mRNA_M-pyrifera_M_contig128554.5736.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig128554.5736.1 vs. uniprot
Match: A0A497BNK0_9CHLR (PAS domain S-box protein (Fragment) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A497BNK0_9CHLR) HSP 1 Score: 145 bits (366), Expect = 2.120e-42 Identity = 69/112 (61.61%), Postives = 80/112 (71.43%), Query Frame = 1
Query: 1 PVVRGDAGQLHRLLQNLIGNAIKYHGSERPCIRVYTETRDDDTVFCVRDNGIGIDVEQSDRVFEIFQRLHSRADYPGTGIGLSVCKRIVERHGGRIWFEPAPDGGTVFCFTL 336
P V D GQL +LLQNL+GNA+K+ G E P + V E + D VF VRDNGIGID +R+F IFQRLH R +YPGTGIGL+VCK+IVERHGGRIW E P G F FTL
Sbjct: 39 PTVMADGGQLVQLLQNLVGNAVKFRGEEPPRVHVGVEEKADAWVFSVRDNGIGIDPASCERIFLIFQRLHGRGEYPGTGIGLAVCKKIVERHGGRIWVESQPGQGATFFFTL 150
BLAST of mRNA_M-pyrifera_M_contig128554.5736.1 vs. uniprot
Match: A0A841GYM0_9BACT (PAS domain S-box-containing protein n=1 Tax=Longimicrobium terrae TaxID=1639882 RepID=A0A841GYM0_9BACT) HSP 1 Score: 152 bits (383), Expect = 2.910e-41 Identity = 72/112 (64.29%), Postives = 86/112 (76.79%), Query Frame = 1
Query: 1 PVVRGDAGQLHRLLQNLIGNAIKYHGSERPCIRVYTETRDDDTVFCVRDNGIGIDVEQSDRVFEIFQRLHSRADYPGTGIGLSVCKRIVERHGGRIWFEPAPDGGTVFCFTL 336
PVV GDA QL ++LQNL+ NA+K+HG P + V E + V VRDNGIGI E + R+F IFQRLH+RA+YPGTGIGLS+CK+IVERHGGRIW E APDGG+VF FTL
Sbjct: 430 PVVTGDAVQLGQVLQNLVANAVKFHGDAPPRVHVGAERNGAEWVIRVRDNGIGIAPEYAQRIFVIFQRLHTRAEYPGTGIGLSICKKIVERHGGRIWVESAPDGGSVFSFTL 541
BLAST of mRNA_M-pyrifera_M_contig128554.5736.1 vs. uniprot
Match: A0A842XL01_9EURY (GHKL domain-containing protein n=1 Tax=Methanophagales archaeon TaxID=2056316 RepID=A0A842XL01_9EURY) HSP 1 Score: 149 bits (376), Expect = 3.580e-41 Identity = 68/112 (60.71%), Postives = 85/112 (75.89%), Query Frame = 1
Query: 1 PVVRGDAGQLHRLLQNLIGNAIKYHGSERPCIRVYTETRDDDTVFCVRDNGIGIDVEQSDRVFEIFQRLHSRADYPGTGIGLSVCKRIVERHGGRIWFEPAPDGGTVFCFTL 336
P+V DA QL +L QNLIGNAIK+HG E P + V E + ++ VF VRDNGIGID + +DR+F+IFQRLH+R +YPGTGIGL++CK+IVERHGG IW E P G F FT+
Sbjct: 270 PIVMADALQLTQLFQNLIGNAIKFHGEEPPSVHVSVEQKGNEWVFSVRDNGIGIDPKYADRIFKIFQRLHNRREYPGTGIGLAICKKIVERHGGHIWVESQPGKGAAFYFTI 381
BLAST of mRNA_M-pyrifera_M_contig128554.5736.1 vs. uniprot
Match: UPI001AC6F8BB (Partial two-component system, chemotaxis family, sensor kinase Cph1 n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=UPI001AC6F8BB) HSP 1 Score: 143 bits (360), Expect = 4.740e-41 Identity = 67/112 (59.82%), Postives = 81/112 (72.32%), Query Frame = 1
Query: 1 PVVRGDAGQLHRLLQNLIGNAIKYHGSERPCIRVYTETRDDDTVFCVRDNGIGIDVEQSDRVFEIFQRLHSRADYPGTGIGLSVCKRIVERHGGRIWFEPAPDGGTVFCFTL 336
P V D GQL +L QNLI NAIK+ G+E P I V + + V VRDNGIGID + +RVFEIFQRLH+R +YPGTGIGL++CK+I ERHGGRIWFE P G+ F FT+
