAAGR--QKAKPKIDG 604
EPYLLEFHG CDHC M+PL+HK+ K + + + VW N RL+ D + C G+PFFYNR + + ICGATT+ N +WA C FLPP QEE+ + S ER+++K R +++KP G
Sbjct: 12 EPYLLEFHGTECDHCVDMLPLVHKIEKELGVTMLKLEVWHNPRNNRLLQKLDSSSVCGGVPFFYNRISRQFICGATTYKNLLSWAKSEGCAPFLPPETAQGQEED------RSKSAFERLRSKGMERLQERSKPIAPG 143
BLAST of mRNA_M-pyrifera_M_contig1292.5784.1 vs. uniprot
Match: A0A5J4YT87_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YT87_PORPP) HSP 1 Score: 102 bits (254), Expect = 4.800e-22 Identity = 47/103 (45.63%), Postives = 63/103 (61.17%), Query Frame = 2
Query: 203 YLLEFHGANCDHCETMVPLMHKLFKIFRLNVKRHMVWEGTSNFRLMAAYDMETGCKGLPFFYNRRTNKAICGATTWTNFRNWALCRDCKAFLPPTLTPEQEEE 511
+LLEF+G CDHC M P++ +L L ++R VW N RL+ D C G+PFFYN++T ICGATT+ NF+NWA + + FLPP E+EEE
Sbjct: 11 HLLEFYGIECDHCVDMEPVIEQLKHETGLTMRRFEVWYNDDNLRLLQRLDTNGRCGGVPFFYNKKTQYWICGATTYANFKNWAEDKPAERFLPPPKEGEEEEE 113
BLAST of mRNA_M-pyrifera_M_contig1292.5784.1 vs. uniprot
Match: A0A7S3F257_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3F257_9EUKA) HSP 1 Score: 97.4 bits (241), Expect = 2.240e-20 Identity = 42/98 (42.86%), Postives = 62/98 (63.27%), Query Frame = 2
Query: 191 GPEPYLLEFHGANCDHCETMVPLMHKLFKIFRLNVKRHMVWEGTSNFRLMAAYDMETGCKGLPFFYNRRTNKAICGATTWTNFRNWALCRDCKAFLPP 484
G +PYL++F G D+C++M PL +L + ++ VW GT N L+ D C G+PFFYN+++ + ICGATT+ N + WALC+ C+ FLPP
Sbjct: 54 GGKPYLIQFTGKGDDYCKSMEPLKERLKDELGVEIRCFEVWYGTQNLDLLQKLDRGR-CGGVPFFYNKKSRRFICGATTYANLKAWALCQPCEPFLPP 150
BLAST of mRNA_M-pyrifera_M_contig1292.5784.1 vs. uniprot
Match: A0A0G4GZN7_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GZN7_VITBC) HSP 1 Score: 97.1 bits (240), Expect = 6.660e-20 Identity = 44/102 (43.14%), Postives = 65/102 (63.73%), Query Frame = 2
Query: 197 EPYLLEFHGANCDHCETMVPLMHKLFKIFRLNVKRHMVWEGTSNFRLMAAYDMETGCKGLPFFYNRRTNKAICGATTWTNFRNWALCRDCKAFLPPTLTPEQ 502
EPYLLEFH +CD CE M P++ ++ + ++R V+ N+ L+ D + C GLP++YNRRTNK ICGATT++NF+ +A + +A L P PE+
Sbjct: 42 EPYLLEFHSIDCDQCEDMEPVLRRVERELHTKIERLEVYLHPVNWDLLQKLDKKARCGGLPYYYNRRTNKYICGATTYSNFKAFAEGKPSRANLAPPAKPEE 143
BLAST of mRNA_M-pyrifera_M_contig1292.5784.1 vs. uniprot
Match: A0A0M0JSC9_9EUKA (Uncharacterized protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JSC9_9EUKA) HSP 1 Score: 96.3 bits (238), Expect = 7.920e-20 Identity = 47/127 (37.01%), Postives = 74/127 (58.27%), Query Frame = 2
Query: 197 EPYLLEFHGANCDHCETMVPLMHKLFKIFRLNVKRHMVWEGTSNFRLMAAYDMETGCKGLPFFYNRRTNKAICGATTWTNFRNWALCRDCKAFLPPTLTPEQEEEAKPKKMKQDSILERMKAKAAGR 577
+PYL++F G D+C M PL +L + + ++ VW + N L+ D C G+PFFYN+R+ + ICGATT+ N +NWA+C C+ FLPP + +E+ + K K S L+++ + GR
Sbjct: 66 KPYLIQFKGKGDDYCAQMEPLKDQLREELGVEIRCFEVWYNSKNLELLQRLDRGR-CGGVPFFYNKRSRRYICGATTYANLKNWAMCEPCEPFLPPPNINQDKEQEQNKVQKFFSNLKQLADEKLGR 191
BLAST of mRNA_M-pyrifera_M_contig1292.5784.1 vs. uniprot
Match: A0A7S2N4S1_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2N4S1_9EUKA) HSP 1 Score: 94.4 bits (233), Expect = 5.630e-19 Identity = 41/96 (42.71%), Postives = 60/96 (62.50%), Query Frame = 2
Query: 197 EPYLLEFHGANCDHCETMVPLMHKLFKIFRLNVKRHMVWEGTSNFRLMAAYDMETGCKGLPFFYNRRTNKAICGATTWTNFRNWALCRDCKAFLPP 484
+PYL++F G D+C+ M PL +L + L+++ VW + N L+ D C G+PFFYN+R+ + ICGATT+ N + WALC C+ FLPP