Sbjct: 77 PTVMADGGQLTQLFQNLIANAIKFRGAELPRIHVSARQDNQEWVLTVRDNGIGIDSQYRERVFEIFQRLHTRREYPGTGIGLAICKKIAERHGGRIWFESEPGKGSTFYFTI 188
BLAST of mRNA_M-pyrifera_M_contig128554.5736.1 vs. uniprot
Match: L9XYS1_9EURY (Multi-sensor signal transduction histidine kinase n=1 Tax=Natrinema versiforme JCM 10478 TaxID=1227496 RepID=L9XYS1_9EURY) HSP 1 Score: 140 bits (354), Expect = 3.230e-40 Identity = 65/112 (58.04%), Postives = 81/112 (72.32%), Query Frame = 1
Query: 1 PVVRGDAGQLHRLLQNLIGNAIKYHGSERPCIRVYTETRDDDTVFCVRDNGIGIDVEQSDRVFEIFQRLHSRADYPGTGIGLSVCKRIVERHGGRIWFEPAPDGGTVFCFTL 336
P V+GD GQL +L QNL+ NAI+Y G E P +RV E + V VRD GIG+D EQ+DRVFE+FQRLH++ ++ GTGIGL++CKRIVERHGG IW + P GT F TL
Sbjct: 71 PCVKGDRGQLRQLFQNLLDNAIQYSGDEPPSVRVSAEDDGSEWVVSVRDEGIGMDPEQTDRVFEVFQRLHTQDEHSGTGIGLAICKRIVERHGGEIWIDSVPGEGTTFSLTL 182
BLAST of mRNA_M-pyrifera_M_contig128554.5736.1 vs. uniprot
Match: UPI001C3F35A5 (ATP-binding protein n=1 Tax=Methylogaea oryzae TaxID=1295382 RepID=UPI001C3F35A5) HSP 1 Score: 138 bits (347), Expect = 5.500e-40 Identity = 65/112 (58.04%), Postives = 80/112 (71.43%), Query Frame = 1
Query: 1 PVVRGDAGQLHRLLQNLIGNAIKYHGSERPCIRVYTETRDDDTVFCVRDNGIGIDVEQSDRVFEIFQRLHSRADYPGTGIGLSVCKRIVERHGGRIWFEPAPDGGTVFCFTL 336
P V GDA QL +LLQNLIGNAIK+ G P +++ + F VRDNGIG+ E ++R+F IFQRLH++ YPGTGIGL++CK+IVERHGGRIW E P G FCFTL
Sbjct: 2 PTVTGDASQLTQLLQNLIGNAIKFRGDAAPRVQLTVTPEEKAWRFEVRDNGIGLAPEFAERIFVIFQRLHTKEQYPGTGIGLAICKKIVERHGGRIWVESEPGQGAAFCFTL 113
BLAST of mRNA_M-pyrifera_M_contig128554.5736.1 vs. uniprot
Match: A0A2U1RPV8_9BACT (Histidine kinase domain-containing protein n=1 Tax=candidate division NC10 bacterium TaxID=2072417 RepID=A0A2U1RPV8_9BACT) HSP 1 Score: 144 bits (363), Expect = 7.420e-40 Identity = 65/112 (58.04%), Postives = 82/112 (73.21%), Query Frame = 1
Query: 1 PVVRGDAGQLHRLLQNLIGNAIKYHGSERPCIRVYTETRDDDTVFCVRDNGIGIDVEQSDRVFEIFQRLHSRADYPGTGIGLSVCKRIVERHGGRIWFEPAPDGGTVFCFTL 336
P V GDA QL RL QNLI NAIK+ G E P + + E +D + +F VRDNGIG++ + +R+F IFQRLH R +YPGTGIGL++C+RIVERHGGRIW E P G+ F FT+
Sbjct: 222 PAVMGDASQLMRLFQNLIDNAIKFAGEEAPRVHIAAEQKDGEWLFSVRDNGIGVEPQYKERIFVIFQRLHGRDEYPGTGIGLAICRRIVERHGGRIWMESEPGKGSTFYFTI 333
BLAST of mRNA_M-pyrifera_M_contig128554.5736.1 vs. uniprot
Match: A0A7V5WH43_9DELT (Histidine kinase n=1 Tax=Desulfobacteraceae bacterium TaxID=2049433 RepID=A0A7V5WH43_9DELT) HSP 1 Score: 149 bits (376), Expect = 1.750e-39 Identity = 66/112 (58.93%), Postives = 84/112 (75.00%), Query Frame = 1
Query: 1 PVVRGDAGQLHRLLQNLIGNAIKYHGSERPCIRVYTETRDDDTVFCVRDNGIGIDVEQSDRVFEIFQRLHSRADYPGTGIGLSVCKRIVERHGGRIWFEPAPDGGTVFCFTL 336