Sbjct: 78 KPYLIQFRGKGDDYCKQMEPLKEQLREELGLDIRCFEVWYESKNLELLQRLDRGR-CGGVPFFYNKRSRRFICGATTYDNLKAWALCEPCEPFLPP 172
BLAST of mRNA_M-pyrifera_M_contig1292.5784.1 vs. uniprot
Match: A0A7S4BKL1_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BKL1_CHRCT) HSP 1 Score: 94.4 bits (233), Expect = 5.630e-19 Identity = 53/145 (36.55%), Postives = 78/145 (53.79%), Query Frame = 2
Query: 185 RFGPEPYLLEFHGANCDHCETMVPLMHKLFKIFRLNVKRHMVWEGTSNFRLMAAYDMETGCKGLPFFYNRRTNKAICGATTWTNFRNWALCRDCKAFLPPT--LTPEQEEEAKPKKMKQDSILERMKAKAAGRQKAKPKIDGYDE 613
R P+LL+F G D+C M PL +LF+ + ++ VW+ T N L+ +D C G+PFFYN+RT + ICGATT+ N R WAL C FL P + +Q E+ + +K Q + K KA R+K +D ++
Sbjct: 75 RAATTPHLLQFKGRGDDYCAMMEPLKDRLFEEHGVRIRCFEVWQDTKNLELLRIFD-NGRCGGVPFFYNKRTKRWICGATTYDNLRKWALDEMCDPFLAPRELIEKQQNEQGEMQKNIQQFV---QKIKATAREKMGLSVDDDED 215
BLAST of mRNA_M-pyrifera_M_contig1292.5784.1 vs. uniprot
Match: A0A7S0LAB2_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LAB2_9EUKA) HSP 1 Score: 87.8 bits (216), Expect = 1.600e-16 Identity = 45/121 (37.19%), Postives = 71/121 (58.68%), Query Frame = 2
Query: 200 PYLLEFHGANCDHCETMVPLMHKLFKIFRLNVKRHMVWEGTSNFRLMAAYDMETGCKGLPFFYNRRTNKAICGATTWTNFRNWALCRDCKAFLPPT-LTPEQEEEAKPKKMKQDSILERMK 559
P+LL+F G N D+C M PL +L + L ++ VW N L+ +D C G+P+F+N++T + ICGATT+ N + WAL C+ FLPP L +Q++E + K ++E++K
Sbjct: 90 PHLLQFKGRNDDYCALMEPLKVQLAEECGLQIRCFEVWHDAKNLELLRIFDSGR-CGGVPYFFNKKTKRWICGATTYENLKAWALDEVCEPFLPPKELVEKQQQEKSEFQNKFQQLVEKVK 209
BLAST of mRNA_M-pyrifera_M_contig1292.5784.1 vs. uniprot
Match: A0A554K3B1_9BACT (Thioredoxin domain-containing protein n=1 Tax=Parcubacteria group bacterium Gr01-1014_30 TaxID=2017182 RepID=A0A554K3B1_9BACT) HSP 1 Score: 83.2 bits (204), Expect = 2.690e-16 Identity = 37/82 (45.12%), Postives = 51/82 (62.20%), Query Frame = 2
Query: 206 LLEFHGANCDHCETMVPLMHKLFKIFRLNVKRHMVWEGTSNFRLMAAYDMETGCKGLPFFYNRRTNKAICGATTWTNFRNWA 451
L+EF+G C HC M PL+ KL K L ++R VW T N +M D + C G+PFFYN++ NK ICG+T++ F+ WA
Sbjct: 5 LIEFYGTECVHCREMEPLIEKLEKEEGLKIERLEVWHNTDNLNIMRELD-KGYCGGVPFFYNKKANKWICGSTSYEKFKEWA 85 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1292.5784.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig1292.5784.1 >prot_M-pyrifera_M_contig1292.5784.1 ID=prot_M-pyrifera_M_contig1292.5784.1|Name=mRNA_M-pyrifera_M_contig1292.5784.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=191bp MFFRRLLATISCVASVASAARGRTDVNGRVGWARKPLAVGALSGLRFGPEback to top mRNA from alignment at M-pyrifera_M_contig1292:2231..6589- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig1292.5784.1 ID=mRNA_M-pyrifera_M_contig1292.5784.1|Name=mRNA_M-pyrifera_M_contig1292.5784.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=4359bp|location=Sequence derived from alignment at M-pyrifera_M_contig1292:2231..6589- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig1292:2231..6589- >mRNA_M-pyrifera_M_contig1292.5784.1 ID=mRNA_M-pyrifera_M_contig1292.5784.1|Name=mRNA_M-pyrifera_M_contig1292.5784.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1146bp|location=Sequence derived from alignment at M-pyrifera_M_contig1292:2231..6589- (Macrocystis pyrifera P11B4 male)back to top |