PVV D QL+ LLQNL+ NA+K+ G E P I +++ DD V CVRDNGIGID +DR+F IFQRLH R++Y GTG+GL++CK+IVERHGGRIW + GG++FCFTL
Sbjct: 1305 PVVHADRTQLNHLLQNLLANALKFRGEEPPRIHIFSRREKDDWVVCVRDNGIGIDPRHADRIFLIFQRLHRRSEYEGTGVGLAICKKIVERHGGRIWVQSEQTGGSLFCFTL 1416
BLAST of mRNA_M-pyrifera_M_contig128554.5736.1 vs. uniprot
Match: A0A2V8VHH1_9BACT (Hybrid sensor histidine kinase/response regulator n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8VHH1_9BACT) HSP 1 Score: 145 bits (366), Expect = 2.230e-39 Identity = 72/112 (64.29%), Postives = 81/112 (72.32%), Query Frame = 1
Query: 1 PVVRGDAGQLHRLLQNLIGNAIKYHGSERPCIRVYTETRDDDTVFCVRDNGIGIDVEQSDRVFEIFQRLHSRADYPGTGIGLSVCKRIVERHGGRIWFEPAPDGGTVFCFTL 336
PVVRGDA QL LLQNLIGNAIK+ G E P I V E + +F VRDNGIGI+ +RVF IFQRLH+R YPGTGIGLS+CK+IVERHGGRIW E P G F FT+
Sbjct: 324 PVVRGDAIQLATLLQNLIGNAIKFRGEEAPTIHVAAERSGPEWLFSVRDNGIGIEPRFLERVFVIFQRLHTRESYPGTGIGLSICKKIVERHGGRIWVESQPGRGATFRFTM 435
BLAST of mRNA_M-pyrifera_M_contig128554.5736.1 vs. uniprot
Match: A0A6H1TT79_9CYAN (PAS domain S-box protein n=3 Tax=Cyanobacteria TaxID=1117 RepID=A0A6H1TT79_9CYAN) HSP 1 Score: 149 bits (375), Expect = 2.410e-39 Identity = 69/112 (61.61%), Postives = 82/112 (73.21%), Query Frame = 1
Query: 1 PVVRGDAGQLHRLLQNLIGNAIKYHGSERPCIRVYTETRDDDTVFCVRDNGIGIDVEQSDRVFEIFQRLHSRADYPGTGIGLSVCKRIVERHGGRIWFEPAPDGGTVFCFTL 336
P + GDA QL RLLQNLI NAIKY G P + V +D VF +RDNGIGID + DR+F IFQRLH+R +YPGTGIGL++CK+IVERHGGRIW E P G++F FTL
Sbjct: 1826 PAIVGDAKQLARLLQNLISNAIKYRGERSPAVHVSARRQDRTWVFSIRDNGIGIDPKHHDRIFTIFQRLHTREEYPGTGIGLAICKKIVERHGGRIWVESEPGEGSIFYFTL 1937 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig128554.5736.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig128554.5736.1 >prot_M-pyrifera_M_contig128554.5736.1 ID=prot_M-pyrifera_M_contig128554.5736.1|Name=mRNA_M-pyrifera_M_contig128554.5736.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=112bp PVVRGDAGQLHRLLQNLIGNAIKYHGSERPCIRVYTETRDDDTVFCVRDNback to top mRNA from alignment at M-pyrifera_M_contig128554:56..391+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig128554.5736.1 ID=mRNA_M-pyrifera_M_contig128554.5736.1|Name=mRNA_M-pyrifera_M_contig128554.5736.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=336bp|location=Sequence derived from alignment at M-pyrifera_M_contig128554:56..391+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig128554:56..391+ >mRNA_M-pyrifera_M_contig128554.5736.1 ID=mRNA_M-pyrifera_M_contig128554.5736.1|Name=mRNA_M-pyrifera_M_contig128554.5736.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=672bp|location=Sequence derived from alignment at M-pyrifera_M_contig128554:56..391+ (Macrocystis pyrifera P11B4 male)back to top |